View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0448_high_8 (Length: 294)
Name: NF0448_high_8
Description: NF0448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0448_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 12328748 - 12329011
Alignment:
| Q |
1 |
ttgattttcataatttcaccctttagggctttaaaagaacaaaaagaaattttcatgatgctcattaggtggtagacagggaaattttgtaaaccaaaga |
100 |
Q |
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| T |
12328748 |
ttgattttcataatttcaccctttagggctttaaaagaacaaaaagaaattttcatgatgctcattaggtggtagacagggaaattttgtaaaccaaaga |
12328847 |
T |
|
| Q |
101 |
aaataaaactgcttttaagaaaaggatgttgtatcttaaaagcacttttccaaaaattttaatctatccaaagctcttcacttaatttgcagtatatcta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
12328848 |
aaataaaactgcttttaagaaaaggatgttgtatcttaaaagcacttttccaaaaatttcaatctatccaaagctcttcacttaatttgcagtatatcta |
12328947 |
T |
|
| Q |
201 |
tgctttggctctcagggaaatcacgtgtgctacatatccttctgcaaaagaaatgaatttataa |
264 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12328948 |
tgctttggctctcagggaaatcacgtgtgctacatatccttctgcaaaagaaatgaatttataa |
12329011 |
T |
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