View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0447_low_24 (Length: 277)
Name: NF0447_low_24
Description: NF0447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0447_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 48 - 239
Target Start/End: Complemental strand, 32781123 - 32780932
Alignment:
| Q |
48 |
catcatcaccgaaattcctggagctggttgacgacaatggagaagccgtattcgtttctgttccaaggtagtctgcccatctagatggaccatcccattc |
147 |
Q |
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| T |
32781123 |
catcatgaccgaaattcctggagctggttgacgacaatggagaagccgtatttgtttctgttccaaggtagtctgcccatctagatggaccatcccattc |
32781024 |
T |
|
| Q |
148 |
ccttgatcttgccgcagtcggcgataatgaagaatcctggttcgatgatttttgcctcgacttcgccataaactaataataatccgtctctg |
239 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32781023 |
ccttgatcttgccgcagtcggcgataatgaagaatcctggttcgatgatttttgcctcgacttcgccataaactaataataatccgtctctg |
32780932 |
T |
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