View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0447_low_25 (Length: 269)
Name: NF0447_low_25
Description: NF0447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0447_low_25 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 38 - 269
Target Start/End: Original strand, 48656133 - 48656364
Alignment:
| Q |
38 |
gtgaaattacaacaatgtccctagtgccacatgagggtgtataataggagtatgaaaagaagtgtgttcatgaaaaattgttcaattttaaattaagttt |
137 |
Q |
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| T |
48656133 |
gtgaaattacaacaatgtccctagtgccacatgagggtgtataataggagtatgaaaagaagtgtgttcataaaaaattgttcaattttaaattaagttt |
48656232 |
T |
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| Q |
138 |
aaagacctcttgtgcggatttgccaaaaccaaaacaaatataagagacacatttaagcatcaacaagtgttaacatgtgtctaagagagtgcatgttaaa |
237 |
Q |
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| T |
48656233 |
aaagacctcttgtgcggatttgccaaaaccaaaacaaatataaaagacacatttaagcatcaacaagtgttaacatgtgtctaagagagtgcatgttaaa |
48656332 |
T |
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| Q |
238 |
gaactcgatataaaaatatttgtcttaaaatt |
269 |
Q |
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|||||| ||||||||||||||||||||||||| |
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| T |
48656333 |
gaactcaatataaaaatatttgtcttaaaatt |
48656364 |
T |
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