View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0445_1D_low_1 (Length: 966)

Name: NF0445_1D_low_1
Description: NF0445_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0445_1D_low_1
NF0445_1D_low_1
[»] chr7 (43 HSPs)
chr7 (426-943)||(49009588-49010105)
chr7 (182-427)||(49010175-49010420)
chr7 (196-421)||(43183964-43184188)
chr7 (196-421)||(3113616-3113840)
chr7 (196-421)||(5555911-5556135)
chr7 (196-421)||(33686010-33686234)
chr7 (190-421)||(14776594-14776825)
chr7 (196-421)||(8867227-8867451)
chr7 (196-421)||(40919517-40919741)
chr7 (257-421)||(7003172-7003336)
chr7 (257-421)||(7049043-7049207)
chr7 (257-419)||(11020585-11020747)
chr7 (257-419)||(34388636-34388798)
chr7 (196-421)||(36631265-36631488)
chr7 (196-397)||(38637878-38638078)
chr7 (258-422)||(20606071-20606235)
chr7 (196-421)||(8394574-8394797)
chr7 (196-421)||(26625193-26625416)
chr7 (265-423)||(13072424-13072582)
chr7 (1-90)||(29706695-29706781)
chr7 (243-422)||(20609364-20609542)
chr7 (124-183)||(29706877-29706936)
chr7 (265-422)||(20611853-20612010)
chr7 (196-364)||(37001736-37001903)
chr7 (196-421)||(36658626-36658839)
chr7 (193-422)||(23582414-23582642)
chr7 (328-417)||(45709965-45710054)
chr7 (128-182)||(29701543-29701597)
chr7 (182-273)||(8722827-8722917)
chr7 (326-419)||(32199136-32199229)
chr7 (333-421)||(33387046-33387134)
chr7 (223-427)||(12224506-12224705)
chr7 (120-182)||(31894257-31894319)
chr7 (120-189)||(44307603-44307672)
chr7 (193-293)||(31252295-31252394)
chr7 (360-427)||(8725240-8725307)
chr7 (120-182)||(31894539-31894601)
chr7 (120-181)||(1511190-1511251)
chr7 (339-419)||(21634432-21634512)
chr7 (325-405)||(28837412-28837491)
chr7 (124-187)||(1511475-1511538)
chr7 (124-183)||(10878623-10878682)
chr7 (124-186)||(28408529-28408591)
[»] chr8 (40 HSPs)
chr8 (193-421)||(9175581-9175808)
chr8 (196-421)||(42231384-42231608)
chr8 (196-421)||(3648288-3648512)
chr8 (196-421)||(9877667-9877891)
chr8 (196-421)||(378871-379094)
chr8 (196-421)||(2728689-2728913)
chr8 (196-421)||(16787521-16787745)
chr8 (204-421)||(34136305-34136521)
chr8 (257-421)||(4404455-4404619)
chr8 (190-421)||(39914963-39915194)
chr8 (257-411)||(7278480-7278634)
chr8 (194-421)||(19034-19262)
chr8 (196-421)||(23402555-23402779)
chr8 (257-421)||(29727938-29728100)
chr8 (278-421)||(40470118-40470261)
chr8 (195-419)||(40401001-40401224)
chr8 (184-423)||(29351807-29352045)
chr8 (195-422)||(32539972-32540185)
chr8 (1-90)||(14161311-14161397)
chr8 (124-184)||(14161495-14161555)
chr8 (196-388)||(3435726-3435917)
chr8 (339-421)||(15838734-15838816)
chr8 (258-419)||(35852495-35852656)
chr8 (128-182)||(14156163-14156217)
chr8 (257-399)||(32964064-32964206)
chr8 (226-419)||(15541743-15541935)
chr8 (330-396)||(36409020-36409086)
chr8 (182-397)||(29892039-29892250)
chr8 (120-189)||(20178363-20178432)
chr8 (120-189)||(20223091-20223160)
chr8 (223-352)||(33639154-33639282)
chr8 (354-417)||(32750371-32750434)
chr8 (340-421)||(3672247-3672327)
chr8 (124-187)||(14577154-14577217)
chr8 (360-411)||(15863285-15863336)
chr8 (196-342)||(17479956-17480101)
chr8 (123-185)||(30928309-30928371)
chr8 (124-186)||(35482990-35483052)
chr8 (122-179)||(17844167-17844224)
chr8 (124-181)||(30928601-30928658)
[»] chr1 (26 HSPs)
chr1 (190-421)||(41971746-41971977)
chr1 (190-421)||(3829430-3829659)
chr1 (196-421)||(11957845-11958069)
chr1 (196-419)||(35907977-35908199)
chr1 (196-421)||(17445741-17445965)
chr1 (257-421)||(7433869-7434033)
chr1 (257-421)||(42310495-42310659)
chr1 (196-421)||(32981551-32981775)
chr1 (257-420)||(23313443-23313606)
chr1 (278-421)||(33490153-33490296)
chr1 (222-420)||(28463396-28463582)
chr1 (277-419)||(32944357-32944499)
chr1 (265-399)||(5715373-5715507)
chr1 (298-373)||(7350228-7350303)
chr1 (360-422)||(33774629-33774691)
chr1 (277-418)||(18716322-18716463)
chr1 (257-420)||(3604699-3604863)
chr1 (124-184)||(12115240-12115300)
chr1 (257-352)||(42412370-42412464)
chr1 (190-399)||(17744594-17744802)
chr1 (120-183)||(7113863-7113926)
chr1 (124-187)||(19897170-19897233)
chr1 (127-182)||(40290073-40290128)
chr1 (380-422)||(9901670-9901712)
chr1 (124-186)||(17611713-17611775)
chr1 (120-186)||(25780173-25780239)
[»] chr4 (55 HSPs)
chr4 (196-421)||(3292392-3292616)
chr4 (196-421)||(28876810-28877034)
chr4 (196-421)||(6235957-6236181)
chr4 (196-421)||(6689731-6689955)
chr4 (225-421)||(29995507-29995703)
chr4 (196-421)||(43143080-43143304)
chr4 (190-421)||(20129762-20129993)
chr4 (190-421)||(26438766-26438997)
chr4 (190-421)||(34406771-34407002)
chr4 (190-421)||(43356353-43356584)
chr4 (190-421)||(47501222-47501453)
chr4 (196-419)||(33135940-33136162)
chr4 (196-421)||(42333270-42333495)
chr4 (257-421)||(10352439-10352604)
chr4 (196-421)||(25931157-25931381)
chr4 (196-421)||(35546400-35546623)
chr4 (190-421)||(13012637-13012868)
chr4 (196-421)||(17510723-17510951)
chr4 (190-421)||(36381836-36382065)
chr4 (196-421)||(48989776-48990000)
chr4 (257-421)||(30077191-30077356)
chr4 (228-421)||(48130425-48130617)
chr4 (222-420)||(29134152-29134349)
chr4 (196-421)||(30110410-30110634)
chr4 (257-421)||(30216301-30216462)
chr4 (285-421)||(40529464-40529600)
chr4 (330-419)||(13394870-13394959)
chr4 (257-421)||(50204643-50204797)
chr4 (258-422)||(9415345-9415509)
chr4 (259-422)||(4038262-4038425)
chr4 (195-406)||(13502113-13502322)
chr4 (258-420)||(26546856-26547017)
chr4 (333-422)||(29094594-29094683)
chr4 (209-422)||(31853673-31853885)
chr4 (222-422)||(56225750-56225950)
chr4 (330-421)||(1818164-1818256)
chr4 (196-315)||(13390943-13391061)
chr4 (124-187)||(21360451-21360514)
chr4 (120-187)||(30055488-30055555)
chr4 (201-375)||(49062453-49062626)
chr4 (339-422)||(5290887-5290970)
chr4 (193-420)||(20629019-20629245)
chr4 (382-421)||(26448499-26448538)
chr4 (339-418)||(54933459-54933538)
chr4 (196-310)||(44157182-44157295)
chr4 (257-418)||(9070730-9070891)
chr4 (124-180)||(30799612-30799668)
chr4 (299-422)||(2941119-2941242)
chr4 (190-293)||(26449291-26449393)
chr4 (124-187)||(37872761-37872824)
chr4 (257-304)||(40529651-40529698)
chr4 (120-187)||(46143555-46143622)
chr4 (124-186)||(13294891-13294953)
chr4 (124-182)||(25297679-25297737)
chr4 (369-418)||(18625554-18625603)
[»] chr3 (37 HSPs)
chr3 (196-421)||(40081235-40081459)
chr3 (196-421)||(6930389-6930613)
chr3 (190-421)||(6268913-6269144)
chr3 (190-421)||(22967931-22968162)
chr3 (225-421)||(27935624-27935818)
chr3 (196-421)||(5135735-5135959)
chr3 (196-421)||(45183428-45183651)
chr3 (190-421)||(39772239-39772470)
chr3 (196-421)||(6503065-6503289)
chr3 (257-421)||(19390595-19390760)
chr3 (257-421)||(19565056-19565221)
chr3 (226-417)||(29564674-29564868)
chr3 (196-421)||(34083615-34083838)
chr3 (257-421)||(45336320-45336485)
chr3 (257-421)||(33041400-33041561)
chr3 (193-304)||(8257407-8257517)
chr3 (196-391)||(11017765-11017959)
chr3 (257-416)||(27912456-27912615)
chr3 (284-422)||(35937668-35937806)
chr3 (348-427)||(38282857-38282936)
chr3 (339-421)||(8257275-8257357)
chr3 (366-427)||(38415473-38415534)
chr3 (124-183)||(52091714-52091773)
chr3 (277-419)||(7468757-7468899)
chr3 (124-182)||(52090881-52090939)
chr3 (182-279)||(3159292-3159388)
chr3 (120-185)||(3612591-3612656)
chr3 (341-422)||(19814766-19814847)
chr3 (286-414)||(219189-219317)
chr3 (124-187)||(5048383-5048446)
chr3 (193-240)||(16094646-16094693)
chr3 (123-186)||(44506331-44506394)
chr3 (265-403)||(10842155-10842293)
chr3 (120-182)||(17574372-17574434)
chr3 (120-186)||(22975629-22975695)
chr3 (385-427)||(40368673-40368715)
chr3 (325-422)||(5177323-5177420)
[»] chr2 (35 HSPs)
chr2 (196-421)||(45419030-45419254)
chr2 (182-419)||(7072016-7072252)
chr2 (190-421)||(17444528-17444759)
chr2 (257-421)||(31581175-31581339)
chr2 (190-421)||(41251121-41251352)
chr2 (196-421)||(35963139-35963363)
chr2 (190-421)||(6403291-6403522)
chr2 (257-421)||(12756393-12756557)
chr2 (257-421)||(18982038-18982202)
chr2 (196-419)||(4554689-4554910)
chr2 (196-419)||(32126683-32126905)
chr2 (257-421)||(2957700-2957864)
chr2 (196-421)||(2286237-2286460)
chr2 (196-421)||(26162198-26162422)
chr2 (258-422)||(37621618-37621782)
chr2 (193-415)||(26591496-26591716)
chr2 (206-416)||(18829309-18829518)
chr2 (278-419)||(26238390-26238531)
chr2 (257-421)||(42442433-42442597)
chr2 (285-421)||(44084185-44084321)
chr2 (225-382)||(45121695-45121851)
chr2 (305-421)||(21556543-21556659)
chr2 (257-421)||(816613-816777)
chr2 (258-421)||(17373394-17373558)
chr2 (228-421)||(8058871-8059052)
chr2 (279-423)||(25391425-25391568)
chr2 (349-421)||(15441832-15441904)
chr2 (124-183)||(8322471-8322530)
chr2 (124-187)||(27360410-27360473)
chr2 (267-421)||(37226501-37226654)
chr2 (124-184)||(30337717-30337777)
chr2 (368-422)||(3843980-3844034)
chr2 (124-182)||(17846007-17846065)
chr2 (388-421)||(8147799-8147832)
chr2 (124-181)||(30337424-30337481)
[»] chr6 (23 HSPs)
chr6 (196-421)||(28997177-28997401)
chr6 (196-419)||(34948277-34948499)
chr6 (190-421)||(399066-399297)
chr6 (257-421)||(33228891-33229056)
chr6 (257-421)||(29743731-29743896)
chr6 (193-427)||(28931450-28931683)
chr6 (1-92)||(21424461-21424549)
chr6 (196-421)||(13838245-13838472)
chr6 (193-422)||(10231747-10231975)
chr6 (195-345)||(23217452-23217600)
chr6 (124-181)||(21424643-21424700)
chr6 (265-427)||(31373247-31373409)
chr6 (128-184)||(21419308-21419364)
chr6 (370-421)||(18339541-18339592)
chr6 (268-422)||(12098436-12098590)
chr6 (268-422)||(12849947-12850101)
chr6 (124-181)||(10026140-10026197)
chr6 (328-419)||(22814710-22814801)
chr6 (366-427)||(4335187-4335248)
chr6 (124-184)||(10027124-10027184)
chr6 (190-422)||(11796942-11797172)
chr6 (333-399)||(4335252-4335318)
chr6 (124-186)||(33595608-33595670)
[»] chr5 (46 HSPs)
chr5 (196-421)||(15959441-15959665)
chr5 (196-421)||(31680814-31681038)
chr5 (196-421)||(33430768-33430992)
chr5 (258-422)||(192353-192517)
chr5 (257-416)||(23034427-23034586)
chr5 (196-421)||(13818426-13818650)
chr5 (196-421)||(31501214-31501438)
chr5 (190-419)||(26282805-26283034)
chr5 (196-421)||(39657022-39657249)
chr5 (257-421)||(31271854-31272018)
chr5 (190-421)||(36293108-36293339)
chr5 (196-421)||(1775871-1776094)
chr5 (196-421)||(16333395-16333619)
chr5 (277-421)||(10034351-10034495)
chr5 (257-421)||(12278412-12278576)
chr5 (224-422)||(38268944-38269130)
chr5 (257-419)||(37255054-37255216)
chr5 (196-421)||(17332115-17332339)
chr5 (190-421)||(39435145-39435376)
chr5 (257-421)||(36291818-36291982)
chr5 (257-396)||(43069329-43069468)
chr5 (182-421)||(16155446-16155683)
chr5 (353-422)||(30297604-30297673)
chr5 (257-422)||(27750683-27750846)
chr5 (300-422)||(11779160-11779282)
chr5 (193-391)||(24792894-24793096)
chr5 (257-406)||(18266162-18266315)
chr5 (278-357)||(28801712-28801791)
chr5 (233-422)||(8788264-8788452)
chr5 (323-412)||(23034262-23034351)
chr5 (325-422)||(35911354-35911451)
chr5 (327-427)||(35338308-35338408)
chr5 (339-422)||(20368490-20368573)
chr5 (222-340)||(30297492-30297606)
chr5 (366-418)||(33094355-33094407)
chr5 (124-192)||(35362206-35362274)
chr5 (339-422)||(20363128-20363211)
chr5 (258-420)||(30922486-30922648)
chr5 (124-181)||(27843023-27843080)
chr5 (295-416)||(1050533-1050650)
chr5 (124-183)||(15179078-15179137)
chr5 (367-418)||(22761177-22761228)
chr5 (124-183)||(32994443-32994502)
chr5 (124-182)||(32458075-32458133)
chr5 (124-186)||(35363278-35363340)
chr5 (124-181)||(19558161-19558218)
[»] scaffold0041 (1 HSPs)
scaffold0041 (196-421)||(53354-53578)
[»] scaffold0002 (2 HSPs)
scaffold0002 (190-421)||(479944-480175)
scaffold0002 (124-184)||(330194-330254)
[»] scaffold0134 (1 HSPs)
scaffold0134 (195-422)||(17754-17978)
[»] scaffold0069 (1 HSPs)
scaffold0069 (190-416)||(18012-18238)
[»] scaffold0495 (1 HSPs)
scaffold0495 (193-422)||(8467-8695)
[»] scaffold0166 (1 HSPs)
scaffold0166 (193-391)||(35277-35479)
[»] scaffold0831 (1 HSPs)
scaffold0831 (223-363)||(3383-3521)
[»] scaffold0311 (1 HSPs)
scaffold0311 (124-184)||(12885-12945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (124-184)||(136913-136973)
[»] scaffold0347 (2 HSPs)
scaffold0347 (120-181)||(11940-12001)
scaffold0347 (125-182)||(12223-12280)


Alignment Details
Target: chr7 (Bit Score: 498; Significance: 0; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 426 - 943
Target Start/End: Complemental strand, 49010105 - 49009588
Alignment:
Q  426 atcttaaacatgtctagaaaacaaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttctttttgcaaac 525  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49010105 atcttaaacatgtctagaaaataaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttctttttgcaaac 49010006  T
Q  526 attcacatcttacaataaaacaatattgtacatagtatagtatagcatcatatttctctgaagacaatcaattgatggctctctaagattaatggcaatg 625  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49010005 attcatatcttacaataaaacaatattgtacatagtatagtatagcatcatatttctctgaagacaattaattgatggctctctaagattaatggcaatg 49009906  T
Q  626 ctattaacctacttgtcaatatccatgttgttgttttggatttcatttgcaatggtaaatttcacatccacaatttaattgctcaaaagtctccgaacat 725  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009905 ctattaacctacttgtcaatatccatgttgttgttttggatttcatttgcaatggtaaatttcacatccacaatttaattgctcaaaagtctccgaacat 49009806  T
Q  726 agcctagaaaatgcacgaccatatccttcctaattctactcaaaatgactctatttattggaagcattttgaatcaaatttgttcatctttaaaaatgtt 825  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009805 agcctagaaaatgcacgaccatatccttcctaattctactcaaaatgactctatttattggaagcattttgaatcaaatttgttcatctttaaaaatgtt 49009706  T
Q  826 tttggttatttgaatcaaccttatttgttggcctcctttgtttttacacgctttcaagagttctcttattgttccttagagccccagaagcaggaggcaa 925  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49009705 tttggttatttgaatcaaccttatttgttggcctcctttgtttttacacgctttcaagagttctcttattgttccttagagccctagaagcaggaggcaa 49009606  T
Q  926 aattgcatatgtttaaca 943  Q
    ||||| ||||||||||||    
T  49009605 aattgaatatgtttaaca 49009588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 182 - 427
Target Start/End: Complemental strand, 49010420 - 49010175
Alignment:
Q  182 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 281  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  49010420 taaaaacgatttgcaaagttttatagcatttcaatgacgattctatttatttttatttttaaacaaaaacgtgcaaaaattgaaattttgttcctaataa 49010321  T
Q  282 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 381  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49010320 gcgtatactcacaggtcaaatttcgttccctaattttataagcatggttagaacataataagaatcttcacaatgaagttttgcaatttttaaacgagag 49010221  T
Q  382 acaaattaattataaattgtttaagtaattcataattatggaaaat 427  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  49010220 acaaattaattataaattgtttaagaaattcataattatggaaaat 49010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 43183964 - 43184188
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43183964 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43184062  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43184063 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43184162  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  43184163 aattgtttaagaaattcataattatg 43184188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 3113616 - 3113840
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  3113616 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3113714  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  3113715 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 3113814  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  3113815 aattgtttaagaaattcataattatg 3113840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 5556135 - 5555911
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| ||| |||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5556135 aaagtttcataacatatcaaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5556037  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  5556036 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 5555937  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  5555936 aattgtttaagaaattcataattatg 5555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 33686234 - 33686010
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| ||||  ||||||| || ||||||||||||  ||||||||||||||||      
T  33686234 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaa 33686136  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||| | || || |||||  |||||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  33686135 gtcaaatttagttccctacttttgtaggcatgactagaacatgataagaatcttcacaataaaattttgtagtttttaaacgagatacaaattaattata 33686036  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  33686035 aattgtttaagaaattcataattatg 33686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 14776594 - 14776825
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  14776594 atttgtaaagtttcatagcatttcaaagtcgtttaaatttattttaatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 14776692  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  ||||| || ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  14776693 tcacaagtcaaatttagttccctaattttgtaggcatgactagaatatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 14776792  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  14776793 aattataaattgtttaagaaattcataattatg 14776825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 8867227 - 8867451
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  8867227 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8867325  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  8867326 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacaagatacaaattaattata 8867425  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  8867426 aattgtttaagaaattcataattatg 8867451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 40919517 - 40919741
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  40919517 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 40919615  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  40919616 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 40919715  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  40919716 aattgtttaagaaattcataattatg 40919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 7003336 - 7003172
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7003336 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7003237  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| ||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7003236 aaattttgtagtctttaaacgatatacaaattaattataaattgtttaagaaattcataattatg 7003172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 7049207 - 7049043
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7049207 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7049108  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| ||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7049107 aaattttgtagtctttaaacgatatacaaattaattataaattgtttaagaaattcataattatg 7049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 11020585 - 11020747
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||| |||   ||||||||| ||||||||||||| || |||||  ||||  || ||||||| |||||||| |    
T  11020585 aaaattgaaattttgttccgcgtaagcgtataatcataagtcaaatttagttccctaatcttgtaggcatgactagacaatgataagaaccttcacaacg 11020684  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    || ||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  11020685 aaattttggagtttttaaacgagatacaaattaattataaattgtttaagaaatttataatta 11020747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 34388636 - 34388798
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  |||||| |||| ||||  ||||||||| |||||||||| || || |||||  | |||||| ||||||| ||||||| ||    
T  34388636 aaaattgaaattttgttccgcgtaagcatatattcacaagtcaaatttagttccctaattttgtaggcatgactggaacatgataagaaccttcacagtg 34388735  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34388736 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataatta 34388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 36631488 - 36631265
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36631488 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36631390  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    | ||||||| |||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| | ||||||||||||| |||| ||||||||     
T  36631389 g-caaatttagttctctaattttgtaggcatgactagaacatgataagaactttcacaatgaaattttgtaatttttaaacgagatacaatttaattatc 36631291  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  36631290 aattgtttaagaaattcataattatg 36631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 196 - 397
Target Start/End: Original strand, 38637878 - 38638078
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  38637878 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 38637976  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  38637977 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaatttttgtagtctttaaacgagatacaaattaattata 38638076  T
Q  396 aa 397  Q
    ||    
T  38638077 aa 38638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 258 - 422
Target Start/End: Complemental strand, 20606235 - 20606071
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    |||||| ||||||||||| ||||||| |||||| || | ||||||||||||   ||||  | || ||||||||||||||| ||||||| |||||| ||||    
T  20606235 aaattgcaattttgttccgagtaagcatatactgacggatcaaatttcgttatataattctgtaggcatggttagaacatgataagaaccttcaccatga 20606136  T
Q  358 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    | ||||| |||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  20606135 aattttgaagtttttaaatgagatacaaattaattatgaattgtttaagaaattcataattatgg 20606071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 8394797 - 8394574
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||| ||| |||||||||||||||  ||||||||||||||||      
T  8394797 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8394699  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    |  |||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | |||||||| |||| | ||||||||||||    
T  8394698 ga-aaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaatgagatataaattaattata 8394600  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  8394599 aattgtttaagaaattcataattatg 8394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 26625416 - 26625193
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | |  | || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  26625416 aaagtttcatagcatttcgaagttgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 26625318  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    || |||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| |||||| |||| ||||||||||||||    
T  26625317 gttaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaatgagatacaaattaattata 26625218  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    |||||||| ||  |||||||||||||    
T  26625217 aattgttt-agagattcataattatg 26625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 265 - 423
Target Start/End: Original strand, 13072424 - 13072582
Alignment:
Q  265 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 364  Q
    ||||||||||  ||||||||||||||||| |||||||||| |||| ||||| ||  | | ||| |||||| || ||||||| |||||| ||||| |||||    
T  13072424 aattttgttcagagtaagcgtatactcacgggtcaaattttgttctctaattttggaggtatgtttagaatatcataagaaccttcaccatgaaattttg 13072523  T
Q  365 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgga 423  Q
     || |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  13072524 gagattttaaacgagatactaattaattatgaattgtttaagaaattcataattatgga 13072582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29706695 - 29706781
Alignment:
Q  1 agatttgattttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 90  Q
    ||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  29706695 agatttgattttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattagagaagatgaacataacgttaa 29706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 243 - 422
Target Start/End: Complemental strand, 20609542 - 20609364
Alignment:
Q  243 aacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 342  Q
    |||||||| |||||||| | | |||||| |||| | ||||||||||||||| ||||||||| ||||   ||||  | || ||||||||||||||  ||||    
T  20609542 aacaaaaacgtgcaaaa-tagcaatttttttccgaataagcgtatactcacgggtcaaattccgttatataattctgtaggcatggttagaacaagataa 20609444  T
Q  343 gaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||| |||||| ||| | ||||| || ||||||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20609443 gaaccttcaccatgcaattttgaagattttaaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20609364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 29706877 - 29706936
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29706877 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 29706936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 265 - 422
Target Start/End: Complemental strand, 20612010 - 20611853
Alignment:
Q  265 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 364  Q
    |||||| |||| |||||||||||||||||  |||||||| ||||   ||||  | || |||| |||||||||| ||||||| |||||| ||| | |||||    
T  20612010 aatttttttccgagtaagcgtatactcacgcgtcaaattccgttatataattctgtaggcatagttagaacatgataagaaccttcaccatgcaattttg 20611911  T
Q  365 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
     || ||||||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20611910 aagattttaaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 196 - 364
Target Start/End: Original strand, 37001736 - 37001903
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  37001736 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 37001834  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 364  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| |||||    
T  37001835 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttg 37001903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 36658839 - 36658626
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36658839 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36658741  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    || ||||||  |||||||||  | || ||| |  ||||||           ||||||||| || ||||| ||| ||||||||||| ||||||||||||||    
T  36658740 gtgaaatttaattccctaattctgtaggcaagactagaac-----------cttcacaataaaattttgtagtctttaaacgagatacaaattaattata 36658652  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  36658651 aattgtttaagaaattcataattatg 36658626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 193 - 422
Target Start/End: Complemental strand, 23582642 - 23582414
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    ||||||||||| ||||| ||||| |||  ||| ||||||||| |||||  ||| ||||  ||| ||| ||| ||||||||||| |||||| ||||| |||    
T  23582642 tgcaaagttttgtagcaattcaaagacatttctatttattttaatttttcaactaaaacttgctaaa-ttgcaattttgttccgagtaagagtataatca 23582544  T
Q  293 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
    | |||||||||| |||  ||||| || || ||||||||||||||| |||| ||  |||||  |||| ||| | |||||||||| |||| |  ||||||||    
T  23582543 cgggtcaaattttgttatctaattttttaggcatggttagaacatcataataacattcaccgtgaaatttggtagtttttaaatgagatatgaattaatt 23582444  T
Q  393 ataaattgtttaagtaattcataattatgg 422  Q
    || | || || ||| |||||||| ||||||    
T  23582443 atgactttttaaagaaattcatagttatgg 23582414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 328 - 417
Target Start/End: Complemental strand, 45710054 - 45709965
Alignment:
Q  328 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 417  Q
    |||||||||| |||||||||||||| ||||| ||||  ||||||| |||||| ||  |||||||||||||||||||||||||||| ||||    
T  45710054 gttagaacattataagaatcttcaccatgaaattttagagtttttgaacgagggaagaattaattataaattgtttaagtaattcttaat 45709965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 29701597 - 29701543
Alignment:
Q  128 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29701597 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 29701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 8722827 - 8722917
Alignment:
Q  182 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt 273  Q
    |||||| |||||||||||||| |||||||||| |  |||||||||||||||||||||||  ||| |||  |||| |||||||||||||||||    
T  8722827 taaaaataatttgcaaagtttcatagcatttcgaatacgattcaatttatttttatttttcaaccaaaccgtgc-aaaattgaaattttgtt 8722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 326 - 419
Target Start/End: Complemental strand, 32199229 - 32199136
Alignment:
Q  326 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    |||||| |||||  |||||||||||||  || | ||||  |||||||||||||||||||||||||||| |||||||||| | ||||| ||||||    
T  32199229 tggttataacatcgtaagaatcttcaccgtggaattttatagtttttaaacgagagacaaattaattaaaaattgtttatgaaattcttaatta 32199136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 333 - 421
Target Start/End: Complemental strand, 33387134 - 33387046
Alignment:
Q  333 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    |||||||||| ||  ||||| ||||| ||||  ||||||| |||||| || ||||||||||| ||||||||||| ||||||||||||||    
T  33387134 aacataataataactttcaccatgaaatttttgagtttttgaacgagtgataaattaattatgaattgtttaagaaattcataattatg 33387046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 427
Target Start/End: Original strand, 12224506 - 12224705
Alignment:
Q  223 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 322  Q
    |||||| ||||| |||||  ||| |||| |||||||| ||| |||||||||   ||||| | |||||||||  ||||||| ||| |||||||| |||||     
T  12224506 tcaattgattttgatttttcaaccaaaacgtgcaaaa-ttgcaattttgttatgagtaatcatatactcacatgtcaaatgtcgctccctaattttatag 12224604  T
Q  323 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||| ||||||||| ||||||   ||||| || || ||||  |||||||||||||||||  |||||||||  |||    |||| |||||||||||||||    
T  12224605 gcatgattagaacatcataaga---ttcaccataaaattttagagtttttaaacgagaga-gaattaattaggaataacataagaaattcataattatgg 12224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 31894319 - 31894257
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| |||| |||||||||||||    
T  31894319 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 44307672 - 44307603
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 189  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  44307672 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 44307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 31252295 - 31252394
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    |||||||||| ||| ||||||||||| | |||||||||||||||||||  ||  |||| ||||  |||||| ||||||||||| || ||||||||| |||    
T  31252295 tgcaaagtttcataacatttcaatgatgtttcaatttatttttatttttgaatcaaaacgtgc-taaattgcaattttgttccgagcaagcgtatattca 31252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 8725240 - 8725307
Alignment:
Q  360 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 427  Q
    |||||||| ||||||| |||||| ||  ||||||||||||||||||| |||| |||||||||| ||||    
T  8725240 ttttgcagattttaaaggagagaaaaggtaattataaattgtttaagaaatttataattatgggaaat 8725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 31894539 - 31894601
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    |||||||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||    
T  31894539 aaaaataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 1511251 - 1511190
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||| | || ||||||||||||    
T  1511251 aaaaataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttgcc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 339 - 419
Target Start/End: Complemental strand, 21634512 - 21634432
Alignment:
Q  339 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    |||||||||||||| || || ||||  ||||||||||||||  |  |||||||||||||||||||||  ||||| ||||||    
T  21634512 ataagaatcttcaccataaaattttagagtttttaaacgaggaatgaattaattataaattgtttaaaaaattcttaatta 21634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 325 - 405
Target Start/End: Original strand, 28837412 - 28837491
Alignment:
Q  325 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaa 405  Q
    |||||||||| || |||| || |||||||||||| ||||  ||||||| ||||||| ||||||||| ||| ||||||||||    
T  28837412 atggttagaatatcataaaaaccttcacaatgaaattttagagttttttaacgagaaacaaattaa-tatgaattgtttaa 28837491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 1511475 - 1511538
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    |||||||||||||  ||||||||||  ||||||| ||||| | || ||||||||||||||||||    
T  1511475 ataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcctaaaaa 1511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 10878682 - 10878623
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 183  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  10878682 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 10878623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 28408529 - 28408591
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  28408529 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 28408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 1e-56; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 193 - 421
Target Start/End: Complemental strand, 9175808 - 9175581
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    ||||||||||||||||||||| | || ||||| ||||  |||||||||  ||| |||| |||||||| || |||||||||||||||||||| | ||||||    
T  9175808 tgcaaagttttatagcatttcgaagatgattctattttattttatttttcaactaaaatgtgcaaaa-ttaaaattttgttcctagtaagcatttactca 9175710  T
Q  293 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
      |||||||||| |||||||||| || || |||  |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  9175709 tgggtcaaattttgttccctaattttgtaggcaatgttagaacataataagatccttcactatgaagttttgcagtttttaaacgagagacaaattaatt 9175610  T
Q  393 ataaattgtttaagtaattcataattatg 421  Q
    |||| || |||||| ||||||||||||||    
T  9175609 ataagttatttaagaaattcataattatg 9175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 42231608 - 42231384
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    |||||||||||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42231608 aaagttttatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42231510  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | ||||||||||||| ||||||||||||||    
T  42231509 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaacgagatacaaattaattata 42231410  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  42231409 aattgtttaagaaattcataattatg 42231384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 3648288 - 3648512
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  3648288 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 3648386  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  3648387 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagataaaaattaattata 3648486  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  3648487 aattgtttaagaaattcataattatg 3648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 9877891 - 9877667
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  9877891 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcacaa 9877793  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| |||||||||||||     
T  9877792 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattatg 9877693  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  9877692 aattgtttaagaaattcataattatg 9877667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 379094 - 378871
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || ||||||||||||| ||||| || ||||| | ||||||| ||||| ||||||||| |||||| |||||||||  |    
T  379094 aaagtttcatagcatttcgaagtcgtttcaatttattttaattttgaaccaaaacg-tgcaaaa-ttgaatttttgttccgagtaagtgtatactcatag 378997  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    |||||||||  ||||||||| ||  | |||||  |||||||| ||||||| ||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  378996 gtcaaatttaattccctaattttgcaggcatgactagaacatgataagaaacttcacaataaaattttgtagtttttaaacgagatacaaattaattata 378897  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  378896 aattgtttaagaaattcataattatg 378871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 2728689 - 2728913
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| || ||||| ||||||||||||||   ||||| ||||||||||      
T  2728689 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgttcaaaa-ttgaaattttgttctgcgtaagtgtatactcacaa 2728787  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    || |||||| |||||||||| ||||| |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| ||||||||||||||    
T  2728788 gttaaatttagttccctaattttataggcatgactagaacatgataagaaccttcacagtgaaattttatagtttttaaacgagatacaaattaattata 2728887  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  2728888 aattgtttaagaaattcataattatg 2728913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 16787521 - 16787745
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16787521 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16787619  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||| ||| |||||||  |||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  16787620 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaactttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 16787719  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  16787720 aattgtttaagaaattcataattatg 16787745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 204 - 421
Target Start/End: Original strand, 34136305 - 34136521
Alignment:
Q  204 atagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt 303  Q
    |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  ||||||||    
T  34136305 atagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaatt 34136403  T
Q  304 tcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgttt 403  Q
    | |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||||||||||    
T  34136404 tagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattataaattgttt 34136503  T
Q  404 aagtaattcataattatg 421  Q
    ||| ||||||||||||||    
T  34136504 aagaaattcataattatg 34136521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 4404619 - 4404455
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||| ||| ||    
T  4404619 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctttacagtg 4404520  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4404519 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 4404455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 39915194 - 39914963
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39915194 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39915096  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39915095 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39914996  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  39914995 aattataaattgtttaagaaattcataattatg 39914963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 257 - 411
Target Start/End: Complemental strand, 7278634 - 7278480
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7278634 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7278535  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaatt 411  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  7278534 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaatt 7278480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 194 - 421
Target Start/End: Complemental strand, 19262 - 19034
Alignment:
Q  194 gcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac 293  Q
    ||||||||| ||||||||||||  | || |||||||| ||| |||||  | | ||||| | ||||| ||| ||||||||||| | ||| | |||||||||    
T  19262 gcaaagtttcatagcatttcaaaaatgactcaatttagtttgatttttcatccaaaagtttcaaaatttgcaattttgttccaaataaccatatactcac 19163  T
Q  294 tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca-caatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
    ||||||||||| |||||||||| || |  |||||||||||| |  ||||||||||||| | | ||| ||||| ||||||||||| || ||||||||||||    
T  19162 tggtcaaattttgttccctaattttgtttgcatggttagaataccataagaatcttcaccgacgaaattttgaagtttttaaaccagggacaaattaatt 19063  T
Q  393 ataaattgtttaagtaattcataattatg 421  Q
    || ||||||||||| ||||||||||||||    
T  19062 attaattgtttaagaaattcataattatg 19034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 23402779 - 23402555
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||||||| |||||      
T  23402779 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatgctcacaa 23402681  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||| | |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  23402680 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcatagtgaaattttgtagtctttaaacaagatacaaattaattata 23402581  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    | ||||||||| ||||||||||||||    
T  23402580 agttgtttaagaaattcataattatg 23402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 29727938 - 29728100
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| ||  | |||||  |||||||  |  |||| ||||||||||    
T  29727938 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgcaggcatgactagaacacga--agaaccttcacaatg 29728035  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29728036 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 29728100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 278 - 421
Target Start/End: Original strand, 40470118 - 40470261
Alignment:
Q  278 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 377  Q
    ||||||||||| ||||  | ||||||| |||||||||| || || |||||  || ||||| |||||||| ||||||||||| ||||| |||||||||| |    
T  40470118 gtaagcgtataatcacaaggcaaatttagttccctaattttgtaggcatgactaaaacatgataagaatattcacaatgaaattttgtagtttttaaatg 40470217  T
Q  378 agagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||    
T  40470218 agatacaaattaattataaattgtttaagaaattcataattatg 40470261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 195 - 419
Target Start/End: Original strand, 40401001 - 40401224
Alignment:
Q  195 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 294  Q
    |||||||| ||| |||||  | |||| ||| |||||||||||||||  ||| ||||  | | ||||||| |||||| |||| |||||||||||||||||     
T  40401001 caaagtttcatatcattttgaagacgtttcgatttatttttatttttcaaccaaaacatac-aaaattgcaattttattccgagtaagcgtatactcaca 40401099  T
Q  295 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 394  Q
    | ||||||||| ||||||||| |||   |||| |||||||||| ||||||| |||||  ||||  || || ||||||| |||||||||| ||||||||||    
T  40401100 gctcaaatttcattccctaattttacgggcatagttagaacatcataagaaccttcaacatgacattctggagtttttgaacgagagacgaattaattat 40401199  T
Q  395 aaattgtttaagtaattcataatta 419  Q
    ||||| ||| || ||||||||||||    
T  40401200 aaattattttagaaattcataatta 40401224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 184 - 423
Target Start/End: Complemental strand, 29352045 - 29351807
Alignment:
Q  184 aaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagc 283  Q
    |||| ||| |||||| |||  ||||||||||| |||| || ||||| ||||||||||  ||| |||| |||| ||| ||| ||||||||||||||||| |    
T  29352045 aaaaaaatctgcaaattttcgtagcatttcaaagacgttttaatttgtttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgttcctagtaaac 29351947  T
Q  284 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 383  Q
    |||||||||   ||||||||  |||||||||  || || ||||||||||||||  |||| ||  ||||| ||||  ||||| ||||||||  ||||| ||    
T  29351946 gtatactcatgagtcaaattatgttccctaactttgtaggcatggttagaacagcataaaaactttcaccatgagattttggagtttttactcgagatac 29351847  T
Q  384 aaattaattataaattgtttaagtaattcataattatgga 423  Q
    |||||||| || |||| |||||| ||||||||||||||||    
T  29351846 aaattaataatgaattttttaagaaattcataattatgga 29351807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 195 - 422
Target Start/End: Original strand, 32539972 - 32540185
Alignment:
Q  195 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 294  Q
    |||||||| |||||||||| | |||| |||||||||||||||||||  ||| ||||  || |||| ||||||||||||||||||||||| ||||||||      
T  32539972 caaagtttcatagcatttcgaagacgtttcaatttatttttatttttcaaccaaaacatgtaaaa-ttgaaattttgttcctagtaagcatatactcatg 32540070  T
Q  295 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 394  Q
     ||||||||| ||             | ||||||||||||||||||||||| ||||| |||||| ||||  | |||||||| ||||||| ||||||||||    
T  32540071 tgtcaaattttgt-------------aggcatggttagaacataataagaaccttcaaaatgaaattttataatttttaaatgagagacgaattaattat 32540157  T
Q  395 aaattgtttaagtaattcataattatgg 422  Q
    ||||| |||||| |||| ||||||||||    
T  32540158 aaattttttaagaaatttataattatgg 32540185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14161311 - 14161397
Alignment:
Q  1 agatttgattttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 90  Q
    ||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  14161311 agatttgattttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattagagaagatgaacataacgttaa 14161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 14161495 - 14161555
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14161495 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 14161555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 196 - 388
Target Start/End: Complemental strand, 3435917 - 3435726
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| | |||||| | |||||||||||||  |||||| |||||||||      
T  3435917 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgcgcaaaact-gaaattttgttccgcgtaagcatatactcacaa 3435819  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||||||| ||||||||||  | || |||||  |||||||| |||||||  |||||||| || ||||| ||||||||||||||| |||||||    
T  3435818 gtcaaatttagttccctaattatgtaggcatgactagaacatgataagaacattcacaattaaattttgtagtttttaaacgagatacaaatt 3435726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 339 - 421
Target Start/End: Complemental strand, 15838816 - 15838734
Alignment:
Q  339 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  15838816 ataagaaccttcacaataaaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 15838734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 258 - 419
Target Start/End: Original strand, 35852495 - 35852656
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    |||||| ||||||||||| | |||||  ||||||||  || |||||| |||| ||||| ||||| ||||||||||||||| |||| ||  ||||| || |    
T  35852495 aaattgcaattttgttccgaataagcaaatactcacgagtaaaattttgttctctaattttataggcatggttagaacatcataaaaactttcaccataa 35852594  T
Q  358 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    |   ||| ||||||||| | || ||| |||||||||| ||||||||||| ||||||||||||    
T  35852595 aaaattggagtttttaatcaagggaccaattaattatgaattgtttaagaaattcataatta 35852656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 14156217 - 14156163
Alignment:
Q  128 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  14156217 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 14156163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 257 - 399
Target Start/End: Original strand, 32964064 - 32964206
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||| | ||||||||  ||||||| | || |||| ||||||||||||||||||||| || | |||||| ||| ||||| ||||| | |||||| ||     
T  32964064 aaaattgcatttttgttcagagtaagcatttaatcacgggtcaaatttcgttccctaattttgttagcatgtttataacatcataaggaccttcaccatt 32964163  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt 399  Q
    |||||||  ||||||||||||| |  |||||||||||| ||||    
T  32964164 aagttttagagtttttaaacgataagcaaattaattatgaatt 32964206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 419
Target Start/End: Original strand, 15541743 - 15541935
Alignment:
Q  226 atttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagca 325  Q
    ||||||||| |||||  |||||||| |||||||| || || ||||||||  | ||||| ||||||||   ||||||||  |||||||||| || ||  ||    
T  15541743 atttattttaattttccaacaaaaatgtgcaaaattttaa-ttttgttcacattaagcatatactcaggagtcaaattatgttccctaattttgtataca 15541841  T
Q  326 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    ||||||||||||| |||||| |||||| || || ||| | ||||| ||||| |||||| |||  ||||| ||||||||||  ||||||| ||||    
T  15541842 tggttagaacatagtaagaaccttcaccattaaatttgggagtttctaaacaagagacgaatcgattatgaattgtttaaaaaattcatgatta 15541935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 36409086 - 36409020
Alignment:
Q  330 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataa 396  Q
    |||||||| || |||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  36409086 tagaacatgattagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattataa 36409020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 397
Target Start/End: Original strand, 29892039 - 29892250
Alignment:
Q  182 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 281  Q
    |||||| |||||||||| |||| ||||||||||| || | || ||||  ||||||||||  ||| |||| ||||  |||||| |||||||||   |||||    
T  29892039 taaaaagaatttgcaaaattttgtagcatttcaaagatg-tttaatt--tttttatttttcaaccaaaacgtgc-gaaattgcaattttgttatgagtaa 29892134  T
Q  282 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 381  Q
      |||||||||| ||||||||||| ||| ||||| || ||||||||  || ||||| |||||||  |||    |||| ||||  |||||||||||||||     
T  29892135 atgtatactcacgggtcaaatttctttctctaattttctaagcatgtatataacatcataagaactttcctcgtgaatttttagagtttttaaacgagat 29892234  T
Q  382 acaaattaattataaa 397  Q
    || |||||||||||||    
T  29892235 acgaattaattataaa 29892250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 20178432 - 20178363
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 189  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20178432 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20178363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 20223160 - 20223091
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 189  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20223160 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 223 - 352
Target Start/End: Complemental strand, 33639282 - 33639154
Alignment:
Q  223 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 322  Q
    |||||||||||| |||||  ||| |||| |||| ||||||| ||||||  ||| ||||||| |||||||||   |||||||| |||||||||| || ||     
T  33639282 tcaatttattttgatttttcaaccaaaacgtgc-aaaattgcaatttttctccaagtaagcatatactcacacatcaaattttgttccctaattttgtag 33639184  T
Q  323 gcatggttagaacataataagaatcttcac 352  Q
    ||||||||| ||||| ||| |||| |||||    
T  33639183 gcatggttacaacattataggaatattcac 33639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 32750434 - 32750371
Alignment:
Q  354 atgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 417  Q
    ||||| ||||| ||||||||||||||| || |||||||||| ||||||||| | ||||||||||    
T  32750434 atgaaattttggagtttttaaacgagatacgaattaattatgaattgtttatgaaattcataat 32750371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 421
Target Start/End: Original strand, 3672247 - 3672327
Alignment:
Q  340 taagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    |||||| |||||| ||||| ||| | |||||||||| ||  ||| |||||||||| ||||||||||| ||||||||||||||    
T  3672247 taagaaccttcaccatgaaatttgg-agtttttaaatgaatgacgaattaattatgaattgtttaaggaattcataattatg 3672327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 14577154 - 14577217
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  14577154 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 14577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 15863285 - 15863336
Alignment:
Q  360 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaatt 411  Q
    ||||| ||||||||||||||| || |||||||||| ||||||||||| ||||    
T  15863285 ttttggagtttttaaacgagatacgaattaattatgaattgtttaagaaatt 15863336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 17480101 - 17479956
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    |||||||||||||||||||   | | || |||||||||| |||||  ||| |||| |||  ||||||| |||||| |||  ||||| | |||||||||      
T  17480101 aaagttttatagcatttcataaaagcttgaatttattttgatttttcaaccaaaatgtg-taaaattgcaattttcttctgagtaaacatatactcacga 17480003  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataa 342  Q
    ||||||||| |||||||||| || || |||| ||| |||||| ||||    
T  17480002 gtcaaattttgttccctaattttgtaggcatagttggaacatcataa 17479956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 30928371 - 30928309
Alignment:
Q  123 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 185  Q
    |||||||||| |||| ||||||||||| ||||||| ||||| | || |||||||||| |||||    
T  30928371 aataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttgtctaaa 30928309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 35482990 - 35483052
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35482990 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 17844167 - 17844224
Alignment:
Q  122 aaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttg 179  Q
    |||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||    
T  17844167 aaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 30928601 - 30928658
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30928601 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 6e-52; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 41971746 - 41971977
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtata 288  Q
    ||||| |||||||||||||||||||| | || || |||||||||| |||||  ||| ||||| |||||||| ||||||||||||||   |||||||||||    
T  41971746 atttgtaaagttttatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaaacgtgcaaaa-ttgaaattttgttcagcgtaagcgtata 41971844  T
Q  289 ctcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||| ||||||||||  ||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||  | |||||    
T  41971845 ctcacaggtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgaggtataaatt 41971944  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  41971945 aattataaattgtttaagaaattcataattatg 41971977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 3829659 - 3829430
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||    
T  3829659 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 3829561  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 389  Q
    ||||  ||||||||| |||||||||  || || |||||  |||||||| ||||||| ||||||||||||  |||| ||||||||||||||| ||||||||    
T  3829560 tcacaagtcaaatttagttccctaactttgtaggcatgactagaacatgataagaaccttcacaatgaa-atttgtagtttttaaacgagatacaaatta 3829462  T
Q  390 attataaattgtttaagtaattcataattatg 421  Q
    ||||||||||||||||| ||||||||||||||    
T  3829461 attataaattgtttaagaaattcataattatg 3829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 11957845 - 11958069
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| ||| |||||||||||   |||||||||||||||      
T  11957845 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgcaattttgttccgcataagcgtatactcacaa 11957943  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||   ||| ||||| || || ||||| ||||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  11957944 gtcaaattcaattcactaattttctaggcatgattagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattata 11958043  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    |||| |||||| ||||||||||||||    
T  11958044 aattatttaagaaattcataattatg 11958069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 196 - 419
Target Start/End: Complemental strand, 35908199 - 35907977
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35908199 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35908101  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35908100 gtcaaatttagttccctaattttgtatgcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35908001  T
Q  396 aattgtttaagtaattcataatta 419  Q
    ||||||||||| ||||||||||||    
T  35908000 aattgtttaagaaattcataatta 35907977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 17445965 - 17445741
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||||||||  ||||||||||||||||      
T  17445965 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaaccaaaacttgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17445867  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| ||||| |||||| ||||| ||| ||||||||||| ||||||||||||||    
T  17445866 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcataatgaaattttgtagtctttaaacgagatacaaattaattata 17445767  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  17445766 aattgtttaagaaattcataattatg 17445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 7434033 - 7433869
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| | ||||| ||||||||||    
T  7434033 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatg 7433934  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  7433933 aaattttgtaatttttaaacgagatacaaattaattataaattgttaaagaaattcataattatg 7433869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 42310495 - 42310659
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  42310495 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 42310594  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| | ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  42310595 aaattttgtaatttttaaactagatacaaattaattataaattgtttaagaaattcataattatg 42310659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 32981551 - 32981775
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| |||||||||||||||  |||||| | |||||||      
T  32981551 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatttactcacaa 32981649  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| ||||||||| || ||||  | ||||| ||||||| ||||||||||||||    
T  32981650 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttataatttttcaacgagatacaaattaattata 32981749  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  32981750 aattgtttaagaaattcataattatg 32981775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 257 - 420
Target Start/End: Complemental strand, 23313606 - 23313443
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||||||||||||||   |||||||||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  23313606 aaaattgaaattttgttctgcgtaagcgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 23313507  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 420  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  23313506 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaataaattcataattat 23313443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 278 - 421
Target Start/End: Complemental strand, 33490296 - 33490153
Alignment:
Q  278 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 377  Q
    |||||||||||| | |  ||||||||| |||||||||| || || |||||  |||||||| |||| || |||||||||||| ||||| ||||||||||||    
T  33490296 gtaagcgtatacccgcaagtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcacaatgaaattttgtagtttttaaacg 33490197  T
Q  378 agagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||| || |||||||||||||||||||||| ||||||||||||||    
T  33490196 agatacgaattaattataaattgtttaagaaattcataattatg 33490153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 222 - 420
Target Start/End: Complemental strand, 28463582 - 28463396
Alignment:
Q  222 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 321  Q
    ||||||||||||| |||||  ||| ||||  ||||||| ||||||||||||||| | ||||||||||||||| ||||||| ||  ||||||||| ||  |    
T  28463582 ttcaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttgttccgaataagcgtatactcacaggtcaaaattaattccctaattttgca 28463484  T
Q  322 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 420  Q
     |||||  ||||||           |||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  28463483 ggcatgactagaac-----------cttcacaatgaaattttgtagtttttaaacgaaatacaaattaattataaattgtttaagaaattcataattat 28463396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 277 - 419
Target Start/End: Complemental strand, 32944499 - 32944357
Alignment:
Q  277 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 376  Q
    ||||||| ||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| |||||||  ||||| ||||||||||| ||||||   |     
T  32944499 agtaagcatatactcactgatcaaattttgttccctaattttataagcatgcttagaacatcataagaacattcaccatgaagttttggagttttcggaa 32944400  T
Q  377 gagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    | |  |  |||||||||| ||||||||||| ||||||||||||    
T  32944399 gtggaaataattaattatgaattgtttaagaaattcataatta 32944357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 265 - 399
Target Start/End: Original strand, 5715373 - 5715507
Alignment:
Q  265 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 364  Q
    ||||||||||| ||||||  |||| ||||||||||||||| ||||  |||| || || ||||||||| ||||| ||||||| |||||| || || |||||    
T  5715373 aattttgttccgagtaagtatatattcactggtcaaattttgttctataattttgtaggcatggttaaaacatcataagaaacttcaccataaaattttg 5715472  T
Q  365 cagtttttaaacgagagacaaattaattataaatt 399  Q
     | ||||||||||||| || |||||||||| ||||    
T  5715473 gaatttttaaacgagatacgaattaattatgaatt 5715507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 7350228 - 7350303
Alignment:
Q  298 caaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagttttta 373  Q
    |||||||||||| ||||| || ||||||||||||||| || |||||||||||||| ||||| ||||  ||||||||    
T  7350228 caaatttcgttcactaattttgtaagcatggttagaatatcataagaatcttcaccatgaaattttagagttttta 7350303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 33774691 - 33774629
Alignment:
Q  360 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    |||||||||||||||||| ||||| |||| ||||| ||||||||||| | |||||||||||||    
T  33774691 ttttgcagtttttaaacgggagacgaatttattatgaattgtttaagaagttcataattatgg 33774629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 277 - 418
Target Start/End: Original strand, 18716322 - 18716463
Alignment:
Q  277 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 376  Q
    ||||||| |||| |||| ||||||||||  ||||||||| |||||  |||||||||||||| ||||||| |||||  || || ||||      |||||||    
T  18716322 agtaagcatatattcacgggtcaaattttattccctaattttatagacatggttagaacatcataagaaccttcaacataaaatttttagagatttaaac 18716421  T
Q  377 gagagacaaattaattataaattgtttaagtaattcataatt 418  Q
     ||||   |||||||||| ||||||||||| |||||||||||    
T  18716422 aagaggtgaattaattatgaattgtttaagaaattcataatt 18716463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 420
Target Start/End: Complemental strand, 3604863 - 3604699
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||  |||||||| | ||||||  ||||||||  ||||||||||  ||||||||| || || ||||||||||||||| |||| ||   || | | |    
T  3604863 aaaattgctattttgtttcgagtaagtatatactcaagggtcaaattttattccctaattttgtaggcatggttagaacatcataaaaacggtcgccacg 3604764  T
Q  357 -aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 420  Q
     || ||||| ||||||||||||| | |||||||||| || ||| ||||||| |||||||| ||||    
T  3604763 aaaattttggagtttttaaacgaaaaacaaattaataattaatagtttaagaaattcatagttat 3604699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 12115240 - 12115300
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||||    
T  12115240 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaa 12115300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 257 - 352
Target Start/End: Complemental strand, 42412464 - 42412370
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 352  Q
    ||||||| ||||||||||| | || |||||||||||| |||||||||||||| ||||||  | ||   ||||||| ||||| ||||||||||||||    
T  42412464 aaaattgcaattttgttccgaata-gcgtatactcacaggtcaaatttcgtttcctaattctgtagatatggttaaaacatcataagaatcttcac 42412370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 399
Target Start/End: Complemental strand, 17744802 - 17744594
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||| ||| |||||||||||| ||   ||| |||||||||||||||  | | |||| |||| ||| ||| |||| | |||  ||||||| |||||    
T  17744802 atttgaaaaatttcatagcatttcaaagatttttcgatttatttttattttttagccaaaacgtgcgaaa-ttgcaattctattcagagtaagcatatac 17744704  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 389  Q
    | || |||||||||| ||||  |||| || || | ||||||||||||| ||||||| |||||  ||||| ||||| | |||| ||| |||| |  |||||    
T  17744703 tgacgggtcaaattttgttctataattttgtaggaatggttagaacatcataagaaacttcaacatgaaattttggaattttaaaatgagatatgaatta 17744604  T
Q  390 attataaatt 399  Q
    ||||| ||||    
T  17744603 attatgaatt 17744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 7113926 - 7113863
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 183  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||    
T  7113926 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccta 7113863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 19897233 - 19897170
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || | |||||||||| |||||    
T  19897233 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttgccaaaaaa 19897170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  127 aaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    ||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 380 - 422
Target Start/End: Original strand, 9901670 - 9901712
Alignment:
Q  380 agacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  9901670 agacaaattaattatgaattatttaagaaattcataattatgg 9901712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 17611713 - 17611775
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  17611713 ataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcctaaaa 17611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 25780173 - 25780239
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||| |||||||    
T  25780173 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttacctaaaa 25780239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 4e-50; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 3292392 - 3292616
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  3292392 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3292490  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  3292491 gtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 3292590  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  3292591 aattgtttaagaaattcataattatg 3292616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 28876810 - 28877034
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  28876810 aaagtttcatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcttatactcacaa 28876908  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| | ||||||||||||    
T  28876909 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatagaaattaattata 28877008  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  28877009 aattgtttaagaaattcataattatg 28877034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 6236181 - 6235957
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6236181 aaagtttcatagcatttcgaagtggtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6236083  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  6236082 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 6235983  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  6235982 aattgtttaagaaattcataattatg 6235957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 6689731 - 6689955
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  6689731 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6689829  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    |||||||||  ||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| |||||||||||  |||||||||||||    
T  6689830 gtcaaatttaattccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagattcaaattaattata 6689929  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  6689930 aattgtttaagaaattcataattatg 6689955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 225 - 421
Target Start/End: Original strand, 29995507 - 29995703
Alignment:
Q  225 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 324  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  29995507 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 29995605  T
Q  325 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    |||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29995606 atgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 29995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 43143080 - 43143304
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43143080 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43143178  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43143179 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43143278  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  43143279 aattgtttaagaaattcataattatg 43143304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 20129993 - 20129762
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  20129993 atttgtaaagtttcatagcatttcgaaatcgttttaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 20129895  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  20129894 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 20129795  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  20129794 aattataaattgtttaagaaattcataattatg 20129762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 26438766 - 26438997
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26438766 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26438864  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26438865 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26438964  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  26438965 aattataaattgtttaagaaattcataattatg 26438997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 34406771 - 34407002
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  34406771 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 34406869  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  34406870 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 34406969  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  34406970 aattataaattgtttaagaaattcataattatg 34407002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 43356584 - 43356353
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  43356584 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 43356486  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  43356485 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 43356386  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  43356385 aattataaattgtttaagaaattcataattatg 43356353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 47501453 - 47501222
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  47501453 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 47501355  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  47501354 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 47501255  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  47501254 aattataaattgtttaagaaattcataattatg 47501222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 196 - 419
Target Start/End: Original strand, 33135940 - 33136162
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| |||||||| | || || || ||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||| ||||||||||       
T  33135940 aaagtttcatatcatttcaaagtcgtttaaaattattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaaacgtatactcataa 33136038  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||| | ||||||||||| ||| ||||||||||||||    
T  33136039 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaatttcgtagtttttaaacaagatacaaattaattata 33136138  T
Q  396 aattgtttaagtaattcataatta 419  Q
    ||||||||||| ||||||||||||    
T  33136139 aattgtttaagaaattcataatta 33136162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 42333270 - 42333495
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42333270 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42333368  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  42333369 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 42333468  T
Q  396 aattg-tttaagtaattcataattatg 421  Q
    ||||| |||||| ||||||||||||||    
T  42333469 aattgttttaagaaattcataattatg 42333495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 10352439 - 10352604
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  10352439 aaaattgaaattttgttccgtgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacaatg 10352538  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    || ||||| | ||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  10352539 aaattttgtactttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 10352604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 25931381 - 25931157
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||||| |||||      
T  25931381 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtattctcacaa 25931283  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| | || ||||| | ||||||||||||| ||||||||||||||    
T  25931282 gtcaaatttagttccctaattttgtaggcatgactaaaacatgataagaaccttcacagttaaattttgtaatttttaaacgagatacaaattaattata 25931183  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  25931182 aattgtttaagaaattcataattatg 25931157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 35546623 - 35546400
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35546623 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35546525  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35546524 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35546426  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    |||| |||||| ||||||||||||||    
T  35546425 aattatttaagaaattcataattatg 35546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 13012868 - 13012637
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  13012868 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 13012770  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  13012769 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 13012670  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    ||||||||||| |||||| ||||||||||||||    
T  13012669 aattataaattatttaagaaattcataattatg 13012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 17510723 - 17510951
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || ||||||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  17510723 aaagtttcatagcatttcgaagtcgtttcaatttattttgatttttgaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17510821  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacata----ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 391  Q
    ||||||||| |||||||||| || || | |||  ||||||| |    ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||    
T  17510822 gtcaaatttagttccctaattttgtaggtatgactagaacaaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaat 17510921  T
Q  392 tataaattgtttaagtaattcataattatg 421  Q
    ||||||||||||||| ||||||||||||||    
T  17510922 tataaattgtttaagaaattcataattatg 17510951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 36381836 - 36382065
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||| ||||  ||||||||||||    
T  36381836 atttgtaaagtttcatagcatttcgaattcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttattccgcgtaagcgtatac 36381934  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 389  Q
    ||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||    
T  36381935 tcacaag-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttgtaatttttaaacgagatacaaatta 36382033  T
Q  390 attataaattgtttaagtaattcataattatg 421  Q
    ||||||||||||||||| ||||||||||||||    
T  36382034 attataaattgtttaagaaattcataattatg 36382065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 48990000 - 48989776
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| |||| |||| ||| |||||||||||||||  |||||||||||| |||      
T  48990000 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatacccacaa 48989902  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    |||||||||  ||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| |||||||||| |||    
T  48989901 gtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttttagtttttaaacgagatacaaattaatcata 48989802  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  48989801 aattgtttaagaaattcataattatg 48989776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 30077191 - 30077356
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||||| ||||  ||||||||| |||||| ||| || || ||||| ||| ||||| ||||||| ||||||||||    
T  30077191 aaaattgaaattttgttccgcgtaagtgtatattcacaagtcaaatttagttcccaaattttgtaggcatgattataacatgataagaaccttcacaatg 30077290  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    || ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  30077291 aaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 30077356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 228 - 421
Target Start/End: Complemental strand, 48130617 - 48130425
Alignment:
Q  228 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 327  Q
    ||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  |||||| || |||||||||| || || |||      
T  48130617 ttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaaattagttccctaattttgtaggcaat 48130519  T
Q  328 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
      |||||||| ||||||| ||||||||| || | ||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  48130518 actagaacatgataagaaccttcacaataaaatattgtagtttttaaacgacatacaaattaattataaattgtttaagaaattcataattatg 48130425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 222 - 420
Target Start/End: Original strand, 29134152 - 29134349
Alignment:
Q  222 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 321  Q
    |||||||||||||||||||  ||| |||| ||   ||||||||||||||||||||||||   |||||||||  |||||||||| |||| ||||| || ||    
T  29134152 ttcaatttatttttatttttcaaccaaaacgt-ttaaaattgaaattttgttcctagtatttgtatactcataggtcaaattttgttctctaattttgta 29134250  T
Q  322 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 420  Q
     ||| | |||||||||||||||||  ||||||||||| |||||| |||| |||||| || | ||||||||| ||||||| ||||| |||||||| ||||    
T  29134251 ggcaagattagaacataataagaaatttcacaatgaaattttgctgtttataaacgtgacaaaaattaattttaaattgattaagaaattcatagttat 29134349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 30110634 - 30110410
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||| |||   ||||||| |||||||| |    
T  30110634 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttattctgcgtaagcgcatactcacag 30110536  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| ||||| |||| || || |||||   | ||||| |||| ||  ||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  30110535 gtcaaatttagttccttaattttgtaggcatgacaataacatgataataacattcacaatgaaattttgtagtttttaaacgagatacaaattagttata 30110436  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    || |||||||| |||| |||||||||    
T  30110435 aagtgtttaagaaatttataattatg 30110410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 30216301 - 30216462
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||  || ||    
T  30216301 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctt--cagtg 30216398  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| ||| |||||| |||| |||| ||||||||||||||||| || ||||||||||||||    
T  30216399 aaattttgtagtctttaaatgagatacaagttaattataaattgttt-agaaattcataattatg 30216462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 285 - 421
Target Start/End: Complemental strand, 40529600 - 40529464
Alignment:
Q  285 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 384  Q
    |||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||| || |||||||||||| ||||| | ||||||||| ||| |||    
T  40529600 tatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataaaaaccttcacaatgaaattttgtaatttttaaacaagataca 40529501  T
Q  385 aattaattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||||||| ||||||||||||||    
T  40529500 aattaattataaattgtttaagaaattcataattatg 40529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 330 - 419
Target Start/End: Original strand, 13394870 - 13394959
Alignment:
Q  330 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  13394870 tagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataatta 13394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 50204643 - 50204797
Alignment:
Q  257 aaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat 355  Q
    |||||||||||||| |||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||           ||||||| |||||||||    
T  50204643 aaaattgaaatttttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatg-----------ataagaaccttcacaat 50204731  T
Q  356 gaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||| ||||| ||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  50204732 gaaattttgtagtctttaaacgagatataaattaattataaattgtttaagaaattcataattatg 50204797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 258 - 422
Target Start/End: Complemental strand, 9415509 - 9415345
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    |||||| ||||||||| | |||||||||||||| ||  |||||||| ||||| ||||| || ||  |||||| |||| || |||| || |||| | || |    
T  9415509 aaattgcaattttgtttcgagtaagcgtatacttacgagtcaaattccgttctctaattttttagacatggtcagaatatcataaaaaccttcgccataa 9415410  T
Q  358 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    | |||||  |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||    
T  9415409 aattttggggtttttaaacgagatacaaatttattatgaattgtttaagaaattcataattatgg 9415345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 259 - 422
Target Start/End: Original strand, 4038262 - 4038425
Alignment:
Q  259 aattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaa 358  Q
    ||||| ||||||||||| ||||| | ||||||||| |||| |||||||||| ||||| || || | ||||||  ||| | |||||||  ||||| |||||    
T  4038262 aattgcaattttgttccgagtaaacctatactcacaggtctaatttcgttctctaattttgtaggtatggttttaacttcataagaactttcaccatgaa 4038361  T
Q  359 gttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
     ||||| || |||||||||||| | |||||| |||| ||||| ||||| |||||||||||||||    
T  4038362 attttggaggttttaaacgagatataaattagttatgaattgcttaagaaattcataattatgg 4038425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 195 - 406
Target Start/End: Original strand, 13502113 - 13502322
Alignment:
Q  195 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 294  Q
    |||||||| |||||||||||| || | || |||||| |||  |||| || ||||| | ||||||| ||| ||||||||||| ||||||| ||||| ||      
T  13502113 caaagtttcatagcatttcaaagatgttttaatttactttatttttcaatcaaaacg-tgcaaaa-ttgcaattttgttccaagtaagcatatacacatg 13502210  T
Q  295 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 394  Q
    | ||||||||| ||||||||| || || ||||| | ||||||| |||||||  | ||| ||||| ||||| |||||||||| |||||||  |||||||||    
T  13502211 gatcaaatttccttccctaattttgtaggcatgctcagaacatcataagaacttacaccatgaaattttggagtttttaaatgagagacggattaattat 13502310  T
Q  395 aaattgtttaag 406  Q
     |||||||||||    
T  13502311 gaattgtttaag 13502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 258 - 420
Target Start/End: Original strand, 26546856 - 26547017
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    |||||| ||||||||||  ||||||||||||||||| ||||||||| ||||| ||||| || || |||| |||||||||| |||||||  || || ||||    
T  26546856 aaattgcaattttgttctgagtaagcgtatactcacgggtcaaattccgttctctaattttgtaggcattgttagaacatcataagaacatttaccatga 26546955  T
Q  358 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 420  Q
    | ||||  |||||||||| ||   ||||||||||||| |||| |||||| | |||||||||||    
T  26546956 aattttagagtttttaaaagacgtacaaattaattatgaattttttaag-atttcataattat 26547017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 29094683 - 29094594
Alignment:
Q  333 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||| ||||||| |||||| ||||| ||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||||||||    
T  29094683 aacatcataagaaccttcaccatgaaattttgaagtttttaaacgagatacgaattaattatgaattgtttaagaaattcataattatgg 29094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 209 - 422
Target Start/End: Complemental strand, 31853885 - 31853673
Alignment:
Q  209 atttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgtt 308  Q
    ||||||| |||| ||| ||||||||| |||||  ||| ||||  ||| ||| ||| |||||||| |  |||||| |||||||||| ||||||||| ||||    
T  31853885 atttcaaagacgtttctatttattttaatttttcaaccaaaacatgcgaaa-ttgcaattttgtactgagtaagtgtatactcacgggtcaaattacgtt 31853787  T
Q  309 ccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagta 408  Q
       |||| || || ||||||||||||| | ||||||| |||||| || ||  |||| ||| ||||| ||| | ||||||||||||| ||||||||||| |    
T  31853786 ttttaattttgtaggcatggttagaacgtcataagaaccttcaccataaaaatttggagtgtttaaccgaaatacaaattaattatgaattgtttaagaa 31853687  T
Q  409 attcataattatgg 422  Q
    ||||||| ||||||    
T  31853686 attcatacttatgg 31853673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 222 - 422
Target Start/End: Complemental strand, 56225950 - 56225750
Alignment:
Q  222 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttat 320  Q
    |||||||||||||||||||  ||| |||| |||||||| ||| |||||| ||| |  |||| | ||||||||  |||||||||||||||| |||| || |    
T  56225950 ttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgcaattttcgtttcgggtaaacatatactcatgggtcaaatttcgttccataattttgt 56225852  T
Q  321 aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 420  Q
    | ||||||||||||||| | ||||| |||||| |     ||||  |||||||||| ||||||||| ||||||||  |||||| ||| |||||||||||||    
T  56225851 aggcatggttagaacatcacaagaaccttcaccaaatttttttatagtttttaaatgagagacaatttaattatggattgttaaagaaattcataattat 56225752  T
Q  421 gg 422  Q
    ||    
T  56225751 gg 56225750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 330 - 421
Target Start/End: Complemental strand, 1818256 - 1818164
Alignment:
Q  330 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    |||||||| || |||| |||||||||||| ||||| |||||| |||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  1818256 tagaacatgattagaaccttcacaatgaaattttgtagttttcaaacgagatacaaattaattataagttagtttaagaaattcataattatg 1818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 13390943 - 13391061
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || ||||| |||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  13390943 aaagtttcatagcatttcgaagtcgtttaaatttcttttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactaacaa 13391041  T
Q  296 gtcaaatttcgttccctaat 315  Q
    ||||||||| ||||||||||    
T  13391042 gtcaaatttagttccctaat 13391061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 21360514 - 21360451
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||    
T  21360514 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgccaaaaaa 21360451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 30055488 - 30055555
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    ||||| |||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||||||||    
T  30055488 aaaaaaaaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaaaaa 30055555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 375
Target Start/End: Original strand, 49062453 - 49062626
Alignment:
Q  201 tttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaa 300  Q
    ||||||||||||| | ||||  |||||||||||| |||||  ||| |||| |||| ||||||| ||||| ||||| ||| | ||||||||||| ||||||    
T  49062453 tttatagcatttcgaagacgcctcaatttattttgatttttcaactaaaatgtgc-aaaattgcaatttcgttccaagtgatcgtatactcacaggtcaa 49062551  T
Q  301 atttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaa 375  Q
     ||||| || ||| | ||  | ||| |||||||| || ||| ||| |||||| ||||| ||||  ||||||||||    
T  49062552 ttttcgctcactagttttgaaggcaaggttagaatattatatgaaccttcaccatgaaattttagagtttttaaa 49062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 339 - 422
Target Start/End: Complemental strand, 5290970 - 5290887
Alignment:
Q  339 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||  |  ||| |||||||||||||||    
T  5290970 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattatgaataatccaagaaattcataattatgg 5290887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 420
Target Start/End: Original strand, 20629019 - 20629245
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    |||||||||| |||||||||| | || | ||| || ||||||||||||  ||| ||||  | ||||| ||| |||||| |||| ||||| | ||||||||    
T  20629019 tgcaaagtttcatagcatttcgaagatgtttctatctatttttatttttcaaccaaaacatacaaaa-ttgcaattttattccgagtaaacatatactca 20629117  T
Q  293 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
    | | | ||||||  ||| ||| |  |||  |||||||||||||||  |||||| ||| |  |  ||  |||| ||||||||||||||| || ||||||||    
T  20629118 cggatgaaatttaattctctatttctattggcatggttagaacatcgtaagaacctttatcaaaaaaatttggagtttttaaacgagatacgaattaatt 20629217  T
Q  393 ataaattgtttaagtaattcataattat 420  Q
    |  | ||||||||| |||||||||||||    
T  20629218 aagagttgtttaagaaattcataattat 20629245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 26448538 - 26448499
Alignment:
Q  382 acaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  26448538 acaaattaattataaattgtttaagaaattcataattatg 26448499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 339 - 418
Target Start/End: Complemental strand, 54933538 - 54933459
Alignment:
Q  339 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 418  Q
    |||||||  ||||| ||||| ||||| |||||||||| || | || ||||||||||||||||||| || |||||||||||    
T  54933538 ataagaaatttcaccatgaaattttggagtttttaaatgataaacgaattaattataaattgttttagaaattcataatt 54933459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 310
Target Start/End: Complemental strand, 44157295 - 44157182
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||| ||||  ||||||||||||||||      
T  44157295 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttattccgcgtaagcgtatactcacaa 44157197  T
Q  296 gtcaaatttcgttcc 310  Q
    ||||||||| |||||    
T  44157196 gtcaaatttagttcc 44157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 257 - 418
Target Start/End: Complemental strand, 9070891 - 9070730
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||| |||||||||   ||||||| |||||| || ||||||| |  |||||||| | || || || || ||||||||| |||| ||||||||| ||     
T  9070891 aaaattgcaattttgttatgagtaagcatatactgacgggtcaaactctgttccctagttttgtaggcttgcttagaacatcataataatcttcaccata 9070792  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 418  Q
    || ||||| |||||| ||| ||  ||  ||| |||||| |||||| |||| |||||||||||    
T  9070791 aaattttggagttttgaaatgatggatgaatcaattatgaattgtataagaaattcataatt 9070730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 30799612 - 30799668
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 180  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||    
T  30799612 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 422
Target Start/End: Original strand, 2941119 - 2941242
Alignment:
Q  299 aaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaat 398  Q
    |||||| |||||||||| || || |||| |||| ||||| |   |||| ||||  ||||| ||||  |||||||||||||| ||  ||| ||||||||||    
T  2941119 aaattttgttccctaattttttaggcatagttaaaacatcaatcgaatattcaacatgaaattttagagtttttaaacgagggatgaataaattataaat 2941218  T
Q  399 tgtttaagtaattcataattatgg 422  Q
    | |||||| ||||| |||||||||    
T  2941219 tatttaagaaattcttaattatgg 2941242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 26449393 - 26449291
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || ||||||||||  ||||  ||  |||| |||||||| |||||||||||||||  ||||||||||||    
T  26449393 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgttttttcaatcaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26449295  T
Q  290 tcac 293  Q
    ||||    
T  26449294 tcac 26449291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 37872824 - 37872761
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||| |||||    
T  37872824 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaa 37872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 40529698 - 40529651
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaattt 304  Q
    |||||||||||||||||||  ||||||||||||||||  |||||||||    
T  40529698 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaattt 40529651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 46143555 - 46143622
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    |||||||||||||||||  |||||||||||  |||||| || || | || ||||||||||||||||||    
T  46143555 aaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcctaaaaa 46143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 13294891 - 13294953
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  13294891 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 13294953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 25297737 - 25297679
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  25297737 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 418
Target Start/End: Original strand, 18625554 - 18625603
Alignment:
Q  369 ttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 418  Q
    ||||||||||| |||||||||||||| |||| || ||| |||||||||||    
T  18625554 ttttaaacgagtgacaaattaattatgaatttttaaagaaattcataatt 18625603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 9e-48; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 40081235 - 40081459
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  40081235 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 40081333  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||||||    
T  40081334 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaattata 40081433  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  40081434 aattgtttaagaaattcataattatg 40081459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 6930389 - 6930613
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6930389 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6930487  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||| ||| ||||| ||| ||||||||||| ||||||||||||||    
T  6930488 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaaggaaattttgtagtctttaaacgagatacaaattaattata 6930587  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| | ||||||||||||    
T  6930588 aattgtttaagaagttcataattatg 6930613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 6268913 - 6269144
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6268913 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6269011  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6269012 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6269111  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  6269112 aattataaattgtttaagaaattcataattatg 6269144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 22967931 - 22968162
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  22967931 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 22968029  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  22968030 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 22968129  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  22968130 aattataaattgtttaagaaattcataattatg 22968162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 225 - 421
Target Start/End: Complemental strand, 27935818 - 27935624
Alignment:
Q  225 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 324  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  27935818 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 27935720  T
Q  325 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    |||  |||||||| |||||||||||||||||||| ||||| |||||||||||| || |||||||||||| |||||||||||| ||||||||||||||    
T  27935719 atgactagaacattataagaatcttcacaatgaaattttgtagtttttaaacg-gatacaaattaattacaaattgtttaagaaattcataattatg 27935624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 5135959 - 5135735
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5135959 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5135861  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||| | |  || |||||  || ||||| ||||||| |||||||||||| ||||| |||||||||| |||| ||||||||||||||    
T  5135860 gtcaaatttagttccctattttcgtaggcatgactataacatgataagaaccttcacaatgaaattttgtagtttttaaatgagatacaaattaattata 5135761  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  5135760 aattgtttaagaaattcataattatg 5135735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 45183651 - 45183428
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45183651 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45183553  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45183552 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45183454  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    |||| |||||| ||||||||||||||    
T  45183453 aattttttaagaaattcataattatg 45183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 39772470 - 39772239
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39772470 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39772372  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||| | | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39772371 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataaggaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39772272  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  39772271 aattataaattgtttaagaaattcataattatg 39772239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 6503065 - 6503289
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| |||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6503065 aaagtttcatatcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6503163  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  ||||  || ||||||| ||||||| |||| ||| | ||| ||||||||||| ||||||||||||||    
T  6503164 gtcaaatttagttccctaattttgtaggcatgactagagtatgataagaaccttcacagtgaaatttcgtagtctttaaacgagatacaaattaattata 6503263  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  6503264 aattgtttaagaaattcataattatg 6503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 19390760 - 19390595
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaat 355  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||||| | ||||||||    
T  19390760 aaaattgaaattttgttccgcgtaagcgtatactcaccagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaat 19390661  T
Q  356 gaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||| ||||| |  |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  19390660 gaaattttgtaaattttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 19390595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 19565056 - 19565221
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||| ||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  19565056 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttctctaattttgtaggcatgattagaacatgataagaaccttcacaatg 19565155  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    || ||||| |||||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||    
T  19565156 aaattttgtagtttttaaatgagatacaaattaattataagttagtttaagaaattcataattatg 19565221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 226 - 417
Target Start/End: Original strand, 29564674 - 29564868
Alignment:
Q  226 atttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt---tc--gttccctaatctta 319  Q
    |||||||||||||||  ||| ||||| |||||||| || ||||||||||||||||||||||||||||||  ||||||||   ||  ||||| |||| ||     
T  29564674 atttatttttatttttcaaccaaaaacgtgcaaaattt-aaattttgttcctagtaagcgtatactcacatgtcaaattaaatcatgttccttaattttg 29564772  T
Q  320 taagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 417  Q
    || ||||||||||||||||||||||| |||||||||||| ||||  ||||||||||   |||||||||||||||||||||||||||| ||||||||||    
T  29564773 taggcatggttagaacataataagaaccttcacaatgaaattttatagtttttaaa--tgagacaaattaattataaattgtttaagaaattcataat 29564868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 34083615 - 34083838
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||| ||||||       
T  34083615 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtgtactcagaa 34083713  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  34083714 g-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatataaattaattata 34083812  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  34083813 aattgtttaagaaattcataattatg 34083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 45336485 - 45336320
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||| ||| || || ||||| ||||||||| ||||||| ||| ||||||    
T  45336485 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttcccaaattttgtaggcatgattagaacatgataagaacctttacaatg 45336386  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    || ||||| |||||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||    
T  45336385 aaattttgtagtttttaaatgagatacaaattaattataagttagtttaagaaattcataattatg 45336320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 33041561 - 33041400
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  |||||||||||| ||  |||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  33041561 aaaattgaaattttgttccgcgtaagcgtatacaca--ggtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 33041464  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| ||| |||||| |||| |||||||||||||||||||||| || ||||||||||||||    
T  33041463 aaattttgtagtctttaaatgagatacaaattaattataaattgttt-agaaattcataattatg 33041400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 8257517 - 8257407
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||  ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  8257517 tgcaaagtttcatagcatttcaaagacgtttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcctagtaagcgtatactca 8257419  T
Q  293 ctggtcaaattt 304  Q
    | | ||||||||    
T  8257418 cagatcaaattt 8257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 196 - 391
Target Start/End: Original strand, 11017765 - 11017959
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  11017765 aaagtttcatagcatttcgaagtcgtttaaatttattatgattttttaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatacttacaa 11017863  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 391  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||    
T  11017864 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaat 11017959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 27912615 - 27912456
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||| ||||||| ||  ||||||| ||||||||  |||||||||| |||||||||  ||  | |||||||| |||||| |||||||  | ||| |||    
T  27912615 aaaattgtaattttgatctgagtaagcatatactcataggtcaaattttgttccctaaatttgcaggcatggttggaacatgataagaacatgcaccatg 27912516  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataa 416  Q
    || ||||| |||||||||||||| |||||||||||||| ||||||||| | |||||||||    
T  27912515 aaattttggagtttttaaacgagggacaaattaattatgaattgtttatgaaattcataa 27912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 284 - 422
Target Start/End: Complemental strand, 35937806 - 35937668
Alignment:
Q  284 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 383  Q
    |||||||||| ||||||||| | | |  |||| || || |||| |||||||||| ||||||| |||||| ||||||||||| |||||||||| |||| ||    
T  35937806 gtatactcacgggtcaaattccatcctgtaattttgtaggcatagttagaacatcataagaaccttcaccatgaagttttggagtttttaaaagagatac 35937707  T
Q  384 aaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||||||||| ||||||||||| || ||||||| ||||    
T  35937706 aaattaattatgaattgtttaagaaactcataataatgg 35937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 38282936 - 38282857
Alignment:
Q  348 ttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 427  Q
    ||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38282936 ttcacaatgaaatcttgtagtttttaaacgagatacaaattaattataaattgtttaagaaattcataattatgggaaat 38282857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 339 - 421
Target Start/End: Complemental strand, 8257357 - 8257275
Alignment:
Q  339 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||||||| |||||||||||| ||||  ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||    
T  8257357 ataagaaccttcacaatgaaattttaaagtttttaaacgaaagaaaaattaattataaattgcttaagaaattcataattatg 8257275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 38415473 - 38415534
Alignment:
Q  366 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 427  Q
    ||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  38415473 agtttttaaactagagacaaattaattataaattatttaacaaattcatgattatggaaaat 38415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 52091714 - 52091773
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 183  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||||||||    
T  52091714 ataaaggacgaaaaagttaccaaaaaataagttgtgggactatttgtgtaattttgccta 52091773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 419
Target Start/End: Complemental strand, 7468899 - 7468757
Alignment:
Q  277 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 376  Q
    ||||||| ||||||||| | ||||||||||| | ||||| ||||| |||| ||||||||||||||| || |||||| |      |||  ||||||||||     
T  7468899 agtaagcttatactcacggttcaaatttcgtcctctaattttataggcatagttagaacataataaaaaccttcacgaaatttctttagagtttttaaat 7468800  T
Q  377 gagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    || | || |||||||||| ||||||| ||| ||||||||||||    
T  7468799 gaaaaacgaattaattatgaattgttaaagaaattcataatta 7468757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 52090939 - 52090881
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  52090939 ataaaggactaaaacgttacctaaaaataagttaagggactatttatataattttgcct 52090881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 3159292 - 3159388
Alignment:
Q  182 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagt 279  Q
    ||||||| || | |||| ||| |||||||||  | |||| |||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||    
T  3159292 taaaaacgatctacaaattttcatagcattttgaagacgtttcaatttatttttatttttcaaccaaaatgtgc-aaaattgaaattttgttcctagt 3159388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 3612656 - 3612591
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 185  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||| ||||||    
T  3612656 aaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttacctaaa 3612591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 19814766 - 19814847
Alignment:
Q  341 aagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||| |||||| ||||| ||||| ||||||||||||||| || ||| |||||| |||| |||||| ||| |||||||||||    
T  19814766 aagaaccttcaccatgaaattttgaagtttttaaacgagatacgaatcaattatgaattttttaagaaatacataattatgg 19814847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 414
Target Start/End: Original strand, 219189 - 219317
Alignment:
Q  286 atactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaa 385  Q
    |||||||  |||||||||| |||| ||||| || || ||||||||| ||||| | ||||| ||||||  | || ||||| || |||||||||||| | ||    
T  219189 atactcatgggtcaaattttgttctctaattttgtaggcatggttataacatcacaagaaacttcacctttaaattttggagattttaaacgagacaaaa 219288  T
Q  386 attaattataaattgtttaagtaattcat 414  Q
    ||||||| | ||||||||||  |||||||    
T  219289 attaattctgaattgtttaataaattcat 219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 5048446 - 5048383
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    ||||||||  ||||||||| |||||| ||||||| | ||| |||| ||||||||||||||||||    
T  5048446 ataaaggattaaaacgttatctaaaattaagttaagagactatttatgtaattttgcctaaaaa 5048383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 16094646 - 16094693
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttatttt 240  Q
    ||||||||||| ||||||||||| || | |||||||||||||||||||    
T  16094646 tgcaaagttttgtagcatttcaaagaagtttcaatttatttttatttt 16094693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 44506331 - 44506394
Alignment:
Q  123 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    ||||||||||||||| ||||||||||| ||||||| ||||  | || |||||||||||| ||||    
T  44506331 aataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcccaaaa 44506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 265 - 403
Target Start/End: Original strand, 10842155 - 10842293
Alignment:
Q  265 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 364  Q
    ||||||||||| ||||| | |||| ||||  ||||||||| ||||| |||   | || |||| |||| ||||| | |||||||||||| |||||  |||     
T  10842155 aattttgttccaagtaaacatatagtcacgtgtcaaattttgttccgtaactatttaggcattgttataacatgacaagaatcttcaccatgaaagttta 10842254  T
Q  365 cagtttttaaacgagagacaaattaattataaattgttt 403  Q
     | ||||||||||||  |  |||||||||||||||||||    
T  10842255 gaatttttaaacgaggaattaattaattataaattgttt 10842293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 17574434 - 17574372
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    |||||||||||||||||  ||||||||||| |||||||  |||| | || |||||||||||||    
T  17574434 aaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 22975629 - 22975695
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||| ||||||    
T  22975629 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgtctaaaa 22975695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 385 - 427
Target Start/End: Complemental strand, 40368715 - 40368673
Alignment:
Q  385 aattaattataaattgtttaagtaattcataattatggaaaat 427  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||    
T  40368715 aattatttatgaattgtttaagaaattcataattatggaaaat 40368673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 325 - 422
Target Start/End: Complemental strand, 5177420 - 5177323
Alignment:
Q  325 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    |||||||||  || |||||||| ||||  ||||| ||||  |||||||||| || |||  |||||| ||||||||||||||  |||||| ||||||||    
T  5177420 atggttagagaatcataagaattttcatcatgaaattttaaagtttttaaatgatagatgaattaagtataaattgtttaacaaattcaaaattatgg 5177323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 9e-48; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 45419254 - 45419030
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45419254 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45419156  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45419155 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45419056  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  45419055 aattgtttaagaaattcataattatg 45419030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 182 - 419
Target Start/End: Original strand, 7072016 - 7072252
Alignment:
Q  182 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 281  Q
    |||||| ||| || ||||||| |||||||||| |   ||||| |||||||||| |||||  ||| |||| |||||||| ||||||||||||||   ||||    
T  7072016 taaaaataatatgtaaagtttcatagcatttcgaaatcgattaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcagcgtaa 7072114  T
Q  282 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 381  Q
    |||||||| |||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| ||||||| ||||| |||| ||||||||||     
T  7072115 gcgtatacccacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcccaatgaaattttgtagttattaaacgagat 7072214  T
Q  382 acaaattaattataaattgtttaagtaattcataatta 419  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7072215 acaaattaattataaattgtttaagaaattcataatta 7072252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 17444528 - 17444759
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  17444528 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 17444626  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  17444627 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 17444726  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  17444727 aattataaattgtttaagaaattcataattatg 17444759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 31581175 - 31581339
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  31581175 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 31581274  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  31581275 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 31581339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 41251121 - 41251352
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  41251121 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 41251219  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  41251220 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 41251319  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  41251320 aattataaattgtttaagaaattcataattatg 41251352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 35963363 - 35963139
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35963363 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35963265  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  35963264 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 35963165  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||  ||||||||||||||    
T  35963164 aattgtttaataaattcataattatg 35963139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 6403291 - 6403522
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6403291 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6403389  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6403390 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6403489  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  6403490 aattataaattgtttaagaaattcataattatg 6403522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 12756393 - 12756557
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||   |||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12756393 aaaattgaaattttgttccgcataagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12756492  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12756493 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 12756557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 18982202 - 18982038
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| |||    
T  18982202 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatg 18982103  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| | ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  18982102 aaattttgtaatttttaaacgagataaaaattaattataaattgtttaagaaattcataattatg 18982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 196 - 419
Target Start/End: Original strand, 4554689 - 4554910
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| |||||| ||| || || |||||||||||||||| || ||||||| ||||||| |||||||||||||||  | ||||||||||| ||      
T  4554689 aaagtttcataacatttcgatgtcgtttaaatttatttttattttcaaccaaaaag-tgcaaaa-ttgaaattttgttccacgcaagcgtatactaacaa 4554786  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    |||||||||  ||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  4554787 gtcaaatttaattctctaattttgtaggcatgactagaacatgataagaacattcacaatgaaattttgtagtttttaaacgagatacaaattaattata 4554886  T
Q  396 aattgtttaagtaattcataatta 419  Q
    ||||||||||| ||||| ||||||    
T  4554887 aattgtttaagaaattcttaatta 4554910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 196 - 419
Target Start/End: Original strand, 32126683 - 32126905
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| ||| ||||||||||||||||||||  ||||||||||||||||      
T  32126683 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtg-aaaaattgaaattttgttccgcgtaagcgtatactcacaa 32126781  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| |||| || ||||| | |||| ||||| | ||||||||||||| ||||||||||||||    
T  32126782 gtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcaaagtgaaattttgtaatttttaaacgagatacaaattaattata 32126881  T
Q  396 aattgtttaagtaattcataatta 419  Q
    ||||||||||| ||||||||||||    
T  32126882 aattgtttaagaaattcataatta 32126905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 2957700 - 2957864
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| || |||||||    
T  2957700 aaaattgaaattttgttccgcgtaagggtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctacacaatg 2957799  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  2957800 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataaatatg 2957864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 2286460 - 2286237
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  2286460 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgtgtaagcgtatactcacaa 2286362  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    | ||||||| ||| |||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||| |||||||||    
T  2286361 g-caaatttagtttcctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaacttaattata 2286263  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  2286262 aattgtttaagaaattcataattatg 2286237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 26162198 - 26162422
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||| ||||      
T  26162198 aaagtttcatatcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatagtcacaa 26162296  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || | |||  |||||||| ||||| | ||||| |||||| ||||| ||||||||||||||| |||||||| |||||    
T  26162297 gtcaaatttagttccctaattttgtaggtatgactagaacatgataaggaccttcagaatgaaattttgtagtttttaaacgagatacaaattagttata 26162396  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||  ||||||||||||||    
T  26162397 aattgtttaaaaaattcataattatg 26162422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 258 - 422
Target Start/End: Original strand, 37621618 - 37621782
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    |||||| ||||||||||| ||||||| |||||||||   ||||| |  |||| ||||| || || ||||||||||||||| ||||||| |||||||||||    
T  37621618 aaattgcaattttgttccgagtaagcatatactcacgaatcaaagtctgttctctaattttgtaggcatggttagaacatcataagaaccttcacaatga 37621717  T
Q  358 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    | ||||| ||||||||||||||| || |||||||||| |||| |||||| |||||||||||||||    
T  37621718 aattttgaagtttttaaacgagatacgaattaattatgaattatttaagaaattcataattatgg 37621782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 193 - 415
Target Start/End: Complemental strand, 26591716 - 26591496
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    ||||||||||  ||||||||||| ||   |||||||||||||||||||  ||| |||| |||| ||| ||| ||||||| ||| ||||| ||||||||||    
T  26591716 tgcaaagtttcgtagcatttcaaagatatttcaatttatttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgatccgagtaaacgtatactca 26591618  T
Q  293 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
      ||||||||| | ||| ||||| || || ||||||||||| |||| |||||| |||||| | ||| ||||  ||||||||||||||| |||||||||||    
T  26591617 tgggtcaaattccattctctaattttttaggcatggttagaccata-taagaaccttcaccaagaaattttagagtttttaaacgagatacaaattaatt 26591519  T
Q  393 ataaattgtttaagtaattcata 415  Q
    || ||||||||||| ||||||||    
T  26591518 atgaattgtttaagaaattcata 26591496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 206 - 416
Target Start/End: Complemental strand, 18829518 - 18829309
Alignment:
Q  206 agcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttc 305  Q
    |||||||||| |||| ||| ||||||||| |||||  ||| |||| |||| ||| ||| ||||||||||| |||||| |||||||||| ||||||||| |    
T  18829518 agcatttcaaagacgtttcgatttattttaatttttcaacgaaaacgtgcgaaa-ttgcaattttgttccgagtaagtgtatactcacgggtcaaattcc 18829420  T
Q  306 gttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaa 405  Q
    |||| ||||| || || |||| |||||||||| |||||||  |||||  |||| ||| | ||||||||||| | | || |||||||||| ||||||||||    
T  18829419 gttctctaattttgtaggcatagttagaacatcataagaacattcaccgtgaaatttagaagtttttaaacaatatacgaattaattatgaattgtttaa 18829320  T
Q  406 gtaattcataa 416  Q
    | |||||||||    
T  18829319 gaaattcataa 18829309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 278 - 419
Target Start/End: Complemental strand, 26238531 - 26238390
Alignment:
Q  278 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 377  Q
    ||||||||||||||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| |||||||||| |    
T  26238531 gtaagcgtatactcacaaggcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaatg 26238432  T
Q  378 agagacaaattaattataaattgtttaagtaattcataatta 419  Q
    ||| |||||||||||||||||||||||   ||||||||||||    
T  26238431 agatacaaattaattataaattgtttataaaattcataatta 26238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 42442597 - 42442433
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||||||||||||||   ||||||||||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||||||  |||||||||    
T  42442597 aaaattgaaattttgttctgcgtaagcgtatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataagaacattcacaatg 42442498  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||  | ||||||||||||| | ||||||| ||||||||||||||| ||||||||| ||||    
T  42442497 aaattttataatttttaaacgagatataaattaactataaattgtttaagaaattcataaatatg 42442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 285 - 421
Target Start/End: Original strand, 44084185 - 44084321
Alignment:
Q  285 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 384  Q
    |||||||||  ||||||||| |||||||||| || || |||||  ||||| || |||| || |||||||||||| ||||| ||||||||||||||| |||    
T  44084185 tatactcacaagtcaaatttagttccctaattttgtaggcatgactagaaaatgataataaccttcacaatgaaattttgtagtttttaaacgagataca 44084284  T
Q  385 aattaattataaattgtttaagtaattcataattatg 421  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  44084285 aattaattataaattatttaagaaattcataattatg 44084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 225 - 382
Target Start/End: Complemental strand, 45121851 - 45121695
Alignment:
Q  225 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 324  Q
    |||||||||| |||||  ||| |||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||| || || |     
T  45121851 aatttattttgatttttcaaccaaaacgtg-aaaaattgaaattttgttccaagtaagcgtatactcacatgtcaaatttagttccctaattttgtacgt 45121753  T
Q  325 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagaga 382  Q
    |||  || ||||| ||||||| |||||||||||| ||||| ||||||||||| |||||    
T  45121752 atgactaaaacatgataagaaacttcacaatgaaattttgtagtttttaaacaagaga 45121695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 21556659 - 21556543
Alignment:
Q  305 cgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgttta 404  Q
    ||||| ||||| || || |||||||| |||||| ||||||| |||||| ||||| ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  21556659 cgttctctaattttgtaggcatggttggaacatcataagaaccttcaccatgaaattttggagtttttaaacgagatacaaattaattatgaattgttta 21556560  T
Q  405 agtaattcataattatg 421  Q
    || ||||||||||||||    
T  21556559 agaaattcataattatg 21556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 816613 - 816777
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||| |||||| || | |||||||||||||| || |||||||||| ||| |||||| || || |||||||  || ||| |||||||   ||||  ||    
T  816613 aaaattgcaattttatttcgagtaagcgtatacttacgggtcaaattttgtttcctaattttgtaggcatggtaggagcattataagaactatcactttg 816712  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| |||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||    
T  816713 aaattttggagtttttaaaggagagacaaattaattatgaattgtttaaaaaattcataattatg 816777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 258 - 421
Target Start/End: Original strand, 17373394 - 17373558
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggtt-agaacataataagaatcttcacaatg 356  Q
    |||||| ||||||||||| | ||||||||||||||| ||||||||||| ||| ||||| || || |||||||| | ||||| |||||||  ||||| |||    
T  17373394 aaattgcaattttgttccaaataagcgtatactcacgggtcaaatttcattctctaattttgtaggcatggttaaaaacatcataagaacattcaccatg 17373493  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| ||||| |||| | || || |||||||||  |||| |||| | ||||||||||||||    
T  17373494 aaattttggagtttctaaatgtgatacgaattaattacgaattttttaggaaattcataattatg 17373558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 228 - 421
Target Start/End: Original strand, 8058871 - 8059052
Alignment:
Q  228 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 327  Q
    ||||||| |||||  ||| |||| |||||||| || ||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||    
T  8058871 ttattttgatttttcaaccaaaacgtgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatg 8058969  T
Q  328 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
               ||||||| |||| ||||||| ||| | ||| ||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  8058970 -----------ataagaaccttcccaatgaaatttcgtagtctttaaacaagatgcaaattaattataaattgtttaagaaattcataattatg 8059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 279 - 423
Target Start/End: Complemental strand, 25391568 - 25391425
Alignment:
Q  279 taagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacga 378  Q
    ||||| |||||||| |||||||||||| ||| ||||| || || ||||||||||||||| ||||| |  ||||| || || ||||| |||||||||| ||    
T  25391568 taagcatatactca-tggtcaaatttcattcactaattttgtaggcatggttagaacatcataagtactttcaccataaaattttggagtttttaaagga 25391470  T
Q  379 gagacaaattaattataaattgtttaagtaattcataattatgga 423  Q
    || | || |||||||| ||||||||||  |||| |||||||||||    
T  25391469 gaaataagttaattatgaattgtttaaaaaatttataattatgga 25391425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 15441832 - 15441904
Alignment:
Q  349 tcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    |||| ||||| ||||| | |||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  15441832 tcaccatgaaattttggattttttaaatgagacacaaattaattatgaattgtttaagaaattcataattatg 15441904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 8322471 - 8322530
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 183  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | |||||||||||||||||    
T  8322471 ataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttgccta 8322530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 27360410 - 27360473
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 187  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  27360410 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 27360473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 267 - 421
Target Start/End: Complemental strand, 37226654 - 37226501
Alignment:
Q  267 ttttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgca 366  Q
    ||||||||  |||||||  |||||||  ||||||||||| ||||||||| |||  ||| |  ||| ||||||||||||| ||| || ||||| ||| | |    
T  37226654 ttttgttcggagtaagcaaatactcatgggtcaaatttctttccctaattttactagcttacttataacataataagaaactttaccatgaaatttagaa 37226555  T
Q  367 gtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    | |||||||| || ||| || ||| ||| ||||||||||  ||||||||||||||    
T  37226554 gattttaaacaagggacgaa-taaatatgaattgtttaataaattcataattatg 37226501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 30337717 - 30337777
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    ||||||||||| || |||| |||||| ||||||| ||||| | ||||||||||||||||||    
T  30337717 ataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcctaa 30337777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 368 - 422
Target Start/End: Original strand, 3843980 - 3844034
Alignment:
Q  368 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||||||  || |||||||||||| | |||||||||| ||||||||||||||||    
T  3843980 tttttaaattagggacaaattaattgtgaattgtttaaataattcataattatgg 3844034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 17846065 - 17846007
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||    
T  17846065 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 421
Target Start/End: Complemental strand, 8147832 - 8147799
Alignment:
Q  388 taattataaattgtttaagtaattcataattatg 421  Q
    ||||||||||||||||||| ||||||||||||||    
T  8147832 taattataaattgtttaagaaattcataattatg 8147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 30337481 - 30337424
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    |||||||||||||| ||||||||||| |||||||  |||| | || ||||||||||||    
T  30337481 ataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 2e-45; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 28997401 - 28997177
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  28997401 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 28997303  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  28997302 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 28997203  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  28997202 aattgtttaagaaattcataattatg 28997177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 196 - 419
Target Start/End: Original strand, 34948277 - 34948499
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  34948277 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 34948375  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  34948376 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 34948475  T
Q  396 aattgtttaagtaattcataatta 419  Q
    ||||||||||| ||||||||||||    
T  34948476 aattgtttaagaaattcataatta 34948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 399297 - 399066
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  399297 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 399199  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  399198 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 399099  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  399098 aattataaattgtttaagaaattcataattatg 399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 33228891 - 33229056
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||| ||||||  ||||||||| |||||||||| ||  | |||||  |||||||| ||||||| ||||||||||    
T  33228891 aaaattgaaattttgttccgcgtaagtgtacactcacaagtcaaatttagttccctaattttgcaggcatgactagaacatgataagaaccttcacaatg 33228990  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    || ||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  33228991 aaattttgtagtttttaaacgagatacaaattaattataaattagtttaagaaattcataattatg 33229056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 29743896 - 29743731
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||||||||||  |||||||||  ||||||||| || || ||||| || |||||| |||||||  |||||||||    
T  29743896 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttaattccctaattttgtaggcatgattggaacatgataagaacattcacaatg 29743797  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    || ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29743796 aaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 29743731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 193 - 427
Target Start/End: Complemental strand, 28931683 - 28931450
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    ||||||||||  ||||||||||| |||  ||| ||||||||| |||||  ||| |||| |||| ||| ||| |||||||||||  ||||||||||||| |    
T  28931683 tgcaaagtttcgtagcatttcaaagacatttcgatttattttaatttttgaaccaaaatgtgcgaaa-ttgcaattttgttccgtgtaagcgtatactta 28931585  T
Q  293 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
    | ||||||||||||||| ||||| || || ||||||||||||  | |||| ||||||||  ||| | ||||| ||||||||||| ||| | |||||||||    
T  28931584 cgggtcaaatttcgttctctaattttgtaggcatggttagaaggtcataacaatcttcaacatgcaattttgaagtttttaaacaagataaaaattaatt 28931485  T
Q  393 ataaattgtttaagtaattcataattatggaaaat 427  Q
    || |||| |||| | ||||||||||||||| ||||    
T  28931484 atgaattatttacgaaattcataattatgggaaat 28931450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21424461 - 21424549
Alignment:
Q  1 agatttgattttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaaat 92  Q
    ||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||| |||||||    
T  21424461 agatttgattttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattggagaagatgaacataacgttaaat 21424549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 13838472 - 13838245
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 293  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  13838472 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 13838374  T
Q  294 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
     || || ||||| |||||||||| || ||  ||||  | ||||   ||||||| |||||||||||| ||||| | ||||||||||| | |||||||||||    
T  13838373 gtgatcgaatttagttccctaattttgtagacatgactggaactagataagaaccttcacaatgaaattttgtaatttttaaacgatatacaaattaatt 13838274  T
Q  393 ataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||  ||||||||||||||    
T  13838273 ataaattgtttaataaattcataattatg 13838245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 193 - 422
Target Start/End: Complemental strand, 10231975 - 10231747
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  10231975 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 10231877  T
Q  293 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  10231876 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 10231777  T
Q  393 ataaattgtttaagtaattcataattatgg 422  Q
    || ||||||||||| |||||||||||||||    
T  10231776 attaattgtttaagaaattcataattatgg 10231747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 23217600 - 23217452
Alignment:
Q  195 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 294  Q
    |||||||| ||| |||||| | || | || |||||||||||||||| || ||||| | || ||||||||||||||||||||||||||  ||||||||       
T  23217600 caaagtttcatatcatttcgaagatgttttaatttatttttatttttaaccaaaacg-tg-aaaaattgaaattttgttcctagtaattgtatactctta 23217503  T
Q  295 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 345  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||    
T  23217502 ggtcaaatttcgttccttaattttgtaggcatggttagaacataataagaa 23217452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 21424643 - 21424700
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21424643 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 21424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 265 - 427
Target Start/End: Original strand, 31373247 - 31373409
Alignment:
Q  265 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 364  Q
    ||||||||| | |||| || |||||| || | |||||||  |||||||||| || || ||| ||||| ||||| ||||||| ||||||||  || |||||    
T  31373247 aattttgtttcgagtaggcatatactaacggatcaaattcagttccctaattttgtaggcaaggttaaaacatcataagaaccttcacaacaaaattttg 31373346  T
Q  365 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 427  Q
     |||||||||||||| ||  |||||||||| ||||||||||| ||||||||||| ||| ||||    
T  31373347 aagtttttaaacgagtgatgaattaattatgaattgtttaagaaattcataattttgggaaat 31373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 21419364 - 21419308
Alignment:
Q  128 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21419364 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcctaa 21419308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 18339592 - 18339541
Alignment:
Q  370 tttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  18339592 tttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 18339541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 268 - 422
Target Start/End: Complemental strand, 12098590 - 12098436
Alignment:
Q  268 tttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcag 367  Q
    |||||||| ||||||| ||||||||  | ||||||||| ||||||  | || ||  ||||||| |||||| | || || ||| || ||||| ||||  ||    
T  12098590 tttgttccgagtaagcatatactcaaggatcaaatttcattcccttgttttttagacatggtttgaacatcaaaaaaacctttaccatgaaattttaaag 12098491  T
Q  368 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    |||||||| | | |||||||||||||| |||| |||||| |||||||||||||||    
T  12098490 tttttaaatgcgggacaaattaattatgaattatttaagaaattcataattatgg 12098436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 268 - 422
Target Start/End: Original strand, 12849947 - 12850101
Alignment:
Q  268 tttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcag 367  Q
    |||||||| ||||||  |||| |||| | ||||||||  ||||||  | || || |||||||| |||||| | ||||| ||| || ||||| ||||  ||    
T  12849947 tttgttccgagtaagtatatattcacggatcaaattttattcccttcttttttaggcatggtttgaacatcaaaagaacctttaccatgaaattttagag 12850046  T
Q  368 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    |||||||| | | || ||||||||||| ||||||||||| |||||||||||||||    
T  12850047 tttttaaatgcgggataaattaattatgaattgtttaagaaattcataattatgg 12850101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 10026197 - 10026140
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  10026197 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 22814710 - 22814801
Alignment:
Q  328 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    |||||||||| ||||||| |  ||| ||||| ||||  |||||||||| || |||| |||||||||| ||||||||||| |||||| |||||    
T  22814710 gttagaacatcataagaaccgccaccatgaaattttcaagtttttaaatgatagacgaattaattatgaattgtttaagaaattcaaaatta 22814801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 4335187 - 4335248
Alignment:
Q  366 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 427  Q
    ||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||| | ||||||    
T  4335187 agtttttgaacgaggaacaaattaattatgaattgtttaagaaattcataattgttgaaaat 4335248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 10027124 - 10027184
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    ||||||||| |||| ||||||||||| ||||||| ||||| |||| ||||||| |||||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcctaa 10027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 422
Target Start/End: Complemental strand, 11797172 - 11796942
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||||||||||| ||||||||||||  | |  || |||||||||||||||  |||  ||| |||| ||| |||  |||| ||| | ||||||| |||||    
T  11797172 atttgcaaagtttgatagcatttcaaatatgtctcgatttatttttatttttcaaccgaaacgtgcgaaa-ttgttattt-gtttcgagtaagcatatac 11797075  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 389  Q
    |||| | ||||||| ||||||||  | || ||  ||||||| | |||| |||||||| | ||  ||||| ||||  |||||||||||  |  ||||||||    
T  11797074 tcacggatcaaattgcgttcccttgttttttagacatggtttggacatcataagaatttacatcatgaaattttagagtttttaaacacggaacaaatta 11796975  T
Q  390 attataaattgtttaagtaattcataattatgg 422  Q
    ||||| |||| |||||| |||| ||||| ||||    
T  11796974 attatgaattatttaagaaatttataatgatgg 11796942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 4335318 - 4335252
Alignment:
Q  333 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt 399  Q
    ||||| |||| || |||||| || || ||||| ||||||||||||||||| ||||||||||| ||||    
T  4335318 aacatcataataaacttcaccattaaattttgtagtttttaaacgagagataaattaattatcaatt 4335252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 33595608 - 33595670
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  33595608 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 33595670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 2e-45; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 15959441 - 15959665
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||||| |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||   ||||||||||||||| |    
T  15959441 aaagtttcatagcatttcaaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcataagcgtatactcacag 15959539  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||   |||||||||||||    
T  15959540 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagctgcaaattaattata 15959639  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||| ||||| ||||||||||||||    
T  15959640 aattgattaagaaattcataattatg 15959665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 31681038 - 31680814
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31681038 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31680940  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  31680939 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 31680840  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  31680839 aattgtttaagaaattcataattatg 31680814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 33430992 - 33430768
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  33430992 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 33430894  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  33430893 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 33430794  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  33430793 aattgtttaagaaattcataattatg 33430768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 258 - 422
Target Start/End: Complemental strand, 192517 - 192353
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||| ||||| |||||   ||||||| ||||||| ||| |||||||    
T  192517 aaattgaaattttgttccgagtaaacgtatactcataggtcaaatttagttccctaattttataggcatgacgagaacatgataagaaccttaacaatga 192418  T
Q  358 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    | ||||| |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  192417 aattttgtagtttttaaatgagatacaaattaattataaattgtttaagaaattcataattatgg 192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 257 - 416
Target Start/End: Complemental strand, 23034586 - 23034427
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||| |||| || || ||||| ||| |||||||||||||  ||||||||     
T  23034586 aaaattaaaattttgttcctagtaagcgtatactcacaggtcaaatttcattccttaattttgtaggcatgattataacataataagaactttcacaatt 23034487  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataa 416  Q
    || ||||  |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  23034486 aaattttatagttttaaaacgagagacaaattaattataaattgtttaagaaattcataa 23034427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 13818650 - 13818426
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||   ||| |||||||| ||||| |||||||||  ||||||||||||||||      
T  13818650 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaattgaaacgtgcaaaa-ttgaagttttgttccgcgtaagcgtatactcacaa 13818552  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  13818551 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 13818452  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    || |||||||| ||||||||||||||    
T  13818451 aactgtttaagaaattcataattatg 13818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 31501214 - 31501438
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31501214 aaagtttcatagcatttcgaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31501312  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| | |||||||||| || || ||| ||||||| ||| ||||||||||||||    
T  31501313 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccatcacaatgaaattatgtagtctttaaacaagatacaaattaattata 31501412  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  31501413 aattgtttaagaaattcataattatg 31501438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 190 - 419
Target Start/End: Original strand, 26282805 - 26283034
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26282805 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26282903  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26282904 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26283003  T
Q  389 aattataaattgtttaagtaattcataatta 419  Q
    |||||||||||||||||| ||||||||||||    
T  26283004 aattataaattgtttaagaaattcataatta 26283034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 39657022 - 39657249
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 293  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  39657022 aaagtttcatagcatttcgaagtcgtttaaatttattttgattttttaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 39657120  T
Q  294 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
     || |||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||||||||||    
T  39657121 gtgatcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaatt 39657220  T
Q  393 ataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||  ||||||||||||||    
T  39657221 ataaattgtttaataaattcataattatg 39657249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 31272018 - 31271854
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||||| ||| ||||||||||  |||||| || |||| ||||| |  ||  ||||| |||||||||||||||| ||||| |||     
T  31272018 aaaattgaaattttgttcctagcaagtgtatactcacaagtcaaaatttgttcactaatttggtagccatggctagaacataataagaaccttcagaata 31271919  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  31271918 aagtttttcagttttgaaacgagagacaaattaattataaatggtttaagaaattcataattatg 31271854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 36293108 - 36293339
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  36293108 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 36293206  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  36293207 tcacaagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 36293306  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    ||||||||||| |||||| ||||||||||||||    
T  36293307 aattataaattatttaagaaattcataattatg 36293339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 1775871 - 1776094
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  1775871 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactcaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 1775969  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    | |||||||  ||| ||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||| ||||||||||    
T  1775970 g-caaatttaattctctaattttttaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacagattaattata 1776068  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  1776069 aattgtttaagaaattcataattatg 1776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 16333395 - 16333619
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16333395 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16333493  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || ||||||||  || || || ||||||| |||| ||||||| ||||| | ||||||||| ||| ||||||||||||||    
T  16333494 gtcaaatttagttccctaattttgtaagcatgactaaaatatgataagaaccttcccaatgaaattttgtaatttttaaacaagatacaaattaattata 16333593  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    |||| |||||| ||||||||||||||    
T  16333594 aattttttaagaaattcataattatg 16333619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 277 - 421
Target Start/End: Complemental strand, 10034495 - 10034351
Alignment:
Q  277 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 376  Q
    |||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | |||||||||    
T  10034495 agtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaac 10034396  T
Q  377 gagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  10034395 gagatacaaattaattataaattgtttaagaaattcataattatg 10034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 257 - 421
Target Start/End: Original strand, 12278412 - 12278576
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||| ||||||||||||  ||||||| ||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12278412 aaaattaaaattttgttccgcgtaagcgaatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12278511  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 421  Q
    || ||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12278512 aaattttgtaatctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 12278576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 224 - 422
Target Start/End: Original strand, 38268944 - 38269130
Alignment:
Q  224 caatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataag 323  Q
    ||||||||||| |||||  ||| |||| |||||||| ||||||||||||||| |||||||||||||| || |||||||||| |||||||||| || || |    
T  38268944 caatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgagtaagcgtatacttacaggtcaaatttagttccctaattttgtagg 38269042  T
Q  324 catggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||           ||||||| |||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38269043 catg-----------ataagaaccttcacaatgaaattttgtagtttttatacgagatacaaattaattataaattgtttaagaaattcataattatgg 38269130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 257 - 419
Target Start/End: Complemental strand, 37255216 - 37255054
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||  | ||    
T  37255216 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttccgagtg 37255117  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 419  Q
    || ||||| ||| ||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  37255116 aaattttgtagtctttaaacgagatacaaattaattataaattatttaagaaattcataatta 37255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 196 - 421
Target Start/End: Original strand, 17332115 - 17332339
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||  | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||| ||||||| |      
T  17332115 aaagtttcatagcattttgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcgcaa 17332213  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||| ||| ||||||||||||||    
T  17332214 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacaagatacaaattaattata 17332313  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||| ||||| ||||||||||||||    
T  17332314 aattgcttaagaaattcataattatg 17332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 190 - 421
Target Start/End: Complemental strand, 39435376 - 39435145
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  |||  ||||||| |||||||||||||||  |||||| |||||    
T  39435376 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacatgcaaaa-ttgaaattttgttccgcgtaagcttatac 39435278  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
     |||  ||||||||| |||||||||| || || | |||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39435277 ccacaagtcaaatttagttccctaattttgtaggtatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 39435178  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  39435177 aattataaattgtttaagaaattcataattatg 39435145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 257 - 421
Target Start/End: Complemental strand, 36291982 - 36291818
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| |||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||     
T  36291982 aaaattgaaattttgttccgcgtaagtgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaata 36291883  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 421  Q
    || ||||  ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  36291882 aaattttatagtttttaaacgagatacaaattaattataagttagtttaag-aattcataattatg 36291818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 257 - 396
Target Start/End: Complemental strand, 43069468 - 43069329
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| ||  |  ||||  |||||||| ||||||| ||||| ||||    
T  43069468 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgcagacatgactagaacatgataagaaccttcaaaatg 43069369  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataa 396  Q
    || ||||| ||||||||||||||| |||||||||||||||    
T  43069368 aaattttgtagtttttaaacgagatacaaattaattataa 43069329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 182 - 421
Target Start/End: Complemental strand, 16155683 - 16155446
Alignment:
Q  182 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt-cctagta 280  Q
    ||||||| || || ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| ||||| |||| || ||  ||     
T  16155683 taaaaacgatctgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaatttttttttccgtgtg 16155585  T
Q  281 agcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgaga 380  Q
    |||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| |  ||||  | |||||||||||||    
T  16155584 agcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataatattttataatttttaaacgaga 16155485  T
Q  381 gacaaattaattataaattgtttaagtaattcataattatg 421  Q
      |||||||||||||||||| ||||| ||||||||||||||    
T  16155484 --caaattaattataaattggttaagaaattcataattatg 16155446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 353 - 422
Target Start/End: Original strand, 30297604 - 30297673
Alignment:
Q  353 aatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30297604 aatgaattttttcagtttttaaacgagagacaaattaattataaattgtttaagaaattcataattatgg 30297673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 257 - 422
Target Start/End: Complemental strand, 27750846 - 27750683
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 356  Q
    ||||||| |||||| |||| ||||||| ||||||||  ||||||||||  |||||||||  | ||  |||||||||||||| |||| ||  ||||| | |    
T  27750846 aaaattgcaattttcttccgagtaagcatatactcatgggtcaaatttaattccctaattgtgtagccatggttagaacatcataaaaacattcaccaag 27750747  T
Q  357 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    || ||||| |||||||||||||| |||||||||| ||| ||||| ||||| |||||||||||||||    
T  27750746 aaattttgtagtttttaaacgagcgacaaattaa-tattaattg-ttaagaaattcataattatgg 27750683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 300 - 422
Target Start/End: Original strand, 11779160 - 11779282
Alignment:
Q  300 aatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt 399  Q
    |||||||||| | ||| ||||| ||||||||| ||||| |||| |  |||||  || || ||||| |||||||||||||| |||||||||||||| ||||    
T  11779160 aatttcgttcgccaattttataggcatggttaaaacatcataaaagccttcatcataaacttttggagtttttaaacgagcgacaaattaattatgaatt 11779259  T
Q  400 gtttaagtaattcataattatgg 422  Q
    ||||||  |||||||||||||||    
T  11779260 gtttaaaaaattcataattatgg 11779282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 193 - 391
Target Start/End: Complemental strand, 24793096 - 24792894
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  24793096 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 24792998  T
Q  293 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 387  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  24792997 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 24792898  T
Q  388 taat 391  Q
    ||||    
T  24792897 taat 24792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 257 - 406
Target Start/End: Original strand, 18266162 - 18266315
Alignment:
Q  257 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggt----tagaacataataagaatcttcac 352  Q
    ||||||| ||||||| ||  ||||||| |||| |||| |||||||||||  |||| ||| || || |||||||    ||||| || ||||||| ||||||    
T  18266162 aaaattgcaattttgctctgagtaagcatatagtcacaggtcaaatttcactcccaaattttgtaggcatggtcgattagaatatcataagaaccttcac 18266261  T
Q  353 aatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaag 406  Q
     ||| | ||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  18266262 catggaattttgaagtttttaaatgagagacaaactaattatgaattgtttaag 18266315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 28801791 - 28801712
Alignment:
Q  278 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    ||||||||||||||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||||| |||||||||||    
T  28801791 gtaagcgtatactcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaccttcacaatga 28801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 422
Target Start/End: Complemental strand, 8788452 - 8788264
Alignment:
Q  233 tttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttag 332  Q
    |||||||| |||| |||| |||||||| | | ||||||||| | ||||||||||| ||||   |||||||| | ||| | ||| || || ||||||||||    
T  8788452 tttatttttaaaccaaaatgtgcaaaa-tggcaattttgtttcgagtaagcgtattctcataagtcaaattccattctccaattttgtaggcatggttag 8788354  T
Q  333 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||| ||||||| |||||| || || ||||  |||| |||||| ||| ||  |||||||   |||| |||||| |||||||||||||||    
T  8788353 aacatcataagaaacttcaccattaaattttcgagttcttaaacaagatacggattaattcctaattatttaagaaattcataattatgg 8788264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 412
Target Start/End: Complemental strand, 23034351 - 23034262
Alignment:
Q  323 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattc 412  Q
    ||||||||  || |||||||||| ||||| ||| || ||||  ||||||||||  ||||||||||||||||||||||||||||| |||||    
T  23034351 gcatggttgtaatataataagaaccttcaaaattaaattttatagtttttaaataagagacaaattaattataaattgtttaagaaattc 23034262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 35911354 - 35911451
Alignment:
Q  325 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||||||||||| |||| || |||||| ||||| ||||  | |||| ||||||||||  |||||| ||| ||||||||||| |||||||||||||||    
T  35911354 atggttagaacatcataaaaaccttcaccatgaaattttatatttttcaaacgagagatgaattaactatgaattgtttaagaaattcataattatgg 35911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 35338408 - 35338308
Alignment:
Q  327 ggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaa 426  Q
    ||||||||||| |||||||  ||||| || || |||||  ||||||||| |||| || |||||||||| |||| |||||  |||||||||||||||||||    
T  35338408 ggttagaacatcataagaacgttcaccataaaattttggggtttttaaatgagatacgaattaattatgaattttttaaaaaattcataattatggaaaa 35338309  T
Q  427 t 427  Q
    |    
T  35338308 t 35338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 339 - 422
Target Start/End: Complemental strand, 20368573 - 20368490
Alignment:
Q  339 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||| |  ||| |||||||||||||||    
T  20368573 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattatgaattatccaagaaattcataattatgg 20368490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 340
Target Start/End: Original strand, 30297492 - 30297606
Alignment:
Q  222 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 321  Q
    |||||||||||||| ||||  ||| |||| |||||||| ||||||||||||| ||| ||||||   ||||||  |||||||||  ||||||||| || ||    
T  30297492 ttcaatttatttttgttttccaactaaaacgtgcaaaa-ttgaaattttgtttctattaagcg---actcacatgtcaaattttattccctaattttgta 30297587  T
Q  322 agcatggttagaacataat 340  Q
     ||||||| ||||||||||    
T  30297588 ggcatggtcagaacataat 30297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 33094407 - 33094355
Alignment:
Q  366 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 418  Q
    ||||||||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  33094407 agtttttaaacgagagaaaaattaattatgaattgtttaataaattcataatt 33094355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 35362206 - 35362274
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 192  Q
    ||||||||||||| |||||||||||| ||||||| ||||| | || ||||||||||||| |||| ||||    
T  35362206 ataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaagaatt 35362274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 339 - 422
Target Start/End: Complemental strand, 20363211 - 20363128
Alignment:
Q  339 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 422  Q
    |||||||  ||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||| |  ||| |||||||||||||||    
T  20363211 ataagaacattcacaatgaaattttggagtttttaaacgataaacaaatttattatgaattatccaagaaattcataattatgg 20363128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 420
Target Start/End: Original strand, 30922486 - 30922648
Alignment:
Q  258 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 357  Q
    |||||| ||||||||||  | ||||||||||||||| ||||| ||| | ||   |||| || |||||||||||  ||||| |||| || |||||| || |    
T  30922486 aaattgcaattttgttctgactaagcgtatactcacgggtcatattccattttttaattttgtaagcatggtttaaacattataaaaaccttcaccatca 30922585  T
Q  358 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 420  Q
    | ||||  | ||||||||||||| |   ||||| ||| ||||||||||  |||||||||||||    
T  30922586 aattttagaatttttaaacgagatatgcattaactatgaattgtttaaaaaattcataattat 30922648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 27843080 - 27843023
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  27843080 ataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 295 - 416
Target Start/End: Complemental strand, 1050650 - 1050533
Alignment:
Q  295 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 394  Q
    ||||||||||||||||||||| || |||| || ||||||||   |||||||  ||||| || || ||||  ||||||||||||||    | ||||||| |    
T  1050650 ggtcaaatttcgttccctaattttgtaagaatagttagaactacataagaacattcaccataaaattttagagtttttaaacgag----acattaatttt 1050555  T
Q  395 aaattgtttaagtaattcataa 416  Q
     ||||||||||| |||||||||    
T  1050554 gaattgtttaagaaattcataa 1050533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 15179078 - 15179137
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 183  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  15179078 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 15179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 22761228 - 22761177
Alignment:
Q  367 gtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 418  Q
    |||||| || |||||||||||||||| | ||||||||||| |||||||||||    
T  22761228 gtttttgaaagagagacaaattaattctgaattgtttaagaaattcataatt 22761177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 32994443 - 32994502
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 183  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  32994443 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 32994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    |||||||| ||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 35363278 - 35363340
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 186  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35363278 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 19558161 - 19558218
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  19558161 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 421
Target Start/End: Complemental strand, 53578 - 53354
Alignment:
Q  196 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 295  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  53578 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 53480  T
Q  296 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 395  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  53479 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 53380  T
Q  396 aattgtttaagtaattcataattatg 421  Q
    ||||||||||| ||||||||||||||    
T  53379 aattgtttaagaaattcataattatg 53354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 421
Target Start/End: Original strand, 479944 - 480175
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  479944 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 480042  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  480043 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 480142  T
Q  389 aattataaattgtttaagtaattcataattatg 421  Q
    |||||||||||||||||| ||||||||||||||    
T  480143 aattataaattgtttaagaaattcataattatg 480175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 330254 - 330194
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  330254 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 330194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 195 - 422
Target Start/End: Complemental strand, 17978 - 17754
Alignment:
Q  195 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 294  Q
    |||||||| ||| |||||| | |||| | |||||| ||||||||||  ||| ||| | ||||||| |||||||||||||||||||||  ||||||| |      
T  17978 caaagtttcatatcatttcgaagacgttgcaatttgtttttatttttcaaccaaacg-tgcaaaa-ttgaaattttgttcctagtaattgtatactaata 17881  T
Q  295 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 394  Q
    | |||||| ||||||| |||| || || ||||||||||||||||||| ||| |||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  17880 gatcaaatgtcgttccttaattttgtaggcatggttagaacataatatgaaccttcacaatgaaattttgctgtttttaaa-gagagacaaattacttat 17782  T
Q  395 aaattgtttaagtaattcataattatgg 422  Q
    |||||||| ||| |||||||| ||||||    
T  17781 aaattgttaaagaaattcatacttatgg 17754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 190 - 416
Target Start/End: Complemental strand, 18238 - 18012
Alignment:
Q  190 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 289  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  18238 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 18140  T
Q  290 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 388  Q
    ||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||| || |||||||||||| ||||| |  |||||||||| | |||||||    
T  18139 tcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgatatacaaatt 18040  T
Q  389 aattataaattgtttaagtaattcataa 416  Q
    ||||||||||||||||||  ||||||||    
T  18039 aattataaattgtttaagacattcataa 18012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 193 - 422
Target Start/End: Complemental strand, 8695 - 8467
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  8695 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 8597  T
Q  293 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 392  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  8596 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 8497  T
Q  393 ataaattgtttaagtaattcataattatgg 422  Q
    || ||||||||||| |||||||||||||||    
T  8496 attaattgtttaagaaattcataattatgg 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 193 - 391
Target Start/End: Complemental strand, 35479 - 35277
Alignment:
Q  193 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 292  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  35479 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 35381  T
Q  293 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 387  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  35380 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 35281  T
Q  388 taat 391  Q
    ||||    
T  35280 taat 35277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 3521 - 3383
Alignment:
Q  223 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 322  Q
    ||||||| ||||||||||  |||||||| |||||||| ||| ||||||||||| | ||| | ||||||||| | |||||| | |||||| ||| || ||     
T  3521 tcaatttgtttttatttttcaacaaaaatgtgcaaaa-ttgcaattttgttccgactaaccatatactcacggatcaaatgttgttccccaattttgtag 3423  T
Q  323 gcatggttagaacataataagaatcttcacaatgaagtttt 363  Q
    |||||||||||| ||  ||||||| ||||| ||||| ||||    
T  3422 gcatggttagaatat-gtaagaattttcaccatgaattttt 3383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 12885 - 12945
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    |||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||||    
T  12885 ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcctaa 12945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 136973 - 136913
Alignment:
Q  124 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 184  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  136973 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 136913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 12001 - 11940
Alignment:
Q  120 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 181  Q
    ||||| |||| ||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  12001 aaaaaaaaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  125 taaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 182  Q
    ||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 120 times since January 2019
Visitors: 3248