View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0444_low_13 (Length: 283)
Name: NF0444_low_13
Description: NF0444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0444_low_13 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 52 - 243
Target Start/End: Original strand, 46706519 - 46706711
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
46706519 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttagaaggtggaatgttagtccagct |
46706618 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
46706619 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgaagtccaaaccatctcaaatataggtttctcaatttctggt |
46706711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5310988 - 5310796
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||||||||| | |||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
5310988 |
agaaattcccaatggctcgaaagcctcaaccaatgctttagtaatgttctttgagacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
5310889 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5310888 |
tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt |
5310796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5315702 - 5315510
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
5315702 |
agaaattcccaatggctcgaaagcctcaaccaatgctttagtaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
5315603 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
5315602 |
tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctctatttctggt |
5315510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5284899 - 5284707
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
5284899 |
agaaattcccaatggctcaaaagcctcaaccaatgctttagtaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
5284800 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
5284799 |
tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtctctcaatttctggt |
5284707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 52 - 243
Target Start/End: Original strand, 5289228 - 5289420
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
5289228 |
agaaattcccaatggctcgaaagcctcaaccaatgctttagtgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
5289327 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5289328 |
tcacgaaggtggccatcaatggctccttcactatccggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt |
5289420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 5303087 - 5302895
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||||| ||| | ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
5303087 |
agaaattcccagtggctcaaaagcgtcaaccaatgctttagtaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
5302988 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5302987 |
tcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt |
5302895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 149; Significance: 9e-79; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 44133370 - 44133178
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
44133370 |
agaaattcctaatggttcgaaagcctcaaccaatgctttattgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
44133271 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
44133270 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggt |
44133178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 44129165 - 44128973
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||| ||||||| |||||||||||| || ||||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
44129165 |
agaaattcctaatggttcgaaagcctcaaccaaagctttattgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
44129066 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
44129065 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggt |
44128973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 44141792 - 44141600
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
44141792 |
agaaattcctaatggttcgaaagcctcaaccaatgctttattgatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagtccagct |
44141693 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
44141692 |
tcacgaaggtgaccgtcaatggccccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaatttctggt |
44141600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 143; Significance: 4e-75; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 1478580 - 1478398
Alignment:
| Q |
62 |
aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagcttcacgaaggt |
160 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||||||| |
|
|
| T |
1478580 |
aatggttggaaagcctcgaccaatgctttatcaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagaccagcttcacgaaggt |
1478481 |
T |
|
| Q |
161 |
gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1478480 |
gaccatcaatggctccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt |
1478398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 1482774 - 1482592
Alignment:
| Q |
62 |
aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagcttcacgaaggt |
160 |
Q |
| |
|
|||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||||| | |
|
|
| T |
1482774 |
aatggttggaaagcatcgatcaatgctttatcaatgttctttgaaacaatcccaggaacatctttaagaaggtgaaatgttagaccagcttcacgaagat |
1482675 |
T |
|
| Q |
161 |
gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1482674 |
gaccgtcaatggccccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatttctggt |
1482592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 243
Target Start/End: Complemental strand, 1492755 - 1492567
Alignment:
| Q |
56 |
attcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagcttcac |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||| ||| |||| ||||||| |||||||||| |
|
|
| T |
1492755 |
attcccaatggttggaaagcctcaactaatgctttatttatattttttgacacaatcccaggaacatctttaagaaggtgaaatgttaacccagcttcac |
1492656 |
T |
|
| Q |
155 |
gaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||| |
|
|
| T |
1492655 |
gaagatgaccatcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaatttctggt |
1492567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 1505568 - 1505376
Alignment:
| Q |
52 |
agaaattcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttaga-ggtggaatgttagtccagct |
150 |
Q |
| |
|
||||| ||| |||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
1505568 |
agaaactcctaatggttggaaagcatcaaccaatgctttattgatgttctttgaaacaatttcaggaacatctttaagaaggtgaaatgttagtccagct |
1505469 |
T |
|
| Q |
151 |
tcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaatctctggt |
243 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
1505468 |
tcacgaaggtgaccgtcaatggctccttcgctatcaggcgcgattgtttgtgcagtccaaaccatttcaaatataggtttctcaatttctggt |
1505376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 1509630 - 1509523
Alignment:
| Q |
136 |
aatgttagtccagcttcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaa |
235 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1509630 |
aatgttagtccaacttcacgaaggtgaccgtcaatggcaccttcactatttggagcaattgtttgtgcagtccaaaccatctcaaatatagatttctcaa |
1509531 |
T |
|
| Q |
236 |
tctctggt |
243 |
Q |
| |
|
| |||||| |
|
|
| T |
1509530 |
tttctggt |
1509523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 236
Target Start/End: Complemental strand, 1499827 - 1499646
Alignment:
| Q |
56 |
attcccaatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttagaggtgga-atgttagtccagcttcac |
154 |
Q |
| |
|
||||| |||||||| || |||||||||| | |||||||||| |||||||| |||||| ||| ||||| || || | ||||||| ||| |||||| |
|
|
| T |
1499827 |
attcctaatggttgaaatgcctcaactagtactttatcaatattctttgagacaatctcagagacatccttacgaatattatatgttagcccaacttcac |
1499728 |
T |
|
| Q |
155 |
gaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
236 |
Q |
| |
|
|||| |||||| ||| |||||||||||||| | |||||||||||||||||||||||| | |||||||| |||||||||||| |
|
|
| T |
1499727 |
gaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgcagtccaaactaactcaaataaaggtttctcaat |
1499646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 236
Target Start/End: Complemental strand, 1487251 - 1487076
Alignment:
| Q |
62 |
aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatcttttagagg-tggaatgttagtccagcttcacgaaggt |
160 |
Q |
| |
|
||||||||||| |||| ||||| | ||||||| ||||||||||| | ||| |||| |||||||| || | | |||||||||||| |||||||||| | |
|
|
| T |
1487251 |
aatggttggaatgccttaactagttctttatcgatgttctttgagataatttcagggacatctttacgaagattaaatgttagtccaacttcacgaagtt |
1487152 |
T |
|
| Q |
161 |
gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
236 |
Q |
| |
|
| || ||| ||| ||||||||||| |||| |||||||||||||||||||| | |||||| | |||||||||||| |
|
|
| T |
1487151 |
ggccgctaattgcttcttcactatctagagctattgtttgtgcagtccaaacaagctcaaagagaggtttctcaat |
1487076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 37862955 - 37863105
Alignment:
| Q |
86 |
gctttatcaatgttctttgaaacaatcccaggaacatcttttag-aggtggaatgttagtccagcttcacgaaggtgaccatcaatggctccttcactat |
184 |
Q |
| |
|
||||| |||||||||||||| |||| ||||||||||| || || || |||||||| ||||| ||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
37862955 |
gctttctcaatgttctttgagacaaggccaggaacatccttgaggagatggaatgtcagtcctgcttctcgaaggtgaccatcaatagctccttcactat |
37863054 |
T |
|
| Q |
185 |
ctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaa |
235 |
Q |
| |
|
||||| | |||||||||||||||||||||| ||||| | ||| ||||||| |
|
|
| T |
37863055 |
ctggaacgattgtttgtgcagtccaaaccaattcaaacaaaggcttctcaa |
37863105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 37858929 - 37859079
Alignment:
| Q |
86 |
gctttatcaatgttctttgaaacaatcccaggaacatcttttag-aggtggaatgttagtccagcttcacgaaggtgaccatcaatggctccttcactat |
184 |
Q |
| |
|
||||| |||||||||||||| | || ||||||||||| || || || |||||||| || || |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
37858929 |
gctttctcaatgttctttgagataagaccaggaacatccttgaggagatggaatgtaagcccgacttcacgaaggtgaccgtcaattgctccttcactat |
37859028 |
T |
|
| Q |
185 |
ctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaa |
235 |
Q |
| |
|
||||| || |||||||||||||| |||| ||||| | |||||||||| |
|
|
| T |
37859029 |
ctggaaggatcgtttgtgcagtccataccaattcaaacaagggtttctcaa |
37859079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 236
Target Start/End: Original strand, 24163331 - 24163506
Alignment:
| Q |
62 |
aatggttggaaagcctcaactaatgctttatcaatgttctttgaaacaatcccaggaacatctttt-agaggtggaatgttagtccagcttcacgaaggt |
160 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| |||||||| ||||| | |||||||| || | || || |||| ||| ||| ||||||||| | |
|
|
| T |
24163331 |
aatggttggaatgcctcaaacaatgctttatcaatattctttgagacaatgtctggaacatccttacaaagatgaaatgatagcccaaattcacgaagtt |
24163430 |
T |
|
| Q |
161 |
gaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
236 |
Q |
| |
|
| ||| ||| ||||||||||||| |||||| ||||||||||| |||||||| | |||||||| |||||||||||| |
|
|
| T |
24163431 |
ggccacaaatagctccttcactatttggagcgattgtttgtgctgtccaaactaactcaaatagaggtttctcaat |
24163506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 35251327 - 35251251
Alignment:
| Q |
133 |
tggaatgttagtccagcttcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtcca |
209 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||| |
|
|
| T |
35251327 |
tggaatgttagtccaacctcacgaaggtgaccatcaatagctccttgactatcaggaaggattgtttgtgcagtcca |
35251251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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