View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0444_high_9 (Length: 283)

Name: NF0444_high_9
Description: NF0444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0444_high_9
NF0444_high_9
[»] chr7 (6 HSPs)
chr7 (52-243)||(46706519-46706711)
chr7 (52-243)||(5310796-5310988)
chr7 (52-243)||(5315510-5315702)
chr7 (52-243)||(5284707-5284899)
chr7 (52-243)||(5289228-5289420)
chr7 (52-243)||(5302895-5303087)
[»] chr1 (3 HSPs)
chr1 (52-243)||(44133178-44133370)
chr1 (52-243)||(44128973-44129165)
chr1 (52-243)||(44141600-44141792)
[»] chr5 (7 HSPs)
chr5 (62-243)||(1478398-1478580)
chr5 (62-243)||(1482592-1482774)
chr5 (56-243)||(1492567-1492755)
chr5 (52-243)||(1505376-1505568)
chr5 (136-243)||(1509523-1509630)
chr5 (56-236)||(1499646-1499827)
chr5 (62-236)||(1487076-1487251)
[»] chr3 (2 HSPs)
chr3 (86-235)||(37862955-37863105)
chr3 (86-235)||(37858929-37859079)
[»] chr2 (1 HSPs)
chr2 (62-236)||(24163331-24163506)
[»] chr8 (1 HSPs)
chr8 (133-209)||(35251251-35251327)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 52 - 243
Target Start/End: Original strand, 46706519 - 46706711
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46706519 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttagaaggtggaatgttagtccagct 46706618  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  46706619 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgaagtccaaaccatctcaaatataggtttctcaatttctggt 46706711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5310988 - 5310796
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||||||||| | |||||||||||| |||||||||  |||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||    
T  5310988 agaaattcccaatggctcgaaagcctcaaccaatgctttagtaatgttctttgagacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 5310889  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5310888 tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt 5310796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5315702 - 5315510
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||||||||| | |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  5315702 agaaattcccaatggctcgaaagcctcaaccaatgctttagtaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 5315603  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5315602 tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctctatttctggt 5315510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5284899 - 5284707
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||||||||| |  ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  5284899 agaaattcccaatggctcaaaagcctcaaccaatgctttagtaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 5284800  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  5284799 tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtctctcaatttctggt 5284707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 52 - 243
Target Start/End: Original strand, 5289228 - 5289420
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||||||||| | |||||||||||| |||||||||   |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  5289228 agaaattcccaatggctcgaaagcctcaaccaatgctttagtgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 5289327  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5289328 tcacgaaggtggccatcaatggctccttcactatccggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt 5289420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5303087 - 5302895
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||||| ||| |  ||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  5303087 agaaattcccagtggctcaaaagcgtcaaccaatgctttagtaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 5302988  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5302987 tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt 5302895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 9e-79; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 44133370 - 44133178
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  44133370 agaaattcctaatggttcgaaagcctcaaccaatgctttattgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 44133271  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  44133270 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggt 44133178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 44129165 - 44128973
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||| ||||||| |||||||||||| || |||||||  |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  44129165 agaaattcctaatggttcgaaagcctcaaccaaagctttattgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 44129066  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  44129065 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggt 44128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 44141792 - 44141600
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  44141792 agaaattcctaatggttcgaaagcctcaaccaatgctttattgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct 44141693  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  44141692 tcacgaaggtgaccgtcaatggccccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggt 44141600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 4e-75; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 1478580 - 1478398
Alignment:
Q  62 aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagcttcacgaaggt 160  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||    
T  1478580 aatggttggaaagcctcgaccaatgctttatcaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagaccagcttcacgaaggt 1478481  T
Q  161 gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1478480 gaccatcaatggctccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt 1478398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 1482774 - 1482592
Alignment:
Q  62 aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagcttcacgaaggt 160  Q
    |||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||||| |    
T  1482774 aatggttggaaagcatcgatcaatgctttatcaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagaccagcttcacgaagat 1482675  T
Q  161 gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1482674 gaccgtcaatggccccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt 1482592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 1492755 - 1492567
Alignment:
Q  56 attcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagcttcac 154  Q
    |||||||||||||||||||||||||||||||||||||  || || ||||| |||||||||||||||||||| ||| |||| |||||||  ||||||||||    
T  1492755 attcccaatggttggaaagcctcaactaatgctttatttatattttttgacacaatcccaggaacatctttaagaaggtgaaatgttaacccagcttcac 1492656  T
Q  155 gaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||    
T  1492655 gaagatgaccatcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggt 1492567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 1505568 - 1505376
Alignment:
Q  52 agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct 150  Q
    ||||| ||| |||||||||||||| ||||| ||||||||||  |||||||||||||||||  ||||||||||||| ||| |||| |||||||||||||||    
T  1505568 agaaactcctaatggttggaaagcatcaaccaatgctttattgatgttctttgaaacaatttcaggaacatctttaagaaggtgaaatgttagtccagct 1505469  T
Q  151 tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt 243  Q
    |||||||||||||| |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1505468 tcacgaaggtgaccgtcaatggctccttcgctatcaggcgcgattgtttgtgcagtccaaaccatttcaaatataggtttctcaatttctggt 1505376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 1509630 - 1509523
Alignment:
Q  136 aatgttagtccagcttcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaa 235  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1509630 aatgttagtccaacttcacgaaggtgaccgtcaatggcaccttcactatttggagcaattgtttgtgcagtccaaaccatctcaaatatagatttctcaa 1509531  T
Q  236 tctctggt 243  Q
    | ||||||    
T  1509530 tttctggt 1509523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 236
Target Start/End: Complemental strand, 1499827 - 1499646
Alignment:
Q  56 attcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttagaggtgga-atgttagtccagcttcac 154  Q
    ||||| |||||||| || |||||||||| | |||||||||| |||||||| |||||| |||  ||||| ||  ||     | ||||||| ||| ||||||    
T  1499827 attcctaatggttgaaatgcctcaactagtactttatcaatattctttgagacaatctcagagacatccttacgaatattatatgttagcccaacttcac 1499728  T
Q  155 gaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat 236  Q
    |||| ||||||  ||| |||||||||||||| | |||||||||||||||||||||||| | |||||||| ||||||||||||    
T  1499727 gaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgcagtccaaactaactcaaataaaggtttctcaat 1499646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 236
Target Start/End: Complemental strand, 1487251 - 1487076
Alignment:
Q  62 aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttagagg-tggaatgttagtccagcttcacgaaggt 160  Q
    ||||||||||| |||| ||||| | ||||||| ||||||||||| | |||  |||| ||||||||  || | |  |||||||||||| |||||||||| |    
T  1487251 aatggttggaatgccttaactagttctttatcgatgttctttgagataatttcagggacatctttacgaagattaaatgttagtccaacttcacgaagtt 1487152  T
Q  161 gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat 236  Q
    | ||   ||| ||| ||||||||||| |||| |||||||||||||||||||| | |||||| | ||||||||||||    
T  1487151 ggccgctaattgcttcttcactatctagagctattgtttgtgcagtccaaacaagctcaaagagaggtttctcaat 1487076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 37862955 - 37863105
Alignment:
Q  86 gctttatcaatgttctttgaaacaatcccaggaacatcttttag-aggtggaatgttagtccagcttcacgaaggtgaccatcaatggctccttcactat 184  Q
    ||||| |||||||||||||| ||||  ||||||||||| || || || |||||||| ||||| ||||| ||||||||||||||||| |||||||||||||    
T  37862955 gctttctcaatgttctttgagacaaggccaggaacatccttgaggagatggaatgtcagtcctgcttctcgaaggtgaccatcaatagctccttcactat 37863054  T
Q  185 ctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaa 235  Q
    ||||| | ||||||||||||||||||||||  ||||| | ||| |||||||    
T  37863055 ctggaacgattgtttgtgcagtccaaaccaattcaaacaaaggcttctcaa 37863105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 37858929 - 37859079
Alignment:
Q  86 gctttatcaatgttctttgaaacaatcccaggaacatcttttag-aggtggaatgttagtccagcttcacgaaggtgaccatcaatggctccttcactat 184  Q
    ||||| |||||||||||||| | ||  ||||||||||| || || || |||||||| || ||  |||||||||||||||| ||||| |||||||||||||    
T  37858929 gctttctcaatgttctttgagataagaccaggaacatccttgaggagatggaatgtaagcccgacttcacgaaggtgaccgtcaattgctccttcactat 37859028  T
Q  185 ctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaa 235  Q
    |||||   || |||||||||||||| ||||  ||||| |  ||||||||||    
T  37859029 ctggaaggatcgtttgtgcagtccataccaattcaaacaagggtttctcaa 37859079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 236
Target Start/End: Original strand, 24163331 - 24163506
Alignment:
Q  62 aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatctttt-agaggtggaatgttagtccagcttcacgaaggt 160  Q
    ||||||||||| |||||||  |||||||||||||| |||||||| |||||  | |||||||| ||  | || || |||| ||| |||  ||||||||| |    
T  24163331 aatggttggaatgcctcaaacaatgctttatcaatattctttgagacaatgtctggaacatccttacaaagatgaaatgatagcccaaattcacgaagtt 24163430  T
Q  161 gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat 236  Q
    | |||  ||| ||||||||||||| |||||| ||||||||||| |||||||| | |||||||| ||||||||||||    
T  24163431 ggccacaaatagctccttcactatttggagcgattgtttgtgctgtccaaactaactcaaatagaggtttctcaat 24163506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 35251327 - 35251251
Alignment:
Q  133 tggaatgttagtccagcttcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtcca 209  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||| |||||| |||   |||||||||||||||||    
T  35251327 tggaatgttagtccaacctcacgaaggtgaccatcaatagctccttgactatcaggaaggattgtttgtgcagtcca 35251251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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