View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0447-Insertion-26 (Length: 105)

Name: NF0447-Insertion-26
Description: NF0447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0447-Insertion-26
NF0447-Insertion-26
[»] chr7 (2 HSPs)
chr7 (7-95)||(31152514-31152602)
chr7 (7-95)||(31171076-31171164)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 2e-43; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 31152514 - 31152602
Alignment:
Q  7 acattgattataaacttgcgtatatgatagttgaagttgaaaaatgaaattaaaattttattttatccttgtaagttatagttggcttg 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31152514 acattgattataaacttgcgtatatgatagttgaagttgaaaaatgaaattaaaattttattttatccttgtaagttatagttggcttg 31152602  T

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Target: chr7; HSP #2
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 31171076 - 31171164
Alignment:
Q  7 acattgattataaacttgcgtatatgatagttgaagttgaaaaatgaaattaaaattttattttatccttgtaagttatagttggcttg 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31171076 acattgattataaacttgcgtatatgatagttgaagttgaaaaatgaaattaaaattttattttatccttgtaagttatagttggcttg 31171164  T

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