View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0447_low_11 (Length: 331)
Name: NF0447_low_11
Description: NF0447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0447_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 19751376 - 19751627
Alignment:
| Q |
1 |
tggttagattactcactttatgtacgatacactatagtaatagtgtagcttaatgctcaagttaactaataccgagttacagttttgcaggtttaacacc |
100 |
Q |
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||||||||||||||||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
19751376 |
tggttagattactcactctatgtaccatacactatagtaatagtgtagctaaa-gctcaagttaactaataccgagttacagttttgcaggtttaacaac |
19751474 |
T |
|
| Q |
101 |
aatcaccacaaaattcaaagtaattcctcaacctcccacaaaacagaacctgaaaccatatccctcgttgacaaacatggtgagaattcactgctataca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
19751475 |
aatcaccacaaaattcaaagtaattcctcaacctcctacaaaacagaacctgaaaccatatccctcgttgacaaacatggtgagaattcactgctatgca |
19751574 |
T |
|
| Q |
201 |
tgaaaaaatatcccaaccaacattaaataatttggttaatgtccgagaataat |
253 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
19751575 |
tgaaaaaatatcccaaccaacactaaataatttggttaatgtccgagaataat |
19751627 |
T |
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