View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0449_high_8 (Length: 259)

Name: NF0449_high_8
Description: NF0449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0449_high_8
NF0449_high_8
[»] chr6 (59 HSPs)
chr6 (1-239)||(20907787-20908024)
chr6 (1-231)||(27567415-27567644)
chr6 (1-231)||(19790585-19790814)
chr6 (1-229)||(22408111-22408336)
chr6 (1-229)||(18180577-18180803)
chr6 (1-193)||(23657226-23657416)
chr6 (1-219)||(17804280-17804497)
chr6 (1-229)||(18907195-18907422)
chr6 (1-213)||(27553413-27553606)
chr6 (1-196)||(22863053-22863246)
chr6 (1-212)||(14472361-14472570)
chr6 (125-221)||(1644453-1644550)
chr6 (89-231)||(21834783-21834922)
chr6 (125-221)||(23414725-23414822)
chr6 (125-221)||(27556483-27556580)
chr6 (125-221)||(31478074-31478171)
chr6 (12-219)||(25766985-25767191)
chr6 (1-110)||(27415748-27415857)
chr6 (1-101)||(12496508-12496608)
chr6 (1-212)||(22429836-22430045)
chr6 (1-210)||(16741298-16741506)
chr6 (125-221)||(27416122-27416219)
chr6 (1-109)||(18955569-18955677)
chr6 (1-110)||(12706880-12706988)
chr6 (1-93)||(1587537-1587629)
chr6 (148-219)||(16523336-16523407)
chr6 (5-79)||(2685129-2685203)
chr6 (1-79)||(5616620-5616698)
chr6 (169-231)||(21766777-21766839)
chr6 (1-74)||(19662995-19663068)
chr6 (1-86)||(9482099-9482184)
chr6 (141-193)||(14472044-14472096)
chr6 (151-221)||(16624211-16624278)
chr6 (151-221)||(16760374-16760441)
chr6 (141-193)||(18956044-18956096)
chr6 (3-83)||(22059550-22059630)
chr6 (1-101)||(22592610-22592710)
chr6 (151-221)||(31477770-31477837)
chr6 (151-206)||(22949199-22949254)
chr6 (151-206)||(22953155-22953210)
chr6 (151-206)||(23871643-23871698)
chr6 (151-206)||(23875599-23875654)
chr6 (142-212)||(1644796-1644866)
chr6 (142-212)||(8243952-8244022)
chr6 (142-212)||(11566953-11567023)
chr6 (142-212)||(19870681-19870751)
chr6 (142-212)||(23395159-23395229)
chr6 (142-212)||(23990011-23990081)
chr6 (150-219)||(12618798-12618867)
chr6 (125-193)||(16760068-16760137)
chr6 (141-193)||(22948881-22948933)
chr6 (141-193)||(22952837-22952889)
chr6 (141-193)||(23871325-23871377)
chr6 (141-193)||(23875281-23875333)
chr6 (1-80)||(1644927-1645005)
chr6 (77-181)||(15894310-15894413)
chr6 (142-212)||(18917211-18917281)
chr6 (74-115)||(16523281-16523322)
chr6 (1-93)||(20803359-20803451)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-239)||(422337-422574)
scaffold0001 (1-221)||(173371-173590)
[»] chr1 (40 HSPs)
chr1 (1-231)||(3704870-3705099)
chr1 (1-231)||(45489549-45489778)
chr1 (1-229)||(17678393-17678619)
chr1 (1-227)||(45310172-45310399)
chr1 (1-212)||(18393769-18393979)
chr1 (5-219)||(8761442-8761655)
chr1 (1-231)||(22449071-22449300)
chr1 (1-212)||(16080250-16080459)
chr1 (1-212)||(36819114-36819323)
chr1 (125-221)||(20229073-20229170)
chr1 (1-212)||(24782906-24783115)
chr1 (1-196)||(1010830-1011023)
chr1 (155-236)||(33049984-33050065)
chr1 (125-221)||(33797362-33797459)
chr1 (1-110)||(33797724-33797833)
chr1 (1-221)||(19211947-19212167)
chr1 (74-229)||(3472804-3472957)
chr1 (1-98)||(33049893-33049989)
chr1 (141-229)||(18182065-18182153)
chr1 (1-101)||(46975667-46975767)
chr1 (1-74)||(12647096-12647169)
chr1 (1-110)||(18882558-18882667)
chr1 (1-186)||(21022768-21022952)
chr1 (1-110)||(23819105-23819214)
chr1 (1-101)||(20138283-20138383)
chr1 (125-193)||(1925393-1925462)
chr1 (125-193)||(20924407-20924476)
chr1 (1-181)||(22831183-22831361)
chr1 (151-221)||(1925089-1925156)
chr1 (151-221)||(20924103-20924170)
chr1 (151-206)||(39244101-39244156)
chr1 (151-206)||(39247656-39247711)
chr1 (151-206)||(41388201-41388256)
chr1 (1-181)||(6151990-6152169)
chr1 (142-212)||(16375403-16375473)
chr1 (142-212)||(20228754-20228824)
chr1 (142-212)||(21407446-21407516)
chr1 (142-212)||(52639632-52639702)
chr1 (77-185)||(42865092-42865200)
chr1 (1-49)||(21305566-21305614)
[»] chr4 (50 HSPs)
chr4 (1-239)||(15353112-15353350)
chr4 (1-239)||(16351654-16351891)
chr4 (1-231)||(11250367-11250596)
chr4 (1-231)||(25555587-25555816)
chr4 (74-231)||(16356831-16356986)
chr4 (16-219)||(5338801-5339003)
chr4 (1-212)||(17810363-17810572)
chr4 (74-231)||(16348543-16348698)
chr4 (1-211)||(36133768-36133976)
chr4 (1-196)||(14757228-14757421)
chr4 (125-221)||(43256341-43256438)
chr4 (74-229)||(16487956-16488110)
chr4 (148-219)||(20157411-20157482)
chr4 (1-110)||(1951567-1951676)
chr4 (148-229)||(13812970-13813051)
chr4 (1-101)||(9530633-9530733)
chr4 (1-109)||(43255967-43256075)
chr4 (1-79)||(23139492-23139570)
chr4 (1-110)||(17152293-17152402)
chr4 (1-101)||(19757407-19757507)
chr4 (1-101)||(19782299-19782399)
chr4 (3-79)||(26243473-26243549)
chr4 (1-79)||(18237114-18237192)
chr4 (1-101)||(3412996-3413096)
chr4 (1-101)||(18222184-18222284)
chr4 (148-221)||(15224960-15225033)
chr4 (1-101)||(16243206-16243306)
chr4 (41-101)||(18228699-18228759)
chr4 (148-212)||(22634373-22634437)
chr4 (1-95)||(45938353-45938447)
chr4 (125-193)||(10712629-10712698)
chr4 (125-193)||(10926399-10926468)
chr4 (1-101)||(2014978-2015078)
chr4 (151-221)||(10712932-10712999)
chr4 (151-221)||(10926702-10926769)
chr4 (1-109)||(27534218-27534325)
chr4 (151-206)||(12487802-12487857)
chr4 (151-206)||(14954127-14954182)
chr4 (151-206)||(25689961-25690016)
chr4 (142-212)||(5756883-5756953)
chr4 (77-181)||(12570156-12570259)
chr4 (125-193)||(12487484-12487553)
chr4 (150-219)||(33742461-33742530)
chr4 (141-193)||(14954448-14954500)
chr4 (141-193)||(25689643-25689695)
chr4 (141-193)||(27533799-27533851)
chr4 (142-196)||(4561279-4561333)
chr4 (142-212)||(9556621-9556691)
chr4 (2-80)||(28569251-28569328)
chr4 (173-221)||(17152464-17152512)
[»] scaffold0003 (4 HSPs)
scaffold0003 (1-231)||(413856-414085)
scaffold0003 (125-221)||(71142-71239)
scaffold0003 (1-110)||(71504-71613)
scaffold0003 (1-79)||(139932-140010)
[»] chr7 (58 HSPs)
chr7 (1-239)||(9445964-9446201)
chr7 (1-231)||(20569402-20569631)
chr7 (1-229)||(2760215-2760442)
chr7 (1-219)||(3271918-3272134)
chr7 (2-219)||(11312731-11312947)
chr7 (1-212)||(12318218-12318427)
chr7 (5-212)||(15605082-15605287)
chr7 (1-229)||(12321547-12321774)
chr7 (74-219)||(14429976-14430120)
chr7 (1-110)||(48593262-48593371)
chr7 (1-110)||(13461952-13462061)
chr7 (5-110)||(42205305-42205410)
chr7 (1-196)||(33214-33407)
chr7 (1-212)||(16583347-16583555)
chr7 (1-193)||(70571-70761)
chr7 (1-193)||(74680-74870)
chr7 (1-110)||(9593536-9593645)
chr7 (1-110)||(9644499-9644608)
chr7 (125-218)||(25927431-25927525)
chr7 (1-110)||(18864-18973)
chr7 (125-221)||(13918708-13918805)
chr7 (125-221)||(1859014-1859111)
chr7 (1-212)||(13635275-13635484)
chr7 (148-219)||(2832393-2832464)
chr7 (1-115)||(17137868-17137982)
chr7 (148-229)||(9751707-9751788)
chr7 (148-229)||(39267851-39267932)
chr7 (1-196)||(15580798-15580991)
chr7 (1-101)||(16438840-16438940)
chr7 (162-221)||(7519324-7519383)
chr7 (1-110)||(16724437-16724546)
chr7 (1-110)||(17701451-17701560)
chr7 (1-101)||(13149354-13149454)
chr7 (1-93)||(15728532-15728624)
chr7 (157-231)||(42204076-42204151)
chr7 (1-101)||(8917626-8917726)
chr7 (1-93)||(14217122-14217214)
chr7 (1-74)||(6801438-6801512)
chr7 (142-212)||(12704604-12704674)
chr7 (142-212)||(39722357-39722427)
chr7 (125-193)||(39722039-39722108)
chr7 (151-221)||(45169966-45170033)
chr7 (1-95)||(11987418-11987512)
chr7 (142-212)||(12714955-12715025)
chr7 (142-212)||(12718759-12718829)
chr7 (142-212)||(12723670-12723740)
chr7 (142-212)||(16114332-16114402)
chr7 (142-212)||(16117485-16117555)
chr7 (142-212)||(16907146-16907216)
chr7 (142-212)||(18279494-18279564)
chr7 (142-212)||(18283457-18283527)
chr7 (157-221)||(18425517-18425578)
chr7 (141-177)||(2530335-2530371)
chr7 (141-193)||(45170287-45170339)
chr7 (1-80)||(12704464-12704543)
chr7 (1-80)||(26292617-26292695)
chr7 (1-80)||(39722488-39722566)
chr7 (125-186)||(15083976-15084038)
[»] scaffold0550 (1 HSPs)
scaffold0550 (26-239)||(7545-7757)
[»] chr2 (39 HSPs)
chr2 (1-239)||(24174874-24175111)
chr2 (1-239)||(24655144-24655381)
chr2 (1-229)||(25961340-25961567)
chr2 (2-229)||(24869964-24870190)
chr2 (1-229)||(24716336-24716562)
chr2 (1-229)||(40428547-40428776)
chr2 (74-231)||(25963595-25963750)
chr2 (1-220)||(19688562-19688780)
chr2 (1-219)||(21327372-21327589)
chr2 (1-219)||(21318441-21318658)
chr2 (1-219)||(24735486-24735703)
chr2 (67-219)||(22811782-22811934)
chr2 (1-212)||(10101451-10101660)
chr2 (125-221)||(31344957-31345054)
chr2 (2-79)||(18855268-18855345)
chr2 (1-74)||(22460996-22461069)
chr2 (164-229)||(37524759-37524824)
chr2 (1-93)||(61023-61115)
chr2 (1-101)||(23187275-23187375)
chr2 (1-101)||(23598538-23598638)
chr2 (1-93)||(27263481-27263573)
chr2 (1-101)||(19928308-19928408)
chr2 (169-229)||(21916071-21916131)
chr2 (125-193)||(30345255-30345324)
chr2 (142-221)||(41530955-41531031)
chr2 (151-221)||(1283468-1283535)
chr2 (151-221)||(30344951-30345018)
chr2 (3-83)||(44370106-44370186)
chr2 (74-167)||(21918194-21918286)
chr2 (142-212)||(27601887-27601957)
chr2 (125-193)||(1283162-1283231)
chr2 (142-196)||(12901457-12901511)
chr2 (142-212)||(24628424-24628494)
chr2 (142-196)||(24649464-24649518)
chr2 (142-212)||(27379378-27379448)
chr2 (142-212)||(27383424-27383494)
chr2 (125-193)||(41531268-41531337)
chr2 (142-195)||(15477711-15477764)
chr2 (2-115)||(45677961-45678074)
[»] chr3 (71 HSPs)
chr3 (1-239)||(11557190-11557427)
chr3 (1-231)||(11594945-11595174)
chr3 (1-229)||(1982616-1982843)
chr3 (1-231)||(3389741-3389971)
chr3 (1-231)||(42326023-42326244)
chr3 (1-231)||(3402761-3402991)
chr3 (1-112)||(26190814-26190925)
chr3 (1-219)||(20461306-20461523)
chr3 (1-219)||(326970-327187)
chr3 (74-231)||(11298407-11298562)
chr3 (74-219)||(12496352-12496495)
chr3 (1-219)||(7793152-7793372)
chr3 (1-231)||(12037758-12037987)
chr3 (74-219)||(18383795-18383939)
chr3 (9-225)||(11854813-11855028)
chr3 (1-110)||(31097360-31097469)
chr3 (125-221)||(4589037-4589134)
chr3 (125-221)||(5223144-5223241)
chr3 (125-221)||(12339546-12339643)
chr3 (1-212)||(11300317-11300526)
chr3 (1-212)||(15482754-15482962)
chr3 (1-196)||(30066056-30066249)
chr3 (74-219)||(322685-322829)
chr3 (1-196)||(11070178-11070371)
chr3 (125-221)||(11300694-11300791)
chr3 (1-196)||(14499435-14499628)
chr3 (125-221)||(15464945-15465042)
chr3 (125-221)||(19775513-19775610)
chr3 (1-212)||(2897629-2897838)
chr3 (55-229)||(11862877-11863050)
chr3 (74-228)||(19725790-19725943)
chr3 (1-196)||(55022977-55023170)
chr3 (89-229)||(11851665-11851804)
chr3 (1-196)||(11165335-11165528)
chr3 (1-101)||(38814584-38814684)
chr3 (148-219)||(14665495-14665566)
chr3 (1-115)||(856335-856449)
chr3 (1-79)||(17242194-17242272)
chr3 (148-219)||(14668651-14668722)
chr3 (1-102)||(3833873-3833974)
chr3 (1-221)||(15849891-15850109)
chr3 (1-86)||(16864939-16865024)
chr3 (1-180)||(16909885-16910063)
chr3 (1-95)||(15941710-15941804)
chr3 (1-110)||(16797860-16797969)
chr3 (1-110)||(16808687-16808796)
chr3 (125-193)||(37439900-37439969)
chr3 (151-221)||(4111209-4111276)
chr3 (151-221)||(15965051-15965118)
chr3 (151-221)||(15968975-15969042)
chr3 (151-221)||(15972899-15972966)
chr3 (151-221)||(16750548-16750615)
chr3 (151-221)||(19775847-19775914)
chr3 (151-221)||(37439596-37439663)
chr3 (142-212)||(7109792-7109862)
chr3 (142-212)||(7113727-7113797)
chr3 (142-212)||(22321758-22321828)
chr3 (142-212)||(22336813-22336883)
chr3 (142-212)||(27409589-27409659)
chr3 (142-212)||(28949818-28949888)
chr3 (151-221)||(8489425-8489497)
chr3 (1-180)||(16369543-16369721)
chr3 (151-221)||(4107357-4107424)
chr3 (141-193)||(15964745-15964797)
chr3 (141-193)||(15968669-15968721)
chr3 (141-193)||(15972593-15972645)
chr3 (55-176)||(15051655-15051775)
chr3 (55-180)||(15060427-15060551)
chr3 (1-80)||(16690441-16690519)
chr3 (1-80)||(16697014-16697092)
chr3 (1-79)||(1598286-1598364)
[»] chr5 (53 HSPs)
chr5 (1-239)||(24221951-24222188)
chr5 (1-231)||(12028371-12028600)
chr5 (1-231)||(22757207-22757436)
chr5 (1-231)||(17918957-17919186)
chr5 (3-229)||(23451431-23451655)
chr5 (3-229)||(23462936-23463160)
chr5 (1-238)||(26680657-26680890)
chr5 (1-238)||(26952264-26952497)
chr5 (3-229)||(23458675-23458899)
chr5 (1-231)||(123111-123340)
chr5 (1-229)||(1858782-1859010)
chr5 (74-231)||(20805634-20805788)
chr5 (74-219)||(21366544-21366688)
chr5 (77-229)||(20767058-20767207)
chr5 (125-221)||(18356037-18356134)
chr5 (125-221)||(20911099-20911196)
chr5 (1-223)||(31342215-31342417)
chr5 (123-221)||(10753109-10753208)
chr5 (1-110)||(18356518-18356627)
chr5 (1-110)||(20232741-20232850)
chr5 (1-110)||(20910606-20910715)
chr5 (1-101)||(17410647-17410747)
chr5 (1-101)||(33409428-33409528)
chr5 (148-219)||(24767497-24767568)
chr5 (1-196)||(15236586-15236779)
chr5 (1-101)||(16674352-16674452)
chr5 (1-79)||(21340573-21340651)
chr5 (1-79)||(26665937-26666015)
chr5 (1-79)||(26937534-26937612)
chr5 (4-109)||(23572285-23572390)
chr5 (11-79)||(26742562-26742630)
chr5 (1-115)||(18769809-18769923)
chr5 (1-115)||(22032516-22032630)
chr5 (1-79)||(42805642-42805720)
chr5 (1-106)||(23535395-23535500)
chr5 (1-101)||(17718245-17718345)
chr5 (1-93)||(25229212-25229304)
chr5 (1-93)||(25293368-25293460)
chr5 (1-79)||(24532854-24532932)
chr5 (1-93)||(4036428-4036520)
chr5 (151-221)||(10753443-10753510)
chr5 (142-212)||(20295938-20296008)
chr5 (125-193)||(11220521-11220590)
chr5 (125-193)||(11228930-11228999)
chr5 (125-193)||(11230919-11230988)
chr5 (125-177)||(40723851-40723904)
chr5 (141-193)||(11226940-11226992)
chr5 (148-219)||(17410523-17410595)
chr5 (1-80)||(21884995-21885073)
chr5 (1-80)||(26172686-26172764)
chr5 (125-186)||(11225114-11225176)
chr5 (142-212)||(19472665-19472735)
chr5 (169-219)||(23535560-23535610)
[»] scaffold0637 (1 HSPs)
scaffold0637 (1-231)||(8642-8871)
[»] scaffold0439 (2 HSPs)
scaffold0439 (1-239)||(2241-2479)
scaffold0439 (1-239)||(10101-10339)
[»] scaffold0410 (2 HSPs)
scaffold0410 (1-231)||(11460-11680)
scaffold0410 (157-231)||(2250-2325)
[»] chr8 (43 HSPs)
chr8 (1-229)||(22010484-22010707)
chr8 (1-231)||(16861132-16861360)
chr8 (1-229)||(20856230-20856458)
chr8 (1-229)||(39094747-39094957)
chr8 (74-229)||(30643169-30643324)
chr8 (74-231)||(16410133-16410288)
chr8 (74-219)||(17926585-17926728)
chr8 (1-229)||(20465844-20466071)
chr8 (78-231)||(15602899-15603051)
chr8 (78-231)||(15611351-15611503)
chr8 (1-110)||(23834364-23834473)
chr8 (1-197)||(30308560-30308754)
chr8 (1-180)||(377414-377592)
chr8 (125-221)||(14398037-14398134)
chr8 (1-221)||(16231281-16231501)
chr8 (1-110)||(18619669-18619778)
chr8 (1-101)||(22028757-22028857)
chr8 (1-95)||(15532094-15532188)
chr8 (1-95)||(15538654-15538748)
chr8 (1-101)||(23846821-23846921)
chr8 (1-79)||(24434043-24434121)
chr8 (125-193)||(21410723-21410792)
chr8 (125-193)||(21805215-21805284)
chr8 (151-221)||(18862605-18862672)
chr8 (153-221)||(21383733-21383801)
chr8 (151-221)||(21827974-21828041)
chr8 (39-110)||(22045075-22045146)
chr8 (60-180)||(19259446-19259565)
chr8 (142-212)||(19278228-19278298)
chr8 (151-221)||(21387153-21387223)
chr8 (142-212)||(21972530-21972600)
chr8 (142-212)||(21976615-21976685)
chr8 (142-212)||(22111942-22112012)
chr8 (77-181)||(24755856-24755959)
chr8 (125-193)||(21828278-21828347)
chr8 (3-80)||(22166189-22166265)
chr8 (141-193)||(18862926-18862978)
chr8 (151-221)||(21411029-21411096)
chr8 (151-221)||(21805521-21805588)
chr8 (1-80)||(22113534-22113612)
chr8 (1-80)||(22135037-22135115)
chr8 (142-196)||(43251920-43251974)
chr8 (1-30)||(17828389-17828418)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-229)||(30550-30776)
[»] scaffold1326 (1 HSPs)
scaffold1326 (1-229)||(1295-1522)
[»] scaffold0346 (1 HSPs)
scaffold0346 (1-229)||(15170-15397)
[»] scaffold0015 (1 HSPs)
scaffold0015 (2-221)||(192123-192342)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-212)||(4030-4240)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-231)||(35316-35546)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-231)||(7076-7305)
[»] scaffold1220 (1 HSPs)
scaffold1220 (1-229)||(1876-2102)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-219)||(19097-19314)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-219)||(66221-66438)
[»] scaffold0031 (3 HSPs)
scaffold0031 (1-219)||(53648-53865)
scaffold0031 (151-221)||(36046-36113)
scaffold0031 (125-193)||(36350-36419)
[»] scaffold0676 (2 HSPs)
scaffold0676 (1-231)||(4512-4741)
scaffold0676 (151-221)||(530-597)
[»] scaffold0367 (1 HSPs)
scaffold0367 (78-231)||(979-1130)
[»] scaffold0412 (1 HSPs)
scaffold0412 (74-231)||(6294-6449)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-221)||(19823-20043)
[»] scaffold0483 (1 HSPs)
scaffold0483 (1-140)||(494-631)
[»] scaffold0476 (2 HSPs)
scaffold0476 (32-229)||(5669-5865)
scaffold0476 (32-229)||(6864-7060)
[»] scaffold0037 (2 HSPs)
scaffold0037 (55-229)||(21428-21601)
scaffold0037 (125-221)||(80618-80715)
[»] scaffold0104 (2 HSPs)
scaffold0104 (74-231)||(1912-2067)
scaffold0104 (74-228)||(9597-9749)
[»] scaffold0029 (5 HSPs)
scaffold0029 (1-221)||(80794-81012)
scaffold0029 (141-221)||(80460-80540)
scaffold0029 (1-109)||(12964-13072)
scaffold0029 (142-212)||(65473-65543)
scaffold0029 (142-212)||(61557-61627)
[»] scaffold0109 (4 HSPs)
scaffold0109 (1-140)||(45281-45418)
scaffold0109 (1-110)||(7135-7244)
scaffold0109 (142-219)||(35888-35965)
scaffold0109 (141-193)||(36221-36273)
[»] scaffold0177 (1 HSPs)
scaffold0177 (1-211)||(13293-13501)
[»] scaffold0079 (1 HSPs)
scaffold0079 (74-231)||(44163-44318)
[»] scaffold0012 (3 HSPs)
scaffold0012 (1-197)||(24774-24969)
scaffold0012 (151-221)||(189337-189404)
scaffold0012 (125-193)||(189641-189710)
[»] scaffold0425 (1 HSPs)
scaffold0425 (55-229)||(243-417)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-221)||(2479-2697)
[»] scaffold0615 (1 HSPs)
scaffold0615 (1-229)||(1889-2117)
[»] scaffold0393 (1 HSPs)
scaffold0393 (74-219)||(1587-1731)
[»] scaffold0124 (1 HSPs)
scaffold0124 (74-229)||(42709-42860)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-221)||(228179-228399)
[»] scaffold0405 (1 HSPs)
scaffold0405 (1-197)||(9471-9666)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-229)||(16926-17144)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-229)||(18461-18688)
[»] scaffold0051 (1 HSPs)
scaffold0051 (125-221)||(30964-31061)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-219)||(12987-13204)
scaffold0044 (1-219)||(19271-19488)
[»] scaffold0228 (1 HSPs)
scaffold0228 (1-221)||(18438-18657)
[»] scaffold0210 (2 HSPs)
scaffold0210 (1-115)||(21611-21725)
scaffold0210 (1-115)||(29503-29617)
[»] scaffold1296 (1 HSPs)
scaffold1296 (74-229)||(477-631)
[»] scaffold0299 (1 HSPs)
scaffold0299 (125-221)||(6760-6857)
[»] scaffold0035 (1 HSPs)
scaffold0035 (74-229)||(46605-46759)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-93)||(5806-5898)
[»] scaffold1461 (1 HSPs)
scaffold1461 (1-221)||(9-229)
[»] scaffold0017 (2 HSPs)
scaffold0017 (61-229)||(15075-15243)
scaffold0017 (61-229)||(19597-19765)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-110)||(3336-3445)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-197)||(10390-10584)
[»] scaffold0525 (1 HSPs)
scaffold0525 (1-212)||(3682-3890)
[»] scaffold0349 (1 HSPs)
scaffold0349 (1-196)||(12529-12722)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-101)||(10103-10203)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-229)||(373-590)
[»] scaffold0166 (1 HSPs)
scaffold0166 (148-219)||(9994-10065)
[»] scaffold1124 (1 HSPs)
scaffold1124 (1-115)||(2076-2190)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-110)||(6063-6172)
[»] scaffold0293 (1 HSPs)
scaffold0293 (125-221)||(20393-20490)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-110)||(23407-23516)
[»] scaffold0016 (1 HSPs)
scaffold0016 (125-208)||(207766-207850)
[»] scaffold1052 (1 HSPs)
scaffold1052 (148-219)||(2999-3070)
[»] scaffold0761 (1 HSPs)
scaffold0761 (78-239)||(6191-6351)
[»] scaffold0284 (1 HSPs)
scaffold0284 (1-101)||(18554-18654)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-101)||(9620-9720)
[»] scaffold0042 (3 HSPs)
scaffold0042 (1-101)||(64053-64153)
scaffold0042 (77-181)||(34791-34894)
scaffold0042 (1-86)||(75952-76037)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-79)||(36527-36605)
[»] scaffold1552 (1 HSPs)
scaffold1552 (1-110)||(544-653)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-180)||(6883-7061)
[»] scaffold0022 (1 HSPs)
scaffold0022 (154-219)||(73725-73790)
[»] scaffold0334 (1 HSPs)
scaffold0334 (41-101)||(18206-18266)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-110)||(15224-15332)
[»] scaffold0415 (1 HSPs)
scaffold0415 (151-221)||(476-543)
[»] scaffold0229 (2 HSPs)
scaffold0229 (151-221)||(11461-11528)
scaffold0229 (125-193)||(11765-11834)
[»] scaffold0141 (2 HSPs)
scaffold0141 (151-221)||(14047-14114)
scaffold0141 (125-193)||(14351-14420)
[»] scaffold0157 (2 HSPs)
scaffold0157 (151-206)||(32620-32675)
scaffold0157 (125-193)||(32924-32993)
[»] scaffold0372 (1 HSPs)
scaffold0372 (142-212)||(5046-5116)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-115)||(7490-7604)
[»] scaffold0028 (1 HSPs)
scaffold0028 (142-212)||(58664-58734)
[»] scaffold0268 (1 HSPs)
scaffold0268 (142-197)||(953-1008)
[»] scaffold0185 (1 HSPs)
scaffold0185 (169-219)||(33642-33692)
[»] scaffold0056 (1 HSPs)
scaffold0056 (89-181)||(13970-14061)
[»] scaffold0149 (2 HSPs)
scaffold0149 (77-185)||(3872-3980)
scaffold0149 (77-185)||(8303-8411)


Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 20907787 - 20908024
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20907787 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 20907886  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||  ||||  || |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20907887 tgttaactagaatc--tgggaagttgttaagaattgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcaa 20907984  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  20907985 gatgttgttgaaatgaattgttgttatgaaattatgatgt 20908024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27567415 - 27567644
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||| |||| | |||||  ||||||||||||  || |||| ||||||||||||| |||||||||| ||||||||||||||||    
T  27567415 cgagcacttccagaactgagtgttttttataatgtcgtgacctgagttgaatgaattgcttaggaatggaacattaggtagtactgaaacctatttaaga 27567514  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||| | | ||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||| | |||    
T  27567515 tgtcagccgaaatctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgatttatgcttgaataaacta 27567612  T
Q  200 gatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||||||||||||||||||||||||||    
T  27567613 gatgttgttgaaatgaattgttgttatgaaat 27567644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 19790585 - 19790814
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| || |||||| |||||  ||||||||||||  || |||| ||||||||||| | |||||||||||||||||||||||||||    
T  19790585 cgagcacttccagaactgaatgtttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaaga 19790683  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||     
T  19790684 tgttaactgagacctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactt 19790781  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  19790782 gatgttgttgaaaatgaattgttgttatgaaat 19790814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 22408111 - 22408336
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||| ||| |||| ||||||||||||||| |||||||| | | || |||||||||    
T  22408111 cgagcacttccagaactgagtgcaattgagaatgttgtgacctgagttgcttgaattgattaggaatggaactt-aggtagtagtaagacttatttaaga 22408209  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||| |||||||| |||||   ||||  |||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22408210 tgttaattgaaatctgtgagac--tgttt-gaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattcttgaatgatcta 22408306  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||||||||||||||||||||||    
T  22408307 gatgttgttgaaatgaattgttgttatgaa 22408336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18180803 - 18180577
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||| |||||||||||  |||||||||||| ||| |||| |||||||||||||||||||||||| | | || |||||||||    
T  18180803 cgagcacttccagaactgaatgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtagtaagacatatttaaga 18180704  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||||||||| | ||  | ||||   ||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||  |    
T  18180703 tgttaactgaaatctgtaag--gctgtttc-aactgttaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgattaa 18180607  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||||||||||||||||||||||    
T  18180606 gatgttgttgaaatgaattgttgttatgaa 18180577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 23657226 - 23657416
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||| |||||||||| ||||||||||||||||||||||   | |||| | |||    
T  23657226 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgttcggattggttaagaatggaactttaggtagtaatatgatctatgtgaga 23657325  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||||||| |||| ||||  | ||||| ||  ||||||    |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  23657326 tgttaactgagatctgtgag--gctgttatgatatgttaagctgttgtaatgtgatttaaagattaaatgcattacttgatttattcttgaat 23657416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 17804497 - 17804280
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  17804497 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaaga 17804398  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  17804397 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 17804300  T
Q  201 atgttgttgaa-atgaattg 219  Q
    | ||||||||| ||||||||    
T  17804299 aagttgttgaagatgaattg 17804280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18907422 - 18907195
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||| ||||||   ||||||||||  || ||| || |  || |||| ||||| ||||| | |||||||||||||  ||||||||||||    
T  18907422 cgagcacttccagaacagagtgcaaatgagaatgttgcgatctgtgtcgcatgaattgattagggatggacccttaggtagtaatgtgacctatttaaga 18907323  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||| ||| | |||  || ||||| |||||||||| ||  || ||||||||||||| |||||| ||||||||||||| |||| |||||||||| |    
T  18907322 tgttaactgcaatatgtga--agctgttatgaactgttaagttcattataatgtgatttaatgattaattgcattacttgaaatattattgaatgatcaa 18907225  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||||||||||||||| | |||||||    
T  18907224 gatgttgttgaaatgaattgatattatgaa 18907195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 27553413 - 27553606
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  27553413 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaaga 27553512  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    ||| | |   ||||  || ||||||||                 |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  27553513 tgtcagccagaatc--tgtgaagttgt-----------------ttgtaatgtgatttaacgattaaatgcattacttgatttattcttgaataaactag 27553593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 22863246 - 22863053
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||| |||||||||||||| |  ||  ||||||||| ||||| ||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  22863246 cgagcacttccagaattgagtgcttttgaggaatttgagacctgagtcgtttg-attggattaggaatggaactttaggtactaatgagacctatctaag 22863148  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||||||||   | |||| |||| |||   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  22863147 atgttaactg--ttatttgtgaagctgtattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 22863053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 14472570 - 14472361
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||||| |||||    
T  14472570 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaaga 14472471  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  |    
T  14472470 tgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcagg 14472373  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  14472372 aagttgttgaaa 14472361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 1644550 - 1644453
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  1644550 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatatttttgaatgatcaagatgttgttgaaatgaattgtt 1644453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 21834783 - 21834922
Alignment:
Q  89 acctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattc 187  Q
    ||||||||||||||||||||||||||| |||  || |||| |  |||| ||| ||| || ||||||||||||| ||||||||| |||||||||| ||||     
T  21834783 acctatttaagatgttaactgaaatctgtga--agctgttta--actgctaagttgattataatgtgatttaatgattaaatgtattacttgaaatatta 21834878  T
Q  188 ttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||| | |||||||||    
T  21834879 ttgaatgatcaagatgttgttgaaatgaattgatattatgaaat 21834922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 23414822 - 23414725
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  23414822 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 23414725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 27556580 - 27556483
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  27556580 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 27556483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 31478074 - 31478171
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||    
T  31478074 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 31478171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 25766985 - 25767191
Alignment:
Q  12 agaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaa 111  Q
    |||||||| ||| |||||| || ||  ||||||||||| |||| ||| ||||||| ||||||||||||| |||||| ||||||||||||| ||||||||     
T  25766985 agaactgattgcatttgaggattttgagacctgagttgcttgggttgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgag 25767084  T
Q  112 atctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaa 211  Q
    | |  || |||  | ||| ||| || ||| || || |||||| |||||  |||| | |||||||||||||||||| |||||||||| ||| |||||||||    
T  25767085 aac--tgtgaaactattatgaaatgctaagtgattataatgtaatttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaa 25767182  T
Q  212 -atgaattg 219  Q
     ||||||||    
T  25767183 gatgaattg 25767191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27415748 - 27415857
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| ||||||| |||||| || ||  ||||||||||| |||||||| ||||||  ||||| ||||||| |||||| ||||||||||||    
T  27415748 cgagcacttccagaattgagtgcatttgaggattttgagacctgagttgcttggattgattaggagaggaaccttaggtactaatgagacctatttaaga 27415847  T
Q  101 tgttaactga 110  Q
    ||||||||||    
T  27415848 tgttaactga 27415857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12496608 - 12496508
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| |||||||||||||| ||  |  |||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||    
T  12496608 cgagcacttccagaattgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactttaggtagttatgagacctattaaaga 12496509  T
Q  101 t 101  Q
    |    
T  12496508 t 12496508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 22429836 - 22430045
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| ||||||||  ||  ||| | || || ||| |||| ||||||||||||||||||||  |  ||| ||||||||||||    
T  22429836 cgagcacttccagaactgagtgcatttgagaagtttgagactttaggtgcttgaattgattaggaatggaactttaggttatggtgagacctatttaaga 22429935  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    ||||| |||| | || |||  |||| ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| || ||||||| ||    
T  22429936 tgttagctgagaactgtga--agttattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattaaatgatcaag 22430033  T
Q  201 atgttgttgaaa 212  Q
    |  |||||||||    
T  22430034 aaattgttgaaa 22430045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 16741506 - 16741298
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||| ||||||||||||||||||  |||||||||||| || ||| ||||||| ||||    
T  16741506 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagtcgtttggattggttaggaaatgaactttaggtactagtgagacctattaaaga 16741407  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatcta 199  Q
    | || ||||| |   ||| |||| | ||| ||| |||||| || || ||| |||| |||  |||| | |||| |||||||||||||| |||||||||| |    
T  16741406 tattgactgaga--attgtgaagcttttatgaaatgttaagtgattataaagtgaattatggattgattgcatttacttgaattattattgaatgatcaa 16741309  T
Q  200 gatgttgttga 210  Q
    ||  |||||||    
T  16741308 gaaattgttga 16741298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 27416122 - 27416219
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||  || ||||  ||||||||| |||||||||||||||||||||||    
T  27416122 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactctaaatattaatgaatgatcaagatgttgttgaaatgaattgtt 27416219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18955569 - 18955677
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||  ||| |||||||||||||| |  ||  ||| |||||| ||||||||| ||||||||||||||||||||| |||||| |||||| |||||    
T  18955569 cgagcacttctcgaattgagtgcttttgaggagtttgagacttgagttttttggattgtttaggaatggaactttaggtactaatgagacctatataaga 18955668  T
Q  101 tgttaactg 109  Q
    |||||||||    
T  18955669 tgttaactg 18955677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12706988 - 12706880
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||||||||| |||||| | ||| ||||||| |||||||| ||||||| | ||||||||||| |||||| ||||||| |||    
T  12706988 cgagcacttccagaactgagtgcttttgaggaatgtga-gacttgagttgcttggattgattaggaa-gaaactttaggtactaatgagacctattaaag 12706891  T
Q  100 atgttaactga 110  Q
    || || |||||    
T  12706890 atattgactga 12706880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1587537 - 1587629
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||| ||||||| ||  |  ||| ||||||||||||||| |||||||| ||||||||||||  |||||| |||||    
T  1587537 cgagcacttccagaactgagtgtttttgaggattgtgagacttgagttgtttggattagttaggaaaggaactttaggtgctaatgagaccta 1587629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 16523336 - 16523407
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||||||| |||||| |||||||| |||| |||| |||||||||| |||||||| ||||||||||||    
T  16523336 taatgtgatttaatgattaattgcattacctgaaatattattgaatgatcaagatgttgatgaaatgaattg 16523407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 2685129 - 2685203
Alignment:
Q  5 cacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| |||||| |||||    
T  2685129 cacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactctaggt 2685203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5616620 - 5616698
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||| ||||| | |||||||||| ||||||||||||    
T  5616620 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagtcgtttgaaatggttaggaaaggaactttaggt 5616698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 21766839 - 21766777
Alignment:
Q  169 tgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  21766839 tgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaaat 21766777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19663068 - 19662995
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactt 74  Q
    |||||||||||| ||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| |||||||    
T  19663068 cgagcacttccaaaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactt 19662995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9482099 - 9482184
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatg 86  Q
    ||||||||||||||| |||||| ||| ||| ||  |  ||||| ||| |||||||||||||||||| ||||||||||||| |||||    
T  9482099 cgagcacttccagaattgagtgttttagaggattgtgagacctaagtggtttggattggttaggaaaggaactttaggtactaatg 9482184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 14472096 - 14472044
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  14472096 ttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 14472044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 16624278 - 16624211
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  16624278 tgtgaattaatgattaaatgcattacttgaagtattattgaatgatcaaga---tgttgaaatgaattgtt 16624211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 16760441 - 16760374
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  16760441 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 16760374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 18956044 - 18956096
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  18956044 ttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 18956096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 22059550 - 22059630
Alignment:
Q  3 agcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagta 83  Q
    |||||||| ||||||||||||  ||||||||||  |||| ||||||| ||| |||| | ||||||| ||||||||||||||    
T  22059550 agcacttctagaactgagtgcaattgagaatgtcgtgacttgagttgcttgaattgatgaggaatgaaactttaggtagta 22059630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22592610 - 22592710
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| |||||||||| ||  |  ||| |||| ||||| | ||||||||||| | ||||||||||| |||||  ||||||| ||||    
T  22592610 cgagcacttccagaactgaatgcttttgaggattgtgagacatgagctgtttagtttggttaggaaagaaactttaggtactaatgtgacctattaaaga 22592709  T
Q  101 t 101  Q
    |    
T  22592710 t 22592710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 31477770 - 31477837
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  31477770 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 31477837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 22949254 - 22949199
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  22949254 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 22949199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 22953210 - 22953155
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  22953210 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 22953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 23871698 - 23871643
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  23871698 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 23871643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 23875654 - 23875599
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  23875654 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 23875599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 1644866 - 1644796
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  1644866 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 1644796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 8244022 - 8243952
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  8244022 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 8243952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 11567023 - 11566953
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  11567023 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 11566953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 19870751 - 19870681
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  19870751 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 19870681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 23395229 - 23395159
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  23395229 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 23395159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 23990081 - 23990011
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  23990081 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 23990011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 12618798 - 12618867
Alignment:
Q  150 atgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||||  |||| | |||||||||||||||||| ||||||||||  |  |||||||||||||||||    
T  12618798 atgtgatttattgattgattgcattacttgaattattattgaatgatcagggagttgttgaaatgaattg 12618867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 16760137 - 16760068
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  16760137 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 16760068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 22948933 - 22948881
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  22948933 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 22948881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 22952889 - 22952837
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  22952889 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 22952837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 23871377 - 23871325
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  23871377 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 23871325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 23875333 - 23875281
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  23875333 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 23875281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1645005 - 1644927
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||| ||||||| ||||||||||||| ||| ||||||||||||    
T  1645005 cgagcacatccagaattgagtgcttttgaggagtttgagacgtgagttgcttggattggttagaaat-gaactttaggta 1644927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 15894310 - 15894413
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcatta 175  Q
    ||||||||||  |||||| || ||||||||||  ||||| |||  || ||||| ||| |||||| ||| || ||||||||||||| |||||| |||||||    
T  15894310 ggtagtaatgtgacctatataggatgttaactacaatctgtga--agctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcatta 15894407  T
Q  176 cttgaa 181  Q
    ||||||    
T  15894408 cttgaa 15894413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 18917211 - 18917281
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||| ||||||||||| ||||||||||  || ||||||||||    
T  18917211 tgtttataatgtgatttattgattgattgcattgcttgaattattattgaatgatcaggaagttgttgaaa 18917281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 16523281 - 16523322
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatct 115  Q
    |||||||||||||  |||||||||||||||||||||| ||||    
T  16523281 ttaggtagtaatgtgacctatttaagatgttaactgagatct 16523322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20803359 - 20803451
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||| |||||| || |||| || ||  |  ||| ||||||||||||||| ||||||||  |||||||||||  |||||| |||||    
T  20803359 cgagcacttccataactgactgttttttaggattgtgagacttgagttgtttggattagttaggaaaagaactttaggtgctaatgagaccta 20803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 181; Significance: 7e-98; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 422337 - 422574
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  422337 cgagcacttccagaacagagtgcttttgaggatgtaatgatctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 422436  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||  ||||  || |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  422437 tgttaactagaatc--tgtgaagttgttaagaactattaagttgtttgtaatgtgatttaacgactaaatgcattacttgaattattcttgaatgatcta 422534  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  422535 gatgttgttgaaatgaattgttgttatgaaattatgatgt 422574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 173590 - 173371
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||| |||||||||| |||||| || ||  ||| ||||||| |||||||| ||||||| ||||||||||||| ||| || ||||||| ||||    
T  173590 cgagcacttccataactgagtgcatttgaggattttgagacttgagttgcttggattgattaggaaaggaactttaggtactaaagagacctattaaaga 173491  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | ||||  |||| | ||| ||| || ||| || || || |||||| ||  |||| | |||||||||||||||||| |||||||||  ||    
T  173490 tattaactgagaacttt--gaagctattatgaaatgctaagtgattatattgtgatatattgattgattgcattacttgaattattattgaatgataaag 173393  T
Q  201 atgttgttg-aaatgaattgtt 221  Q
    |  |||||| ||||||||||||    
T  173392 aaattgttgaaaatgaattgtt 173371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 3704870 - 3705099
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3704870 cgagcacttccagaaccgagtgcttttgacaatgttatgacctgatttgtttggattggctaggaatggaactttaggtagtaatgaaacctatttaaga 3704969  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| | | ||||  || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  3704970 tgttagccggaatc--tgtgaagttgttaagaactattaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacta 3705067  T
Q  200 gatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||||||||||||||||||||||||||    
T  3705068 gatgttgttgaaatgaattgttgttatgaaat 3705099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 45489549 - 45489778
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||  || |||| ||||||||||| | |||||||||||||||||||||||||||    
T  45489549 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaaga 45489647  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||     
T  45489648 tgttaactgagacctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattctcgaataaactt 45489745  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  45489746 gatgttgttgaaaatgaattgttgttatgaaat 45489778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 17678393 - 17678619
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||| ||| |||| |||||||||||||||||||||||| | | || |||||||||    
T  17678393 cgagcacttccagaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtagtaagacatatttaaga 17678492  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||||||||| | ||  | ||||  |||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||  |    
T  17678493 tgttaactgaaatctgtaag--gctgtt-tgaactgttaagttgtttgtaatgttatttaatgattaaatgcattacttgaaatattattgaatgattaa 17678589  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||||||||||||||||||||||    
T  17678590 gatgttgttgaaatgaattgttgttatgaa 17678619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 45310172 - 45310399
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||| ||||||||||||||||||||| |||  |||||||||||| ||| |||| |||||||||||||||||||||||||||   |||||||||||    
T  45310172 cgagcactttcagaactgagtgcttttgagattgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtaatgtggcctatttaaga 45310271  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| |||  || |||| ||||| ||| ||||||  ||||||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||     
T  45310272 tgttaactgagatc--tgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattgcttgatttattcttgaataacctt 45310369  T
Q  200 gatgttgttg-aaatg-aattgttgttatg 227  Q
    || ||||||| ||||| |||||||||||||    
T  45310370 gaagttgttgaaaatgaaattgttgttatg 45310399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 18393769 - 18393979
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||  ||||| |||||||||||||| |||  |||||||||||| ||| |||| |||||||||||||||||||||||||||  ||||||||||||    
T  18393769 cgagcacttatagaacggagtgcttttgagattgtcgtgacctgagttgattgaattgattaggaatggaactttaggtagtaatgtgacctatttaaga 18393868  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| |||  || |||| ||||| ||| ||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||     
T  18393869 tgttaactgagatc--tgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataacctt 18393966  T
Q  200 gatgttgttgaaa 212  Q
    || ||||||||||    
T  18393967 gaagttgttgaaa 18393979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 8761442 - 8761655
Alignment:
Q  5 cacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgtt 104  Q
    |||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8761442 cacttccagaactgagtgcttttgagaacgtcgtgacctgagttgcttggattggttaggaatggaactttaggtagtagtgaaacctatataagatgtt 8761541  T
Q  105 aactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatg 203  Q
    || |||||||  || |||| ||||| ||||| ||||  |  || | ||||||||||  |||||| ||||||||||||  |||| |||||| ||| |||||    
T  8761542 aaatgaaatc--tgtgaagctgttatgaactattaagctaattatgatgtgatttattgattaattgcattacttgagatattattgaataatcaagatg 8761639  T
Q  204 ttgttgaaatgaattg 219  Q
    ||||||||||||||||    
T  8761640 ttgttgaaatgaattg 8761655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 22449071 - 22449300
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| ||| |||||||| ||| |||| ||||||||||| | |||||||||||||  || ||| |||||    
T  22449071 cgagcacttccagaactgagtgcaaatgagaatgttgtgatctgagttgcttgaattgattaggaatggacccttaggtagtaatgtgacatatataaga 22449170  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||| ||||  || |||| ||||| |||||||||| ||| || ||||||||||||| |||||| | ||||||||||| |||| |||||||||| |    
T  22449171 tgttaactgcaatc--tgtgaagctgttatgaactgttaagttgattataatgtgatttaatgattaatttcattacttgaaatattattgaatgatcaa 22449268  T
Q  200 gatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||||||| | |||| | |||||||||    
T  22449269 gatgttgttgaaaagtattgatattatgaaat 22449300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 16080250 - 16080459
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| || ||| || ||  ||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  16080250 cgagcacttccagaactgagtgcattcgaggattttgagacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaaga 16080349  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
      |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| ||| |||||| ||    
T  16080350 gattaactgagaac--tgtgaagcttttatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattggatgatcaag 16080447  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  16080448 aagttgttgaaa 16080459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 36819114 - 36819323
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| ||||||||  ||   |||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  36819114 cgagcacttccagaactgagtgcatttgagaagtttgaaacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaaga 36819213  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||| ||| | |  || |||| | ||| ||| |||||| || || || |||||||||   ||| | |||||| ||||||||||| |||||||||| ||    
T  36819214 tattaaatgagaac--tgtgaagcttttatgaaatgttaagtgattatattgtgatttatttattgattgcatttcttgaattattattgaatgatcaag 36819311  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  36819312 aagttgttgaaa 36819323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 20229073 - 20229170
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  20229073 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 20229170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 24782906 - 24783115
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| |||||||||||| ||||||||  ||  | | | || || ||| |||| ||||||||||||||||| ||  || ||| ||||| ||||||    
T  24782906 cgagcacttctagaactgagtgcatttgagaagtttgaggctttaggtgcttgaattgattaggaatggaactttaagttatagtgagacctacttaaga 24783005  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    ||||||||||||   ||| |||| ||||| ||| || ||| || || ||||||||||||   ||||| |||||||||||||||||| |||||||||| ||    
T  24783006 tgttaactgaaaa--ttgtgaagctgttatgaaatgctaagtgattataatgtgatttattaattaattgcattacttgaattattattgaatgatcaag 24783103  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  24783104 aagttgttgaaa 24783115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 1011023 - 1010830
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| ||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  1011023 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttg-attggattaggaatggaactttaggtactaatgagacctatctaag 1010925  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  1010924 atgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 1010830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 33049984 - 33050065
Alignment:
Q  155 atttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaatgatga 236  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||| ||||    
T  33049984 atttaacgattaaatgcattacttgaattattcttgaataaactagatgttgatgaaatggattgttattatgaaattatga 33050065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 33797459 - 33797362
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||| | ||| |||| |||||||||| |||||||||||||||||||||||    
T  33797459 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattaatcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 33797362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33797833 - 33797724
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||  ||||||  ||||| ||||||| |||||| ||||||||||||    
T  33797833 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattaattaggagaggaaccttaggtactaatgagacctatttaaga 33797734  T
Q  101 tgttaactga 110  Q
    ||||||||||    
T  33797733 tgttaactga 33797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19212167 - 19211947
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||| |||||||||| |||||| ||  |  ||||||||||| |||||||||||||||| ||||||||||||| |||||| ||||||  ||||    
T  19212167 cgagcacttccaaaactgagtgcatttgaggattgtgagacctgagttgcttggattggttaggaaaggaactttaggtactaatgagacctataaaaga 19212068  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatcta 199  Q
    | || ||||| | |  || |||| | ||| ||| |||||| || || ||| |||| |||  |||| | || | |||||||||||||| |||||||||| |    
T  19212067 tattgactgagaac--tgtgaagcttttatgaaatgttaagtgattataaagtgaattatggattgattgtatttacttgaattattgttgaatgatcaa 19211970  T
Q  200 gatgttgttga-aatgaattgtt 221  Q
    ||  ||||||| |||||||||||    
T  19211969 gaaattgttgagaatgaattgtt 19211947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 229
Target Start/End: Original strand, 3472804 - 3472957
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||| ||||||||||  | ||||| |||  || ||||| ||| || ||| ||||||| |||||||||||| ||||||||| |    
T  3472804 ttaggtagtaatgtgacctatt-aagatgttaatgggaatctgtga--agctgttatgaaatgctaagttgtttgaaatgtgatttaatgattaaatgaa 3472900  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||| |||| |||||||||| ||||||||||||| ||| ||| | |||||||    
T  3472901 ttacttgaaatattgttgaatgatcaagatgttgttgaagtgatttgatattatgaa 3472957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 33049893 - 33049989
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaa 98  Q
    ||||||||||||||||||| ||||||||| |||||  | ||||||||||  || |||| |||||||| |||| |||||||||||||||||||||||||    
T  33049893 cgagcacttccagaactgaatgcttttgataatgtcgtaacctgagttgaatgaattgattaggaat-gaacattaggtagtaatgaaacctatttaa 33049989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 18182065 - 18182153
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||| |||||||||| || |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| ||||| | |||||||    
T  18182065 ttgtttataatgtgattcaatgattaattgcattacttgaaatattattgaatgatcaagatgttgttgaaataaattgatattatgaa 18182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46975767 - 46975667
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||| |||||||||||  |||||||||||| |||||  ||||||| ||||    
T  46975767 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggtttggttaggaaatgaactttaggtactaatgtgacctattaaaga 46975668  T
Q  101 t 101  Q
    |    
T  46975667 t 46975667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12647169 - 12647096
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactt 74  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| |||||||    
T  12647169 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactt 12647096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18882667 - 18882558
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| ||||||||||||||||||| ||     |||||||| ||||||||||||||||||| ||||||||||||  || ||| |||||||  |||    
T  18882667 cgagcacttcaagaactgagtgcttttgaggattgcgagacctgagctgtttggattggttaggaaaggaactttaggtgctagtgagacctattagaga 18882568  T
Q  101 tgttaactga 110  Q
    | ||||||||    
T  18882567 tattaactga 18882558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 21022952 - 21022768
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||| ||| ||  |||||||||  ||| ||| |||| |||  ||| ||| | ||||| | |||||||||||||  |||||| |||||    
T  21022952 cgagcacttccagaactcagtactagtgagaatgtcgtgatctgtgttgcttgatttgattaaggatggacccttaggtagtaatgtgacctatataaga 21022853  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattatt 186  Q
    ||||||||| ||||  || |||| | ||| ||||||||||  || || |||||||| |||| |||||| ||||||||||||| ||||    
T  21022852 tgttaactgcaatc--tgtgaagctattatgaactgttaagctgattataatgtgaattaatgattaattgcattacttgaaatatt 21022768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23819105 - 23819214
Alignment:
Q  1 cgagcacttccagaactgagtgcttttg-agaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    |||||||||||||||||||||| ||||| ||| ||| | ||||||||| ||||||| |||||||||| ||||| ||||||  |||||| ||||||| |||    
T  23819105 cgagcacttccagaactgagtgtttttgaagattgtga-gacctgagtggtttggaatggttaggaaaggaaccttaggtgctaatgagacctattaaag 23819203  T
Q  100 atgttaactga 110  Q
    || || |||||    
T  23819204 atattgactga 23819214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20138383 - 20138283
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| |||| | ||| ||| ||  |  ||||||||| |||||||||||||||| | ||||||||||||| |||||| ||||||| ||||    
T  20138383 cgagcacttccagaattgagagttttagaggattgtgagacctgagtggtttggattggttagggaaggaactttaggtactaatgagacctattaaaga 20138284  T
Q  101 t 101  Q
    |    
T  20138283 t 20138283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 1925393 - 1925462
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  1925393 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 1925462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 20924407 - 20924476
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  20924407 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 20924476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 22831183 - 22831361
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||| |||||||||||  |||||||||||  || ||| || |  ||  ||| ||||| |||||   |||||||||||||  |||||| || ||    
T  22831183 cgagcacttcctgaactgagtgcaattgagaatgttgcgatctgtgtcgcatgacttgtttagggatggactcttaggtagtaatgtgacctatatagga 22831282  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaa 181  Q
    |||||| || ||||| |||  || ||||| ||| |||||  || || ||||||||||||| |||||| |||||||||||||    
T  22831283 tgttaattgcaatctgtga--agctgttatgaaatgttagctgattataatgtgatttaatgattaattgcattacttgaa 22831361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 1925089 - 1925156
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  1925089 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 1925156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 20924103 - 20924170
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  20924103 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 20924170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 39244101 - 39244156
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  39244101 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 39244156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 39247656 - 39247711
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  39247656 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 39247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 41388201 - 41388256
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  41388201 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 41388256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 6152169 - 6151990
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||| | | || |||||  || ||| || |  || |||| ||||| |||||   |||||||||||||  |||||| || ||    
T  6152169 cgagcacttccagaactgaatgcatgttaggatgttgcgatctgtgtcgcatgaattgattagggatggactcttaggtagtaatgtgacctatatagga 6152070  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgcattacttgaa 181  Q
    |||||| || ||||| |||  || ||||| ||| ||||||  ||||| ||||||||||||| |||||| |||||||||||||    
T  6152069 tgttaattgcaatctgtga--agctgttatgaaatgttaagctgtttataatgtgatttaatgattaattgcattacttgaa 6151990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 16375403 - 16375473
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  16375403 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 16375473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 20228754 - 20228824
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  20228754 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 20228824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 21407516 - 21407446
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  21407516 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 21407446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 52639702 - 52639632
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  52639702 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 52639632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 42865092 - 42865200
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat--tgtttgtaatgtgatttaacgattaaatgcatt 174  Q
    ||||||||||  |||||| |||||||||||||| ||||| |||  || ||||| |||  ||||||  || || ||||||||||||| |||||| ||||||    
T  42865092 ggtagtaatgtgacctatataagatgttaactgcaatctgtga--agctgttatgaaaggttaatgttgattataatgtgatttaatgattaattgcatt 42865189  T
Q  175 acttgaattat 185  Q
    |||||| ||||    
T  42865190 acttgagttat 42865200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21305614 - 21305566
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttg 49  Q
    ||||||||||||||||||||||| |||||| || ||  |||||||||||    
T  21305614 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttg 21305566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 15353112 - 15353350
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15353112 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatctaaga 15353211  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat-ct 198  Q
    ||||||||| ||  |||| |||| ||||| ||| ||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||| || ||    
T  15353212 tgttaactggaa--tttgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataatcct 15353309  T
Q  199 agatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
     |||||||||||||||||||||||||||||||| |||||||    
T  15353310 tgatgttgttgaaatgaattgttgttatgaaattatgatgt 15353350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 16351654 - 16351891
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| ||  |  ||||||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  16351654 cgagcacttccagaactgaatgcttttgataaaatcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaaga 16351753  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| | | |||  ||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  16351754 tgttagccggaat--ttgtgaagtttttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacta 16351851  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  16351852 gatgttgttgaaatgaattgttgttatgaatttatgatgt 16351891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 11250367 - 11250596
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||  || |||| ||||||||||| | |||||||||||||||||||||||||||    
T  11250367 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaaga 11250465  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||     
T  11250466 tgttaactgagacctatga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacatgaattattcttgaataaactt 11250563  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  11250564 gatgttgttgaaaatgaattgttgttatgaaat 11250596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 25555816 - 25555587
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||||||||  || |||| ||||||||||| | ||||||||||||||||| |||||||||    
T  25555816 cgagcacttccagaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacttatttaaga 25555718  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||     
T  25555717 tgttaactgagacctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactt 25555620  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  25555619 gatgttgttgaaaatgaattgttgttatgaaat 25555587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 16356831 - 16356986
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||  || ||||  |||||| ||| || ||||||||||||||||| |||||||||||    
T  16356831 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtga--agctgttt-gaactgctaagttttttgtaatgtgatttaatgattaaatgca 16356927  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||| |||| |||||||||| ||||||||| ||||||||||| | |||||||||    
T  16356928 ttacttgaaatattattgaatgatcaagatgttgtggaaatgaattgatattatgaaat 16356986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 5338801 - 5339003
Alignment:
Q  16 ctgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatct 115  Q
    |||||||| |||||||||||  |||||||| ||| ||| |||| ||||||||||||| |||||||||| ||| |||||| ||||||||||| |||||||     
T  5338801 ctgagtgcatttgagaatgtcgtgacctgaattgattgaattgattaggaatggaacattaggtagtagtgagacctatataagatgttaaatgaaatc- 5338899  T
Q  116 ttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatg 214  Q
     ||||||| ||||| ||||  ||||  || || | ||||||||||  |||||| ||||||||||||  |||| |||||| ||| |||| |||||||||||    
T  5338900 -tgagaagctgttatgaaccattaagctgattatgatgtgatttattgattaattgcattacttgagatattattgaataatcaagattttgttgaaatg 5338998  T
Q  215 aattg 219  Q
    |||||    
T  5338999 aattg 5339003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 17810572 - 17810363
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||||| |||||    
T  17810572 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaaga 17810473  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||   | |||| |||| | |   ||| |||||| ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  |    
T  17810472 tgttaactg--ttatttgtgaagctatattgaaatgttaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcagg 17810375  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  17810374 aagttgttgaaa 17810363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 16348543 - 16348698
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||  || | || | ||||| ||| |||||||||||||||||||| |||||||||||    
T  16348543 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtga--agcttttta-aactgctaagttgtttgtaatgtgatttaatgattaaatgca 16348639  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    |||||| || |||| |||||| ||| ||||||||| ||||||||||| | |||||||||    
T  16348640 ttacttaaaatattattgaattatcaagatgttgtggaaatgaattgatattatgaaat 16348698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 36133768 - 36133976
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||| ||| ||||||| | ||||||||||| |||||| ||||||||||||    
T  36133768 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttgggttgattaggaaagaaactttaggtattaatgagacctatttaaga 36133867  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||  | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||| ||||| ||||||||||  |    
T  36133868 tattaactgggaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgagttattattgaatgatcagg 36133965  T
Q  201 atgttgttgaa 211  Q
    | |||||||||    
T  36133966 aagttgttgaa 36133976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 14757228 - 14757421
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||| ||||||| |||||||||||||| | |||  ||||||||| |||| |||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  14757228 cgagcacatccagaattgagtgcttttgaggaagttgagacctgagtcgttt-gattggattaggaatggaactttaggtactaatgagacctatctaag 14757326  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  14757327 atgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 14757421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 43256341 - 43256438
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  43256341 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 43256438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 229
Target Start/End: Original strand, 16487956 - 16488110
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||   ||||||||||||||||| ||| |||| |||  || |  || ||||||||||  || || ||||||||||||| |||||||||||    
T  16487956 ttaggtagtaatgtgtcctatttaagatgttaattgagatctgtga--agctactatgaactgttaagctgattataatgtgatttaatgattaaatgca 16488053  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||| |||| |||||||||| |||||||||||||| |||||| | |||||||    
T  16488054 ttacttgaaatattattgaatgatcaagatgttgttgaaaagaattgatattatgaa 16488110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 20157411 - 20157482
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  20157411 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatctagatgttgttgaaatgaattg 20157482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1951567 - 1951676
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||| ||||| || ||| | ||||||||||||||| |||||||||||| ||||||||||||| |||||| ||||| | |||    
T  1951567 cgagcacttccagaactgagtgcatttgaagattgtga-gacctgagttgtttgaattggttaggaaaggaactttaggtactaatgagacctaataaag 1951665  T
Q  100 atgttaactga 110  Q
    || ||||||||    
T  1951666 atattaactga 1951676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 13812970 - 13813051
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||    
T  13812970 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaa 13813051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9530733 - 9530633
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||||||||||||  ||||||||| ||||| ||||||| |||||| ||||||| ||||    
T  9530733 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggaaaggttaggaaaggaaccttaggtactaatgagacctattaaaga 9530634  T
Q  101 t 101  Q
    |    
T  9530633 t 9530633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43255967 - 43256075
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||| |||||| |||||| || ||  ||||| ||||| |||||||| ||||||  ||||| ||||||| |||||| ||||||||||||    
T  43255967 cgagcacttccagaaccgagtgcatttgaggatttttagacctaagttgcttggattgattaggagaggaaccttaggtactaatgagacctatttaaga 43256066  T
Q  101 tgttaactg 109  Q
    |||||||||    
T  43256067 tgttaactg 43256075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23139570 - 23139492
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| ||||||||||||    
T  23139570 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactttaggt 23139492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17152293 - 17152402
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||| |||||||||||| ||||||||| | ||||||||||||  |||||| ||||||| ||||    
T  17152293 cgagcacttccagaactgagtgcttttgaggattgtgagacttgagttgtttggtttggttagggaaggaactttaggtgttaatgagacctattaaaga 17152392  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  17152393 tattgactga 17152402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19757407 - 19757507
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||| |||||||| ||  |  |||||||| ||||||| ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  19757407 cgagcacttccagaactgagtacttttgaggattgtgagacctgagctgtttggtttggttaggaaaggaactttaggtactaatgtgacctattaaaga 19757506  T
Q  101 t 101  Q
    |    
T  19757507 t 19757507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19782399 - 19782299
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||| |||||||| ||  |  |||||||| ||||||| ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  19782399 cgagcacttccagaactgagtacttttgaggattgtgagacctgagctgtttggtttggttaggaaaggaactttaggtactaatgtgacctattaaaga 19782300  T
Q  101 t 101  Q
    |    
T  19782299 t 19782299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 26243473 - 26243549
Alignment:
Q  3 agcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| ||||||||||||    
T  26243473 agcacttccagaactgagtgcttttgaggattgtcagacctgagctgtttggattggttaggaaaggaactttaggt 26243549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18237192 - 18237114
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||| ||||||| |||||||||| ||||||||||||    
T  18237192 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagtcgtttggaatggttaggaaaggaactttaggt 18237114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3413096 - 3412996
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| |||||||||| ||  |  |||||||||  ||||||||||||||||  ||||| ||||||| |||||| ||||||| ||||    
T  3413096 cgagcacttccagaactgaatgcttttgaggattgtgagacctgagtgatttggattggttaggagaggaaccttaggtactaatgagacctattaaaga 3412997  T
Q  101 t 101  Q
    |    
T  3412996 t 3412996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 18222184 - 18222284
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| ||||||  |||||| ||  |  | |||||||||||||||||||||||||| ||||||||||||  |||||| ||||||| ||||    
T  18222184 cgagcacttccagaattgagtgtatttgaggattgtgagccctgagttgtttggattggttaggaaaggaactttaggtgctaatgagacctattaaaga 18222283  T
Q  101 t 101  Q
    |    
T  18222284 t 18222284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 15225033 - 15224960
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    |||| ||| |||| |||||||||||||||||||| |||| |||||||| | |||||||||| ||||||||||||    
T  15225033 taatatgaattaatgattaaatgcattacttgaaatattattgaatgaccaagatgttgttaaaatgaattgtt 15224960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16243206 - 16243306
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| | |||| ||| ||| ||  |  ||||||||| |||||||||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  16243206 cgagcacttccagaattcagtgttttagaggattgtgagacctgagtggtttggattggttaggaaaggaactttaggtactaatgtgacctattaaaga 16243305  T
Q  101 t 101  Q
    |    
T  16243306 t 16243306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 18228699 - 18228759
Alignment:
Q  41 cctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagat 101  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||| ||||||| |||||    
T  18228699 cctgagttgtttggattggttaggaaaggaactttaggtgctaatgagacctattaaagat 18228759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 22634373 - 22634437
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||| |||  |||||||||    
T  22634373 taatgtgaattaatgattaaatgcattacttgaattattattgaatgatcaagaaattgttgaaa 22634437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 45938447 - 45938353
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatt 95  Q
    ||||||||||||||||| |||||||||||| ||     ||| |||| |||||||||||||||| || ||||||||||||  |||||| |||||||    
T  45938447 cgagcacttccagaactaagtgcttttgaggattgagagacttgagctgtttggattggttagaaaaggaactttaggtgctaatgagacctatt 45938353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 10712698 - 10712629
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  10712698 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 10712629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 10926468 - 10926399
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  10926468 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 10926399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2015078 - 2014978
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| |||||| ||| ||| ||  |  ||||||||| ||||||||||||||||||  |||||||||||| ||| |  ||||||| ||||    
T  2015078 cgagcacttccagaattgagtgttttagaggattgtgagacctgagtggtttggattggttaggaaatgaactttaggtactaaggtgacctattaaaga 2014979  T
Q  101 t 101  Q
    |    
T  2014978 t 2014978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 10712999 - 10712932
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  10712999 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 10712932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 10926769 - 10926702
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  10926769 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 10926702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27534325 - 27534218
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||| ||||||| |||||||| |||| ||  |||||||||||| |||||| |||||| | |||    
T  27534325 cgagcacatccagaattgagtgcttttgaggagtttgagacttgagttgcttggattgtttag-aaccgaactttaggtactaatgagacctatctgaga 27534227  T
Q  101 tgttaactg 109  Q
    |||||||||    
T  27534226 tgttaactg 27534218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 12487857 - 12487802
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  12487857 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 12487802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 14954127 - 14954182
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  14954127 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 14954182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 25690016 - 25689961
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  25690016 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 25689961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 5756883 - 5756953
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  5756883 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 5756953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 12570259 - 12570156
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcatta 175  Q
    ||||||||||  |||||| || ||||||||||| ||||| |||  || ||||| ||| |||||| ||| || ||||||||||||| |||||| |||||||    
T  12570259 ggtagtaatgtgacctatataggatgttaactgcaatctgtga--agctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcatta 12570162  T
Q  176 cttgaa 181  Q
    ||||||    
T  12570161 cttgaa 12570156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 12487553 - 12487484
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  12487553 tgttatgaactgctaagttgtttttaatgtgatttaatgattaaatgcattactcgaaatattattgaat 12487484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 33742530 - 33742461
Alignment:
Q  150 atgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||||  |||| | |||||||||||||||||| ||||||||||  |  |||||||||||||||||    
T  33742530 atgtgatttattgattgattgcattacttgaattattattgaatgatcagggagttgttgaaatgaattg 33742461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 14954448 - 14954500
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  14954448 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 14954500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 25689695 - 25689643
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  25689695 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 25689643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 27533851 - 27533799
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||||||||||||| ||| |||||||||||||||| ||| |||| ||||||    
T  27533851 ttgtttgtaatgtgatataatgattaaatgcattactcgaaatattattgaat 27533799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 4561279 - 4561333
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  4561279 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 4561333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 9556691 - 9556621
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||| | ||||||||||  || ||||||||||    
T  9556691 tgtttataatgtgatttattgattgattgcattacttgaattagtattgaatgatcaggaagttgttgaaa 9556621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 28569251 - 28569328
Alignment:
Q  2 gagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    |||||||||||||| |||||| ||| | | ||  |  |||||||||||||||||||||||| ||| |||||||||||||    
T  28569251 gagcacttccagaattgagtgttttagtggattgtgagacctgagttgtttggattggtta-gaaaggaactttaggta 28569328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 17152464 - 17152512
Alignment:
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    |||||||||||||| |||||||||| ||   ||||||||||||||||||    
T  17152464 ttacttgaattattattgaatgatcaaggaattgttgaaatgaattgtt 17152512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 165; Significance: 2e-88; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 413856 - 414085
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||   |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||| ||| |||||    
T  413856 cgagcacttccagaactgaatgtaattgagaatgttatgacctgagttgcttggattggttaggaatggaaccttaggtagtaaagaaacatatataaga 413955  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||| ||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  413956 tgttaactggaatctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 414053  T
Q  200 gatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||||||| ||||||||||||||||||    
T  414054 gatgttgttgaaacgaattgttgttatgaaat 414085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 71239 - 71142
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||||||| |||||||||||||||||| | |||||||||||||| || || |||| |||||||||| |||||||||||||||||||||||    
T  71239 tgttatgaactgttaagttgtttgtaatgtgattttatgattaaatgcattattttaaatattattgaatgatcaagatgttgttgaaatgaattgtt 71142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 71613 - 71504
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| ||||||| |||||| || ||  ||||||||||| |||||||| ||||||  ||||| ||||||| |||||| ||||||||||||    
T  71613 cgagcacttccagaattgagtgcatttgaggattttgagacctgagttgcttggattgattaggagaggaaccttaggtactaatgagacctatttaaga 71514  T
Q  101 tgttaactga 110  Q
    ||||||||||    
T  71513 tgttaactga 71504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 140010 - 139932
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| ||||||||||||    
T  140010 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactttaggt 139932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 9445964 - 9446201
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||||  || |||| ||||||||||||||||||||||||||||||| |||||||||    
T  9445964 cgagcacttccagaactgaatgcttttgataatgttgtgacctgagttgaatgaattgattaggaatggaactttaggtagtaatgaaacatatttaaga 9446063  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| | | ||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  9446064 tgttagccggaatctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacta 9446161  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  9446162 gatgttgttgaaatgaattgttgttatgaaattatgatgt 9446201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 20569402 - 20569631
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| |||||||| || |||| | |||||  ||||||||||||  || |||| ||||||||||| | |||||||||||||||||||||||||||    
T  20569402 cgagcacttctagaactgaatgttttttataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaaga 20569500  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| |||| |  | |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||     
T  20569501 tgttagctgatacatgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactt 20569598  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  20569599 gatgttgttgaaaatgaattgttgttatgaaat 20569631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 2760442 - 2760215
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||  |||||| |||| |||||||||||| ||| |||| |||||||||||||||||||||||| | | || |||||||||    
T  2760442 cgagcacttccagaactgagtgcaattgagattgttgtgacctgagttgcttgaattgattaggaatggaactttaggtagtagtaagacatatttaaga 2760343  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||||||||| ||||  | |||| | ||||| ||| |||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||      
T  2760342 tgttaactgaaatctgtgag--gctgttta-aactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgagatattattgaatgatcat 2760246  T
Q  200 gatgttgttg-aaatgaattgttgttatgaa 229  Q
    |||||||||| |||||||||| | |||||||    
T  2760245 gatgttgttgaaaatgaattgatattatgaa 2760215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3272134 - 3271918
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||| |||||||||| ||| |||||| |||||    
T  3272134 cgagcacttccagaactgagtgcttttgagaatgttgtgacctgagttgattgaattgattaggaatggaacattaggtagtagtgagacctatataaga 3272035  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||| |||||  | || |||| ||||| ||||| ||||  || || | ||||||||||  |||||| ||||||||||||| |||| |||||| ||| |    
T  3272034 tgttaaatgaaa--tatgtgaagctgttatgaactattaagctgattatgatgtgatttactgattaattgcattacttgaa-tattattgaataatcaa 3271938  T
Q  200 gatgttgttgaaatgaattg 219  Q
    |||||||| |||||||||||    
T  3271937 gatgttgtagaaatgaattg 3271918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 11312947 - 11312731
Alignment:
Q  2 gagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagat 101  Q
    |||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| ||||||| ||||||||||||| |||||| |||||||||||||    
T  11312947 gagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagat 11312848  T
Q  102 gttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctaga 201  Q
     |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| |||    
T  11312847 attaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaaga 11312750  T
Q  202 tgttgttgaa-atgaattg 219  Q
     ||||||||| ||||||||    
T  11312749 agttgttgaagatgaattg 11312731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 12318427 - 12318218
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| ||||||||  ||  |||| |||||| ||||| |||||||||| ||||||||||||| |||||| ||||||||||||    
T  12318427 cgagcacttccagaactgagtgcatttgagaagtttgagaccggagttgcttggaatggttaggaaaggaactttaggtactaatgagacctatttaaga 12318328  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| |||||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||  ||    
T  12318327 tattaactgagaac--tgtgaagctattatgaaatgttaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgattaag 12318230  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  12318229 aagttgttgaaa 12318218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 15605082 - 15605287
Alignment:
Q  5 cacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgtt 104  Q
    |||||| |||||||||||| |||||| |  ||  |||| |||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||| ||    
T  15605082 cacttctagaactgagtgcatttgaggactttgagacccgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaagatatt 15605181  T
Q  105 aactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgt 204  Q
    |||||| | |  || |||| | ||| ||| |||||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||| ||    
T  15605182 aactgagaac--tgtgaagctattatgaaatgttaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagt 15605279  T
Q  205 tgttgaaa 212  Q
    ||||||||    
T  15605280 tgttgaaa 15605287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 12321547 - 12321774
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||   || ||| || |  || |||| ||||| |||||   |||||||||||||  |||||| |||||    
T  12321547 cgagcacttccagaactgagtgcaaatgagaatgtagcgatctgtgtcgcatgaattgattagggatggactcttaggtagtaatgtgacctatataaga 12321646  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||| ||||| ||| |   ||||| |||||||||| ||| || ||||||||||||| |||||| ||||||||||||| |||| | |||||||| |    
T  12321647 tgttaactgcaatctgtgaaac--tgttatgaactgttaagttgattataatgtgatttaatgattaattgcattacttgaaatattatggaatgatcaa 12321744  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||||||||||||||| | |||||||    
T  12321745 gatgttgttgaaatgaattgatattatgaa 12321774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 14430120 - 14429976
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||||||| |||| |||  || || || ||||||||||  || || ||||||||||||| |||||| ||||    
T  14430120 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtga--agctgctatgaactgttaagctgattataatgtgatttaatgattaattgca 14430023  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||| |||| |||||||||| |||||||| ||||||||||||    
T  14430022 ttacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 14429976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48593262 - 48593371
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||| ||||| || ||| | |||||||||||||||||||||||||||| ||||||||||||| || ||| |||||||||||    
T  48593262 cgagcacttccagaactgagtgcatttgaagattgtga-gacctgagttgtttggattggttaggaaaggaactttaggtactactgagacctatttaag 48593360  T
Q  100 atgttaactga 110  Q
    || ||||||||    
T  48593361 atattaactga 48593371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13462061 - 13461952
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||| |||||||||| ||||||||||||  |||||| ||||||| ||||    
T  13462061 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggaatggttaggaaaggaactttaggtgctaatgagacctattaaaga 13461962  T
Q  101 tgttaactga 110  Q
    |||| |||||    
T  13461961 tgttgactga 13461952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 42205410 - 42205305
Alignment:
Q  5 cacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgtt 104  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||  || ||||  ||||||||||||||||||||||||||  |||||||| |||||||    
T  42205410 cacttccagaactgagttcttttgagaatgatgtgacctgagttgaatgaattgagtaggaatggaactttaggtagtaatgtgacctatttgagatgtt 42205311  T
Q  105 aactga 110  Q
    ||||||    
T  42205310 aactga 42205305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 33407 - 33214
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| |||||  | | |||||||||||||||||||||||||||| |||||| |||||    
T  33407 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgtttggattaggaatggaactttaggtagtaatgagacctatctaaga 33308  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    |||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  33307 tgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 33214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16583555 - 16583347
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||| ||||||| |||||||| |||||||  |||| ||||||| |||||| |||||| |||||    
T  16583555 cgagcacttccagaactgagtgcatttgaggattttgagacttgagttgcttggattgattaggaagtgaaccttaggtactaatgagacctatataaga 16583456  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||| | |||| | |||||||||||||||||| |||||||||| ||    
T  16583455 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgattt-atgattgattgcattacttgaattattgttgaatgatcgag 16583359  T
Q  201 atgttgttgaaa 212  Q
    |  |||||||||    
T  16583358 aaattgttgaaa 16583347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 70571 - 70761
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||| ||||    
T  70571 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttg-attggattaggaatggaactttaggtagtaatgagacctatctaag 70669  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||    
T  70670 atgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaat 70761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 74680 - 74870
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||| ||||    
T  74680 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttg-attggattaggaatggaactttaggtagtaatgagacctatctaag 74778  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||    
T  74779 atgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaat 74870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9593645 - 9593536
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||| ||||| || ||| | |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| | |||    
T  9593645 cgagcacttccagaactgagtgcatttgaagattgtga-gacctgagttgtttggattggttaggaaaggaactttaggtactaatgagacctaataaag 9593547  T
Q  100 atgttaactga 110  Q
    || ||||||||    
T  9593546 atattaactga 9593536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9644608 - 9644499
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||| ||||| || ||| | |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| | |||    
T  9644608 cgagcacttccagaactgagtgcatttgaagattgtga-gacctgagttgtttggattggttaggaaaggaactttaggtactaatgagacctaataaag 9644510  T
Q  100 atgttaactga 110  Q
    || ||||||||    
T  9644509 atattaactga 9644499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 25927431 - 25927525
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaatt 218  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||    
T  25927431 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaatt 25927525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18864 - 18973
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||| ||||| ||  |  |||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||| ||||    
T  18864 cgagcacttccagaactgagtgctattgaggattgtgagacctgagttgtttggattggttaggaaaggaactttaggtgctaatgagacctattaaaga 18963  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  18964 tattgactga 18973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 13918708 - 13918805
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| ||||||||| |||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  13918708 tgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 13918805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 1859014 - 1859111
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| ||||||||| |||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||| ||||||||    
T  1859014 tgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaaagaattgtt 1859111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 13635275 - 13635484
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||| ||||||| |||||||| ||||  |  |||| ||||||| ||||||  |||||||||||    
T  13635275 cgagcacttccagaactgagtgcatttgaggattttgagacttgagttgcttggattgattagataatgaaccttaggtactaatgaggcctatttaaga 13635374  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | ||||| || | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  13635375 tattaacagagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 13635472  T
Q  201 atgttgttgaaa 212  Q
    |  |||||||||    
T  13635473 aaattgttgaaa 13635484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 2832393 - 2832464
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  2832393 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 2832464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17137868 - 17137982
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| ||| ||| |||| ||| |||| ||||| ||||| | |||||||||||||| |||||| |||||    
T  17137868 cgagcacttccagaactgagtgcaagtgagaatgttgtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgagacctatataaga 17137967  T
Q  101 tgttaactgaaatct 115  Q
     |||||||| |||||    
T  17137968 agttaactgcaatct 17137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 9751707 - 9751788
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||| | |||||||    
T  9751707 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttggaatgaattgatattatgaa 9751788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 39267851 - 39267932
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||| |||| |||||||||||||||||||| || | |||||||||| ||||||||||||||||||||| | |||||||    
T  39267851 taatgtgaattaatgattaaatgcattacttgaaatagtattgaatgatcaagatgttgttgaaatgaattgatattatgaa 39267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 15580991 - 15580798
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||| |||||||||| ||||||||  ||  | | | || || ||| |||| ||||||||||||||||||||  || ||| ||||||||| ||    
T  15580991 cgagcacttccaaaactgagtgcatttgagaagtttgaggctttaggtgcttgaattgattaggaatggaactttaggttatagtgagacctatttagga 15580892  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    |||||||||||| |  || |||| | ||| ||| || ||| || || ||||||||||||   ||| | |||||||||||||||||| |||||||||    
T  15580891 tgttaactgaaaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattaattgattgcattacttgaattattattgaatgat 15580798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16438840 - 16438940
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||| |||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| ||||||||||||  || ||| ||||||| ||||    
T  16438840 cgagcacttcctgaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactttaggtgctagtgagacctattaaaga 16438939  T
Q  101 t 101  Q
    |    
T  16438940 t 16438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 7519324 - 7519383
Alignment:
Q  162 gattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  7519324 gattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 7519383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16724437 - 16724546
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||| |||||||||||||||||||| ||  |  ||| |||||||||||||  ||||||||| ||||| ||||||| |||||| ||||||| ||||    
T  16724437 cgagcactttcagaactgagtgcttttgaggattgtgagacttgagttgtttggaaaggttaggaaaggaaccttaggtactaatgagacctattaaaga 16724536  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  16724537 tattgactga 16724546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17701451 - 17701560
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||| |||||||||||||||||||| ||  |  ||| |||||||||||||  ||||||||| ||||| ||||||| |||||| ||||||| ||||    
T  17701451 cgagcactttcagaactgagtgcttttgaggattgtgagacttgagttgtttggaaaggttaggaaaggaaccttaggtactaatgagacctattaaaga 17701550  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  17701551 tattgactga 17701560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13149454 - 13149354
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| |||||| ||| ||| ||  |  ||||||||| |||||||||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  13149454 cgagcacttccagaattgagtgttttagaggattgtgagacctgagtggtttggattggttaggaaaggaactttaggtactaatgtgacctattaaaga 13149355  T
Q  101 t 101  Q
    |    
T  13149354 t 13149354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15728624 - 15728532
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||| ||||||| ||  |  ||| ||||||||||||||| |||||||| ||||||||||||  |||||| |||||    
T  15728624 cgagcacttccagaactgagtgtttttgaggattgtgagacttgagttgtttggattagttaggaaaggaactttaggtgctaatgagaccta 15728532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 42204151 - 42204076
Alignment:
Q  157 ttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||| ||||||||||||||||||| |||||||||||| | || |||||||||| |||||||||||||| |||||||    
T  42204151 ttaatgattaaatgcattacttgatttattcttgaataaccttgatgttgttgaaaatgaattgttgtcatgaaat 42204076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8917726 - 8917626
Alignment:
Q  1 cgagcacttccagaactgagtgcttttg-agaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    |||||||||||||||||||||||||||| ||| ||| | ||||||||| ||||||| ||||| |||| |||||||| |||  |||||| ||||||| |||    
T  8917726 cgagcacttccagaactgagtgcttttgaagattgtga-gacctgagtagtttggaatggttcggaaaggaactttgggtgctaatgagacctattaaag 8917628  T
Q  100 at 101  Q
    ||    
T  8917627 at 8917626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 14217214 - 14217122
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||||||||||| ||  |  | | ||||||||||||||| |||||||| |||||| |||||  |||||| |||||    
T  14217214 cgagcacttccagaactgagtgcttttgaggattgtgaggcttgagttgtttggattagttaggaaaggaactgtaggtgctaatgagaccta 14217122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6801512 - 6801438
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttgga-ttggttaggaatggaactt 74  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| |||||||| ||||||||||| |||||||    
T  6801512 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggatttggttaggaaaggaactt 6801438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 12704604 - 12704674
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||| ||||||||||  || ||||||||||    
T  12704604 tgtttataatgtgatttattgattgaatgcattacttgaattattattgaatgatcaggaagttgttgaaa 12704674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 39722427 - 39722357
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||||| |||||||||||||||||| ||||||||||  || ||||||||||    
T  39722427 tgtttataatgtgatttattgattaattgcattacttgaattattattgaatgatcaggaagttgttgaaa 39722357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 39722108 - 39722039
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  39722108 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 39722039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 45169966 - 45170033
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  45169966 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 45170033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11987512 - 11987418
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatt 95  Q
    ||||||||||||||||||||||| ||||| || ||| | | | |||||||||||||||||||| ||| ||||| ||||||| || ||| |||||||    
T  11987512 cgagcacttccagaactgagtgcatttgatgattgtgagg-cttgagttgtttggattggttaagaaaggaaccttaggtactagtgagacctatt 11987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 12715025 - 12714955
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  12715025 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 12714955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 12718829 - 12718759
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  12718829 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 12718759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 12723740 - 12723670
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  12723740 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 12723670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 16114402 - 16114332
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  16114402 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 16114332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 16117555 - 16117485
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  16117555 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 16117485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 16907146 - 16907216
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  16907146 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 16907216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 18279564 - 18279494
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  18279564 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 18279494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 18283527 - 18283457
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  18283527 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 18283457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 18425578 - 18425517
Alignment:
Q  157 ttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  18425578 ttaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 18425517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 2530335 - 2530371
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattact 177  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2530335 ttgtttgtaatgtgatttaatgattaaatgcattact 2530371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 45170287 - 45170339
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  45170287 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 45170339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12704464 - 12704543
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||| |||| || |||||||||||||| |  ||  ||||||||| ||||| || | |||||||||||||||||||||    
T  12704464 cgagcacatccataattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttaggta 12704543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26292695 - 26292617
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||| ||||||| ||||||||||||| ||| ||||||||||||    
T  26292695 cgagcacatccagaattgagtgcttttgaggagtttgagacgtgagttgcttggattggttagaaat-gaactttaggta 26292617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39722566 - 39722488
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||||| |||||||||||||| |  ||  ||| ||||||  |||||||||||| |||| ||||||||||||    
T  39722566 cgagcacttccagaattgagtgcttttgaggagtttgagacttgagttacttggattggtta-gaattgaactttaggta 39722488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 15084038 - 15083976
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattatt 186  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| ||||    
T  15084038 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatatt 15083976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 7757 - 7545
Alignment:
Q  26 ttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagtt 125  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |||  ||||    
T  7757 ttgagaatgttatgacctgagttgcttagattggttaggaatggaaccttaggtagtaatgaaacctatataagatgttaactggaatctgtga--agtt 7660  T
Q  126 gttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgtt 224  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7659 gttaagaactgttaagttgtttgtaatgcgatttaacgaataaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgtt 7560  T
Q  225 atgaaatgatgatgt 239  Q
    ||||||| |||||||    
T  7559 atgaaattatgatgt 7545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 24175111 - 24174874
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  24175111 cgagcacttccagaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaaga 24175012  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| | | ||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  24175011 tgttagccggaatctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacta 24174914  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  24174913 gatgttgttgaaatgaattgttgttatgaaattatgatgt 24174874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 24655144 - 24655381
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| || ||  ||||||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  24655144 cgagcacttccagaactgaatgcttttgataaagtcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaaga 24655243  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| | | ||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  24655244 tgttagccggaatctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacta 24655341  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  24655342 gatgttgttgaaatgaattgttgttatgaaattatgatgt 24655381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25961340 - 25961567
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| ||  |  ||||||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  25961340 cgagcacttccagaactgaatgcttttgataaaatcgtgacctgagttgaatgaattgattaggaatggaacattaggtagtaatgaaacctatttaaga 25961439  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    ||||| ||| ||| | |||  | |||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25961440 tgttagctgcaatatgtga--atttgttatgaactgttaagttgttgtaatgtgatttaatgattaaatgcattacttgaattattcttgaatgatctag 25961537  T
Q  201 atgttgttg-aaatgaattgttgttatgaa 229  Q
    ||||||||| ||||||||||||||||||||    
T  25961538 atgttgttgaaaatgaattgttgttatgaa 25961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 24870190 - 24869964
Alignment:
Q  2 gagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagat 101  Q
    |||||||||||||||||| ||||||||| || ||  ||||||||||||  || ||||  |||||||| ||| ||||||||||||||||||||||||||||    
T  24870190 gagcacttccagaactgaatgcttttgataaggtcgtgacctgagttgaatgaattgagtaggaatgaaacattaggtagtaatgaaacctatttaagat 24870091  T
Q  102 gttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||| | | ||||| ||||  |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| | ||||    
T  24870090 gttagccggaatctgtgag--gttgttaagaactgctaagttgtttgtaatgtgatttaacgattaaatacattactcgaattattcttgaataaactag 24869993  T
Q  201 atgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||||||||||||||||||||||||    
T  24869992 atgttgttgaaatgaattgttgttatgaa 24869964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 24716336 - 24716562
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| ||| | ||||||  |||||||||||  ||||||||||| ||| |||| |||||||||||||||||||||||| ||| ||||||||||||    
T  24716336 cgagcacttctagagccgagtgcaattgagaatgttgagacctgagttgcttgaattgattaggaatggaactttaggtagtagtgagacctatttaaga 24716435  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||||| || ||||  | ||||  |||||| ||| ||||||||||||||||||||||||||||||||||||| ||  |||| |||||||||       
T  24716436 tgttaactgaaacctgtgag--gctgtt-tgaactgctaagttgtttgtaatgtgatttaacgattaaatgcattactagacatattattgaatgattat 24716532  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||||||||||||||||||||||    
T  24716533 gatgttgttgaaatgaattgttgttatgaa 24716562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 40428776 - 40428547
Alignment:
Q  1 cgagcacttccagaa-ctgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||  || ||||  ||||||||||||||  ||||||||||  |||||||||||    
T  40428776 cgagcacttccagaaactgagtgcttttgagaatgtcgtgacctgagttgaatgaattgagtaggaatggaacttagggtagtaatgtgacctatttaag 40428677  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatct 198  Q
    ||||||||||| |||  || |||| ||||| ||| ||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||| ||| | ||    
T  40428676 atgttaactgagatc--tgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttaaataacct 40428579  T
Q  199 agatgttgttg-aaatgaattgttgttatgaa 229  Q
     |||||||||| |||||||||||| |||||||    
T  40428578 tgatgttgttgaaaatgaattgttattatgaa 40428547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 25963595 - 25963750
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||| |||||||| |||  || ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  25963595 ttaggtagtaatgtgacctatttaagatgttaattgaaatctgtga--agctgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgca 25963691  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  25963692 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaaat 25963750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 19688562 - 19688780
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| |||||||  |||||||||||| |||||| ||||||||||||    
T  19688562 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggaaatgaactttaggtactaatgagacctatttaaga 19688661  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  19688662 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 19688759  T
Q  201 atgttgttgaa-atgaattgt 220  Q
    |  |||||||| |||||||||    
T  19688760 aaattgttgaagatgaattgt 19688780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21327372 - 21327589
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||| |||||||||||||  |||||||||||| |||||||||||| ||| ||||  |||||||||||||||| |||||| ||| || ||||||| |    
T  21327372 cgagcactcccagaactgagtgtatttgagaatgttttgacctgagttgattgaattgactaggaatggaactttaagtagtagtgagacatatttaaaa 21327471  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||| |||| ||  || |||| ||||| ||||| ||||  ||||| | ||||||||||  |||||| ||||||||||||  |||| |||||| ||| |    
T  21327472 tgttaagtgaattc--tgtgaagctgttatgaactattaagctgtttatgatgtgatttattgattaattgcattacttgagatattgttgaataatcaa 21327569  T
Q  200 gatgttgttgaaatgaattg 219  Q
    |||||||| |||||||||||    
T  21327570 gatgttgtagaaatgaattg 21327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21318441 - 21318658
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||| |||||||| ||||  |||||||||||  |||||||||||| ||| ||||  |||||||||||||||| |||||| ||| || |||||||||    
T  21318441 cgagcactcccagaactaagtgtatttgagaatgtcgtgacctgagttgattgaattgactaggaatggaactttaagtagtagtgagacatatttaaga 21318540  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||| ||||   | || |||| || || ||||| ||||  ||||| | ||||||||||  |||||| ||||||||||||  |||| |||||| ||| |    
T  21318541 tgttaagtgaa--ttatgtgaagctgctatgaactattaagctgtttatgatgtgatttattgattaattgcattacttgagatattgttgaataatcaa 21318638  T
Q  200 gatgttgttgaaatgaattg 219  Q
    |||||||| |||||||||||    
T  21318639 gatgttgtagaaatgaattg 21318658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 24735703 - 24735486
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||| |||||| || ||   ||| |||||| |||||||| ||| ||| ||||||||||||| |||||| ||||||||||||    
T  24735703 cgagcacttccagaactgattgcatttgaggattttgacacccgagttgcttggattgattaagaaaggaactttaggtactaatgagacctatttaaga 24735604  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| |  ||||||||||||||||| |||||||||| ||    
T  24735603 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgatcgcattacttgaattattattgaatgatcaag 24735506  T
Q  201 atgttgttgaa-atgaattg 219  Q
    | ||||||||| ||||||||    
T  24735505 aagttgttgaagatgaattg 24735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 67 - 219
Target Start/End: Original strand, 22811782 - 22811934
Alignment:
Q  67 tggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgatt 165  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||||| |||  || || || ||||| |||| ||| || ||||||||||||| ||||    
T  22811782 tggacctttaggtagtaatgtgacctatttaagatgttaagtgaaatctgtga--agctgctatgaactattaagttgattataatgtgatttaatgatt 22811879  T
Q  166 aaat-gcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||| ||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  22811880 aaattgcattacctgaagtattattgaatgatcaagatgttgttgaaatgaattg 22811934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 10101451 - 10101660
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| ||   ||||||||||||||||||||| |||||| |||||| |||||    
T  10101451 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatgaattaggaatggaactttaggtactaatgagacctatctaaga 10101550  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  |    
T  10101551 tgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcagg 10101648  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  10101649 aagttgttgaaa 10101660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 31345054 - 31344957
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||| | |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  31345054 tgttatgaactgctaagttgtttgtaatgtgatttcatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 31344957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 18855268 - 18855345
Alignment:
Q  2 gagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    ||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| ||||||||||||    
T  18855268 gagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactttaggt 18855345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22460996 - 22461069
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactt 74  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| |||||||    
T  22460996 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactt 22461069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 37524824 - 37524759
Alignment:
Q  164 ttaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    |||| ||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||||||||    
T  37524824 ttaattgcattacttgaaatattattgaatgatcaagatgttattgaaatgaattgttgttatgaa 37524759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 61115 - 61023
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||| ||||||| ||  |  ||| ||||||||||||||| |||||||| ||||||||||||  |||||| |||||    
T  61115 cgagcacttccagaactgagtgtttttgaggattgtgagacttgagttgtttggattagttaggaaaggaactttaggtgctaatgagaccta 61023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23187375 - 23187275
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||   ||||||||| ||||  ||||||| |||||| ||||||| ||||    
T  23187375 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttgggaaggttaggaaaggaatcttaggtactaatgagacctattaaaga 23187276  T
Q  101 t 101  Q
    |    
T  23187275 t 23187275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23598638 - 23598538
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||   ||||||||| ||||  ||||||| |||||| ||||||| ||||    
T  23598638 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttgggaaggttaggaaaggaatcttaggtactaatgagacctattaaaga 23598539  T
Q  101 t 101  Q
    |    
T  23598538 t 23598538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27263573 - 27263481
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||| ||||||| ||  |  ||| ||||||||||||||| |||||||| ||||||||||||  |||||| |||||    
T  27263573 cgagcacttccagaactgagtgtttttgaggattgtgagacttgagttgtttggattagttaggaaaggaactttaggtgctaatgagaccta 27263481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19928308 - 19928408
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| |||||| ||| ||| ||  |  ||||||||| |||||||| ||||||||| ||||||||||||| |||||  ||||||| ||||    
T  19928308 cgagcacttccagaattgagtgttttagaggattgtgagacctgagtggtttggatcggttaggaaaggaactttaggtactaatgtgacctattaaaga 19928407  T
Q  101 t 101  Q
    |    
T  19928408 t 19928408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 21916071 - 21916131
Alignment:
Q  169 tgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||    
T  21916071 tgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaa 21916131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 30345255 - 30345324
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  30345255 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 30345324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 41530955 - 41531031
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||| |||   |||||||||||||||||    
T  41530955 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaaga---tgttgaaatgaattgtt 41531031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 1283535 - 1283468
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  1283535 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 1283468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 30344951 - 30345018
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  30344951 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 30345018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 44370106 - 44370186
Alignment:
Q  3 agcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagta 83  Q
    |||||||| ||||||||||||  ||||||||||  |||| ||||||| ||| |||| | ||||||| ||||||||||||||    
T  44370106 agcacttctagaactgagtgcaattgagaatgtcgtgacttgagttgcttgaattgatgaggaatgaaactttaggtagta 44370186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 21918194 - 21918286
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaa 167  Q
    |||||||||||||  ||||||||||||||||||||||||||  || |||| || || ||||||||||  || || ||||||||||||| ||||||    
T  21918194 ttaggtagtaatgtgacctatttaagatgttaactgaaatc--tgtgaagctgctatgaactgttaagctgattataatgtgatttaatgattaa 21918286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 27601957 - 27601887
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  27601957 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 27601887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 1283231 - 1283162
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| ||||||||||||||||| || |||||||||||||||| ||| |||| ||||||    
T  1283231 tgttatgaactgctaagttgtttgtaatgtgattaaatgattaaatgcattactcgaaatattattgaat 1283162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 12901457 - 12901511
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  12901457 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 12901511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 24628424 - 24628494
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||| ||||||||||| ||||||||||  || ||||||||||    
T  24628424 tgtttataatgtgatttattgattgattgcattgcttgaattattattgaatgatcaggaagttgttgaaa 24628494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 24649518 - 24649464
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  24649518 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 24649464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 27379378 - 27379448
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||| ||||||| ||||||||||  || ||||||||||    
T  27379378 tgtttataatgtgatttattgattgattgcattactttaattattattgaatgatcaggaagttgttgaaa 27379448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 27383424 - 27383494
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||| ||||||| ||||||||||  || ||||||||||    
T  27383424 tgtttataatgtgatttattgattgattgcattactttaattattattgaatgatcaggaagttgttgaaa 27383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 41531268 - 41531337
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| ||||||||||||||||  || |||| ||||||    
T  41531268 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcnaaatattattgaat 41531337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 15477764 - 15477711
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatga 195  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||    
T  15477764 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatga 15477711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 45677961 - 45678074
Alignment:
Q  2 gagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagat 101  Q
    ||||||||||||||||||||||  ||||||||||| ||| ||| || |  ||  ||| ||||| |||||   |||||||||||||  |||||| || |||    
T  45677961 gagcacttccagaactgagtgcaattgagaatgttgtgatctgtgtcgcatgagttgattagggatggactcttaggtagtaatgtgacctatataggat 45678060  T
Q  102 gttaactgaaatct 115  Q
    ||||| || |||||    
T  45678061 gttaattgcaatct 45678074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 4e-81; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 11557190 - 11557427
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||||||||  || |||| ||||||||||||||||||||||||||||||||||||||||     
T  11557190 cgagcacttccagaactgaatgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatggaactttaggtagtaatgaaacctatttaagg 11557289  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| ||| ||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  11557290 tgttagctggaatctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaatta 11557387  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  11557388 gatgttgatgaaatgaattgttgttatgaaattatgatgt 11557427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 11594945 - 11595174
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||  || |||| ||||||||||| | |||||||||||||||||||||||||||    
T  11594945 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaaga 11595043  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||     
T  11595044 tgttaactgagacctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactt 11595141  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  11595142 gatgttgttgaaaatgaattgttgttatgaaat 11595174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1982616 - 1982843
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||| | ||||||||  ||  |||||||||||||||||||||||||||||||| | |||||||||||||  ||||| ||||||    
T  1982616 cgagcacttccagaactgagtacatttgagaagtttgagacctgagttgtttggattggttaggaatggagccttaggtagtaatgtgacctaattaaga 1982715  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    ||||||||| ||  | || |||||||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||| |||| |||||||| |||     
T  1982716 tgttaactgcaa--tatgtgaagttgttatgaactgttaagttattgtaatgtgatttaatgattaaatgcattacttgaactatttttgaatgacctat 1982813  T
Q  201 atgttgttg-aaatgaattgttgttatgaa 229  Q
    ||||||||| ||||||||||||||||||||    
T  1982814 atgttgttgaaaatgaattgttgttatgaa 1982843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 3389741 - 3389971
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||  || ||||  ||||||||||||||||||||||||||  ||||||||||||    
T  3389741 cgagcacttccagaactaagtgcttttgagaatgtcgtgacctgagttgaatgaattgagtaggaatggaactttaggtagtaatgtgacctatttaaga 3389840  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | |  || |||| ||||| ||| ||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||  | ||     
T  3389841 tgttaactgagacc--tgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaaaaacctt 3389938  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| |||||||||||||| |||||||    
T  3389939 gatgttgttgaaaatgaattgttgtcatgaaat 3389971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 42326244 - 42326023
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  | ||||||||||  || |||  ||  |||       |||||||||||||||||||||||||||    
T  42326244 cgagcacttccagaactgagtgcttttgataatgtcgtcacctgagttgaatgaattactt--gaa-------ttaggtagtaatgaaacctatttaaga 42326154  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| |   ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||     
T  42326153 tgttaactgaga--cttgtgaagttgttaagaactgttaacttgtttgtaatgtgatttaacgattaaatgcattacttgaattattctcgaataaactt 42326056  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  42326055 gatgttgttgaaaatgaattgttgttatgaaat 42326023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 3402761 - 3402991
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||||||  || ||||  |||||||| |||||||||||||||||  ||||||||||||    
T  3402761 cgagcacttccagaactaagtacttttgagaatgtcgtgacctgagttgaatgaattgagtaggaatgaaactttaggtagtaatgtgacctatttaaga 3402860  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | |  || |||| | ||| ||| ||||||  ||||||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||     
T  3402861 tgttaactgagacc--tgtgaagctattatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattccttgatttattcttgaataacctt 3402958  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| |||||||||||||| |||||||    
T  3402959 gatgttgttgaaaatgaattgttgtcatgaaat 3402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 26190814 - 26190925
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  26190814 cgagcacttccagaactgagtgcaattgagaatgtcatgacctgagttgcttggattgattaggaatggaactttaggtagtaatgagacctatttaaga 26190913  T
Q  101 tgttaactgaaa 112  Q
    ||||||||||||    
T  26190914 tgttaactgaaa 26190925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 20461306 - 20461523
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| ||| || || ||  ||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  20461306 cgagcacttccagaactgagtgcatttaaggattttgagacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaaga 20461405  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  20461406 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 20461503  T
Q  201 atgttgttgaa-atgaattg 219  Q
    | ||||||||| ||||||||    
T  20461504 aagttgttgaagatgaattg 20461523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 326970 - 327187
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| || ||  ||||||||||| |||||||| |||| || ||||| ||||||| |||||| ||||||||||||    
T  326970 cgagcacttccagaactgagtgcttttgaggattttgagacctgagttgcttggattgattagaaaaggaaccttaggtactaatgagacctatttaaga 327069  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  327070 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 327167  T
Q  201 atgttgttgaa-atgaattg 219  Q
    |  |||||||| ||||||||    
T  327168 aaattgttgaagatgaattg 327187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 11298407 - 11298562
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||| ||||||||||| | ||||  | ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  11298407 ttaggtagtaatgtgacctatttaagatattaactgaaatttgtgag--gctgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgca 11298503  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  11298504 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaaat 11298562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 12496495 - 12496352
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||  || ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  12496495 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtga--agctgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgca 12496399  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||| |||| |||||||||| ||||||||| |||||||||||    
T  12496398 ttacttgaaatattattgaatgatcaagatgttgtagaaatgaattg 12496352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 7793152 - 7793372
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggtta---ggaatggaactttaggtagtaatgaaacctattta 97  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| |||   |||| ||||||||||||| |||||| |||||||||    
T  7793152 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattattaggaaaggaactttaggtactaatgagacctattta 7793251  T
Q  98 agatgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatc 197  Q
    |||| |||||||| | |  || |||| | ||| ||| || ||| || || |||||||||||   |||| | |||||||||||||||||| ||||||||||    
T  7793252 agatattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttgttgattgattgcattacttgaattattattgaatgatc 7793349  T
Q  198 tagatgttgttgaa-atgaattg 219  Q
     ||| ||||||||| ||||||||    
T  7793350 aagaagttgttgaagatgaattg 7793372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 12037758 - 12037987
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||  ||||||||||  |||||||||||| ||| |||| ||  ||||||| |  |  |||| || |  | ||||||| ||    
T  12037758 cgagcacttccagaactgagtgcaattgagaatgtcgtgacctgagttgcttgaattgatttagaatggacccctgagtagcaacgtgatctatttagga 12037857  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||| | |||||||| ||| |   | ||  ||| |||||| ||| || ||||||||||||| |||||| ||||||||||||  |||| |||||||||| |    
T  12037858 tgtttaatgaaatctgtgaaaccatttt--gaaatgttaagttgattataatgtgatttaatgattaattgcattacttgagatattattgaatgatcaa 12037955  T
Q  200 gatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||||||||||||||||||||||||||    
T  12037956 gatgttgttgaaatgaattgttgttatgaaat 12037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 18383795 - 18383939
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||||||| |||  |||  || ||||| ||||||||||  || || ||||||||||||| |||||| ||||    
T  18383795 ttaggtagtaatgtgacctatttaagatgttaactgagatcagtga--agctgttatgaactgttaagctgattttaatgtgatttaatgattaattgca 18383892  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||| |||| |||||||||| |||||||| ||||||||||||    
T  18383893 ttacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 18383939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 11855028 - 11854813
Alignment:
Q  9 tccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaact 108  Q
    |||||||||||||| ||||||| |  ||  ||| ||||||| |||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  11855028 tccagaactgagtgtttttgaggagtttgagacttgagttgcttggattgtttaggaatggaactttaggtactaatgagacctatctaagatgttaact 11854929  T
Q  109 gaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgtt 208  Q
    |   |  ||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||| ||| ||    
T  11854928 g--ttaattgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttatt 11854831  T
Q  209 g-aaatgaattgttgtta 225  Q
    | |||||||||| |||||    
T  11854830 gaaaatgaattgatgtta 11854813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31097360 - 31097469
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||| ||||| || ||| | |||||||||||||||||||||||||||| ||||||||||||| || ||| |||||||||||    
T  31097360 cgagcacttccagaactgagtgcatttgaagattgtga-gacctgagttgtttggattggttaggaaaggaactttaggtactactgagacctatttaag 31097458  T
Q  100 atgttaactga 110  Q
    || ||||||||    
T  31097459 atattaactga 31097469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 4589037 - 4589134
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  4589037 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 4589134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 5223241 - 5223144
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  5223241 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 5223144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 12339643 - 12339546
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  12339643 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 12339546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 11300317 - 11300526
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||| ||||||| |||||||| ||||||||||||||||||||| |||||| |||||| |||||    
T  11300317 cgagcacatccagaattgagtgcttttgaggagtttgagacttgagttgcttggattgtttaggaatggaactttaggtactaatgagacctatctaaga 11300416  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||   |  |||  ||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  11300417 tgttaactg--ttaattgtaaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 11300514  T
Q  201 atgttgttgaaa 212  Q
    | ||| ||||||    
T  11300515 aagttattgaaa 11300526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15482962 - 15482754
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||| ||||||| |||||||| |||||||  |||| ||||||| |||||| ||||||||||||    
T  15482962 cgagcacttccagaactgagtgcatttgaggattttgagacttgagttgcttggattgattaggaaatgaac-ttaggtactaatgagacctatttaaga 15482864  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| ||||||| || ||    
T  15482863 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgctcaag 15482766  T
Q  201 atgttgttgaaa 212  Q
    |  |||||||||    
T  15482765 aaattgttgaaa 15482754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 30066249 - 30066056
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||||| |||||    
T  30066249 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaaga 30066150  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    |||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  30066149 tgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 30066056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 322829 - 322685
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||||| | |||| |||  || ||||| ||| ||||||  || || ||||||||||||| |||||| ||||    
T  322829 ttaggtagtaatgtgacctatttaagatgttaactaagatctgtga--agctgttatgaagtgttaagctgattataatgtgatttaatgattaattgca 322732  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||| |||| |||||||||| |||||||| ||||||||||||    
T  322731 ttacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 322685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 11070371 - 11070178
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||| ||||||| | |||||||||||| |  ||  ||||||||| ||||| ||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  11070371 cgagcacatccagaattaagtgcttttgaggaatttgagacctgagtcgtttg-attggattaggaatggaactttaggtactaatgagacctatctaag 11070273  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | ||||||||||||||||||||||||||||    
T  11070272 atgttaactg--ttatttgtgaagctatatcgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattcttgaatgat 11070178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 11300694 - 11300791
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  11300694 tgttatgaactgctaagttgtttgtaatttgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 11300791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 14499628 - 14499435
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||| || |||| |||||||||||||| |  ||  ||||||||| ||||| ||||| ||||||||| |||||||||||||||||| |||||| ||||    
T  14499628 cgagcacatctagaattgagtgcttttgaggaatttgagacctgagtcgtttg-attggattaggaatgaaactttaggtagtaatgagacctatctaag 14499530  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||||||||   | |||| |||| | |   ||| || ||||||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  14499529 atgttaactg--ttatttgtgaagctatattgaaatgctaattgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 14499435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 15465042 - 15464945
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| ||||||||| |||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  15465042 tgttatgaactgctaagttgtttgtagtgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 15464945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 19775610 - 19775513
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||| ||||||||||||    
T  19775610 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 19775513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2897629 - 2897838
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||| ||||| |||||| |  ||  ||||||||||| || ||||| |||||| |||||||||||||| || |||  |||||||||||    
T  2897629 cgagcacttccagaacttagtgcatttgaggagtttgagacctgagttgcttagattgattaggagtggaactttaggtaatagtgaggcctatttaaga 2897728  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||  | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | ||||||||| |||||||| |||||||||| ||    
T  2897729 tgttaactgttaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattactggaattattattgaatgatcaag 2897826  T
Q  201 atgttgttgaaa 212  Q
    | |||| |||||    
T  2897827 aagttgatgaaa 2897838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 229
Target Start/End: Complemental strand, 11863050 - 11862877
Alignment:
Q  55 attggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgt 153  Q
    |||| |||||| |||| | ||||||| |||||  |||||||||||||||||  |||||||| |||  || || || ||||||||||  || || | ||||    
T  11863050 attgattaggattggacccttaggtattaatgtgacctatttaagatgttatttgaaatctgtga--agctgctatgaactgttaagctgattatgatgt 11862953  T
Q  154 gatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||| |||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||||| | |||||||    
T  11862952 gatttaatgattaattgcattacttgaaatattattgaatgaccaagatgttgttgaaatgaattgatattatgaa 11862877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 74 - 228
Target Start/End: Original strand, 19725790 - 19725943
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||| ||||||||||| ||||||||||| ||| |   || || ||||||||||  || || ||||||||||||| |||||| | ||    
T  19725790 ttaggtagtaatgtgacccatttaagatgtcaactgaaatctgtgaaac--tgctatgaactgttaagctgattataatgtgatttaatgattaattaca 19725887  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatga 228  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| | ||||||    
T  19725888 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatga 19725943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 55023170 - 55022977
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| || | |||||||||||||||||| || |||||| |||||| |||||    
T  55023170 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttagatactaatgagacctatctaaga 55023071  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    |||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  55023070 tgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 55022977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 229
Target Start/End: Complemental strand, 11851804 - 11851665
Alignment:
Q  89 acctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgcattacttgaattattc 187  Q
    ||||||||||||||||| |||||||  ||| |||| || || ||||||||||  || || | ||||||||||| |||||| ||||||||||||| ||||     
T  11851804 acctatttaagatgttatctgaaat--ttgtgaagctgctatgaactgttaagctgattatgatgtgatttaatgattaattgcattacttgaaatatta 11851707  T
Q  188 ttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||| | ||||||||||||||||||||| | |||||||    
T  11851706 ttgaatgaacaagatgttgttgaaatgaattgatattatgaa 11851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 11165335 - 11165528
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||||| |||||    
T  11165335 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaaga 11165434  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    |||||||||  || | ||| |   | ||  ||| ||  || ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  11165435 tgttaactgttatttgtgaaactatatt--gaaatgccaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 11165528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38814684 - 38814584
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||| ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  38814684 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggtttggttaggaaaggaactttaggtactaatgcgacctattaaaga 38814585  T
Q  101 t 101  Q
    |    
T  38814584 t 38814584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 14665566 - 14665495
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  14665566 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 14665495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 856449 - 856335
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| ||| ||| |||| ||| |||| ||||| ||||| | |||||||||||||| |||||| |||||    
T  856449 cgagcacttccagaactgagtgcaagtgagaatgttgtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgagacctatataaga 856350  T
Q  101 tgttaactgaaatct 115  Q
     |||||||| |||||    
T  856349 agttaactgcaatct 856335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17242272 - 17242194
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| ||||||||||||    
T  17242272 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactttaggt 17242194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 14668722 - 14668651
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||| ||| |||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  14668722 taatatgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 14668651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3833974 - 3833873
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||  |||||||||||||| ||  |  |||||||| ||||||| ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  3833974 cgagcacttccagatttgagtgcttttgaggattgtgagacctgagctgtttggtttggttaggaaaggaactttaggtactaatgtgacctattaaaga 3833875  T
Q  101 tg 102  Q
    ||    
T  3833874 tg 3833873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15849891 - 15850109
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| ||||||||  ||  ||| | || |  |||||||| |||||| |||||||||||||| |||||| ||||||||||||    
T  15849891 cgagcacttccagaactgagtgcatttgagaagtttgagactttaggtacttggattgattaggattggaactttaggtactaatgagacctatttaaga 15849990  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | || | ||| |||   | |||| | ||| ||| || ||| || || || |||||| ||  |||| | ||||| |||||||||||| |||||||||| ||    
T  15849991 tatttaatgagatc--ggtgaagcttttatgaaatgctaaatgattatattgtgatatatggattgattgcataacttgaattattgttgaatgatcaag 15850088  T
Q  201 atgttgttgaaatgaattgtt 221  Q
    |  ||||  ||||||||||||    
T  15850089 aaattgtgaaaatgaattgtt 15850109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16864939 - 16865024
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatg 86  Q
    ||||||||||||||| |||||| ||| ||||||  |  |||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  16864939 cgagcacttccagaattgagtgttttagagaattgtgagacctgagatgtttggattggttaggaaaggaactttaggtactaatg 16865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16910063 - 16909885
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| ||||||||||||   ||||||||| |||| ||| |||| ||| |||| ||||| ||||| | |||||||||||||  ||||||  ||||    
T  16910063 cgagcacttctagaactgagtgcaagtgagaatgtcatgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgtgacctatacaaga 16909964  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttga 180  Q
    ||||||||| ||||  || |||| | ||| ||| |||||| ||| || ||||||||||||| |||||| |  |||||||||    
T  16909963 tgttaactgcaatc--tgtgaagcttttatgaattgttaagttgattataatgtgatttaatgattaattttattacttga 16909885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15941710 - 15941804
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatt 95  Q
    |||||||||||||||||||||||||||||| ||     ||| |||| |||||||||||||||| || ||||||||||||  |||||| |||||||    
T  15941710 cgagcacttccagaactgagtgcttttgaggattgagagacttgagctgtttggattggttagaaaaggaactttaggtgctaatgagacctatt 15941804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16797860 - 16797969
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||| ||||  || ||| | | |||||||||||||||||| ||||||| |||||| |||||| ||||| |||||||| |||    
T  16797860 cgagcacttccagaactgagtgcatttgttgattgtgagg-cctgagttgtttggattgattaggaaaggaactataggtactaatggaacctattaaag 16797958  T
Q  100 atgttaactga 110  Q
    || || |||||    
T  16797959 atattgactga 16797969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16808687 - 16808796
Alignment:
Q  1 cgagcacttccagaactgagtgcttttga-gaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||||||||||||||||||| ||||  || ||| | | ||||||||||||| |||| ||||||| |||||| |||||| ||||| |||||||| |||    
T  16808687 cgagcacttccagaactgagtgcatttgttgattgtgagg-cctgagttgtttgtattgattaggaaaggaactataggtactaatggaacctattaaag 16808785  T
Q  100 atgttaactga 110  Q
    || || |||||    
T  16808786 atattgactga 16808796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 37439900 - 37439969
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  37439900 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 37439969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 4111209 - 4111276
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  4111209 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 4111276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 15965118 - 15965051
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  15965118 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 15965051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 15969042 - 15968975
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  15969042 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 15968975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 15972966 - 15972899
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  15972966 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 15972899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 16750548 - 16750615
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  16750548 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 16750615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 19775914 - 19775847
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  19775914 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 19775847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 37439596 - 37439663
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  37439596 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 37439663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 7109862 - 7109792
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  7109862 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 7109792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 7113797 - 7113727
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  7113797 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 7113727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 22321828 - 22321758
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  22321828 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 22321758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 22336883 - 22336813
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  22336883 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 22336813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 27409589 - 27409659
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  27409589 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 27409659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 28949888 - 28949818
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  28949888 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 28949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 8489425 - 8489497
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattat--tcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||||||||  |||||||||||| || ||| |||  | |||||||||| |||||||||||||||||||||||    
T  8489425 tgtgatttaattattaaatgcattgctcgaaatatattattgaatgatcaagatgttgttgaaatgaattgtt 8489497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16369721 - 16369543
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||  |||  || |||| ||| |||| ||||| ||  | | |||||||||||||  | |||| |||||    
T  16369721 cgagcacttccagaactgagtgcaagtgagaatgtcgtgatatgtgttgcttgaattgattagggatacacccttaggtagtaatgtgatctatataaga 16369622  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttga 180  Q
    ||||||||  ||  | || |||| ||||| |||||||||| ||| || |||||||||||||  ||||| | ||||||||||    
T  16369621 tgttaactccaa--tatgtgaagctgttatgaactgttaagttgattataatgtgatttaatcattaatttcattacttga 16369543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 4107357 - 4107424
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||| ||||| |||| |||||||||| |||   |||||||||||||||||    
T  4107357 tgtgaattaatgattaaatgcattagttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 4107424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 15964797 - 15964745
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  15964797 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 15964745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 15968721 - 15968669
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  15968721 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 15968669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 15972645 - 15972593
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  15972645 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 15972593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 15051775 - 15051655
Alignment:
Q  55 attggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgt 153  Q
    |||| ||||| ||||| | |||||||||| ||  |||||| |||||||||||||| ||  |||| |||| | ||| |||||||||| ||| || ||||||    
T  15051775 attgattagggatggacccttaggtagtattgtgacctatataagatgttaactgcaa--tttgtgaagctattatgaactgttaagttgattataatgt 15051678  T
Q  154 gatttaacgattaaatgcattac 176  Q
    ||||||| |||||| | ||||||    
T  15051677 gatttaatgattaatttcattac 15051655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 15060551 - 15060427
Alignment:
Q  55 attggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgt 153  Q
    |||| ||||| ||||| | |||||||||| ||  |||||| ||||||| |||||| ||||| |||  || | ||| |||||||||| ||| || ||||||    
T  15060551 attgattagggatggacccttaggtagtattgtgacctatataagatggtaactgcaatctgtga--agctattatgaactgttaagttgattataatgt 15060454  T
Q  154 gatttaacgattaaatgcattacttga 180  Q
    ||||||| |||||| | ||||||||||    
T  15060453 gatttaatgattaatttcattacttga 15060427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16690519 - 16690441
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||||| |||||| ||| | | ||  |  |||||||||||||||||||||||| ||| |||||||||||||    
T  16690519 cgagcacttccagaagtgagtgttttagtggatcgtgagacctgagttgtttggattggtta-gaaaggaactttaggta 16690441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16697092 - 16697014
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||||| |||||| ||| | | ||  |  |||||||||||||||||||||||| ||| |||||||||||||    
T  16697092 cgagcacttccagaagtgagtgttttagtggatcgtgagacctgagttgtttggattggtta-gaaaggaactttaggta 16697014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1598286 - 1598364
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||     ||| |||| ||||||||||| |||| || || |||||||||    
T  1598286 cgagcacttccagaactgagtgcttttgaggattgagagacttgagctgtttggattgattagaaaagggactttaggt 1598364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 24222188 - 24221951
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| ||||||||| || ||  ||||||||||||  || ||||  |||||||||||| |||||||||||||||||||||||||||    
T  24222188 cgagcacttccagaactgaatgcttttgataaggtcgtgacctgagttgaatgaattgagtaggaatggaacattaggtagtaatgaaacctatttaaga 24222089  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
     |||| | | ||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  24222088 cgttagccggaatctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacta 24221991  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  24221990 gatgttgttgaaatgaattgttgttatgaaattatgatgt 24221951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 12028371 - 12028600
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||  || |||| ||||||||||| | |||||||||||||||||||||||||||    
T  12028371 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaatgaaacctatttaaga 12028469  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||     
T  12028470 tgttaactgagacctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattctcgaataaactt 12028567  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  12028568 gatgttgttgaaaatgaattgttgttatgaaat 12028600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22757436 - 22757207
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||  || |||| ||||||||||| | |||||||||  ||||||||||||||||    
T  22757436 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagttgtgaaacctatttaaga 22757338  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||     
T  22757337 tgttaactgagacctgtga--agttgttaagaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattattgaataaactt 22757240  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  22757239 gatgttgttgaaaatgaattgttgttatgaaat 22757207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 17918957 - 17919186
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  17918957 cgagcacttccagaactgagtgcttttgataatgtcgtgacctgagttgtttggattggttaggaatgaaactttaggtagtaaggaaacctatttaata 17919056  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||| | |||  ||| |||||   ||||| ||| |||||| |  |||||||||||||||| ||||||||||||||||||| |||||||||||| | || |    
T  17919057 tgttgagtgaggtctgtgaga--ctgttatgaattgttaagttgttgtaatgtgatttaaagattaaatgcattacttgatttattcttgaataaccttg 17919154  T
Q  201 atgttgttg-aaatgaattgttgttatgaaat 231  Q
    ||||||||| ||||||||||||||||||||||    
T  17919155 atgttgttgaaaatgaattgttgttatgaaat 17919186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 23451655 - 23451431
Alignment:
Q  3 agcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatg 102  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  23451655 agcacttccagaactgagtgcatttgagaatgttgagacctgagttgtttgaattgattaggaatggaactttaggtagtagtgagacctatttaagatg 23451556  T
Q  103 ttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctaga 201  Q
    ||||||||||||| ||||  | ||||  |||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||   ||    
T  23451555 ttaactgaaatctgtgag--gctgtt-tgaactgctaagttgtttgtaaagtgatttaacgattaaatgcattacttgaaatattattgaatgattatga 23451459  T
Q  202 tgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||| |||||| |||||||||    
T  23451458 tgttgttgaaaagaattgatgttatgaa 23451431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 23463160 - 23462936
Alignment:
Q  3 agcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatg 102  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  23463160 agcacttccagaactgagtgcatttgagaatgttgagacctgagttgtttgaattgattaggaatggaactttaggtagtagtgagacctatttaagatg 23463061  T
Q  103 ttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctaga 201  Q
    ||||||||||||| ||||  | ||||  |||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||   ||    
T  23463060 ttaactgaaatctgtgag--gctgtt-tgaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattattgaatgattatga 23462964  T
Q  202 tgttgttgaaatgaattgttgttatgaa 229  Q
    || |||||||| |||||| |||||||||    
T  23462963 tgctgttgaaaagaattgctgttatgaa 23462936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 26680890 - 26680657
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  26680890 cgagcacttccagaactgagtgcttttgataatttcgtgacctgagttgtttggattgattaggaatgg-acattaggtagtaatgaaacctatttaaga 26680792  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat-gatcta 199  Q
    |||||||||| |   ||| |||||||||||||||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||     
T  26680791 tgttaactgaga--cttgtgaagttgttaagaac--taagttgtttgtaatgtgatttaacgatcaaatgcattacttgaattattcttgaataaacctt 26680696  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatg 238  Q
    |||||| |||||||||||||||  |||||||| ||||||    
T  26680695 gatgttattgaaatgaattgttactatgaaattatgatg 26680657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 26952497 - 26952264
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  26952497 cgagcacttccagaactgagtgcttttgataatttcgtgacctgagttgtttggattgattaggaatgg-acattaggtagtaatgaaacctatttaaga 26952399  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat-gatcta 199  Q
    |||||||||| |   ||| |||||||||||||||  | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||     
T  26952398 tgttaactgaga--cttgtgaagttgttaagaac--taagttgtttgtaatgtgatttaacgatcaaatgcattacttgaattattcttgaataaacctt 26952303  T
Q  200 gatgttgttgaaatgaattgttgttatgaaatgatgatg 238  Q
    |||||| |||||||||||||||  |||||||| ||||||    
T  26952302 gatgttattgaaatgaattgttactatgaaattatgatg 26952264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 23458899 - 23458675
Alignment:
Q  3 agcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatg 102  Q
    |||||||| |||||||||||| ||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  23458899 agcacttcaagaactgagtgcatttgagaatgttgagacctgagttgtttgaattgattaggaatggaactttaggtagtagtgagacctatttaagatg 23458800  T
Q  103 ttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctaga 201  Q
    ||||||||||||| ||||  | ||||  |||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||   ||    
T  23458799 ttaactgaaatctgtgag--gctgtt-tgaactgctaagttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattattgaatgattatga 23458703  T
Q  202 tgttgttgaaatgaattgttgttatgaa 229  Q
    || |||||||| |||||| |||||||||    
T  23458702 tgctgttgaaaagaattgctgttatgaa 23458675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 123111 - 123340
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| ||||||||||||  |||||  | ||||||||||||||||||||||||||||||||| ||||||||||||   |||||| | |||    
T  123111 cgagcacttccagaattgagtgcttttgttaatgtcgtaacctgagttgtttggattggttaggaatggaaccttaggtagtaatatgacctatgtgaga 123210  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||| |||| ||||  | ||||| ||| ||||||    |||||||||||||||| |||||||||||||||||||||||||||||||| |  | |    
T  123211 tgttaactgagatctgtgag--gctgttatgaattgttaagctgttgtaatgtgatttaaagattaaatgcattacttgaattattcttgaataactttg 123308  T
Q  201 atgttgttg-aaatgaattgttgttatgaaat 231  Q
    ||||||||| |||||||||||||| |||||||    
T  123309 atgttgttgaaaatgaattgttgtgatgaaat 123340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1858782 - 1859010
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||||||||  |||| ||||||| ||| |||| |||||| |||||||| |||||||| ||| || |||||||||    
T  1858782 cgagcacttccagaactgagtgcatttgagaatgtcgtgacttgagttgattgaattgattaggattggaactt-aggtagtagtgagacatatttaaga 1858880  T
Q  101 tgttaactgaaa-tctttgagaagttgttaagaactgttaattgt---ttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    |||||| ||||| ||| ||||  | ||||  |||||  |||||||   ||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  1858881 tgttaattgaaaatctgtgag--gctgttt-gaactactaattgttgtttgtaatgtgatttaacgattaaatgcattacttgaaatattattgaatgat 1858977  T
Q  197 ctagatgttgttgaaatgaattgttgttatgaa 229  Q
       ||||||||||||||||||||||||||||||    
T  1858978 tatgatgttgttgaaatgaattgttgttatgaa 1859010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 20805788 - 20805634
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||  | ||||  |||||| ||| || || |||||||||||||| |||||||||||    
T  20805788 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgag--gctgttt-gaactgctaagttattggtaatgtgatttaatgattaaatgca 20805692  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||| | || |||||||||||||||||||||| ||||||||| | |||||||||    
T  20805691 ttacttgaaatgttattgaatgatctagatgttgttg-aatgaattgatattatgaaat 20805634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 21366544 - 21366688
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||||||| |||| |||  || || || ||||||||||  || || ||||||||||||| |||||| ||||    
T  21366544 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtga--agctgctatgaactgttaagctgattataatgtgatttaatgattaattgca 21366641  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||| |||| |||||||||| |||||||| ||||||||||||    
T  21366642 ttacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 21366688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 229
Target Start/End: Complemental strand, 20767207 - 20767058
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcatta 175  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||  | ||||  |||||  ||| ||||| |||||||||||||| ||||||||||||||    
T  20767207 ggtagtaatgtgacctatttaagatgttaactgaaatctgtgag--gctgttt-gaactactaagttgttggtaatgtgatttaatgattaaatgcatta 20767111  T
Q  176 cttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||| | || |||||||||||||||||||||| ||||||||| | |||||||    
T  20767110 cttgaaatgttattgaatgatctagatgttgttg-aatgaattgatattatgaa 20767058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 18356134 - 18356037
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  18356134 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 18356037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 20911099 - 20911196
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  20911099 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 20911196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31342417 - 31342215
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| || |||||| || ||  ||||||||||||  || |||| ||||||||||| | ||||||||||| |||||||||||||||    
T  31342417 cgagcacttccagaactgaatgtttttgataacgtcgtgacctgagttgaatgaattgattaggaatgga-cattaggtagtaaggaaacctatttaaga 31342319  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||| | |||   |||||||||                 |||||||||||||||||||||| ||||||||||||||||| ||||||| | || |    
T  31342318 tgttaactgagacctt---gaagttgtt-----------------tgtaatgtgatttaacgattaattgcattacttgaattatccttgaataaacttg 31342239  T
Q  201 atgttgttg-aaatgaattgttgt 223  Q
    ||||||||| ||||||||||||||    
T  31342238 atgttgttgaaaatgaattgttgt 31342215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 10753208 - 10753109
Alignment:
Q  123 gttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||| ||||||||||||    
T  10753208 gttgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 10753109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18356627 - 18356518
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| ||||||  ||||| |||| || |||||| ||||||||||||    
T  18356627 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggagaggaaccttagatactaatgagacctatttaaga 18356528  T
Q  101 tgttaactga 110  Q
    ||||||||||    
T  18356527 tgttaactga 18356518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 20232850 - 20232741
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||||||| |||||| | ||||||||||| |||| | ||||||||||||    
T  20232850 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggattgggtaggaaagaaactttaggtactaataagacctatttaaga 20232751  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  20232750 tattgactga 20232741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20910606 - 20910715
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| ||||||  |||||  |||||| |||||| ||||||||||||    
T  20910606 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggagaggaaccctaggtactaatgagacctatttaaga 20910705  T
Q  101 tgttaactga 110  Q
    ||||| ||||    
T  20910706 tgttatctga 20910715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17410747 - 17410647
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||  ||||| || ||   |||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  17410747 cgagcacttccagaactgagtgcacttgaggattttgatacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaaga 17410648  T
Q  101 t 101  Q
    |    
T  17410647 t 17410647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33409528 - 33409428
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||| ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  33409528 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggtttggttaggaaaggaactttaggtactaatgtgacctattaaaga 33409429  T
Q  101 t 101  Q
    |    
T  33409428 t 33409428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 24767497 - 24767568
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  24767497 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 24767568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 15236586 - 15236779
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattgg-ttaggaatggaactttaggtagtaatgaaacctatttaag 99  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| ||||| ||||||||||||| || |||| |||||| |||||| ||||    
T  15236586 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttg-attggattaggaatggaacctttggtactaatgagacctatctaag 15236684  T
Q  100 atgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||   ||| | ||||||||||||||||||||||||||||    
T  15236685 atgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattaattgattgcattacttgaattattcttgaatgat 15236779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16674452 - 16674352
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||| |||||||||||  |||||||||||| |||||  ||||||| ||||    
T  16674452 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggtttggttaggaaacgaactttaggtactaatgtgacctattaaaga 16674353  T
Q  101 t 101  Q
    |    
T  16674352 t 16674352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21340573 - 21340651
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||  |||||||||||||||||| ||||||||||||    
T  21340573 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagcagtttggattggttaggaaaggaactttaggt 21340651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26665937 - 26666015
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| |||||| |||||    
T  26665937 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactctaggt 26666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26937534 - 26937612
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| |||||| |||||    
T  26937534 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactctaggt 26937612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 23572390 - 23572285
Alignment:
Q  4 gcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgt 103  Q
    ||||||||||||||||||||   |||||||||| ||| || ||||| ||| |||| ||||| ||||| | |||||||||||||| |||||| ||||| ||    
T  23572390 gcacttccagaactgagtgcaagtgagaatgttgtgatctaagttgcttgaattgattagggatggacccttaggtagtaatgagacctatataagaagt 23572291  T
Q  104 taactg 109  Q
    ||||||    
T  23572290 taactg 23572285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 26742562 - 26742630
Alignment:
Q  11 cagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||| ||  |  |||||||||||||||||||||||||||| ||||||||||||    
T  26742562 cagaactgagtgcttttgaggattgtgagacctgagttgtttggattggttaggaaaggaactttaggt 26742630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 18769809 - 18769923
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||| ||   |||||||||  ||| ||| |||| ||| |||| ||||| ||||| | |||||||||||||| |||||| |||||    
T  18769809 cgagcacttccagaactgagcgcaagtgagaatgtagtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgagacctatataaga 18769908  T
Q  101 tgttaactgaaatct 115  Q
     |||||||| |||||    
T  18769909 agttaactgcaatct 18769923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22032630 - 22032516
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| |||  || |||| ||| |||| ||||  ||||| | |||||||||||||| |||||| |||||    
T  22032630 cgagcacttccagaactgagtgcaagtgagaatgttgtgatatgtgttgcttgaattgattagagatggacccttaggtagtaatgagacctatataaga 22032531  T
Q  101 tgttaactgaaatct 115  Q
     |||||||| |||||    
T  22032530 agttaactgcaatct 22032516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42805720 - 42805642
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||  |  | |||||||||||| ||| ||||||||| ||||||||||||    
T  42805720 cgagcacttccagaactgagtgcttttgaggattgtgaggcctgagttgttttgataggttaggaaaggaactttaggt 42805642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23535395 - 23535500
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| ||| || ||  |  ||||||||||| |||| ||| ||||||| ||||| ||||||| |||||| |||| |||||||    
T  23535395 cgagcacttccagaactgagtgcattttaggattgtgagacctgagttgcttggtttgattaggaaaggaaccttaggtactaatgagacctgtttaaga 23535494  T
Q  101 tgttaa 106  Q
    | ||||    
T  23535495 tattaa 23535500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17718245 - 17718345
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| |||||||||| ||  |  ||| |||| ||||||| |||||||| |  ||||||||||||| |||||| ||||||| ||||    
T  17718245 cgagcacttccagaactgaatgcttttgaggattgtgagacttgagatgtttggtttggttagaagaggaactttaggtactaatgagacctattaaaga 17718344  T
Q  101 t 101  Q
    |    
T  17718345 t 17718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25229212 - 25229304
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||| |||| || ||  |  ||| ||||||||||||||| |||||||| ||||||||||||  |||||| |||||    
T  25229212 cgagcacttccagaactgagtgttttttaggattgtgagacttgagttgtttggattagttaggaaaggaactttaggtgctaatgagaccta 25229304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25293368 - 25293460
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||| |||| || ||  |  ||| ||||||||||||||| |||||||| ||||||||||||  |||||| |||||    
T  25293368 cgagcacttccagaactgagtgttttttaggattgtgagacttgagttgtttggattagttaggaaaggaactttaggtgctaatgagaccta 25293460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24532854 - 24532932
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||  ||||||||||||||||||| ||  |  |||||||| ||||||||||||||||||| |||||| |||||    
T  24532854 cgagcacttttagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttaggaaaggaactctaggt 24532932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4036520 - 4036428
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||| |||| || ||  |  ||| || |||||||||||| |||||||| ||||||||||||  |||||| |||||    
T  4036520 cgagcacttccagaactgagtgttttttaggattgtgagacttgggttgtttggattagttaggaaaggaactttaggtgctaatgagaccta 4036428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 10753510 - 10753443
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  10753510 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 10753443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 20296008 - 20295938
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  20296008 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 20295938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 11220590 - 11220521
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  11220590 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 11220521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 11228999 - 11228930
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  11228999 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 11228930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 11230988 - 11230919
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  11230988 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 11230919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 40723851 - 40723904
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattact 177  Q
    ||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  40723851 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattact 40723904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 11226992 - 11226940
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  11226992 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 11226940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 17410595 - 17410523
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaa-atgaattg 219  Q
    ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||| ||||| ||| ||||||||    
T  17410595 taatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttgtcgaagatgaattg 17410523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21884995 - 21885073
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||||| |||||| ||| | | ||  |  |||||||||||||||||||||||| ||| |||||||||||||    
T  21884995 cgagcacttccagaattgagtgttttagtggattgtgagacctgagttgtttggattggtta-gaaaggaactttaggta 21885073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26172764 - 26172686
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||||| |||||| ||| | | ||  |  |||||||||||||||||||||||| ||| |||||||||||||    
T  26172764 cgagcacttccagaattgagtgttttagtggattgtgagacctgagttgtttggattggtta-gaaaggaactttaggta 26172686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 11225176 - 11225114
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattatt 186  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| ||||    
T  11225176 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatatt 11225114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 19472665 - 19472735
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||| ||||||| ||||||||||  || ||||||||||    
T  19472665 tgtttataatgtgatttattgattgattgcattacttaaattattattgaatgatcaggaagttgttgaaa 19472735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 23535560 - 23535610
Alignment:
Q  169 tgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||||||||| ||||||| |||||||||| |||  ||||||||||||||||    
T  23535560 tgcattactttaattattattgaatgatcaagaaattgttgaaatgaattg 23535610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 8871 - 8642
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||| |||||||||||||||||||||| |||||  ||||||||||||  || |||||||||||||||| | |||||||||||||||||||||||||||    
T  8871 cgagcatttccagaactgagtgcttttgataatgtcgtgacctgagttgaatgaattggttaggaatgga-cattaggtagtaatgaaacctatttaaga 8773  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||     
T  8772 tgttaactgagacctgtga--agttgttaagaactgttaagttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaactt 8675  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  8674 gatgttgttgaaaatgaattgttgttatgaaat 8642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 2241 - 2479
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | |||    
T  2241 cgagcacttccagaaccgagtgctttagagaatgttatgacctgagttgtttgaattggttaggaatgggactttaggtagtaatgaaacctatcttaga 2340  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat-ct 198  Q
    ||||||||| ||||  || |||| ||||| ||| ||||||  ||||||||||||||||||| |||||||| |||||||||| |||||||||||| || ||    
T  2341 tgttaactggaatc--tgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatacattacttgatttattcttgaataatcct 2438  T
Q  199 agatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
     |||||||||||| ||||||||||||||||||| |||||||    
T  2439 tgatgttgttgaattgaattgttgttatgaaattatgatgt 2479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10101 - 10339
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | |||    
T  10101 cgagcacttccagaaccgagtgctttagagaatgttatgacctgagttgtttgaattggttaggaatgggactttaggtagtaatgaaacctatcttaga 10200  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat-ct 198  Q
    ||||||||| ||||  || |||| ||||| ||| ||||||  ||||||||||||||||||| |||||||| |||||||||| |||||||||||| || ||    
T  10201 tgttaactggaatc--tgtgaagctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatacattacttgatttattcttgaataatcct 10298  T
Q  199 agatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
     |||||||||||| ||||||||||||||||||| |||||||    
T  10299 tgatgttgttgaattgaattgttgttatgaaattatgatgt 10339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 11680 - 11460
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  11680 cgagcacttccataactgagtgcttttgataatgtcgtgacctgagttgtttggattggttaggaatggaactttatgtagtaaggaaacctatttaaga 11581  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    ||||||||| ||||  || |||| |||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |    
T  11580 tgttaactggaatc--tgtgaagctgttaag---------ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaataaacttg 11492  T
Q  201 atgttgttg-aaatgaattgttgttatgaaat 231  Q
    ||||||||| ||||||||||||||||||||||    
T  11491 atgttgttgaaaatgaattgttgttatgaaat 11460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 2325 - 2250
Alignment:
Q  157 ttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttg-aaatgaattgttgttatgaaat 231  Q
    ||||||||||||||||||||||||||||||||||||| | || |||||||||| ||||||||||||||||||||||    
T  2325 ttaacgattaaatgcattacttgaattattcttgaataaacttgatgttgttgaaaatgaattgttgttatgaaat 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 22010484 - 22010707
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||||| | | || |||||||||    
T  22010484 cgagcacttccagaactgagtgcaattgagaatgttgtgacctgagttgcttgaattgattaggaatggaactttaggtagtagtaagacatatttaaga 22010583  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||||||||| ||||  ||||||  |||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  22010584 tgttaactgaaatctgtgag--gttgtt-tgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattcttgaatgatcta 22010680  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||   |||||||||||||||||||||||||    
T  22010681 ga---tgttgaaatgaattgttgttatgaa 22010707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 16861132 - 16861360
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||| ||| || | |||||||||||||||||||||||| ||| || |||||||||    
T  16861132 cgagcacttccagaactgagtgcatttgagaatgtcgtgacctgagttgattgaatcgattaggaatggaactttaggtagtagtgagacatatttaaga 16861231  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
     |||| ||||||||| | ||  | ||||  |||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||  |    
T  16861232 ggttagctgaaatctgtaag--gctgttt-gaactgttaagttgtttgtaatgtgatttaatgattaaatacattacttgaaatattattgaatgattaa 16861328  T
Q  200 gatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||||||||||||||||||||||||||    
T  16861329 gatgttgttgaaatgaattgttgttatgaaat 16861360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 20856230 - 20856458
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||||| ||   |||||||||||| ||| |||| |||||||||||| || |||||||||||  ||||||| ||||    
T  20856230 cgagcacttccagaactgagtgcttttgagattgccgtgacctgagttgattgaattgattaggaatggaaattcaggtagtaatgtgacctattaaaga 20856329  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||| |||| |||| |||  |  ||||| ||| || |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||    
T  20856330 tgttagctgagatctgtga--acctgttatgaattgctaagctgtttgtaatgtgatttaatgattaaatgcattacttgaattattcttgaataaccta 20856427  T
Q  200 gatgttgttg-aaatgaattgttgttatgaa 229  Q
    |||||||||| ||||||||||||||||||||    
T  20856428 gatgttgttgaaaatgaattgttgttatgaa 20856458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 39094747 - 39094957
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||  || ||||  ||| |||||||||| |||||||||||  ||||||||||||    
T  39094747 cgagcacttccagaactgagtgcttttgagaatgtcgtgacctgagttgaatgaattgagtagaaatggaacttaaggtagtaatgtgacctatttaaga 39094846  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||| ||          ||||||||         ||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | || |    
T  39094847 tgttaactgagat----------ttgttaag---------ttgtttgtaatgtaatttaatgattaaatgcattacttgatttattcttgaataaccttg 39094927  T
Q  201 atgttgttg-aaatgaattgttgttatgaa 229  Q
    ||||||||| |||||||||||| |||||||    
T  39094928 atgttgttgaaaatgaattgttattatgaa 39094957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 74 - 229
Target Start/End: Original strand, 30643169 - 30643324
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||||||||||| ||||| ||| ||| ||||| |||||||||| ||| || |||| |||||||| |||||| ||||    
T  30643169 ttaggtagtaatgtgacctatttaagatgttaactgcaatctgtga-aagctgttacgaactgttaagttgattataatatgatttaatgattaattgca 30643267  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||    
T  30643268 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaa 30643324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 16410133 - 16410288
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||| ||||||||||| | ||||  | ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  16410133 ttaggtagtaatgtgacctatttaagatattaactgaaatatgtgag--gctgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgca 16410229  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  16410230 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattggtattatgaaat 16410288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 17926585 - 17926728
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||| |||||||| |||  || ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  17926585 ttaggtagtaatgtgacctatttaagatgttaattgaaatctgtga--agctgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgca 17926681  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||| |||| |||||||||| |||||||||||||||||||||    
T  17926682 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 17926728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 20465844 - 20466071
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||  ||  ||| |||| ||| |||| ||||| | ||| | |||||||||||||  |||||| |||||    
T  20465844 cgagcacttccagaactgagtgcaagtgagaatgtcgtgttctgtgttgcttgaattgattagggacggacccttaggtagtaatgtgacctatataaga 20465943  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
     |||||||| ||||| |||  || ||||| ||| || ||| ||| || ||||||||||||| |||||| ||||||||||||| |||| |||||||||| |    
T  20465944 ggttaactgcaatctgtga--agctgttatgaaatgctaagttgattataatgtgatttaatgattaattgcattacttgaaatattattgaatgatcaa 20466041  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||||||||||||||| | |||||||    
T  20466042 gatgttgttgaaatgaattgatattatgaa 20466071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 15602899 - 15603051
Alignment:
Q  78 gtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattac 176  Q
    |||||||||  ||||||||||||||||||||||||||| |||  || ||||   ||||| ||| |||| ||||||||||||||| |||||||||||||||    
T  15602899 gtagtaatgtgacctatttaagatgttaactgaaatctgtga--agctgtttgaaactgctaagttgtctgtaatgtgatttaatgattaaatgcattac 15602996  T
Q  177 ttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||| |||| |||||||||| ||||||||||||||||||| | | |||||||||    
T  15602997 ttgaaatattattgaatgatcaagatgttgttgaaatgaatcgatattatgaaat 15603051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 15611351 - 15611503
Alignment:
Q  78 gtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattac 176  Q
    |||||||||  ||||||||||||||||||||||||||| |||  || ||||   ||||  ||| |||| ||||||||||||||| |||||||||||||||    
T  15611351 gtagtaatgtgacctatttaagatgttaactgaaatctgtga--agctgtttgaaactactaagttgtctgtaatgtgatttaatgattaaatgcattac 15611448  T
Q  177 ttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  15611449 ttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaaat 15611503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23834473 - 23834364
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| ||  |  |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||    
T  23834473 cgagcacttccagaactgagtgcatttgaggattgtgagacctgagttgtttggattggttaggaaaggaactttaggtactaatgagacctattaaaga 23834374  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  23834373 tattgactga 23834364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 30308560 - 30308754
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||| |||||||||| ||||||||||||  |||||| ||||||| ||||    
T  30308560 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggaatggttaggaaaggaactttaggtgctaatgagacctattaaaga 30308659  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatc 197  Q
    | || ||||| | || |  |||| | ||||||| |||||| || || | | |||| |||  |||| | || ||||||||||||||| ||||||||||    
T  30308660 tattgactgagaactct--gaagcttttaagaattgttaagtgattatgaagtgaattatggattgattgtattacttgaattattgttgaatgatc 30308754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 377592 - 377414
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||  |||||||||  ||| ||| |||| ||| |||| ||||| ||||| | |||||||||||||  |||||| |||||    
T  377592 cgagcacttccagaactgagtgctaatgagaatgtcgtgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgtgacctatataaga 377493  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttga 180  Q
    ||||||||| ||||  || |||| ||||| ||| ||||||  || |  ||||||||||||| |||||| ||||||||||||    
T  377492 tgttaactgcaatc--tgtgaagctgttatgaaatgttaagctgatcataatgtgatttaatgattaattgcattacttga 377414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 14398037 - 14398134
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  14398037 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagttgttgttgaaatgaattgtt 14398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16231281 - 16231501
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||| ||||||||| |||||||||||||| || |||||||||| |||||| ||||||| ||||    
T  16231281 cgagcacttccagaactgagtgcatttgaggattttgagacttgagttgttcggattggttaggaaagggactttaggtactaatgagacctattaaaga 16231380  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatcta 199  Q
    | || ||||| | |  || |||| | ||| ||| |||||| ||  | ||| |||| |||  |||| | |||| |||||||||||||| |||||||||| |    
T  16231381 tattgactgagaac--tgtgaagcttttatgaaatgttaagtgaatataaagtgaattatggattgattgcatttacttgaattattattgaatgatcaa 16231478  T
Q  200 gatgttgttg-aaatgaattgtt 221  Q
    ||  |||||| ||||||||||||    
T  16231479 gaatttgttgaaaatgaattgtt 16231501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18619778 - 18619669
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||| |||||||||| ||||| ||||||  |||||| ||||||| ||||    
T  18619778 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggaatggttaggaaaggaaccttaggtgctaatgagacctattaaaga 18619679  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  18619678 tattgactga 18619669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22028857 - 22028757
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| ||  |  ||||||||||||| |||||||||||||| ||||||||| ||| |||||| ||||||| ||||    
T  22028857 cgagcacttccagaactgagtgcatttgaggattgtgagacctgagttgttcggattggttaggaaaggaactttaagtactaatgagacctattgaaga 22028758  T
Q  101 t 101  Q
    |    
T  22028757 t 22028757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15532188 - 15532094
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatt 95  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| |||||||||||||||| || ||||||||||||  |||||| |||||||    
T  15532188 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttagaaaaggaactttaggtgctaatgagacctatt 15532094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15538748 - 15538654
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatt 95  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| |||||||||||||||| || ||||||||||||  |||||| |||||||    
T  15538748 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttagaaaaggaactttaggtgctaatgagacctatt 15538654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23846821 - 23846921
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| |||||| ||| ||| ||  |  ||||||||| |||||||||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  23846821 cgagcacttccagaattgagtgttttagaggattgtgagacctgagtggtttggattggttaggaaaggaactttaggtactaatgtgacctattaaaga 23846920  T
Q  101 t 101  Q
    |    
T  23846921 t 23846921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24434043 - 24434121
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||||||||||||||||||||||| ||     ||| |||| |||||||||||||||| || ||||||||||||    
T  24434043 cgagcacttccagaactgagtgcttttgaggattgagagacttgagctgtttggattggttagaaaaggaactttaggt 24434121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 21410792 - 21410723
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  21410792 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 21410723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 21805284 - 21805215
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  21805284 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 21805215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 18862605 - 18862672
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  18862605 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 18862672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 21383801 - 21383733
Alignment:
Q  153 tgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    |||||||| ||||||||||||| || ||| || | |||||||||  |||||||||||||||||||||||    
T  21383801 tgatttaatgattaaatgcattgctcgaaatagtattgaatgattaagatgttgttgaaatgaattgtt 21383733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 21827974 - 21828041
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  21827974 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 22045146 - 22045075
Alignment:
Q  39 gacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactga 110  Q
    |||||||||||||||| |||||||||||  ||||||||| || |||||| ||||||| ||||| || |||||    
T  22045146 gacctgagttgtttggtttggttaggaaatgaactttagatactaatgagacctattaaagatattgactga 22045075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 19259446 - 19259565
Alignment:
Q  60 ttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgattt 158  Q
    ||||| ||||| | |||||||||||||  ||||||  ||||||||||||| ||||  || |||| | ||| |||||||||| ||| || |||||||||||    
T  19259446 ttagggatggacccttaggtagtaatgtgacctatacaagatgttaactgcaatc--tgtgaagctattatgaactgttaagttgattataatgtgattt 19259543  T
Q  159 aacgattaaatgcattacttga 180  Q
    || |||||| | ||||||||||    
T  19259544 aatgattaatttcattacttga 19259565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 19278228 - 19278298
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  19278228 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 19278298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 21387223 - 21387153
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    |||||||||| |||||||||||||  | ||| || | | |||||||| |||||||||||||||||||||||    
T  21387223 tgtgatttaatgattaaatgcattgttcgaaatagtatcgaatgatcaagatgttgttgaaatgaattgtt 21387153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 21972530 - 21972600
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  21972530 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 21972600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 21976615 - 21976685
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  21976615 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 21976685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 22112012 - 22111942
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  22112012 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 22111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 24755959 - 24755856
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcatta 175  Q
    ||||||||||  |||||| || ||||||||||| ||||| |||  || ||||| ||| |||||| ||| || ||||||||||||| |||||| |||||||    
T  24755959 ggtagtaatgtgacctatataggatgttaactgcaatctgtga--agctgttatgaaatgttaagttgattataatgtgatttaatgattaattgcatta 24755862  T
Q  176 cttgaa 181  Q
    ||||||    
T  24755861 cttgaa 24755856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 21828278 - 21828347
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  21828278 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 21828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 22166189 - 22166265
Alignment:
Q  3 agcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||| |||||| ||| | | || ||  |||||||||||||||||||||||| ||| |||||||||||||    
T  22166189 agcacttccagaattgagtgttttagtggattttgagacctgagttgtttggattggtta-gaaaggaactttaggta 22166265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 18862926 - 18862978
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  18862926 ttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 18862978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 21411096 - 21411029
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||| ||||| |||| |||||||||| |||   |||||||||||||||||    
T  21411096 tgtgaattaatgattaaatgcattatttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 21411029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 21805588 - 21805521
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||| ||||| |||| |||||||||| |||   |||||||||||||||||    
T  21805588 tgtgaattaatgattaaatgcattatttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 21805521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22113534 - 22113612
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||||| |||||| ||| | | ||  |  |||||||||||||||||||||||| ||| |||||||||||||    
T  22113534 cgagcacttccagaattgagtgttttagtggattgtgagacctgagttgtttggattggtta-gaaaggaactttaggta 22113612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22135037 - 22135115
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggta 80  Q
    ||||||||||||||| |||||| ||| | | ||  |  |||||||||||||||||||||||| ||| |||||||||||||    
T  22135037 cgagcacttccagaattgagtgttttagtggattgtgagacctgagttgtttggattggtta-gaaaggaactttaggta 22135115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 43251974 - 43251920
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||    
T  43251974 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgat 43251920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17828389 - 17828418
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgag 30  Q
    ||||||||||||||||||||||||||||||    
T  17828389 cgagcacttccagaactgagtgcttttgag 17828418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 30550 - 30776
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||||  ||| ||||||||||||    
T  30550 cgagcacttacagaactgagtgcatttgagaatgttgtgacctgagttgcttgaattgattaggaatggaactttaggtagttgtgagacctatttaaga 30649  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||||||||  ||  ||||||||  |||||  ||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||  |    
T  30650 tgttaactgaaatc--tgtaaagttgtt-tgaacttctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgataaa 30746  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||| ||||||||||||||||||||||||    
T  30747 gatgtagttgaaatgaattgttgttatgaa 30776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1295 - 1522
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||| |||||   |||||||| |  ||||||||||| ||||||||  ||||||||||||||||| ||||||||  ||||||||||||    
T  1295 cgagcacttccagaactaagtgcaagtgagaatgatgagacctgagttgcttggattgactaggaatggaactttagttagtaatgtgacctatttaaga 1394  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| |||  || |||| ||||| ||| ||||||  || || |||||||| ||||||| ||| ||||||||||||| |||| |||||||||| |    
T  1395 tgttaactgagatc--tgtgaagctgttatgaattgttaagctgattataatgtgacttaacgaataattgcattacttgaaatattattgaatgatcaa 1492  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||||||||||||||||||||||    
T  1493 gatgttgttgaaatgaattgttgttatgaa 1522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15397 - 15170
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||||||| ||  |||| || ||||||||||||||||||||| ||| |||| | |||||    
T  15397 cgagcactttcagaactgagtgcatttgagaatgttttgacctgagttgctttaattgatttggaatggaactttaggtagtagtgagacctttataaga 15298  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    ||||||||| ||||  || |||| |||||  ||  ||||| ||| || ||||||||||||| |||||| ||||||||||||| |||| |||||||||| |    
T  15297 tgttaactgcaatc--tgtgaagctgttataaaaagttaagttgattataatgtgatttaatgattaattgcattacttgaaatattattgaatgatcaa 15200  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||||||||||||||| | |||||||    
T  15199 gatgttgttgaaatgaattgatattatgaa 15170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 192123 - 192342
Alignment:
Q  2 gagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagat 101  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||  ||  |||  ||||||||||||||  ||||||||||  |||||||||||||    
T  192123 gagcacttccagaattgagtgcttttgagaatgtcgtgacctgagttgaatgatttgagtaggaatggaacttagggtagtaatgtgacctatttaagat 192222  T
Q  102 gttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    ||||||||| |||| |||  |||||||| ||| | ||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||| | || |    
T  192223 gttaactgagatctgtga--agttgttatgaatttttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaattaccttg 192320  T
Q  201 atgttgttg-aaatgaattgtt 221  Q
    ||||||||| ||||||||||||    
T  192321 atgttgttgaaaatgaattgtt 192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 4030 - 4240
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||||| ||   |||| ||||||| ||| |||| |||||||||||||||||||||||||||  ||||||||||||    
T  4030 cgagcacttccagaactgagtgcttttgagattgccgtgacttgagttgattgaattgattaggaatggaactttaggtagtaatgtgacctatttaaga 4129  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| |  | || |||  ||||| ||| ||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||     
T  4130 tgttaactgaga--tatgtgaatctgttatgaattgttaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataacctt 4227  T
Q  200 gatgttgttgaaa 212  Q
    || ||||||||||    
T  4228 gaagttgttgaaa 4240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 35316 - 35546
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||  ||  |||  |||||||||| ||||| |||||||||  |||||||| |||    
T  35316 cgagcacttccagaactgagtgcttttgagaatgacgtgacctgagttgaatgagttgagtaggaatggagctttatgtagtaatgtgacctatttgaga 35415  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||||||| | || |||  || ||||| ||| | ||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||     
T  35416 tgttaactgagacctgtga--agctgttatgaattattaagctgtttgtaatgtgatttaatgattaaatgcattacttgatttattcttgaataacctt 35513  T
Q  200 gatgttgttg-aaatgaattgttgttatgaaat 231  Q
    |||||||||| ||||||||||||||||||||||    
T  35514 gatgttgttgaaaatgaattgttgttatgaaat 35546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 7076 - 7305
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||| |||||||||||||||||||||||| |   | |||| | |||    
T  7076 cgagcacttccagaactgagtgcttttgataatgtcgtaacctgagttgtttggattgtttaggaatggaactttaggtagtattatgatctatgtgaga 7175  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||| |||| ||||  | ||||| |||  |||||    |||||||||||||||| ||||||||||||||||||| |||||||||||| |  | |    
T  7176 tgttaactgagatctgtgag--gctgttatgaaaagttaaactgttgtaatgtgatttaaagattaaatgcattacttgatttattcttgaataactttg 7273  T
Q  201 atgttgttg-aaatgaattgttgttatgaaat 231  Q
    ||||||||| |||||||||||||| |||||||    
T  7274 atgttgttgaaaatgaattgttgtgatgaaat 7305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 2102 - 1876
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||||||||  || || |||||| ||| |||  ||||||||||||| |||||||||| ||| |||||| |||||    
T  2102 cgagcacttccagaactgagtgcatttgagaatgtcgtgccccgagttgattgaatttattaggaatggaacattaggtagtagtgagacctatataaga 2003  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||| |||||| | ||||  | ||||  |||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||       
T  2002 tgttaaatgaaatatgtgag--gctgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgataac 1906  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||| |||||||||||||| ||||||||    
T  1905 gatgttattgaaatgaattgtggttatgaa 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19097 - 19314
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||| ||| |||| ||||||||||||| |||||||||| ||| |||||| |||||    
T  19097 cgagcacttccagaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaacattaggtagtagtgagacctatataaga 19196  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
    |||||| |||||||| |||  || ||||| ||||| ||||  || || | ||||||||||  |||||| ||||||||||||  |||| |||||| ||| |    
T  19197 tgttaaatgaaatctgtga--agctgttatgaactattaagctgattatgatgtgatttattgattaattgcattacttgagatattattgaataatcaa 19294  T
Q  200 gatgttgttgaaatgaattg 219  Q
    ||||||||||||||||||||    
T  19295 gatgttgttgaaatgaattg 19314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 66221 - 66438
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  66221 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaaga 66320  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  66321 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 66418  T
Q  201 atgttgttgaa-atgaattg 219  Q
    | ||||||||| ||||||||    
T  66419 aagttgttgaagatgaattg 66438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 53865 - 53648
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  53865 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggaaaggaactttaggtactaatgagacctatttaaga 53766  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  53765 tattaactgagaac--tgtgaagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 53668  T
Q  201 atgttgttgaa-atgaattg 219  Q
    | ||||||||| ||||||||    
T  53667 aagttgttgaagatgaattg 53648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 36046 - 36113
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  36046 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 36113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 36350 - 36419
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  36350 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 36419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 4741 - 4512
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||| |   |||||||||| ||| ||| |||||||| |||| |||||||||||||||||||||||| ||| |||||| |||||    
T  4741 cgagcacttccagaactgagttcaagtgagaatgttgtgaactgtgttgtttgaattgattaggaatggaactttaggtagtagtgagacctatataaga 4642  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
     |||||||| || |  || |||  | ||| ||| || ||| ||| || ||||||||||||  |||||| ||||||||||||| |||| | |||||||| |    
T  4641 agttaactgtaaac--tgtgaaactattatgaaatgctaagttgattataatgtgatttattgattaattgcattacttgaaatattatcgaatgatcaa 4544  T
Q  200 gatgttgttgaaatgaattgttgttatgaaat 231  Q
    |||||||||||||||||||| | |||||||||    
T  4543 gatgttgttgaaatgaattgatattatgaaat 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 597 - 530
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  597 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 1130 - 979
Alignment:
Q  78 gtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattac 176  Q
    |||||||||  ||||||||||||||||||||||||||| ||||  | ||||  || ||| ||| ||||||||||||||||||||||||||||||||||||    
T  1130 gtagtaatgtgacctatttaagatgttaactgaaatctgtgag--gctgttt-gacctgctaagttgtttgtaatgtgatttaacgattaaatgcattac 1034  T
Q  177 ttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  1033 ttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaaat 979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 6294 - 6449
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||||||||||||||| | |||  || ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  6294 ttaggtagtaatgtgacctatttaagatgttaactgaaatatgtga--agctgttt-gaactgctaacttgtttgtaatgtgatttaatgattaaatgca 6390  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||| ||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  6391 ttactcgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaaat 6449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 19823 - 20043
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||    
T  19823 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggattggttaggaaaggaactttaggtactaatgagacctattaaaga 19922  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatcta 199  Q
    | |||| ||| | |  || |||| | ||| |||  ||||| || || ||||||||||||  |||| | |||| |||||||||||||| |||||||||| |    
T  19923 tattaattgagaac--tgtgaagcttttatgaaacgttaagtgattataatgtgatttattgattgattgcatttacttgaattattattgaatgatcaa 20020  T
Q  200 gatgttgttg-aaatgaattgtt 221  Q
    ||  |||||| ||||||||||||    
T  20021 gaaattgttgaaaatgaattgtt 20043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 631 - 494
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||| ||| |||| ||||||||||||| |||||||||| ||| |||||| |||||    
T  631 cgagcacttccagaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaacattaggtagtagtgagacctatataaga 532  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa 140  Q
    |||||| |||||||  || |||||||||| ||||| ||||    
T  531 tgttaaatgaaatc--tgtgaagttgttatgaactattaa 494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 229
Target Start/End: Complemental strand, 5865 - 5669
Alignment:
Q  32 atgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaag 131  Q
    |||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||  ||||| |||||||||||||||| ||||||  |||| ||||| |    
T  5865 atgttaagacctgagttgcttggattgattaggaatgggactttaggtagtaatgtgaccta-ttaagatgttaactgagatcttt--gaagctgttatg 5769  T
Q  132 aactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttg-aaatgaattgttgttatgaa 229  Q
    || ||||||  || || |||||||||| || || ||| ||||||||||||  |||| |||||||||| ||||||||||| |||||||||| | |||||||    
T  5768 aattgttaagctgattataatgtgattaaatgaataattgcattacttgagatattattgaatgatcaagatgttgttgaaaatgaattgatattatgaa 5669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 229
Target Start/End: Complemental strand, 7060 - 6864
Alignment:
Q  32 atgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaag 131  Q
    |||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||  ||||| |||||||||||||||| ||||||  |||| ||||| |    
T  7060 atgttaagacctgagttgcttggattgattaggaatgggactttaggtagtaatgtgaccta-ttaagatgttaactgagatcttt--gaagctgttatg 6964  T
Q  132 aactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttg-aaatgaattgttgttatgaa 229  Q
    || ||||||  || || |||||||||| || || ||| ||||||||||||  |||| |||||||||| ||||||||||| |||||||||| | |||||||    
T  6963 aattgttaagctgattataatgtgattaaatgaataattgcattacttgagatattattgaatgatcaagatgttgttgaaaatgaattgatattatgaa 6864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 21428 - 21601
Alignment:
Q  55 attggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgt 153  Q
    |||| ||||| ||||| | |||||||||||||  |||||||||||||||||||||||||  ||| |||| || || ||||||||||  || || ||||||    
T  21428 attgattagggatggacccttaggtagtaatgtgacctatttaagatgttaactgaaat--ttgtgaagctgctatgaactgttaagctgattataatgt 21525  T
Q  154 gatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||| |||||| || |||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||    
T  21526 gatttaatgattaattgtattacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaa 21601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 80618 - 80715
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||| ||||||||||||||| ||||||||||||| || ||| |||| |||||||||| |||||||||||||||||||||||    
T  80618 tgttatgaactgctaagttgtctgtaatgtgatttaatgattaaatgcattgctcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 80715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 2067 - 1912
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    ||||| |||||||  ||||||||||||||||||| ||||||| ||| |   ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  2067 ttagggagtaatgtgacctatttaagatgttaaccgaaatctgtgaaac--tgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgca 1971  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||    
T  1970 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatgaaat 1912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 74 - 228
Target Start/End: Complemental strand, 9749 - 9597
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    ||||| |||||||  ||||||||||||||||||| ||||||| ||| |   ||||  |||||| ||| |||||||||||||||||||| |||||||||||    
T  9749 ttagggagtaatgtgacctatttaagatgttaaccgaaatctgtgaaac--tgttt-gaactgctaagttgtttgtaatgtgatttaatgattaaatgca 9653  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatga 228  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| | ||||||    
T  9652 ttacttgaaatattattgaatgatcaagatgttgttgaaatgaattgatattatga 9597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 70; Significance: 1e-31; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 81012 - 80794
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| |||||||||||||| |  ||  ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||||| |||||    
T  81012 cgagcacatccagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaaga 80913  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||   | |||| |||| |||   ||| || ||| ||||| ||||||||||||   ||| | |||||||||||||||||| ||||||||||  |    
T  80912 tgttaactg--ttatttgtgaagctgtattgaaatgctaagtgtttataatgtgatttattaattgattgcattacttgaattattattgaatgatcagg 80815  T
Q  201 atgttgttgaaatgaattgtt 221  Q
    | | |||||||||||||||||    
T  80814 aagatgttgaaatgaattgtt 80794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 80540 - 80460
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||| ||||||||||||    
T  80540 ttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttaaaatgaattgtt 80460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13072 - 12964
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| |||  ||||||| ||| |||| ||| | ||||| | |||||||||||||| |||||| |||||    
T  13072 cgagcacttccagaactgagtgcaaatgagaatgttgtgatatgagttgcttgaattgattatggatggacccttaggtagtaatgagacctatataaga 12973  T
Q  101 tgttaactg 109  Q
     ||||||||    
T  12972 agttaactg 12964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 65473 - 65543
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||| ||||||||||    
T  65473 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaagaagttgttgaaa 65543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 61557 - 61627
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  61557 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 61627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 69; Significance: 5e-31; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 45418 - 45281
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||| ||| |||| |||||||||||||  ||||||||| ||| |||||| |||||    
T  45418 cgagcacttccagaactgagtgcatttgagaatgtcgtgacctgagttgattgaattgattaggaatggaacaataggtagtagtgagacctatataaga 45319  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa 140  Q
    |||||| |||||||  || |||||||||| ||||| ||||    
T  45318 tgttaaatgaaatc--tgtgaagttgttatgaactattaa 45281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7244 - 7135
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||| ||||||||||  |||||||||||  |||||  ||||||| ||||    
T  7244 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggaatggttaggaaaagaactttaggtgctaatgtgacctattaaaga 7145  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  7144 tattgactga 7135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 35888 - 35965
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||| |||||    
T  35888 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaattaattg 35965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 36221 - 36273
Alignment:
Q  141 ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  36221 ttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaat 36273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 13293 - 13501
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| |||||||| |||||||  ||| |||||||| |||||| ||||||||||||    
T  13293 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgcttggattgattaggaaatgaattttaggtactaatgagacctatttaaga 13392  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || | || | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||| ||||||| |||||||||| ||    
T  13393 tattaactgataac--tgtgtagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattactttaattattattgaatgatcaag 13490  T
Q  201 atgttgttgaa 211  Q
    | |||||||||    
T  13491 aagttgttgaa 13501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 44318 - 44163
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||  || | || | ||||| ||| |||||||||||||||||||| |||||||||||    
T  44318 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtga--agcttttta-aactgctaagttgtttgtaatgtgatttaatgattaaatgca 44222  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaat 231  Q
    |||||| || |||| |||||| ||| ||||||||| ||||||||||| | |||||||||    
T  44221 ttacttaaaatattattgaattatcaagatgttgtggaaatgaattgatattatgaaat 44163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 24774 - 24969
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||    
T  24774 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggattggttaggaaaggaactttaggtactaatgagacctattaaaga 24873  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatc 197  Q
    | || ||||| | |  || |||| | ||| ||| |||||| || || ||| |||| |||  |||| | |||| |||||||||||||| ||||||||||    
T  24874 tattgactgagaac--tgtgaagcttttaggaaatgttaagtgattataaagtgaattatggattgattgcatttacttgaattattattgaatgatc 24969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 189337 - 189404
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  189337 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 189641 - 189710
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  189641 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 229
Target Start/End: Complemental strand, 417 - 243
Alignment:
Q  55 attggttaggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgt 153  Q
    |||| ||||| ||||| | |||||||||||||  ||||| ||||||||||||| ||||||| |||  || ||||| |||||||||| ||| || ||||||    
T  417 attgattagggatggacccttaggtagtaatgtgacctaattaagatgttaacggaaatctgtga--agctgttatgaactgttaagttgattataatgt 320  T
Q  154 gatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttg-aaatgaattgttgttatgaa 229  Q
    ||||||| || ||| ||||||||||||| |||| |||||||||| ||||||||||| |||||||||| | |||||||    
T  319 gatttaatgactaattgcattacttgaaatattattgaatgatcaagatgttgttgaaaatgaattgatattatgaa 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2479 - 2697
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| ||||||| ||||||||  ||   |||||||||| |||||||| |||||||  |||||||||||| |||||| ||||||||||||    
T  2479 cgagcacttccagaattgagtgcatttgagaagtttgaaacctgagttgcttggattgattaggaaatgaactttaggtactaatgagacctatttaaga 2578  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| |   ||| |||| | ||| |||||| ||| || || || |||||| ||  |||| | || |||||||||||| || |||||||||| ||    
T  2579 tattaactgaga--attgtgaagcttttatgaactgctaagtgattatattgtgatatattgattgattggattacttgaattgttattgaatgatcaag 2676  T
Q  201 atgttgttgaaatgaattgtt 221  Q
    |  ||||||||||||||||||    
T  2677 aaattgttgaaatgaattgtt 2697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1889 - 2117
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| ||| ||| || |  || || | |||||  |||| | |||||||||||||  ||||||||||||    
T  1889 cgagcacttccagaactgagtgcaaatgagaatgttgtgatctgtgtcgcatgaatcgattagggttggacccttaggtagtaatgtgacctatttaaga 1988  T
Q  101 tgttaactgaaatctttgagaagttgttaagaac-tgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatct 198  Q
    | ||||||||||| | |||  || ||||| |||  || ||| ||||||||||||| |||||| |||||||||||||||||||| | |  ||||||||||     
T  1989 tattaactgaaatatgtga--agctgttatgaaaatgctaagttgtttgtaatgtaatttaatgattaaatgcattacttgaaatttcattgaatgatca 2086  T
Q  199 agatgttgttgaaatgaattgttgttatgaa 229  Q
    |||||||||||||||| |||| | |||||||    
T  2087 agatgttgttgaaatggattgatattatgaa 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 1731 - 1587
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||||||| |||| |||  || || || ||||||||||  || || ||||||||||||| |||||| ||||    
T  1731 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtga--agctgctatgaactgttaagctgattataatgtgatttaatgattaattgca 1634  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||| |||| |||||||||| |||||||| ||||||||||||    
T  1633 ttacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 229
Target Start/End: Complemental strand, 42860 - 42709
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||||||| |||| |||  || ||||| ||||||||||  || || ||||||||||||| |||||||||||    
T  42860 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtga--agctgttatgaactgttaagctgattctaatgtgatttaatgattaaatgca 42763  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||| |||| |||||||||| |||   ||||||||||||||| | |||||||    
T  42762 ttacttgaaatattattgaatgatcaaga---tgttgaaatgaattgatattatgaa 42709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 228179 - 228399
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| ||  |  |||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||| ||||||    
T  228179 cgagcacttccagaactgagtgcatttgaggattgtgagacctgagttgtttggattggttaggaaaggaaccttaggtactaatgagacctacttaaga 228278  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatcta 199  Q
    | |||||||| | |  || |||||| ||| ||| || ||| || || ||  ||||||||  |||| | |||| |||||||||||||| |||||||||| |    
T  228279 tattaactgagaac--tgtgaagtttttatgaaatgctaagtgattatatagtgatttattgattgattgcatttacttgaattattattgaatgatcaa 228376  T
Q  200 gatgttgttg-aaatgaattgtt 221  Q
    ||  | |||| ||||||||||||    
T  228377 gaaatagttgaaaatgaattgtt 228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 9471 - 9666
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| ||  |  |||||||||||||||||||| ||||||| ||||| ||||||| |||||| ||||||||||||    
T  9471 cgagcacttccagaactgagtgcatttgaggattatgagacctgagttgtttggattgattaggaaaggaaccttaggtactaatgagacctatttaaga 9570  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatc 197  Q
    | |||||||| | |  || |||| | ||| ||| | |||| || || ||||||||||||  |||| |  ||| |||||||||||||| ||||||||||    
T  9571 tattaactgagaac--tgtgaagcttttatgaaattttaagtgattataatgtgatttattgattgatcgcatttacttgaattattattgaatgatc 9666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16926 - 17144
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| ||||| |||||| ||||||||||   |||||||||||| ||| |||| |||||||||||||||||||||||| ||| |||||           
T  16926 cgagcacttcaagaaccgagtgcatttgagaatgccgtgacctgagttgcttgaattgattaggaatggaactttaggtagtagtgagaccta------- 17018  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
      ||||||||| ||| |  |||| | |||  |||||| | ||| || ||||||||||||| |||||| ||||||||||||| |||| ||||||| || ||    
T  17019 --ttaactgaattctat--gaagctattataaactgtaagttgattataatgtgatttaatgattaattgcattacttgaaatattattgaatgttcaag 17114  T
Q  201 atgttgtt-gaaatgaattgttgttatgaa 229  Q
    |||||||| ||||||||||| | |||||||    
T  17115 atgttgttggaaatgaattgatattatgaa 17144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 18461 - 18688
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||  ||  ||| |||| ||  |||| || || ||||| | |||||||||||||| |||||| |||||    
T  18461 cgagcacttccagaactgagtgcaagtgagaatgtcgtgttctgtgttgcttcaattgatttgggatggacccttaggtagtaatgagacctatataaga 18560  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatcta 199  Q
     |||||||| ||||| |||  || ||||| ||| || ||  ||| || ||||||||||||| |||||| | ||||||||||| |||| |||||||||| |    
T  18561 agttaactgcaatctgtga--agctgttatgaaatggtatgttgattataatgtgatttaatgattaattccattacttgaaatattattgaatgatcaa 18658  T
Q  200 gatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||||||| |||||| | |||||||    
T  18659 gatgttgttgaaacgaattgatattatgaa 18688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 31061 - 30964
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||    
T  31061 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattattgaatgatcaagatgttgttgaaatgaattgtt 30964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 13204 - 12987
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||| |||||| | |||| || ||  ||| ||||||| |||||||| |||||||  |||||||||||| |||||| ||||||||||||    
T  13204 cgagcacttccagaaccgagtgcatatgaggattttgagacttgagttgcttggattgattaggaaatgaactttaggtactaatgagacctatttaaga 13105  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || | || | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  13104 tattaactgagaac--tgtggagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatcaag 13007  T
Q  201 atgttgttgaa-atgaattg 219  Q
    |  |||||||| ||||||||    
T  13006 aaattgttgaagatgaattg 12987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 19488 - 19271
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| | |||| || ||  ||| ||||||| || ||||| |||||||  ||||||| |||| |||||| |  |||||||||    
T  19488 cgagcacttccagaactgagtgcatatgaggattttgagacttgagttgcttagattgattaggaaatgaactttcggtactaatgagatatatttaaga 19389  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | |||||||| | |  || | || | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||| ||||||| |||||||||| ||    
T  19388 tattaactgagaac--tgtggagctattatgaaatgctaagtgattataatgtgatttattgattgattgcattactttaattattattgaatgatcaag 19291  T
Q  201 atgttgttgaa-atgaattg 219  Q
    |  |||||||| ||||||||    
T  19290 aaattgttgaagatgaattg 19271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 18438 - 18657
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| ||  |  ||||||||||||||||||| |||||||| ||||||||||||| |  ||| ||||||| ||||    
T  18438 cgagcacttccagaactgagtgcatttgaggattgtgagacctgagttgtttggattagttaggaagggaactttaggtactgctgagacctattaaaga 18537  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    | || | ||| | |  || |||| | ||| ||| || ||| || || ||||||||||||  |||| | |||||||||||||||||| |||||||||| ||    
T  18538 tattgaatgagaac--tgtgaagcttttatgaaatgctaagtgattataatgtgatttattgattgattgcattacttgaattatttttgaatgatcaag 18635  T
Q  201 atgttgttg-aaatgaattgtt 221  Q
    |  || ||| ||||||||||||    
T  18636 aaattattgaaaatgaattgtt 18657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21611 - 21725
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| ||| ||| |||| ||| |||||||||| ||||| | |||||||||||||| |||||| |||||    
T  21611 cgagcacttccagaactgagtgcaagtgagaatgttgtgatctgtgttgcttgaattggttagggatggacccttaggtagtaatgagacctatataaga 21710  T
Q  101 tgttaactgaaatct 115  Q
    ||||||||| |||||    
T  21711 tgttaactgcaatct 21725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29503 - 29617
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||   |||||||||| ||| ||| |||| ||| |||||||||| ||||| | |||||||||||||| |||||| |||||    
T  29503 cgagcacttccagaactgagtgcaagtgagaatgttgtgatctgtgttgcttgaattggttagggatggacccttaggtagtaatgagacctatataaga 29602  T
Q  101 tgttaactgaaatct 115  Q
    ||||||||| |||||    
T  29603 tgttaactgcaatct 29617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 229
Target Start/End: Complemental strand, 631 - 477
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat-tgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||||||||||||||| ||| |||| |||  || |  || ||||||||||  || || ||||||||||||| |||||||||||    
T  631 ttaggtagtaatgcgacctatttaagatgttaattgagatctgtga--agctactatgaactgttaagctgattataatgtgatttaatgattaaatgca 534  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||| |||| |||||||||| |||||| ||||||| |||||| | |||||||    
T  533 ttacttgaaatattattgaatgatcaagatgtcgttgaaaagaattgatattatgaa 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 6857 - 6760
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||| | |||||||| |||||||||||||||||||||||    
T  6857 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattactcgaaatattatagaatgatcaagatgttgttgaaatgaattgtt 6760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 229
Target Start/End: Original strand, 46605 - 46759
Alignment:
Q  74 ttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgca 172  Q
    |||||||||||||  |||||| ||||| |||||||| ||||| |||  || ||||| ||| || ||| ||| || ||||||||||||| |||||| ||||    
T  46605 ttaggtagtaatgtgacctatataagaagttaactgcaatctgtga--agctgttatgaaatgctaagttgattataatgtgatttaatgattaattgca 46702  T
Q  173 ttacttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaa 229  Q
    ||||||||| |||| |||||||||| ||||||||| ||||||||||| | |||||||    
T  46703 ttacttgaaatattattgaatgatcaagatgttgtggaaatgaattgatattatgaa 46759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5806 - 5898
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaaccta 93  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  5806 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggattgattaggaaaggaactttaggtactaatgagaccta 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 229 - 9
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||||||||||||||||||||||  ||||||||||||| |||||| || |||| || |    
T  229 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggattggttaggataggaactttaggtactaatgagacttattaaaaa 130  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgca-ttacttgaattattcttgaatgatcta 199  Q
    | || ||||| | |  || |||| | ||| ||| |||||| ||  | ||| |||| |||  |||| | |||| |||||||||||||| |||||||||| |    
T  129 tattgactgagaac--tgtgaagcttttatgaaatgttaagtgaatataaagtgaattatggattgattgcatttacttgaattattattgaatgatcaa 32  T
Q  200 gatgttgttga-aatgaattgtt 221  Q
    ||  ||||||| |||||||||||    
T  31 gaaattgttgagaatgaattgtt 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 15075 - 15243
Alignment:
Q  61 taggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaatt-gtttgtaatgtgattta 159  Q
    ||||||||||||||  ||||||||||  ||||| |||||||||||||||| |||| |||  || ||||| ||| || |||   |||||||||||||||||    
T  15075 taggaatggaacttagggtagtaatgtgacctacttaagatgttaactgagatctgtga--agctgttatgaattgctaagcagtttgtaatgtgattta 15172  T
Q  160 acgattaaatgcattacttgaattattcttgaatgatctagatgttgttg-aaatgaattgttgttatgaa 229  Q
    | |||||||||||||||| |  |||||||||||| | || |||||||||| ||||||| |||| |||||||    
T  15173 atgattaaatgcattactgggtttattcttgaataaccttgatgttgttgaaaatgaagtgttattatgaa 15243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 19597 - 19765
Alignment:
Q  61 taggaatggaactttaggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaatt-gtttgtaatgtgattta 159  Q
    ||||||||||||||  ||||||||||  ||||| |||||||||||||||| |||| |||  || ||||| ||| || |||   |||||||||||||||||    
T  19597 taggaatggaacttagggtagtaatgtgacctacttaagatgttaactgagatctgtga--agctgttatgaattgctaagcagtttgtaatgtgattta 19694  T
Q  160 acgattaaatgcattacttgaattattcttgaatgatctagatgttgttg-aaatgaattgttgttatgaa 229  Q
    | |||||||||||||||| |  |||||||||||| | || |||||||||| ||||||| |||| |||||||    
T  19695 atgattaaatgcattactgggtttattcttgaataaccttgatgttgttgaaaatgaagtgttattatgaa 19765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3336 - 3445
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| ||  |  ||||| |||||||||||||||||||||| ||||||||||||| |||||| ||| ||| ||||    
T  3336 cgagcacttccagaactgagtgcatttgaggattgtgagaccttagttgtttggattggttaggaaaggaactttaggtactaatgagacccattaaaga 3435  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  3436 tattgactga 3445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 10390 - 10584
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| |||| ||||||| ||| ||||| ||  ||||||||||| |||||||| | |||||  |||||||| ||| |||||| ||||||||||||    
T  10390 cgagcacttcaagaaatgagtgcatttaagaattttgagacctgagttgcttggattgataaggaaaagaactttaagtactaatgagacctatttaaga 10489  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatc 197  Q
    | |||||||| | |  || |||| | ||| ||| |  ||| || || ||||||||||||  |||| | |||||||||||||||||| ||||||||||    
T  10490 tattaactgagaac--tgtgaagctattatgaaatactaagtgattataatgtgatttattgattgattgcattacttgaattattattgaatgatc 10584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 3682 - 3890
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| ||||||| ||||||||||   |||| | | ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||||| | |||    
T  3682 cgagcacatccagaattgagtgctttgaggaatttga-gacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctgaga 3780  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  |    
T  3781 tgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcagg 3878  T
Q  201 atgttgttgaaa 212  Q
    | ||||||||||    
T  3879 aagttgttgaaa 3890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 12722 - 12529
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||| || |||| |||||||||||||| |  ||  ||||||||| ||||| || | ||||||||||||||||||||| |||||| |||||| |||||    
T  12722 cgagcacatctagaattgagtgcttttgaggaatttgagacctgagtcgtttgaatggattaggaatggaactttaggtactaatgagacctatctaaga 12623  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgat 196  Q
    |||||||||   | |||| |||| | |   ||| || ||| ||||| ||||||||||||  |||| | |||||||||||||||||| || ||||||    
T  12622 tgttaactg--ttatttgtgaagctatattgaaatgctaagtgtttataatgtgatttattgattgattgcattacttgaattattattaaatgat 12529  T

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Target: scaffold0070 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10203 - 10103
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||||| ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  10203 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttggtttggttaggaaaggaactttaggtactaatgtgacctattaaaga 10104  T
Q  101 t 101  Q
    |    
T  10103 t 10103  T

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Target: scaffold0327 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 590 - 373
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| |||   | |  |||||| ||||| ||||| ||| |||| |||||||||| ||||||||||||||||  ||||||||||||    
T  590 cgagcacttccagaactgaatgcaaattaagatgttaagacctcagttgcttgaattgattaggaatgggactttaggtagtaatgtgacctatttaaga 491  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaattgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctag 200  Q
    |||||||||| |||  || |||| ||||| ||| |||          |||  |||||  | || ||| |||||||||| || |||| |||||||||| ||    
T  490 tgttaactgagatc--tgtgaagctgttatgaattgt----------taagctgattacatgaataattgcattactttaaatattattgaatgatcaag 403  T
Q  201 atgttgttgaaatg-aattgttgttatgaa 229  Q
    |||||||||||||| |||||||||||||||    
T  402 atgttgttgaaatgaaattgttgttatgaa 373  T

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Target: scaffold0166 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 9994 - 10065
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  9994 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaatgaattg 10065  T

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Target: scaffold1124 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 2190 - 2076
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||| ||||||||||||   |||||||||||||| ||| |||| ||| |||| ||||| ||||| | |||||||||||||| |||||| |||||    
T  2190 cgagcacttcgagaactgagtgcaagtgagaatgttatgatctgtgttgcttgaattgattagggatggacccttaggtagtaatgagacctatataaga 2091  T
Q  101 tgttaactgaaatct 115  Q
     |||||||| |||||    
T  2090 agttaactgcaatct 2076  T

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Target: scaffold0546 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6063 - 6172
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  ||||||||||||||||| ||||||||||  |||||||||||  |||||  ||||||| ||||    
T  6063 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagttgtttggaatggttaggaaaagaactttaggtgctaatgtgacctattaaaga 6162  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  6163 tattgactga 6172  T

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Target: scaffold0293 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 20393 - 20490
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||  ||| |||| |||||| ||| |||||||| ||||||||||||||    
T  20393 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacacgaaatattattgaataatcaagatgttgatgaaatgaattgtt 20490  T

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Target: scaffold0010 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23516 - 23407
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||| ||||||||||||||||| ||  |  ||||||||||||||| |||||||||||| ||||| |||| || |||||| ||||||| ||||    
T  23516 cgagcacttccataactgagtgcttttgaggattgtgagacctgagttgtttgtattggttaggaaaggaaccttagttactaatgagacctattcaaga 23417  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  23416 tattgactga 23407  T

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Target: scaffold0016 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 207766 - 207850
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgtt 208  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| || |||||||    
T  207766 tgttatgaactgctaagttgtttgtaatgtgatttaatgattaaatgcattacttgaaatattattgaatgatcaagttgttgtt 207850  T

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Target: scaffold1052 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 3070 - 2999
Alignment:
Q  148 taatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  3070 taatgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttgttgaaattaattg 2999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 6191 - 6351
Alignment:
Q  78 gtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattac 176  Q
    |||||||||  | ||||||| |||||||| || ||||| |||  || | ||| ||| |||||| |||||| || ||||||||||  ||||| ||||||||    
T  6191 gtagtaatgtgatctatttaggatgttaaatgcaatctgtga--agctattatgaaatgttaagttgtttatattgtgatttaattattaattgcattac 6288  T
Q  177 ttgaattattcttgaatgatctagatgttgttgaaatgaattgttgttatgaaatgatgatgt 239  Q
    ||||| |||| |||||||||| ||| ||||||||||||||||| | ||||||| | |||||||    
T  6289 ttgaaatattattgaatgatcaagaagttgttgaaatgaattgatattatgaagttatgatgt 6351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18654 - 18554
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||| |||||| ||| ||| ||  |  ||||||||| |||||||||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  18654 cgagcacttccagaattgagtgttttagaggattgtgagacctgagtggtttggattggttaggaaaggaactttaggtactaatgtgacctattaaaga 18555  T
Q  101 t 101  Q
    |    
T  18554 t 18554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9720 - 9620
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||| ||||||||| ||  |  |||||||| || |||| ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  9720 cgagcacttccagaactgagagcttttgaggattgtgagacctgagctgcttggtttggttaggaaaggaactttaggtactaatgtgacctattaaaga 9621  T
Q  101 t 101  Q
    |    
T  9620 t 9620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 64153 - 64053
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||  ||||| | ||||||||||| ||||||||||||| |||||  ||||||| ||||    
T  64153 cgagcacttccagaactgagtgcttttgaggattgtgagacctgacctgtttagtttggttaggaaaggaactttaggtactaatgtgacctattaaaga 64054  T
Q  101 t 101  Q
    |    
T  64053 t 64053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 34791 - 34894
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcatta 175  Q
    ||||||||||  |||||| |||||||||||||| ||||| |||  || ||||| ||| |||||| ||| || ||||||||||||| |||||| |||||||    
T  34791 ggtagtaatgtgacctatataagatgttaactgcaatctgtga--agctgttatgaattgttaagttgattataatgtgatttaatgattaattgcatta 34888  T
Q  176 cttgaa 181  Q
    ||||||    
T  34889 cttgaa 34894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 76037 - 75952
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatg 86  Q
    |||||||||||||||||||||||||||||| ||  |  |||||||| ||||| | ||||||||||| |||| ||| |||| |||||    
T  76037 cgagcacttccagaactgagtgcttttgaggattgtgagacctgagctgtttagtttggttaggaaaggaaatttcggtactaatg 75952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36605 - 36527
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggt 79  Q
    |||||||||| ||||||||||||||||||| ||  |  |||||||| ||||||||||||||| ||| ||||||||||||    
T  36605 cgagcacttctagaactgagtgcttttgaggattgtgagacctgagctgtttggattggttatgaaaggaactttaggt 36527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 653 - 544
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||| || ||||||| ||  |  |||||||||  |||||| |||||||||  ||||| ||||||| |||||||||||||| ||||    
T  653 cgagcacttccagaactgaatgtttttgaggattgtgagacctgagtgatttggaatggttaggagaggaaccttaggtactaatgaaacctattaaaga 554  T
Q  101 tgttaactga 110  Q
    | || |||||    
T  553 tattgactga 544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 6883 - 7061
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||||||||||||||  |||||||||||  || ||| || |  ||  ||| ||||| ||||  | |||||||||||||  |||||| |||||    
T  6883 cgagcacttccagaactgagtgcaattgagaatgttgcgatctgtgtcgcatgagttgattagggatgggcccttaggtagtaatgtgacctatataaga 6982  T
Q  101 tgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttga 180  Q
    ||||||||| ||||  || |||| ||||| ||| ||||||  || || ||||| ||||||| |||||| ||||||||||||    
T  6983 tgttaactgcaatc--tgtgaagctgttatgaaatgttaagctgattataatgagatttaatgattaattgcattacttga 7061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 73725 - 73790
Alignment:
Q  154 gatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||| |||||| ||||||||||||| |||| |||||||||| |||||||| ||||||||||||    
T  73725 gatttaatgattaattgcattacttgaaatattattgaatgatcaagatgttgatgaaatgaattg 73790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 18206 - 18266
Alignment:
Q  41 cctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaagat 101  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||| ||||||| |||||    
T  18206 cctgagttgtttggattggttaggaaaggaactttaggtgctaatgagacctattaaagat 18266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15224 - 15332
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    ||||||||||||||||||||||| |||||| || ||  ||||||||||| || ||||| ||||||  ||||| || |||| |||||| || || |||| |    
T  15224 cgagcacttccagaactgagtgcatttgaggattttgagacctgagttgctttgattgattaggagaggaacctttggtactaatgagacata-ttaaaa 15322  T
Q  101 tgttaactga 110  Q
    ||||||||||    
T  15323 tgttaactga 15332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 543 - 476
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  543 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 11461 - 11528
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  11461 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 11528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 11765 - 11834
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||| ||||||| |||||||||||||||| ||| |||| ||||||    
T  11765 tgttatgaactgctaagttgtttttaatgcgatttaatgattaaatgcattactcgaaatattattgaat 11834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 14047 - 14114
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattgtt 221  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| |||   |||||||||||||||||    
T  14047 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaaga---tgttgaaatgaattgtt 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 14351 - 14420
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  14351 tgttatgaactgctaagttgtttataatgtgatttaatgattaaatgcattactcgaaatattattgaat 14420  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 32620 - 32675
Alignment:
Q  151 tgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttg 206  Q
    ||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||    
T  32620 tgtgaattaatgattaaatgcattacttgaaatattattgaatgatcaagatgttg 32675  T

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Target: scaffold0157; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 32924 - 32993
Alignment:
Q  125 tgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaat 193  Q
    ||||| |||||| ||| |||||| ||||||||||||| |||||||||||||||| ||| |||| ||||||    
T  32924 tgttatgaactgctaagttgtttttaatgtgatttaatgattaaatgcattactcgaaatattattgaat 32993  T

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Target: scaffold0372 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 5046 - 5116
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  5046 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 5116  T

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Target: scaffold0114 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7604 - 7490
Alignment:
Q  1 cgagcacttccagaactgagtgcttttgagaatgttatgacctgagttgtttggattggttaggaatggaactttaggtagtaatgaaacctatttaaga 100  Q
    |||||||||||| ||||||||||   |||||||||  |||  ||  ||| ||| |||| ||||| ||||| | |||||||||||||| |||||| |||||    
T  7604 cgagcacttccaaaactgagtgcaagtgagaatgtagtgatttgtattgcttgaattgattagggatggacccttaggtagtaatgagacctatataaga 7505  T
Q  101 tgttaactgaaatct 115  Q
     |||||||| |||||    
T  7504 agttaactgcaatct 7490  T

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Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 58664 - 58734
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatctagatgttgttgaaa 212  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||  || ||||||||||    
T  58664 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatcaggaagttgttgaaa 58734  T

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Target: scaffold0268 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 953 - 1008
Alignment:
Q  142 tgtttgtaatgtgatttaacgattaaatgcattacttgaattattcttgaatgatc 197  Q
    ||||| ||||||||||||  |||| | |||||||||||||||||| ||||||||||    
T  953 tgtttataatgtgatttattgattgattgcattacttgaattattattgaatgatc 1008  T

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Target: scaffold0185 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 33692 - 33642
Alignment:
Q  169 tgcattacttgaattattcttgaatgatctagatgttgttgaaatgaattg 219  Q
    ||||||||||||  |||| |||||| ||| |||||||||||||||||||||    
T  33692 tgcattacttgagatattattgaataatcaagatgttgttgaaatgaattg 33642  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 13970 - 14061
Alignment:
Q  89 acctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaa-ttgtttgtaatgtgatttaacgattaaatgcattacttgaa 181  Q
    |||||| || ||||||||||||||||| |||  || ||||| ||| |||||| ||| || ||||||||||||| |||||| || ||||||||||    
T  13970 acctatataggatgttaactgaaatctgtga--agctgttatgaaatgttaagttgattataatgtgatttaatgattaattgaattacttgaa 14061  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 3980 - 3872
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat--tgtttgtaatgtgatttaacgattaaatgcatt 174  Q
    ||||||||||  |||||| |||||| |||| || ||||| |||  || ||||| ||| |||||||  || || ||||||||||||| |||||| ||||||    
T  3980 ggtagtaatgtgacctatataagatattaattgcaatctgtga--agctgttatgaaatgttaatgttgattataatgtgatttaatgattaattgcatt 3883  T
Q  175 acttgaattat 185  Q
    |||||| ||||    
T  3882 acttgagttat 3872  T

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Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 8411 - 8303
Alignment:
Q  77 ggtagtaatgaaacctatttaagatgttaactgaaatctttgagaagttgttaagaactgttaat--tgtttgtaatgtgatttaacgattaaatgcatt 174  Q
    ||||||||||  |||||| |||||| |||| || ||||| |||  || ||||| ||| |||||||  || || ||||||||||||| |||||| ||||||    
T  8411 ggtagtaatgtgacctatataagatattaattgcaatctgtga--agctgttatgaaatgttaatgttgattataatgtgatttaatgattaattgcatt 8314  T
Q  175 acttgaattat 185  Q
    |||||| ||||    
T  8313 acttgagttat 8303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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