View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0449_high_9 (Length: 251)
Name: NF0449_high_9
Description: NF0449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0449_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 42017639 - 42017768
Alignment:
| Q |
30 |
gcatcatggatcgcaattgcagccacatcatacctaattgactgcaatttgctcggtata------accctaatgtgatcgtcgtataaaaccttgatca |
123 |
Q |
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| T |
42017639 |
gcatcatggatcgcaattgcagccacatcatacctaattgactgcaatttgctcggtataattataaccctaatgtgatcgtcgtataaaaccttgatca |
42017738 |
T |
|
| Q |
124 |
acatcaaccaaaagccgtgtctattgaatg |
153 |
Q |
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||||||||| |||||||||||||||||||| |
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| T |
42017739 |
acatcaaccgaaagccgtgtctattgaatg |
42017768 |
T |
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