View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0449_low_5 (Length: 360)

Name: NF0449_low_5
Description: NF0449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0449_low_5
NF0449_low_5
[»] chr3 (79 HSPs)
chr3 (6-270)||(14319883-14320147)
chr3 (6-252)||(11214986-11215220)
chr3 (133-261)||(13073548-13073676)
chr3 (128-270)||(14256219-14256361)
chr3 (133-252)||(1792831-1792950)
chr3 (107-270)||(7802859-7803022)
chr3 (165-252)||(4406128-4406215)
chr3 (140-270)||(29470155-29470285)
chr3 (133-212)||(9389562-9389641)
chr3 (150-245)||(15225170-15225265)
chr3 (6-72)||(14256399-14256465)
chr3 (6-72)||(18844702-18844768)
chr3 (138-232)||(16669392-16669486)
chr3 (265-325)||(4406264-4406324)
chr3 (265-337)||(9389416-9389488)
chr3 (265-333)||(14319784-14319852)
chr3 (265-333)||(18008321-18008389)
chr3 (6-72)||(4406020-4406086)
chr3 (265-331)||(10635319-10635385)
chr3 (265-331)||(12184312-12184378)
chr3 (265-331)||(12247731-12247797)
chr3 (269-331)||(16669272-16669334)
chr3 (265-331)||(23759160-23759226)
chr3 (270-331)||(6499278-6499339)
chr3 (265-325)||(14583177-14583237)
chr3 (265-325)||(17963402-17963462)
chr3 (185-232)||(15835157-15835204)
chr3 (265-331)||(1055756-1055822)
chr3 (265-331)||(4745585-4745651)
chr3 (265-331)||(5512532-5512598)
chr3 (265-331)||(5545925-5545991)
chr3 (265-331)||(5626287-5626353)
chr3 (265-331)||(5874596-5874662)
chr3 (265-331)||(11214871-11214937)
chr3 (184-246)||(13381679-13381741)
chr3 (184-246)||(13392273-13392335)
chr3 (265-331)||(14256122-14256188)
chr3 (265-331)||(16428062-16428128)
chr3 (265-331)||(28323151-28323217)
chr3 (265-331)||(38196627-38196693)
chr3 (265-331)||(39373942-39374008)
chr3 (265-331)||(41685530-41685596)
chr3 (268-333)||(1792714-1792779)
chr3 (95-172)||(15192430-15192507)
chr3 (266-331)||(15225063-15225128)
chr3 (6-72)||(9389666-9389735)
chr3 (6-113)||(16669490-16669597)
chr3 (184-246)||(6219061-6219123)
chr3 (265-331)||(8776545-8776611)
chr3 (187-245)||(9004757-9004815)
chr3 (265-331)||(12295094-12295160)
chr3 (189-235)||(18008137-18008183)
chr3 (265-331)||(18485878-18485944)
chr3 (273-331)||(24392406-24392464)
chr3 (273-331)||(24661744-24661802)
chr3 (265-331)||(9992212-9992280)
chr3 (95-176)||(17908411-17908492)
chr3 (184-236)||(13123477-13123529)
chr3 (184-236)||(14467403-14467455)
chr3 (136-188)||(18008135-18008187)
chr3 (184-236)||(23759046-23759098)
chr3 (178-246)||(37868223-37868291)
chr3 (178-246)||(37876741-37876809)
chr3 (164-235)||(1055619-1055690)
chr3 (265-331)||(6218958-6219024)
chr3 (265-319)||(9004662-9004716)
chr3 (265-331)||(29470058-29470124)
chr3 (265-331)||(37876846-37876912)
chr3 (6-55)||(13123353-13123402)
chr3 (6-55)||(14467279-14467328)
chr3 (265-325)||(16389810-16389870)
chr3 (265-321)||(13381586-13381642)
chr3 (265-321)||(13392180-13392236)
chr3 (265-321)||(15192315-15192371)
chr3 (187-235)||(15225231-15225279)
chr3 (132-176)||(16656940-16656984)
chr3 (187-235)||(16669440-16669488)
chr3 (184-236)||(19780173-19780225)
chr3 (265-321)||(37868328-37868384)
[»] chr2 (31 HSPs)
chr2 (6-270)||(26868753-26869014)
chr2 (6-252)||(28378106-28378348)
chr2 (6-212)||(24423821-24424021)
chr2 (113-236)||(21170792-21170915)
chr2 (6-252)||(20415973-20416192)
chr2 (95-223)||(28730242-28730370)
chr2 (265-333)||(26869045-26869113)
chr2 (265-333)||(28377989-28378057)
chr2 (265-331)||(9771669-9771735)
chr2 (265-331)||(9906492-9906558)
chr2 (265-331)||(22765634-22765700)
chr2 (265-331)||(24423682-24423748)
chr2 (265-333)||(20415856-20415924)
chr2 (265-331)||(10268808-10268874)
chr2 (265-331)||(11403783-11403849)
chr2 (265-331)||(21170664-21170730)
chr2 (265-331)||(27223243-27223309)
chr2 (265-331)||(28730116-28730182)
chr2 (273-331)||(35254828-35254886)
chr2 (273-331)||(35265437-35265495)
chr2 (265-331)||(43347219-43347285)
chr2 (184-236)||(29245952-29246004)
chr2 (265-321)||(34799155-34799211)
chr2 (265-321)||(40224132-40224188)
chr2 (6-48)||(21170962-21171004)
chr2 (265-331)||(29246057-29246123)
chr2 (265-331)||(43084520-43084586)
chr2 (184-236)||(4211651-4211703)
chr2 (184-236)||(9771782-9771834)
chr2 (184-236)||(22958754-22958806)
chr2 (184-236)||(24336803-24336855)
[»] chr6 (42 HSPs)
chr6 (6-270)||(13914795-13915059)
chr6 (6-270)||(18924335-18924587)
chr6 (134-235)||(22287726-22287827)
chr6 (95-212)||(20058908-20059025)
chr6 (265-333)||(17044578-17044646)
chr6 (265-333)||(18924236-18924304)
chr6 (265-333)||(25795738-25795806)
chr6 (265-331)||(9121385-9121451)
chr6 (265-331)||(18833175-18833241)
chr6 (265-331)||(22287893-22287959)
chr6 (265-331)||(25684862-25684928)
chr6 (265-331)||(25733678-25733744)
chr6 (265-331)||(26866618-26866684)
chr6 (265-331)||(27374630-27374696)
chr6 (265-331)||(27464987-27465053)
chr6 (265-328)||(13915090-13915154)
chr6 (265-331)||(4632736-4632802)
chr6 (265-331)||(12725767-12725833)
chr6 (265-331)||(16932217-16932283)
chr6 (265-331)||(25789536-25789602)
chr6 (265-331)||(27343553-27343619)
chr6 (265-331)||(27404293-27404359)
chr6 (265-331)||(32309975-32310041)
chr6 (265-330)||(27386265-27386330)
chr6 (265-330)||(27476678-27476743)
chr6 (189-237)||(19460343-19460391)
chr6 (273-331)||(26027235-26027293)
chr6 (187-236)||(25733794-25733843)
chr6 (265-321)||(12856754-12856810)
chr6 (185-261)||(27386164-27386240)
chr6 (185-261)||(27476577-27476653)
chr6 (184-236)||(34816206-34816258)
chr6 (18-72)||(25795560-25795617)
chr6 (265-331)||(3663227-3663293)
chr6 (265-331)||(12359974-12360040)
chr6 (189-235)||(18833292-18833338)
chr6 (187-232)||(22287713-22287758)
chr6 (150-183)||(25685010-25685043)
chr6 (183-252)||(27374524-27374593)
chr6 (183-252)||(27464881-27464950)
chr6 (183-247)||(9121508-9121572)
chr6 (214-270)||(20048878-20048934)
[»] scaffold0411 (4 HSPs)
scaffold0411 (6-252)||(1375-1621)
scaffold0411 (6-252)||(5406-5652)
scaffold0411 (265-321)||(1270-1326)
scaffold0411 (265-321)||(5301-5357)
[»] chr4 (39 HSPs)
chr4 (6-227)||(15205711-15205929)
chr4 (150-245)||(11537770-11537865)
chr4 (6-252)||(16306875-16307109)
chr4 (133-236)||(3374674-3374777)
chr4 (165-252)||(19572842-19572929)
chr4 (265-333)||(15205554-15205622)
chr4 (138-245)||(10292432-10292539)
chr4 (6-72)||(19572743-19572809)
chr4 (265-331)||(10292580-10292646)
chr4 (164-245)||(39519135-39519216)
chr4 (268-340)||(11537909-11537981)
chr4 (266-333)||(19572979-19573046)
chr4 (265-331)||(4996730-4996796)
chr4 (265-331)||(21998297-21998363)
chr4 (265-331)||(30935399-30935465)
chr4 (265-330)||(452442-452507)
chr4 (185-237)||(14776690-14776742)
chr4 (112-212)||(40469007-40469107)
chr4 (6-72)||(3374586-3374652)
chr4 (265-331)||(24642193-24642259)
chr4 (265-331)||(27658484-27658550)
chr4 (265-331)||(36020171-36020237)
chr4 (265-331)||(39519028-39519094)
chr4 (265-331)||(55754148-55754214)
chr4 (265-330)||(11517083-11517148)
chr4 (273-331)||(10749506-10749564)
chr4 (273-331)||(10963275-10963333)
chr4 (265-331)||(18761413-18761479)
chr4 (184-246)||(30935502-30935564)
chr4 (187-227)||(11516969-11517009)
chr4 (184-236)||(16257679-16257731)
chr4 (184-236)||(17919884-17919936)
chr4 (184-236)||(19953385-19953437)
chr4 (265-331)||(16307158-16307224)
chr4 (184-246)||(21998198-21998260)
chr4 (184-246)||(24026461-24026523)
chr4 (268-321)||(3374839-3374892)
chr4 (6-55)||(24026583-24026632)
chr4 (187-235)||(11537756-11537804)
[»] scaffold0016 (2 HSPs)
scaffold0016 (6-252)||(193670-193904)
scaffold0016 (265-333)||(193953-194021)
[»] scaffold0201 (2 HSPs)
scaffold0201 (6-252)||(111-339)
scaffold0201 (265-333)||(388-456)
[»] chr8 (34 HSPs)
chr8 (128-270)||(18155562-18155704)
chr8 (101-212)||(23467802-23467913)
chr8 (110-270)||(19226678-19226838)
chr8 (140-225)||(30323673-30323758)
chr8 (6-72)||(18155476-18155542)
chr8 (265-333)||(18155735-18155803)
chr8 (185-237)||(3834655-3834707)
chr8 (185-237)||(17517483-17517535)
chr8 (265-331)||(208519-208585)
chr8 (265-331)||(722142-722208)
chr8 (265-331)||(13686927-13686993)
chr8 (265-331)||(29078580-29078646)
chr8 (265-331)||(32086626-32086692)
chr8 (265-331)||(44482972-44483038)
chr8 (184-236)||(19130488-19130540)
chr8 (265-331)||(243670-243736)
chr8 (265-331)||(797040-797106)
chr8 (273-331)||(3357574-3357632)
chr8 (273-331)||(9342967-9343025)
chr8 (265-331)||(19226869-19226935)
chr8 (265-331)||(19420287-19420353)
chr8 (265-331)||(36079795-36079861)
chr8 (265-331)||(36294793-36294859)
chr8 (184-236)||(6152859-6152911)
chr8 (265-321)||(15765484-15765540)
chr8 (184-236)||(15765602-15765654)
chr8 (265-321)||(15789621-15789677)
chr8 (184-236)||(15789739-15789791)
chr8 (189-236)||(23785264-23785311)
chr8 (265-331)||(19130593-19130659)
chr8 (95-181)||(19420135-19420221)
chr8 (184-246)||(26113057-26113119)
chr8 (186-235)||(23372442-23372491)
chr8 (265-321)||(26113156-26113212)
[»] chr5 (55 HSPs)
chr5 (133-270)||(17448408-17448545)
chr5 (133-270)||(34060997-34061134)
chr5 (95-212)||(23404900-23405017)
chr5 (112-209)||(19476401-19476498)
chr5 (6-72)||(34061159-34061225)
chr5 (140-225)||(1112988-1113073)
chr5 (112-212)||(20789158-20789258)
chr5 (18-72)||(17448329-17448383)
chr5 (265-331)||(31446896-31446962)
chr5 (265-331)||(31842425-31842491)
chr5 (265-325)||(17448576-17448636)
chr5 (265-333)||(34060898-34060966)
chr5 (265-331)||(15995064-15995130)
chr5 (184-237)||(23480014-23480067)
chr5 (265-331)||(9344982-9345048)
chr5 (265-331)||(14448792-14448858)
chr5 (265-331)||(14559824-14559890)
chr5 (265-331)||(15767794-15767860)
chr5 (265-331)||(17616091-17616157)
chr5 (265-331)||(17727948-17728014)
chr5 (265-331)||(23305306-23305372)
chr5 (265-331)||(23370963-23371029)
chr5 (265-331)||(23705804-23705870)
chr5 (265-331)||(24589838-24589904)
chr5 (265-331)||(24818643-24818709)
chr5 (265-331)||(27043993-27044059)
chr5 (265-331)||(30229212-30229278)
chr5 (265-331)||(31357565-31357631)
chr5 (265-331)||(36584283-36584349)
chr5 (265-331)||(37731730-37731796)
chr5 (265-331)||(42051804-42051870)
chr5 (265-330)||(21416141-21416206)
chr5 (265-330)||(21416238-21416303)
chr5 (184-236)||(39360794-39360846)
chr5 (273-331)||(6984785-6984843)
chr5 (265-331)||(19476298-19476363)
chr5 (22-72)||(19476508-19476558)
chr5 (273-331)||(22684475-22684533)
chr5 (265-331)||(23404760-23404826)
chr5 (273-331)||(27469033-27469091)
chr5 (265-331)||(35224513-35224579)
chr5 (265-331)||(36696736-36696802)
chr5 (273-331)||(39492661-39492719)
chr5 (273-330)||(14039070-14039127)
chr5 (186-246)||(15994967-15995027)
chr5 (184-236)||(22155625-22155677)
chr5 (265-331)||(5292318-5292384)
chr5 (265-331)||(20560679-20560745)
chr5 (265-331)||(27605188-27605254)
chr5 (150-252)||(31446999-31447101)
chr5 (184-246)||(31842528-31842590)
chr5 (178-232)||(39360813-39360867)
chr5 (95-176)||(20560816-20560897)
chr5 (186-246)||(5292221-5292281)
chr5 (184-236)||(40399519-40399571)
[»] chr1 (31 HSPs)
chr1 (95-252)||(7680955-7681112)
chr1 (95-270)||(26562169-26562344)
chr1 (140-212)||(152696-152768)
chr1 (265-331)||(12732336-12732402)
chr1 (265-331)||(12742929-12742995)
chr1 (186-237)||(22644573-22644624)
chr1 (265-331)||(3173404-3173470)
chr1 (265-331)||(13424908-13424974)
chr1 (265-331)||(35399472-35399538)
chr1 (265-331)||(35646997-35647063)
chr1 (265-331)||(38096885-38096951)
chr1 (265-331)||(5835029-5835095)
chr1 (273-331)||(7509089-7509147)
chr1 (265-331)||(23158162-23158228)
chr1 (265-331)||(26562375-26562441)
chr1 (273-331)||(36245381-36245439)
chr1 (273-331)||(51654825-51654883)
chr1 (270-331)||(47616866-47616927)
chr1 (184-236)||(13425036-13425088)
chr1 (187-234)||(21206444-21206491)
chr1 (187-234)||(21214488-21214535)
chr1 (184-246)||(12732237-12732299)
chr1 (184-246)||(12742830-12742892)
chr1 (265-331)||(19180749-19180815)
chr1 (6-55)||(12622334-12622383)
chr1 (6-55)||(21865290-21865339)
chr1 (134-183)||(21865415-21865464)
chr1 (265-321)||(4169110-4169166)
chr1 (184-236)||(12622207-12622259)
chr1 (184-236)||(19180644-19180696)
chr1 (184-232)||(21865399-21865447)
[»] scaffold0398 (4 HSPs)
scaffold0398 (95-245)||(2714-2864)
scaffold0398 (95-245)||(10969-11119)
scaffold0398 (265-331)||(2598-2664)
scaffold0398 (265-331)||(10853-10919)
[»] scaffold0251 (1 HSPs)
scaffold0251 (111-261)||(24304-24454)
[»] scaffold0474 (1 HSPs)
scaffold0474 (107-212)||(93-198)
[»] scaffold0272 (4 HSPs)
scaffold0272 (265-333)||(21188-21256)
scaffold0272 (8-80)||(11764-11836)
scaffold0272 (165-232)||(11651-11718)
scaffold0272 (216-264)||(11634-11682)
[»] scaffold2119 (2 HSPs)
scaffold2119 (128-252)||(706-830)
scaffold2119 (265-331)||(612-678)
[»] scaffold0195 (3 HSPs)
scaffold0195 (165-245)||(31658-31738)
scaffold0195 (265-331)||(31779-31845)
scaffold0195 (6-105)||(31535-31634)
[»] chr7 (41 HSPs)
chr7 (181-252)||(25213790-25213861)
chr7 (265-331)||(2714608-2714674)
chr7 (95-181)||(9161482-9161568)
chr7 (265-331)||(465979-466045)
chr7 (265-331)||(1989405-1989471)
chr7 (265-331)||(8011067-8011133)
chr7 (265-331)||(9087076-9087142)
chr7 (265-331)||(11007024-11007090)
chr7 (6-120)||(25213871-25213985)
chr7 (265-331)||(26399082-26399148)
chr7 (265-331)||(40051090-40051156)
chr7 (270-331)||(15886605-15886666)
chr7 (185-237)||(15218150-15218202)
chr7 (184-252)||(21001467-21001535)
chr7 (184-247)||(9434986-9435049)
chr7 (184-246)||(6876323-6876385)
chr7 (265-331)||(11097861-11097927)
chr7 (265-331)||(18421113-18421179)
chr7 (273-331)||(24736580-24736638)
chr7 (265-331)||(42867698-42867764)
chr7 (184-236)||(168657-168709)
chr7 (184-236)||(2714736-2714788)
chr7 (184-236)||(5687282-5687334)
chr7 (265-333)||(9435106-9435174)
chr7 (168-212)||(15886745-15886789)
chr7 (112-184)||(18420990-18421062)
chr7 (265-333)||(21001362-21001430)
chr7 (189-232)||(14125095-14125138)
chr7 (189-232)||(14428491-14428534)
chr7 (184-246)||(466082-466144)
chr7 (265-331)||(5687387-5687453)
chr7 (178-236)||(9161514-9161572)
chr7 (265-331)||(10560080-10560146)
chr7 (187-245)||(18421014-18421072)
chr7 (279-333)||(25209997-25210051)
chr7 (6-55)||(6876448-6876497)
chr7 (6-55)||(17959280-17959329)
chr7 (184-236)||(4213786-4213838)
chr7 (15-55)||(8619058-8619098)
chr7 (265-321)||(9161634-9161690)
chr7 (184-232)||(22090947-22090995)
[»] scaffold1216 (2 HSPs)
scaffold1216 (112-252)||(811-951)
scaffold1216 (265-331)||(991-1057)
[»] scaffold0017 (2 HSPs)
scaffold0017 (164-212)||(177293-177341)
scaffold0017 (268-331)||(177403-177466)
[»] scaffold0747 (2 HSPs)
scaffold0747 (265-331)||(4208-4274)
scaffold0747 (184-236)||(4082-4134)
[»] scaffold0906 (1 HSPs)
scaffold0906 (265-330)||(2860-2925)
[»] scaffold0739 (1 HSPs)
scaffold0739 (185-237)||(3899-3951)
[»] scaffold0010 (1 HSPs)
scaffold0010 (189-237)||(106907-106955)
[»] scaffold0005 (1 HSPs)
scaffold0005 (185-237)||(62988-63040)
[»] scaffold0454 (1 HSPs)
scaffold0454 (265-331)||(3144-3210)
[»] scaffold0133 (2 HSPs)
scaffold0133 (265-331)||(32985-33051)
scaffold0133 (95-181)||(41311-41397)
[»] scaffold0105 (1 HSPs)
scaffold0105 (265-331)||(45911-45977)
[»] scaffold0047 (2 HSPs)
scaffold0047 (265-331)||(45703-45769)
scaffold0047 (184-246)||(45806-45868)
[»] scaffold0014 (4 HSPs)
scaffold0014 (265-331)||(212536-212602)
scaffold0014 (265-331)||(218405-218471)
scaffold0014 (164-212)||(212414-212462)
scaffold0014 (164-212)||(218283-218331)
[»] scaffold0382 (1 HSPs)
scaffold0382 (185-237)||(9355-9407)
[»] scaffold0063 (1 HSPs)
scaffold0063 (185-237)||(16714-16766)
[»] scaffold0012 (2 HSPs)
scaffold0012 (185-237)||(21853-21905)
scaffold0012 (265-340)||(129615-129690)
[»] scaffold0185 (1 HSPs)
scaffold0185 (189-236)||(10961-11008)
[»] scaffold0497 (5 HSPs)
scaffold0497 (265-331)||(2163-2229)
scaffold0497 (138-188)||(2291-2341)
scaffold0497 (265-331)||(8467-8533)
scaffold0497 (187-245)||(8589-8647)
scaffold0497 (187-235)||(2295-2343)
[»] scaffold0194 (1 HSPs)
scaffold0194 (265-331)||(2494-2560)
[»] scaffold0085 (1 HSPs)
scaffold0085 (265-331)||(55780-55846)
[»] scaffold0015 (1 HSPs)
scaffold0015 (196-237)||(164375-164416)
[»] scaffold0410 (1 HSPs)
scaffold0410 (185-237)||(8372-8424)
[»] scaffold0247 (1 HSPs)
scaffold0247 (200-236)||(5142-5178)
[»] scaffold0207 (1 HSPs)
scaffold0207 (185-225)||(22314-22354)
[»] scaffold0485 (2 HSPs)
scaffold0485 (265-331)||(366-432)
scaffold0485 (95-176)||(503-584)
[»] scaffold0199 (1 HSPs)
scaffold0199 (286-331)||(20254-20299)
[»] scaffold0022 (1 HSPs)
scaffold0022 (150-223)||(51990-52063)
[»] scaffold0670 (1 HSPs)
scaffold0670 (185-237)||(2558-2610)


Alignment Details
Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 6 - 270
Target Start/End: Complemental strand, 14320147 - 14319883
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||||||| ||||||||||| || || ||||||||||||  |||| ||||   ||| ||||||| ||||||| |||||||||| | ||| | |||||    
T  14320147 tgagatgaagaaggttggtcagaggcagtgtgttgttcaggaatagtttgattttgagtaggtgattggttaaggttttctgtttgttgttcagtgttag 14320048  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    | || |||   |||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  14320047 gttgcggtaagtcagaggtagtttgttgttggtcagaaacaatgtgttcagaaacaggtttttcaggaacactttgttcttggtcagaagcaacttgttc 14319948  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||  | |||||||| |||||    
T  14319947 aggaacaataagtttaggaacaatttgctcaaggacggtttgagtttcagtttgggggtttgttt 14319883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 11215220 - 11214986
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||       ||||  ||||     ||||| |||||    
T  11215220 tgagatgtagaaggttggtcagaagctgtttgttgttcaggagaagctagattgatggttggtgattct-----ggttgttgttg----ttctgtgttag 11215130  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    |||||||||||||||||||||||||||| |   ||||| ||||||||||| ||||| ||||||||||||||||||| | | ||||||||||| |||||||    
T  11215129 gctggggttgttcagtggtagtttgttggt---cagaagcaatgtgttcatgaacatgttgttcaggaacactttgctataggtcagaagcaccttgttc 11215033  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    | ||||| ||||||||||||||||||||||  ||| |||||||||||    
T  11215032 aagaacagtatgttcaggaacaatttgctctgggatggtttgagttt 11214986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 261
Target Start/End: Original strand, 13073548 - 13073676
Alignment:
Q  133 gttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  13073548 gttggtcagaaacaatgtgttcaggaacagtttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtaggttcaggaacaatttg 13073647  T
Q  233 ctcatggacggtttgagtttttggttggg 261  Q
    |||| ||||||||||||||| | ||||||    
T  13073648 ctcagggacggtttgagtttcttgttggg 13073676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 14256361 - 14256219
Alignment:
Q  128 ttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaaca 227  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||||    
T  14256361 ttgtggttggtcagaaacaatgtgttcaggaacagtttgttcaggaacactttgctcttggtcagaagtaacttgttcaggaacagtaggttcaggaaca 14256262  T
Q  228 atttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    ||||||||| ||||||||||||||| | |||||| || |||||    
T  14256261 atttgctcagggacggtttgagtttcttgttgggtgtttgttt 14256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 1792950 - 1792831
Alignment:
Q  133 gttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||| ||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  1792950 gttggtcagaaataatgtgttcagaaacagtttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtaggttcaggaacaatttg 1792851  T
Q  233 ctcatggacggtttgagttt 252  Q
    |||| |||||||||||||||    
T  1792850 ctcagggacggtttgagttt 1792831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 270
Target Start/End: Complemental strand, 7803022 - 7802859
Alignment:
Q  107 ctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttca 206  Q
    ||||||||||||  |||||||||| | |   ||||||| | | ||||||||||||| | ||||||||||| |||||||| ||||||||||||||||||||    
T  7803022 ctggggttgttctatggtagtttgatctaagtcagaaatagtctgttcaggaacagttggttcaggaacagtttgttctaggtcagaagcaacttgttca 7802923  T
Q  207 ggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    |||||| |||||||||||||| |||||||| ||| ||||||||||| || |||||  |||||||    
T  7802922 ggaacagtatgttcaggaacagtttgctcagggatggtttgagtttctgtttgggtttctgttt 7802859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 4406128 - 4406215
Alignment:
Q  165 tgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  4406128 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtaggttcaggaacaatttgctcagggacggtttgagttt 4406215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 29470285 - 29470155
Alignment:
Q  140 agaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatgg 239  Q
    ||||||||  ||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||| |     
T  29470285 agaaacaacctgttcaggaacagttggttcaggaacagtttgttcttggtcagaagcgacttgttcaggaacagtttgttcaggaacagtttgctcagga 29470186  T
Q  240 acggtttgagtttttggttgggggtctgttt 270  Q
    | ||||||||||| || |||||  |||||||    
T  29470185 atggtttgagtttctgtttgggtttctgttt 29470155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 9389641 - 9389562
Alignment:
Q  133 gttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaaca 212  Q
    ||||||||||| |||| |||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9389641 gttgttcagaagcaatatgttcaggaatagtttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 9389562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 15225265 - 15225170
Alignment:
Q  150 tgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||| | |||||||||||| |||||||| ||| ||||    
T  15225265 tgttcaggaacagtttgttcaggaacattttgctcttggtcagaagcaactagttcaggaacagtttgttcaggaacactttgctcagggaaggtt 15225170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 14256465 - 14256399
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14256465 tgagatgaagaaggttggtcagaagctgtttgttgttcaggagaagttagattgatggttggtgatt 14256399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 18844768 - 18844702
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18844768 tgagatgtagaaggttggtcagaagctgtttgttgttcaggagaagttagattgatggttggtgatt 18844702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 16669486 - 16669392
Alignment:
Q  138 tcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||||| |||| ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||||||||| |  ||||||||||| ||||    
T  16669486 tcagaagcaatttgttcaggaacagtttgttcatgaacattttgctctaggtcagaagcaacttgttcaggaacatttcgttcaggaacactttg 16669392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 4406264 - 4406324
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggtt 325  Q
    |||||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||    
T  4406264 ctgttttagaggcctttgtgggggttggttgcatttctcctcctagatgtttttctaggtt 4406324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 9389488 - 9389416
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtgatga 337  Q
    |||||||||||||||||||  | ||||||||| |||| ||||||||||||||||||||||| ||||| |||||    
T  9389488 ctgttttagaggcctttgttggggttggttgcatttctcctcctagatgtttttctaggttgtgaagagatga 9389416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 14319852 - 14319784
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||| || |||||||    
T  14319852 ctgttttagaggcctttgtgggggttggttgaatttcacctcctagatgtttttctagattgtgaagtg 14319784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 18008321 - 18008389
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    ||||||||||||| |||||| | ||||||| | |||||||||||||||||||||||||||| |||||||    
T  18008321 ctgttttagaggcttttgtgggggttggttacatttcacctcctagatgtttttctaggttgtgaagtg 18008389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 4406020 - 4406086
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||    
T  4406020 tgagatgtagaaggttggtcagaagttgtttgatgttcaggagaagttagattgatggttgatgatt 4406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 10635385 - 10635319
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||| |||||    
T  10635385 ctgtcttagaggcctttgtgggtgttggttgtctttcaccacctagatgtttttctaggttgtgaag 10635319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 12184312 - 12184378
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  12184312 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 12184378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 12247797 - 12247731
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||| |||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  12247797 ctgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 12247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 16669334 - 16669272
Alignment:
Q  269 tttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||| |||||    
T  16669334 tttagaggcctttgtgggggttggttgcatttcacctcctaaatgtttttctaggttgtgaag 16669272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 23759160 - 23759226
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  23759160 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 23759226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 6499339 - 6499278
Alignment:
Q  270 ttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  6499339 ttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 6499278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 14583177 - 14583237
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggtt 325  Q
    |||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||||    
T  14583177 ctgttttagaggcctttgtgggggttggttgcaattcacctcctaaatgtttttctaggtt 14583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 17963402 - 17963462
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggtt 325  Q
    ||||||||||||| |||||| | ||||||| | ||||||||||||||||||||||||||||    
T  17963402 ctgttttagaggcttttgtgggggttggttacatttcacctcctagatgtttttctaggtt 17963462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 15835157 - 15835204
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  15835157 ttggtcagaagcaacttgttcaggaacaacatgttcaggaacattttg 15835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 1055756 - 1055822
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  |||||||| || | ||||||||||  ||||||||||||||||||||    
T  1055756 ctgttttagaggcctttgtaggtgttggtcgcatctcacctcctaagtgtttttctaggttatgaag 1055822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 4745585 - 4745651
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  4745585 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 4745651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 5512532 - 5512598
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  5512532 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 5512598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 5545991 - 5545925
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  5545991 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 5545925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 5626353 - 5626287
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  5626353 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 5626287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 5874662 - 5874596
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  5874662 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 5874596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 11214937 - 11214871
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  11214937 ctgttttaaaggcctttgtaggtgttggttgcatttcaccacctagatgtttttctacgttgtgaag 11214871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 13381741 - 13381679
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| |||||||||||||||||||||||| | |||||||||||| |||||||| ||| |||||    
T  13381741 cttgttcagaagcaacttgttcaggaacagtttgttcaggaacagtttgctcagggatggttt 13381679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 13392335 - 13392273
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| |||||||||||||||||||||||| | |||||||||||| |||||||| ||| |||||    
T  13392335 cttgttcagaagcaacttgttcaggaacagtttgttcaggaacagtttgctcagggatggttt 13392273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 14256188 - 14256122
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||| | ||||||||| |||  ||||||| ||||||||||||||| |||||    
T  14256188 ctgttttagaggcctttgtgggagttggttgcatttttcctcctaaatgtttttctaggttgtgaag 14256122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 16428128 - 16428062
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  16428128 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 16428062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 28323217 - 28323151
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  28323217 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 28323151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 38196627 - 38196693
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  38196627 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 38196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 39373942 - 39374008
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  39373942 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 39374008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 41685530 - 41685596
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  41685530 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 41685596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 1792779 - 1792714
Alignment:
Q  268 ttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    ||||||||||||||||| | ||||||||| |||| |||||||  |||||||||||||| |||||||    
T  1792779 ttttagaggcctttgtgggggttggttgcatttctcctcctaagtgtttttctaggttgtgaagtg 1792714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 15192507 - 15192430
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcagg 172  Q
    ||||| |||||| ||||||||||| ||||||||||||| | | ||||||||||  ||||||||||||| ||| |||||    
T  15192507 ttctgtgttaggatggggttgttctgtggtagtttgttctaggtcagaaacaacctgttcaggaacagtttgctcagg 15192430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 15225128 - 15225063
Alignment:
Q  266 tgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||||||||||||||||  | ||||||||| | ||||||||||  ||||||||||||||||||||    
T  15225128 tgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaag 15225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 9389735 - 9389666
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcagga---gaagttagattgatagttggtgatt 72  Q
    ||||||| ||| ||||||||||||| ||||||| ||||||||   |||||||||||||| ||||||||||    
T  9389735 tgagatgtagaaggttggtcagaagttgtttgtggttcaggagaagaagttagattgatggttggtgatt 9389666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 16669597 - 16669490
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||||||| |||||||||||||| || ||||| ||||||  |||| ||||   ||||||||| | ||||||  |||||||||| | ||||| |||||    
T  16669597 tgagatgaagaaggttggtcagaagcagtgtgttgctcaggaatagtttgattctgagttggtgaatggttaagattttctgtttgttgttctgtgttag 16669498  T
Q  106 gctggggt 113  Q
    | ||||||    
T  16669497 gttggggt 16669490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 6219123 - 6219061
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| |||||||| ||| |||||    
T  6219123 cttgttcagaagcagcttgttcaggaacagtttgttcaggaacagtttgctcagggatggttt 6219061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 8776545 - 8776611
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  8776545 ctgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 8776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 9004815 - 9004757
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    |||||||  |||||| |||||||||| |||||||||||||| |||||||| ||||||||    
T  9004815 ggtcagagacaactttttcaggaacagtatgttcaggaacactttgctcagggacggtt 9004757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 12295160 - 12295094
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||| | |||||||||||||||| ||| |||||    
T  12295160 ctgtcttagaggccttagtgggtgttggttgcatttcatcacctagatgtttttctaagttgtgaag 12295094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 18008137 - 18008183
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||    
T  18008137 tcagaagcaacttgttcaggaacaggttgttcaggaacaatttgctc 18008183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 18485878 - 18485944
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  18485878 ctgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 18485944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 24392464 - 24392406
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  24392464 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 24392406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 24661744 - 24661802
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  24661744 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 24661802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 9992280 - 9992212
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcac--ctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||  | |||||||||||||||| ||| |||||    
T  9992280 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacacctagatgtttttctaagttgtgaag 9992212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 17908492 - 17908411
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaaca 176  Q
    ||||| ||||| ||||||||||||  |||||||||| | | | ||||||||| | ||||||||||||| | |||||||||||    
T  17908492 ttctgtgttagtctggggttgttctatggtagtttgatctagatcagaaacagtctgttcaggaacagttggttcaggaaca 17908411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 13123477 - 13123529
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  13123477 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 13123529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 14467403 - 14467455
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  14467403 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 14467455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 18008135 - 18008187
Alignment:
Q  136 gttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttgg 188  Q
    |||||||| |||  ||||||||||||||||||||||||||| |||| ||||||    
T  18008135 gttcagaagcaacttgttcaggaacaggttgttcaggaacaatttgctcttgg 18008187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 23759046 - 23759098
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  23759046 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 23759098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 37868223 - 37868291
Alignment:
Q  178 tttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||||| ||||||||||||||||||||||| | ||   |||||||||||| |||||||| ||| |||||    
T  37868223 tttgttgttggtcagaagcaacttgttcagaagcagcttgttcaggaacagtttgctcagggatggttt 37868291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 37876741 - 37876809
Alignment:
Q  178 tttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||||| ||||||||||||||||||||||| | ||   |||||||||||| |||||||| ||| |||||    
T  37876741 tttgttgttggtcagaagcaacttgttcagaagcagcttgttcaggaacagtttgctcagggatggttt 37876809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 1055619 - 1055690
Alignment:
Q  164 ttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    ||||||||||||| |||  |||||||||||| ||||||||| |||||||   | |||||||||| |||||||    
T  1055619 ttgttcaggaacattttactcttggtcagaaacaacttgtttaggaacagcttattcaggaacactttgctc 1055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 6219024 - 6218958
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| ||||  ||||||||||  ||||||||    
T  6219024 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaagtgtttttctaaattatgaag 6218958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 9004716 - 9004662
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttc 319  Q
    ||||||||||||||||||||   ||||||||| |||||||||||| ||| |||||    
T  9004716 ctgttttagaggcctttgtggaggttggttgcatttcacctcctaaatgcttttc 9004662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 29470124 - 29470058
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||| |||||||||| |||||    
T  29470124 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtctttctaggttgtgaag 29470058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 37876846 - 37876912
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  37876846 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 37876912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 13123353 - 13123402
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  13123353 tgagatgtggagggttggtcagaggctgtttgttggtcagaagaagttag 13123402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 14467279 - 14467328
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  14467279 tgagatgtggagggttggtcagaggctgtttgttggtcagaagaagttag 14467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 16389870 - 16389810
Alignment:
Q  265 ctgttttagaggcctttgtgag-tgttggttgcgtttcacctcctagatgtttttctaggtt 325  Q
    |||| |||||||||||| |||| ||| |||||| ||||||| ||||||||||||||||||||    
T  16389870 ctgtcttagaggccttt-tgaggtgtaggttgcatttcaccacctagatgtttttctaggtt 16389810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 13381642 - 13381586
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||  ||||||||||| ||||||| ||||  ||||||||||    
T  13381642 ctgtcttagaggcctttgttggtgttggttgcatttcaccacctaagtgtttttcta 13381586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 13392236 - 13392180
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||  ||||||||||| ||||||| ||||  ||||||||||    
T  13392236 ctgtcttagaggcctttgttggtgttggttgcatttcaccacctaagtgtttttcta 13392180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 15192371 - 15192315
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| |||||||    
T  15192371 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccgcctaaatgcttttcta 15192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 15225279 - 15225231
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    ||||||| ||||| |||||||||||| | |||||||||||| |||||||    
T  15225279 ggtcagaggcaacctgttcaggaacagtttgttcaggaacattttgctc 15225231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 16656984 - 16656940
Alignment:
Q  132 tgttgttcagaaacaatgtgttcaggaacaggttgttcaggaaca 176  Q
    |||||||||| |||||| |||||| |||||| |||||||||||||    
T  16656984 tgttgttcaggaacaatttgttcatgaacagtttgttcaggaaca 16656940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 16669488 - 16669440
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    |||||||||||| ||||||||||||| | |||||| ||||| |||||||    
T  16669488 ggtcagaagcaatttgttcaggaacagtttgttcatgaacattttgctc 16669440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 19780173 - 19780225
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| ||||||||    
T  19780173 cttgttcagaagcagcttgttcaggaacagtttgctcaggaacagtttgctca 19780225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 37868328 - 37868384
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||    
T  37868328 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 37868384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 7e-68; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 6 - 270
Target Start/End: Original strand, 26868753 - 26869014
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||| |||||||||||||||||| | ||||||| |||    
T  26868753 tgagatgtagaaggttggtcagaagctgtgtgttgttcaggtgaagtttgattgttagttggtgattggttaagggtttctgtttgttgttctgggatag 26868852  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    | |||||| | |||| || | |   |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||    
T  26868853 gttggggtaggtcagaggcaat---ttgttggtcagaagcaatgtgttcaggaacatgttgttcaggaacactttgttctaggttagaagcaccttgttc 26868949  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    ||||||| ||||||||||||||||||||||  ||| |||||||||||  | |||||||| |||||    
T  26868950 aggaacagtatgttcaggaacaatttgctctgggatggtttgagtttcagtttgggggtttgttt 26869014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 28378348 - 28378106
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgat-tagttaagggtttctgtttgattttctgggtta 104  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| || | | |||   |  ||||| |||   ||||| ||||    
T  28378348 tgagatgtagaaggttggtcagaagctgtttgttgttcaggagaagttagattgatggttgttgttcttgttgttg--ttctggttg---ttctgagtta 28378254  T
Q  105 ggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgtt 204  Q
    || |||||| | |||| |  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28378253 ggttggggtaggtcagagacagtttgttgttggtcagaaacaatgtgttcaggaacaggttgttcaggaacactttgctcttggtcagaagcaacttgtt 28378154  T
Q  205 caggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    |||||||| || |||||||||||||||||||| |||||||||||||||    
T  28378153 caggaacagtaggttcaggaacaatttgctcagggacggtttgagttt 28378106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 24424021 - 24423821
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| |||||||||||||||||||||||||||||||  ||||  ||||| ||||||||||       ||||  |||| | | ||||| |||||    
T  24424021 tgagatgtagaaggttggtcagaagctgtttgttgttcaggagtggttaagttgatggttggtgattct-----ggttgttgtt-gttgttctgtgttag 24423928  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  24423927 gctggggttgttcagtggtagtttgttgttgttcagaaacattgtgttcaggaacagattgttcaggaacactttgttcttggtcagaagcaacttgttt 24423828  T
Q  206 aggaaca 212  Q
    |||||||    
T  24423827 aggaaca 24423821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 21170915 - 21170792
Alignment:
Q  113 ttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaaca 212  Q
    |||||| ||| ||||||||||||| | ||||||| |||||||| |||||| |||||||| | ||| ||||||||||||||||||||| ||||||||||||    
T  21170915 ttgttctgtgttagtttgttgttggttagaaacattgtgttcatgaacagattgttcagaagcaccttgttcttggtcagaagcaacctgttcaggaaca 21170816  T
Q  213 atatgttcaggaacaatttgctca 236  Q
    || |||||||||||| ||||||||    
T  21170815 atttgttcaggaacagtttgctca 21170792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 20416192 - 20415973
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||  ||||     ||||| |||||    
T  20416192 tgagatgtagaaggttggtcagaagctgtttgttgttcaggagaagttagattgatggttggtgattct-----ggttgttgttg----ttctgtgttag 20416102  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    |||||||||||||||||||||||||||| |   ||||| |||||||||||||||||               ||||| ||| ||||||||||| |||||||    
T  20416101 gctggggttgttcagtggtagtttgttggt---cagaagcaatgtgttcaggaaca---------------ctttgctctaggtcagaagcaccttgttc 20416020  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    | ||||| ||||||||||||||||||||||  ||| |||||||||||    
T  20416019 atgaacagtatgttcaggaacaatttgctctgggatggtttgagttt 20415973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 28730370 - 28730242
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaa 194  Q
    ||||| |||||| ||||||||||| ||||||||||||||||| | ||||||| ||| |||| |||||  |||||||| | ||| ||||||||||||||||    
T  28730370 ttctgtgttaggttggggttgttctgtggtagtttgttgttggttagaaacattgtattcatgaacatattgttcagaagcaccttgttcttggtcagaa 28730271  T
Q  195 gcaacttgttcaggaacaatatgttcagg 223  Q
     |||| |||||||||||| | ||||||||    
T  28730270 acaacctgttcaggaacagtttgttcagg 28730242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 26869045 - 26869113
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||| |||||||    
T  26869045 ctgttttagaggcctttgtgggtgttggtttcatttcacctcctagatgtttttctaggttgtgaagtg 26869113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 28378057 - 28377989
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| | ||||||||| |||| ||||||| ||||||||||||||| |||||||    
T  28378057 ctgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttctaggttgtgaagtg 28377989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 9771735 - 9771669
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  9771735 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 9771669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 9906558 - 9906492
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||| |||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  9906558 ctgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 9906492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 22765634 - 22765700
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||| |||||    
T  22765634 ctgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttctaggttgtgaag 22765700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 24423748 - 24423682
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||| |||||    
T  24423748 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaaatgtttttctaggttgtgaag 24423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 20415924 - 20415856
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| ||||| |||||   ||| |||||||||||||||||||||| |||||||    
T  20415924 ctgttttagaggcctttgtgggtgttagttgcacctcaactcctagatgtttttctaggttgtgaagtg 20415856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 10268808 - 10268874
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  10268808 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 10268874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 11403849 - 11403783
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  11403849 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 11403783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 21170730 - 21170664
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||| |||| |||||||||| |||||    
T  21170730 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaaatgtctttctaggttgtgaag 21170664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27223243 - 27223309
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  27223243 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 27223309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 28730182 - 28730116
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||||||| |||||    
T  28730182 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaggttgtgaag 28730116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 35254828 - 35254886
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  35254828 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 35254886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 35265437 - 35265495
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  35265437 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 35265495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 43347219 - 43347285
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  43347219 ctgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 43347285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 29245952 - 29246004
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  29245952 cttgttcagaagcagcttgttcaggaacagtttgttcaggaacagtttgctca 29246004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 34799211 - 34799155
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||    
T  34799211 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttcta 34799155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 40224132 - 40224188
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||    
T  40224132 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttcta 40224188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 21171004 - 21170962
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggag 48  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||    
T  21171004 tgagatgtagaaggttggtcagaagctgtttgatgttcaggag 21170962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 29246057 - 29246123
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  29246057 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 29246123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 43084520 - 43084586
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  43084520 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 43084586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 4211651 - 4211703
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||| ||||| ||||||||    
T  4211651 cttgttcagaagcatcttgttcaggaacagtttgttcaagaacagtttgctca 4211703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 9771834 - 9771782
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||| ||||| ||||||||    
T  9771834 cttgttcagaagcatcttgttcaggaacagtttgttcatgaacagtttgctca 9771782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 22958806 - 22958754
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| ||||||||    
T  22958806 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacattttgctca 22958754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 24336855 - 24336803
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||| ||||| ||||||||    
T  24336855 cttgttcagaagcagcttgttcaggaacagtttgttcaagaacagtttgctca 24336803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 6 - 270
Target Start/End: Original strand, 13914795 - 13915059
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||||||| |||| |||||| || || ||||| |||||   |||| ||||   ||||||||| | ||||||  |||||| ||| | ||||| |||||    
T  13914795 tgagatgaagaaggtttgtcagaggcagtgtgttgctcagggatagtttgattttgagttggtgagtggttaagattttctggttgttgttctgtgttag 13914894  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    | || ||| | |||| || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  13914895 gttgaggtaggtcagaggcagtttgttgttggtcagaaacaatgtgttcaggaacaggttgttctggaacactttgctcttggtcagaagcaacttgttc 13914994  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||  | |||||||| |||||    
T  13914995 aggaacagtaagttcaggaacaatttgctcagggacggtttgagtttcagtttgggggtttgttt 13915059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 6 - 270
Target Start/End: Complemental strand, 18924587 - 18924335
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||       ||||  ||||     ||||| |||||    
T  18924587 tgagatgtagaaggttggtcagaagctgtttgatgttcaggagaagttagattgatggttggtgattct-----ggttgttgttg----ttctgtgttag 18924497  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
     ||||| |||||||| ||||||||| || |   ||||   |||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||    
T  18924496 actgggattgttcagaggtagtttgctggt---cagaggaaatgtgttcaggaacatgttgttcaggaacactttgctctaggtcagaagcaccttgttc 18924400  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    ||||||| ||||||||||||||||||||||  ||| |||||||||||  | |||||| |||||||    
T  18924399 aggaacagtatgttcaggaacaatttgctctgggatggtttgagtttcagtttggggttctgttt 18924335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 22287726 - 22287827
Alignment:
Q  134 ttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgc 233  Q
    |||||||| |||| | ||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||  ||||| | |||||||||||| |||||    
T  22287726 ttgttcaggaacagtttgttcaggaacagtttgttcaggaacactttgctcttggtcagaagtaacttgttcgagaacagtttgttcaggaacattttgc 22287825  T
Q  234 tc 235  Q
    ||    
T  22287826 tc 22287827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 20059025 - 20058908
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaa 194  Q
    ||||| ||||| || |||||||||  |||||||||| | | | ||||||||| | ||||||| ||||| | ||||||||||| |||||||| ||||||||    
T  20059025 ttctgtgttagtctagggttgttctatggtagtttgatctaggtcagaaacagtatgttcagaaacagttggttcaggaacagtttgttctaggtcagaa 20058926  T
Q  195 gcaacttgttcaggaaca 212  Q
    ||||||||||||||||||    
T  20058925 gcaacttgttcaggaaca 20058908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 17044578 - 17044646
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||| |||||||    
T  17044578 ctgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgtttttctaggttgtgaagtg 17044646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 18924304 - 18924236
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  18924304 ctgttttagaggcctttgtaggtgttggttgcatttcacctccaagatgtttttctaggttgtgaagtg 18924236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 25795738 - 25795806
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||| ||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||| |||||||    
T  25795738 ctgtcttagaggcctttgtgggtgttggttgcatttctcctcctaggtgtttttctaggttgtgaagtg 25795806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 9121451 - 9121385
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||| |||||    
T  9121451 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaaatgtttttctaggttgtgaag 9121385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 18833241 - 18833175
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  | |||| |||| |||||||||||| |||||||||||||||||||||    
T  18833241 ctgttttagaggcctttgtaggggttgattgcatttcacctcctaaatgtttttctaggttatgaag 18833175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 22287893 - 22287959
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  | ||||||||| | |||||||||| |||||||||||||||||||||    
T  22287893 ctgttttagaggcctttgtaggggttggttgcatctcacctcctaaatgtttttctaggttatgaag 22287959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 25684928 - 25684862
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||| |||||    
T  25684928 ctgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttctaggttgtgaag 25684862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 25733744 - 25733678
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||| |||||    
T  25733744 ctgttttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttctaggttgtgaag 25733678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 26866618 - 26866684
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  26866618 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 26866684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27374630 - 27374696
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| |||||    
T  27374630 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacatagatgtttttctaggttgtgaag 27374696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27464987 - 27465053
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| |||||    
T  27464987 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacatagatgtttttctaggttgtgaag 27465053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 13915090 - 13915154
Alignment:
Q  265 ctgttttagaggcctttgtgagtg-ttggttgcgtttcacctcctagatgtttttctaggttatg 328  Q
    |||||||||||||||||||| | | |||||||| |||||||||||| ||||||||||||||||||    
T  13915090 ctgttttagaggcctttgtggggggttggttgcatttcacctcctaaatgtttttctaggttatg 13915154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 4632736 - 4632802
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  4632736 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 4632802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 12725833 - 12725767
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  12725833 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 12725767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 16932217 - 16932283
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  16932217 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 16932283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 25789536 - 25789602
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  25789536 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 25789602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27343553 - 27343619
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  27343553 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 27343619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27404293 - 27404359
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  27404293 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 27404359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 32310041 - 32309975
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  32310041 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 32309975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 27386265 - 27386330
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    |||| |||||||||||| || ||||||||||| ||||||| |||||||||||||||| ||| ||||    
T  27386265 ctgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaa 27386330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 27476678 - 27476743
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    |||| |||||||||||| || ||||||||||| ||||||| |||||||||||||||| ||| ||||    
T  27476678 ctgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaa 27476743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 19460391 - 19460343
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  19460391 tcagaagcaacttgttcaggaacaacaagttcaggaacagtttgctcat 19460343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 26027235 - 26027293
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  26027235 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 26027293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 25733843 - 25733794
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||||||  ||||||||||||||||| |||||||||||||| ||||||||    
T  25733843 ggtcagagacaacttgttcaggaacagtatgttcaggaacactttgctca 25733794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 12856754 - 12856810
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||    
T  12856754 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttcta 12856810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 27386164 - 27386240
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttggg 261  Q
    |||||||| ||||||||||||||||||||  ||||||| |||| |||||||| | | |||||| |||| || |||||    
T  27386164 ttggtcaggagcaacttgttcaggaacaacttgttcagaaacagtttgctcaggaatggtttgggtttctgtttggg 27386240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 27476577 - 27476653
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttggg 261  Q
    |||||||| ||||||||||||||||||||  ||||||| |||| |||||||| | | |||||| |||| || |||||    
T  27476577 ttggtcaggagcaacttgttcaggaacaacttgttcagaaacagtttgctcaggaatggtttgggtttctgtttggg 27476653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 34816258 - 34816206
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  34816258 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 34816206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 25795560 - 25795617
Alignment:
Q  18 ggttggtcagaagctgtttgttgttcagg---agaagttagattgatagttggtgatt 72  Q
    ||||||||| ||||||||||| |||||||   ||||||||||||||| ||||||||||    
T  25795560 ggttggtcataagctgtttgtggttcaggagaagaagttagattgatggttggtgatt 25795617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 3663227 - 3663293
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| ||||  |||||||||| ||| |||||    
T  3663227 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctaagtgtttttctaagttgtgaag 3663293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 12359974 - 12360040
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  12359974 ctgtcttagaggcctttgttggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 12360040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 18833338 - 18833292
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    ||||| |||||||||||||||||| | |||||||||||| |||||||    
T  18833338 tcagaggcaacttgttcaggaacagtttgttcaggaacattttgctc 18833292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 22287713 - 22287758
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    ||||||| |||||||||||||||||| | |||||||||||| ||||    
T  22287713 ggtcagaggcaacttgttcaggaacagtttgttcaggaacagtttg 22287758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 25685043 - 25685010
Alignment:
Q  150 tgttcaggaacaggttgttcaggaacactttgtt 183  Q
    ||||||||||||| ||||||||||||||||||||    
T  25685043 tgttcaggaacagattgttcaggaacactttgtt 25685010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 27374524 - 27374593
Alignment:
Q  183 tcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    |||||||||| |||||||||||||| |||| | |||||  ||||| |||||||| ||| |||||| ||||    
T  27374524 tcttggtcagtagcaacttgttcagaaacagtttgttccagaacagtttgctcagggatggtttgggttt 27374593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 27464881 - 27464950
Alignment:
Q  183 tcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    |||||||||| |||||||||||||| |||| | |||||  ||||| |||||||| ||| |||||| ||||    
T  27464881 tcttggtcagtagcaacttgttcagaaacagtttgttccagaacagtttgctcagggatggtttgggttt 27464950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 9121572 - 9121508
Alignment:
Q  183 tcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttg 247  Q
    ||||||||||||||||||||||||| | || | |||||  ||||| |||||||| ||| ||||||    
T  9121572 tcttggtcagaagcaacttgttcagaagcagtttgttcctgaacagtttgctcagggatggtttg 9121508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 20048934 - 20048878
Alignment:
Q  214 tatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    |||||||||||||| |||||||| ||| ||||||||||| || |||||  |||||||    
T  20048934 tatgttcaggaacagtttgctcagggatggtttgagtttctgtttgggtttctgttt 20048878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 115; Significance: 2e-58; HSPs: 4)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 1621 - 1375
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||  || | ||| |  |||||||||   ||||||  |||||| ||| | ||||  |||||    
T  1621 tgagatgaagaaggttggtcagaagcagtttgttgctcaagaataggttgatggtgagttggtgaaaggttaagattttctggttgttgttctaagttag 1522  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    | |||||| | |||| || ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1521 gttggggtaggtcagaggcagtttgttggtggtcagaaacaatgttttcaggaacaggttgttcaggaacactttgctcttggtcagaagcaacttgttc 1422  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||    
T  1421 aggaacagtaggttcaggaacaatttgctcagggacggtttgagttt 1375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 5652 - 5406
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||  || | ||| |  |||||||||   ||||||  |||||| ||| | ||||  |||||    
T  5652 tgagatgaagaaggttggtcagaagcagtttgttgctcaagaataggttgatggtgagttggtgaaaggttaagattttctggttgttgttctaagttag 5553  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    | |||||| | |||| || ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5552 gttggggtaggtcagaggcagtttgttggtggtcagaaacaatgttttcaggaacaggttgttcaggaacactttgctcttggtcagaagcaacttgttc 5453  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||    
T  5452 aggaacagtaggttcaggaacaatttgctcagggacggtttgagttt 5406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 1326 - 1270
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||||||||||||||||||| | ||||||||| |||| ||||||| |||||||||||    
T  1326 ctgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttcta 1270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 5357 - 5301
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||||||||||||||||||| | ||||||||| |||| ||||||| |||||||||||    
T  5357 ctgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttcta 5301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 15205929 - 15205711
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| ||||||||||||||||| ||||||||| | |||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  15205929 tgagatgtagaaggttggtcagaagctgtgtgttgttcacgtgaagtttgattgttagttggtgattggttaagggtttctgtttgattttctgtgttag 15205830  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    | |||||| | |||| || |   | ||| || |||||| |||||||||||||||||  |||||||| ||||||||||||| ||||||||||| |||||||    
T  15205829 gttggggtaggtcagaggca---ttttgctggtcagaagcaatgtgttcaggaacattttgttcagaaacactttgttctaggtcagaagcaccttgttc 15205733  T
Q  206 aggaacaatatgttcaggaaca 227  Q
    ||||||| ||||||||||||||    
T  15205732 aggaacagtatgttcaggaaca 15205711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 11537770 - 11537865
Alignment:
Q  150 tgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  11537770 tgttcaggaacagtttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtatgttcaggaacaatttgctcagggacggtt 11537865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 16306875 - 16307109
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| |||||||||||||||||||| |||||||| ||||||||||  || ||||||||||       ||||     ||| | ||||  |||||    
T  16306875 tgagatgtagaaggttggtcagaagctgtttgatgttcaggtgaagttagatctatggttggtgattct-----ggttg----ttggtgttctatgttag 16306965  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    |||||| |||||||| ||||||||| || |   ||||  |||||||||||||||||| ||||| |||||||||||| ||||| |||||| ||||||||||    
T  16306966 gctgggattgttcagaggtagtttgctggt---cagaggcaatgtgttcaggaacagtttgtttaggaacactttgctcttgatcagaatcaacttgttc 16307062  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||||| || ||||||||||| |||||| | |||||||||||||||    
T  16307063 aggaacagtaggttcaggaacagtttgcttagggacggtttgagttt 16307109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 3374674 - 3374777
Alignment:
Q  133 gttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| |  ||||||||||||||||    
T  3374674 gttgttcagaagcaatgtgttcaggaacagtttgttcaggaacactttgctcttgatcagatgcaacttgttcaggaacagtgggttcaggaacaatttg 3374773  T
Q  233 ctca 236  Q
    ||||    
T  3374774 ctca 3374777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 19572842 - 19572929
Alignment:
Q  165 tgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  19572842 tgttcaggaacattttgctcttggtcagaagcaacttgttcaggaacagtaggttcaggaacaatttgctcagggacggtttgagttt 19572929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 15205622 - 15205554
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||||    
T  15205622 ctgttttagaggcctttgtgggtgttggttgcatttcacctcctagatgtttttctagattgtgaagtg 15205554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 10292432 - 10292539
Alignment:
Q  138 tcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||  |||||| |||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||   |||||| ||||| ||||||||     
T  10292432 tcagaaacaacctgttcaagaacagtttgttcaggaacattttgctcttggacagaagcaacttgttcaggaacagcttgttcacgaacactttgctcag 10292531  T
Q  238 ggacggtt 245  Q
     |||||||    
T  10292532 agacggtt 10292539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 19572743 - 19572809
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  19572743 tgagatgtagaaggttggtcagaagctgtttgatgttcaggagaagttagattgatggttggtgatt 19572809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 10292580 - 10292646
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||| |||||    
T  10292580 ctgttttagaggcctttgtgggggttggttgcatttcacctcctaggtgtttttctaggttgtgaag 10292646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 39519216 - 39519135
Alignment:
Q  164 ttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||| |||| | |||||||||||| |||||||| ||| ||||    
T  39519216 ttgttcaggaacattttgctcttggtcaaaagcaacttgttcagaaacagtttgttcaggaacactttgctcagggatggtt 39519135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 11537909 - 11537981
Alignment:
Q  268 ttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtgatgatgt 340  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||| ||||| | ||||||    
T  11537909 ttttagaggcctttgtgggggttggttgcatttcacctcctaaatgtttttctaggttgtgaagggttgatgt 11537981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 19572979 - 19573046
Alignment:
Q  266 tgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||| |||||||| | ||||||||| |||| ||||||||||||||||||||||| |||||||    
T  19572979 tgttttagagacctttgtgggggttggttgcatttctcctcctagatgtttttctaggttgtgaagtg 19573046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 4996796 - 4996730
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||| |||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  4996796 ctgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 4996730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 21998297 - 21998363
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  21998297 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 21998363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 30935465 - 30935399
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  30935465 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 30935399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 452442 - 452507
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| ||||    
T  452442 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaa 452507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 14776742 - 14776690
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  14776742 ttggtcagaagcaacttgttcaggaacaacaagttcaggaacagtttgctcat 14776690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 40469107 - 40469007
Alignment:
Q  112 gttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaac 211  Q
    ||||||| || || ||||||||||| ||||| ||||  |||||| |||||| |||||||| | ||| | | ||||||||||||||||| |||||||||||    
T  40469107 gttgttctgttgttgtttgttgttggtcagagacaagatgttcatgaacagattgttcagaagcacctagctcttggtcagaagcaacctgttcaggaac 40469008  T
Q  212 a 212  Q
    |    
T  40469007 a 40469007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 3374586 - 3374652
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||| |||||||  || ||||||||||    
T  3374586 tgagatgtagaaggttggtcagaagttgtttgttgttcaggagaggttagatcaattgttggtgatt 3374652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 24642193 - 24642259
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  24642193 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 24642259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27658484 - 27658550
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  27658484 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 27658550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 36020171 - 36020237
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  36020171 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 36020237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 39519094 - 39519028
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||| ||||||||||||  ||||||||||| | ||||||||||  ||||||||||||||||||||    
T  39519094 ctgtttcagaggcctttgtaggtgttggttgcatctcacctcctaagtgtttttctaggttatgaag 39519028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 55754214 - 55754148
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  55754214 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 55754148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 11517083 - 11517148
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    |||||||||||||||||||  | ||||||||| | ||||||||||  |||||||||||||||||||    
T  11517083 ctgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaa 11517148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 10749564 - 10749506
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  10749564 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 10749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 10963333 - 10963275
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  10963333 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 10963275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 18761479 - 18761413
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||| ||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  18761479 ctgtcttagaggtcttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 18761413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 30935564 - 30935502
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||||||| |||||    
T  30935564 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacagtttgctcatggatggttt 30935502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 11516969 - 11517009
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaaca 227  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  11516969 ggtcagaagcaacttgttcaggaacagtttgttcaggaaca 11517009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 16257679 - 16257731
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  16257679 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 16257731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 17919884 - 17919936
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  17919884 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 17919936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 19953437 - 19953385
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  19953437 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 19953385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 16307158 - 16307224
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||||||||||| |||||| | ||||||||| |||  |||||||  |||||||||||||| |||||    
T  16307158 ctgttttagaggcttttgtgggggttggttgcatttttcctcctaagtgtttttctaggttgtgaag 16307224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 21998198 - 21998260
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||| ||| |||||    
T  21998198 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacagtttgctcagggatggttt 21998260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 24026523 - 24026461
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||| ||| |||||    
T  24026523 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacagtttgctcagggatggttt 24026461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 3374839 - 3374892
Alignment:
Q  268 ttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    ||||| ||||||||||| | ||||||||| |||| ||||||| |||||||||||    
T  3374839 ttttaaaggcctttgtgggggttggttgcatttctcctcctaaatgtttttcta 3374892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 24026632 - 24026583
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  24026632 tgagatgtggagggttggtcagaggctgtttgttggtcagaagaagttag 24026583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 11537756 - 11537804
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    |||||||  ||||||||||||||||| | |||||||||||| |||||||    
T  11537756 ggtcagagacaacttgttcaggaacagtttgttcaggaacactttgctc 11537804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 193670 - 193904
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||  ||||     ||||| |||||    
T  193670 tgagatgtagagggttggtcagaagctgtttgttgttcaggagaagttagattgatggttggtgattct-----ggttgttgttg----ttctgtgttag 193760  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
    |||||||||||||||||||||||||||| |   ||||  |||||||||||| |||| ||||||||||||||||||| ||| ||| ||||||| |||||||    
T  193761 gctggggttgttcagtggtagtttgttggt---cagaggcaatgtgttcagaaacatgttgttcaggaacactttgctctaggttagaagcaccttgttc 193857  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||||| ||||||||| ||||||||||||  ||| |||||||||||    
T  193858 aggaacagtatgttcagaaacaatttgctctgggatggtttgagttt 193904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 193953 - 194021
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| | |||||||    
T  193953 ctgttttagaggcctttgtaggtgttggttgcatttcacctcctagatgtttttctaggctgtgaagtg 194021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 99; Significance: 8e-49; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 111 - 339
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||            ||||| ||| | |||||| | ||    
T  111 tgagatgtagaaggttggtcagaagctgtttgttgttcaggagaagttagattgatggttggtga------------ttctggttgttgttctggttgag 198  T
Q  106 gctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttc 205  Q
       ||      |||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  199 atagg------tcagaggcagtttgttgttggttagaaacaatgtgttcaggaacaggttgttcaggaacactctgctcttggtcagaagcaacttgttc 292  T
Q  206 aggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||||| || ||||||||| |||||||||| |||||||||||||||    
T  293 aggaacagtaggttcaggaataatttgctcagggacggtttgagttt 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 388 - 456
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| | ||||||||| |||| |||||||  |||||||||||||| |||||||    
T  388 ctgttttagaggcctttgtgggggttggttgcatttctcctcctaagtgtttttctaggttgtgaagtg 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 8e-49; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 128 - 270
Target Start/End: Original strand, 18155562 - 18155704
Alignment:
Q  128 ttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaaca 227  Q
    |||| |||| ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  18155562 ttgtggttggtcagaaacaatgtattcaggaacagtttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtaggttcaggaaca 18155661  T
Q  228 atttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    ||||||||| ||||||||||||||| |||||||| || |||||    
T  18155662 atttgctcagggacggtttgagtttctggttgggtgtttgttt 18155704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 101 - 212
Target Start/End: Complemental strand, 23467913 - 23467802
Alignment:
Q  101 gttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaact 200  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||| |||||| | |||||| |||||||| ||||| ||||||||||||||||||||||    
T  23467913 gttaggctgggattgttcagtggtagtttgttcttggtcagaaacattgtgtttatgaacagattgttcagaaacacattgttcttggtcagaagcaact 23467814  T
Q  201 tgttcaggaaca 212  Q
    ||||||||||||    
T  23467813 tgttcaggaaca 23467802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 270
Target Start/End: Original strand, 19226678 - 19226838
Alignment:
Q  110 gggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcagga 209  Q
    ||||||||| ||||||||||| | | | |||||||||   ||||||||||||| | ||||||||||| |||||||| |||||||||||||||||||| ||    
T  19226678 gggttgttctgtggtagtttgatctaggtcagaaacagcctgttcaggaacagttggttcaggaacagtttgttctaggtcagaagcaacttgttcaaga 19226777  T
Q  210 acaatatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    ||| | |||||||||||| |||||||| ||| ||||||||||| || |||||  |||||||    
T  19226778 acagtttgttcaggaacagtttgctcagggatggtttgagtttctgtttgggtttctgttt 19226838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 30323758 - 30323673
Alignment:
Q  140 agaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaa 225  Q
    ||||||||  ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | || |||||||    
T  30323758 agaaacaacctgttcaggaacagttggttcaggaacagtttgttcttggtcagaagcaacttgttcaggaacagtttgctcaggaa 30323673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 18155476 - 18155542
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  18155476 tgagatgtagaaggttggtcagaagttgtttgttgttcaggagaagttagattgatggttggtgatt 18155542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 18155735 - 18155803
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  18155735 ctgttttagaggcttttgtgggtgttggttgcatttcacctcctagatatttttctaggttgtgaagtg 18155803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 3834655 - 3834707
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    |||||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  3834655 ttggtcagaagcaacttgttcaggaacagtttgttcaggaacactttgctcat 3834707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 17517535 - 17517483
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  17517535 ttggtcagaagcaacttgttcaggaacaacatgttcaggaacagttttctcat 17517483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 208585 - 208519
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  208585 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 208519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 722208 - 722142
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  722208 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 722142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 13686993 - 13686927
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  13686993 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 13686927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 29078580 - 29078646
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  29078580 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 29078646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 32086692 - 32086626
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  32086692 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 32086626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 44482972 - 44483038
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  44482972 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 44483038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 19130488 - 19130540
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||||||||||||    
T  19130488 cttgttcagaagcagcttgttcaggaacattttgttcaggaacaatttgctca 19130540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 243670 - 243736
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| || |||||||| ||||||| |||||||||||||||| ||| |||||    
T  243670 ctgtcttagaggccttagtgggttttggttgcatttcaccacctagatgtttttctaagttgtgaag 243736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 797040 - 797106
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| || |||||||| ||||||| |||||||||||||||| ||| |||||    
T  797040 ctgtcttagaggccttagtgggttttggttgcatttcaccacctagatgtttttctaagttgtgaag 797106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 3357632 - 3357574
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  3357632 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 3357574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 9342967 - 9343025
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  9342967 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 9343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 19226869 - 19226935
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  19226869 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 19226935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 19420287 - 19420353
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  19420287 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 19420353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 36079795 - 36079861
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  36079795 ctgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 36079861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 36294793 - 36294859
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||  |||||||||||||||| ||| |||||    
T  36294793 ctgtcttagaggccttagtgggtgttggttgcatttcactacctagatgtttttctaagttgtgaag 36294859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 6152859 - 6152911
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  6152859 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 6152911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 15765540 - 15765484
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||    
T  15765540 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttcta 15765484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 15765654 - 15765602
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  15765654 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 15765602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 15789677 - 15789621
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||    
T  15789677 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctaagtgtttttcta 15789621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 15789791 - 15789739
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  15789791 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 15789739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 23785264 - 23785311
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    ||||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  23785264 tcagaagcaacttgttcaggaacaacatgttccggaacagtttcctca 23785311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 19130593 - 19130659
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  19130593 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 19130659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 19420135 - 19420221
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttg 181  Q
    ||||| ||||| ||||||||||||  |||||||||| | | | |||||||||   ||||||||||||| | ||||||||||| ||||    
T  19420135 ttctgtgttagtctggggttgttctatggtagtttgatctaggtcagaaacagcctgttcaggaacagttggttcaggaacagtttg 19420221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 26113057 - 26113119
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||| ||| |||||    
T  26113057 cttgttcagaagcagcttgttcaggaacagtttgctcaggaacagtttgctcagggatggttt 26113119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 23372442 - 23372491
Alignment:
Q  186 tggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    ||||||||||||||||||||| ||||| | |||| ||||||| |||||||    
T  23372442 tggtcagaagcaacttgttcaagaacagtttgtttaggaacactttgctc 23372491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 26113156 - 26113212
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||    
T  26113156 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 26113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 17448408 - 17448545
Alignment:
Q  133 gttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  17448408 gttggtcagaaacaatgtgttcaggaacagtttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtaggttcaggaacaatttg 17448507  T
Q  233 ctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    |||| ||||||||||||||| | |||||| || |||||    
T  17448508 ctcagggacggtttgagtttcttgttgggtgtttgttt 17448545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 133 - 270
Target Start/End: Complemental strand, 34061134 - 34060997
Alignment:
Q  133 gttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  34061134 gttgttcagaaacaatgtgttcaggaacagtttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtaggttcaggaacaatttg 34061035  T
Q  233 ctcatggacggtttgagtttttggttgggggtctgttt 270  Q
     ||| ||||||||||||||| | |||||| || |||||    
T  34061034 ttcagggacggtttgagtttcttgttgggtgtttgttt 34060997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 23405017 - 23404900
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaa 194  Q
    ||||| ||||||||||| |||||| ||||||||||||||||| | ||||||| |||||||| |||||| |||||||| ||||| ||||||||||||||||    
T  23405017 ttctgtgttaggctgggattgttctgtggtagtttgttgttggttagaaacattgtgttcatgaacagattgttcagaaacacattgttcttggtcagaa 23404918  T
Q  195 gcaacttgttcaggaaca 212  Q
    ||||||||||||||||||    
T  23404917 gcaacttgttcaggaaca 23404900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 19476498 - 19476401
Alignment:
Q  112 gttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcagga 209  Q
    ||||||| ||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||    
T  19476498 gttgttctgtggtagcttgttgttggtcagaaacattgtgttcaggaacagattgttcaggaacaccgtgttcttggtcagaagcaacatgttcagga 19476401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 34061225 - 34061159
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  34061225 tgagatgtagaaggttggtcagaagctgtttgatgttcaggagaagttagattgatggttggtgatt 34061159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 1112988 - 1113073
Alignment:
Q  140 agaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaa 225  Q
    ||||||||  ||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||| | || |||||||    
T  1112988 agaaacaacctgttcaggaacagttggttcaggaacagtttgttcttggtcagaagcgacttgttcaggaacagtttgctcaggaa 1113073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 20789258 - 20789158
Alignment:
Q  112 gttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaac 211  Q
    ||||||| || || ||||||||||| ||||| |||  ||||||| |||||| |||||||| | ||| ||||||||||||||||||||| |||||||||||    
T  20789258 gttgttctgttgttgtttgttgttggtcagagacatggtgttcatgaacagattgttcagaagcaccttgttcttggtcagaagcaacctgttcaggaac 20789159  T
Q  212 a 212  Q
    |    
T  20789158 a 20789158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 17448329 - 17448383
Alignment:
Q  18 ggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  17448329 ggttggtcagaagctgtttgatgttcaggagaagttagattgatggttggtgatt 17448383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 31446962 - 31446896
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  31446962 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaggttgtgaag 31446896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 31842491 - 31842425
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||    
T  31842491 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttatgaag 31842425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 17448576 - 17448636
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggtt 325  Q
    |||||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||    
T  17448576 ctgttttagaggcctttgtgggggttggttgcatttctcctcctagatgtttttctaggtt 17448636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 34060966 - 34060898
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| | ||||||||| |||| ||||||| ||||||||||||||| |||||||    
T  34060966 ctgttttagaggcctttgtgggggttggttgcatttctcctcctaaatgtttttctaggttgtgaagtg 34060898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 15995064 - 15995130
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  15995064 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 15995130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 23480014 - 23480067
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  23480014 cttggtcagaagcaacttgttcaggaacaacaagttcaggaacagtttgctcat 23480067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 9345048 - 9344982
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  9345048 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 9344982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 14448792 - 14448858
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  14448792 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 14448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 14559824 - 14559890
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  14559824 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 14559890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 15767860 - 15767794
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  15767860 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 15767794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 17616157 - 17616091
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  17616157 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 17616091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 17728014 - 17727948
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  17728014 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 17727948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 23305372 - 23305306
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  23305372 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 23305306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 23371029 - 23370963
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  23371029 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 23370963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 23705870 - 23705804
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  23705870 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 23705804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 24589838 - 24589904
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  24589838 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 24589904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 24818643 - 24818709
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  24818643 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 24818709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27043993 - 27044059
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  27043993 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 27044059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 30229212 - 30229278
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  30229212 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 30229278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 31357631 - 31357565
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  31357631 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 31357565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 36584283 - 36584349
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  36584283 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 36584349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 37731730 - 37731796
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  37731730 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 37731796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 42051870 - 42051804
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  42051870 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 42051804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 21416141 - 21416206
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    |||||||||||||||||||  | ||||||||| | ||||||||||  |||||||||||||||||||    
T  21416141 ctgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaa 21416206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 21416238 - 21416303
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    |||||||||||||||||||  | ||||||||| | ||||||||||  |||||||||||||||||||    
T  21416238 ctgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaa 21416303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 39360846 - 39360794
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| |||||||||||||||||||||||| | |||||||||||| ||||||||    
T  39360846 cttgttcagaagcaacttgttcaggaacagtttgttcaggaacagtttgctca 39360794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 6984843 - 6984785
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  6984843 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 6984785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 19476363 - 19476298
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||||||| |||||    
T  19476363 ctgttttagaggcctttgtgggtgtaggttgcatttcaccacctaaatg-ttttctaggttgtgaag 19476298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 19476558 - 19476508
Alignment:
Q  22 ggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgatt 72  Q
    ||||||||||||||||| |||||||||||| || |||||| ||||||||||    
T  19476558 ggtcagaagctgtttgtggttcaggagaagctaaattgattgttggtgatt 19476508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 22684533 - 22684475
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  22684533 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 22684475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 23404826 - 23404760
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| |||||||  ||| |||| |||||||||| |||||    
T  23404826 ctgtcttagaggcctttgtgggtgttggttgcatttcaccatctaaatgtctttctaggttgtgaag 23404760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 27469091 - 27469033
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  27469091 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 27469033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 35224579 - 35224513
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  35224579 ctgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 35224513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 36696802 - 36696736
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| ||||||||||||| || ||| |||||    
T  36696802 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttttaagttgtgaag 36696736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 39492661 - 39492719
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  39492661 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 39492719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 14039127 - 14039070
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| ||||    
T  14039127 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaa 14039070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 15994967 - 15995027
Alignment:
Q  186 tggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    ||||||| |||||||||||||| | |||| |||||||||||| |||||||| ||| |||||    
T  15994967 tggtcaggagcaacttgttcagaagcaatttgttcaggaacagtttgctcagggatggttt 15995027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 22155677 - 22155625
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  22155677 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 22155625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 5292318 - 5292384
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  5292318 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 5292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 20560745 - 20560679
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  20560745 ctgtcttagaggcctttgttggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 20560679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 27605188 - 27605254
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  27605188 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 27605254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 31447101 - 31446999
Alignment:
Q  150 tgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgag 249  Q
    |||||| ||||||  ||||||| |||||   | ||||||||||||||||||||||||| |||| | ||||   ||||| |||||||| ||| |||||| |    
T  31447101 tgttcatgaacagactgttcagaaacaccaagctcttggtcagaagcaacttgttcagaaacagtttgtttctgaacagtttgctcagggatggtttggg 31447002  T
Q  250 ttt 252  Q
    |||    
T  31447001 ttt 31446999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 31842590 - 31842528
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||| ||| |||||    
T  31842590 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacagtttgctcagggatggttt 31842528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 39360867 - 39360813
Alignment:
Q  178 tttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||||| ||||||||||||||||||||||| | |||  |||||||||||| ||||    
T  39360867 tttgttgttggtcagaagcaacttgttcagaagcaacttgttcaggaacagtttg 39360813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 20560897 - 20560816
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaaca 176  Q
    ||||| ||||| ||||||||||||  |||||||||| | | | ||||||||||  |||||||||| || | |||||||||||    
T  20560897 ttctgtgttagtctggggttgttctatggtagtttgatctaggtcagaaacaacctgttcaggaatagttggttcaggaaca 20560816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 5292221 - 5292281
Alignment:
Q  186 tggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||||||||||||||||||||| | ||   |||||||||||| |||||||| ||| |||||    
T  5292221 tggtcagaagcaacttgttcagaagcagcttgttcaggaacagtttgctcagggatggttt 5292281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 40399571 - 40399519
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| ||||||||||||||   |||||||||||| ||||||||    
T  40399571 cttgttcagaagcagcttgttcaggaacagcttgttcaggaacagtttgctca 40399519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 252
Target Start/End: Original strand, 7680955 - 7681112
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaa 194  Q
    ||||| ||||||||||||||| || ||||||||||||||||| |||||||||  ||||||| |||||| |||||||| | ||| ||||||||||||||||    
T  7680955 ttctgtgttaggctggggttgatctgtggtagtttgttgttggtcagaaacatggtgttcatgaacagattgttcagaagcaccttgttcttggtcagaa 7681054  T
Q  195 gcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||| |||||||||||| | |||||||||||| |||||||| ||| |||||||||||    
T  7681055 gcaacctgttcaggaacagtttgttcaggaacagtttgctcagggatggtttgagttt 7681112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 95 - 270
Target Start/End: Original strand, 26562169 - 26562344
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaa 194  Q
    ||||| ||||| || |||||||||  |||||||||| | | | ||||||| | | ||||||||||||  |  |||||||||| |||||||| ||||||||    
T  26562169 ttctgtgttagtctagggttgttctatggtagtttgatctaggtcagaaatagtctgttcaggaacaattgattcaggaacagtttgttctaggtcagaa 26562268  T
Q  195 gcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagtttttggttgggggtctgttt 270  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||| || |||||  |||||||    
T  26562269 gcaacttgttcaggaacagtatgttcaggaacagtttgctcagggatggtttgagtttctgtttgggtttctgttt 26562344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 152768 - 152696
Alignment:
Q  140 agaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaaca 212  Q
    ||||||||  ||||||||||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  152768 agaaacaacctgttcaggaacagttggttcaggaacagtttgttcttggtcagaagcgacttgttcaggaaca 152696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 12732336 - 12732402
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  12732336 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 12732402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 12742929 - 12742995
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  12742929 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 12742995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 22644573 - 22644624
Alignment:
Q  186 tggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  22644573 tggtcaggagcaacttgttcaggaacaacatgttcaggaacagtttgctcat 22644624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 3173404 - 3173470
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  3173404 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 3173470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 13424974 - 13424908
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||||| |||| ||||||| |||||||||||||||| ||| |||||    
T  13424974 ctgtcttagaggcctttgtgggtgttgattgcatttcaccacctagatgtttttctaagttgtgaag 13424908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 35399538 - 35399472
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  35399538 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 35399472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 35647063 - 35646997
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  35647063 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 35646997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 38096885 - 38096951
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  38096885 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 38096951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 5835029 - 5835095
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  5835029 ctgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 5835095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 7509089 - 7509147
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  7509089 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 7509147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 23158228 - 23158162
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  23158228 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 23158162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 26562375 - 26562441
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  26562375 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 26562441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 36245439 - 36245381
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  36245439 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 36245381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 51654883 - 51654825
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  51654883 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 51654825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 47616927 - 47616866
Alignment:
Q  270 ttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  47616927 ttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 47616866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 13425088 - 13425036
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  13425088 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 13425036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 21206491 - 21206444
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgct 234  Q
    ||||| || ||||||||||||||||||| |||||||||||| ||||||    
T  21206491 ggtcataaacaacttgttcaggaacaatgtgttcaggaacagtttgct 21206444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 21214535 - 21214488
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgct 234  Q
    ||||| || ||||||||||||||||||| |||||||||||| ||||||    
T  21214535 ggtcataaacaacttgttcaggaacaatgtgttcaggaacagtttgct 21214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 12732237 - 12732299
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||| ||| |||||    
T  12732237 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacagtttgctcagggatggttt 12732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 12742830 - 12742892
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||| ||| |||||    
T  12742830 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacagtttgctcagggatggttt 12742892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 19180749 - 19180815
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  19180749 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 19180815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 12622383 - 12622334
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  12622383 tgagatgtggagggttggtcagaggctgtttgttggtcagaagaagttag 12622334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 21865290 - 21865339
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  21865290 tgagatgtggagggttggtcagaggctgtttgttggtcagaagaagttag 21865339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 21865415 - 21865464
Alignment:
Q  134 ttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgtt 183  Q
    |||||||| |||| | ||||||||||||| ||||||||||||| ||||||    
T  21865415 ttgttcaggaacagtttgttcaggaacagtttgttcaggaacagtttgtt 21865464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 4169110 - 4169166
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||    
T  4169110 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttcta 4169166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 12622259 - 12622207
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| ||||||||    
T  12622259 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacattttgctca 12622207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 19180644 - 19180696
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| |||||| || |||||||||||||| | |||||||||||| ||||||||    
T  19180644 cttgttcagaaacagcttgttcaggaacagtttgttcaggaacagtttgctca 19180696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 21865399 - 21865447
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||    
T  21865399 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttg 21865447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 67; Significance: 1e-29; HSPs: 4)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 2864 - 2714
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaa 194  Q
    ||||| |||||||||||||||||| || || ||||||||||| ||||| |||  |||||||  ||||| |||||||| | ||| ||| ||| ||||||||    
T  2864 ttctgtgttaggctggggttgttctgttgttgtttgttgttggtcagagacatggtgttcataaacagattgttcagaagcaccttggtctaggtcagaa 2765  T
Q  195 gcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    ||||| |||||||||||||| |||||||||||| |||||||| ||| ||||    
T  2764 gcaacctgttcaggaacaatttgttcaggaacagtttgctcagggatggtt 2714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 11119 - 10969
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaa 194  Q
    ||||| |||||||||||||||||| || || ||||||||||| ||||| |||  |||||||  ||||| |||||||| | ||| ||| ||| ||||||||    
T  11119 ttctgtgttaggctggggttgttctgttgttgtttgttgttggtcagagacatggtgttcataaacagattgttcagaagcaccttggtctaggtcagaa 11020  T
Q  195 gcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    ||||| |||||||||||||| |||||||||||| |||||||| ||| ||||    
T  11019 gcaacctgttcaggaacaatttgttcaggaacagtttgctcagggatggtt 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 2664 - 2598
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||||||| || ||||||||||| ||||||| ||||||||| |||||||||| |||||    
T  2664 ctgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtctttctaggttgtgaag 2598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 10919 - 10853
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||||||| || ||||||||||| ||||||| ||||||||| |||||||||| |||||    
T  10919 ctgtcttagaggcctttttgggtgttggttgcatttcaccacctagatgtctttctaggttgtgaag 10853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 261
Target Start/End: Original strand, 24304 - 24454
Alignment:
Q  111 ggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaa 210  Q
    |||||||| ||| ||||||| | | | | ||||||||  ||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||| |||    
T  24304 ggttgttctgtgttagtttggtctaggttagaaacaacctgttcaggaacagttggttcaggaacagtttgttcttggtcagaagaaacttgttcaagaa 24403  T
Q  211 caatatgttcaggaacaatttgctcatggacggtttgagtttttggttggg 261  Q
    || | |||| ||||||| |||||||| | | ||||||||||| ||||||||    
T  24404 cagtttgtttaggaacagtttgctcaggaatggtttgagtttctggttggg 24454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 198 - 93
Alignment:
Q  107 ctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttca 206  Q
    |||||||||||| ||||||||||| | | | |||||||||   ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  198 ctggggttgttctgtggtagtttgatctaggtcagaaacatcctgttcaggaacagttggttcaggaacagtttgttcttggtcagaagcaacttgttca 99  T
Q  207 ggaaca 212  Q
    ||||||    
T  98 ggaaca 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 21188 - 21256
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  21188 ctgttttagaggcctttgtgggtgttggttgcatttcacctcctagatgtttttctaggttgtgaagtg 21256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 11836 - 11764
Alignment:
Q  8 agatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagg 80  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||| |||||  | ||||||||| |||||||    
T  11836 agatgtagaaggttggtcagaagctgtgtgttgttcaggagaagtttgattgtgaattggtgattggttaagg 11764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 11718 - 11651
Alignment:
Q  165 tgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||||||| || ||||| ||| ||||    
T  11718 tgttcatgaacactttgctctaggtcagaagcaacttgttcaggaacaatttgctcagggacagtttg 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 11682 - 11634
Alignment:
Q  216 tgttcaggaacaatttgctcatggacggtttgagtttttggttgggggt 264  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  11682 tgttcaggaacaatttgctcagggacagtttgagtttctggttgggggt 11634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2119 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold2119
Description:

Target: scaffold2119; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 830 - 706
Alignment:
Q  128 ttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaaca 227  Q
    ||||||||| ||||| |||  ||||||| |||||  |||||||| | ||| ||||||| ||||||||||||| |||||||||||| | ||||||||||||    
T  830 ttgttgttggtcagagacatggtgttcatgaacaaattgttcagaagcaccttgttctaggtcagaagcaacctgttcaggaacagtttgttcaggaaca 731  T
Q  228 atttgctcatggacggtttgagttt 252  Q
     |||||||| ||| ||||| |||||    
T  730 gtttgctcagggatggtttcagttt 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2119; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 678 - 612
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||||||||||||||| || |||| |||| | ||||||| ||||||||| |||||||||| |||||    
T  678 ctgttttagaggcctttttgggtgtaggttacatttcaccacctagatgtctttctaggttgtgaag 612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 31658 - 31738
Alignment:
Q  165 tgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| |  ||||||||||| |||||||| ||||||||    
T  31658 tgttcaggaacattttgctcttggtcagaagcaacttgttcaggaacagttggttcaggaacactttgctcagggacggtt 31738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 31779 - 31845
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||| | ||||||||| | |||||||||| |||||||||||| ||||||||    
T  31779 ctgttttagaggcctttgtgggggttggttgcatctcacctcctaaatgtttttctagattatgaag 31845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 31535 - 31634
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    ||||||||||| |||||||||||||  || ||||| ||| ||   ||| || || || ||||||||| ||||||| |||||||||| | |||||||||||    
T  31535 tgagatgaagatggttggtcagaagaagtgtgttgctcaagaattgtttgagtgttatttggtgattggttaaggttttctgtttgttgttctgggttag 31634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 9e-21; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 25213861 - 25213790
Alignment:
Q  181 gttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    ||||| ||||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  25213861 gttctaggtcagaagcaccttgttcaggaacactaagttcaggaacaatttgctcagggacggtttgagttt 25213790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 2714674 - 2714608
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||    
T  2714674 ctgtcttagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttatgaag 2714608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 9161482 - 9161568
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttg 181  Q
    ||||| |||||||||||||||||| || |||||||||| | | ||||||||||  ||||||||||||| | ||||||||||| ||||    
T  9161482 ttctgagttaggctggggttgttctgtagtagtttgttctaggtcagaaacaacctgttcaggaacagttggttcaggaacagtttg 9161568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 466045 - 465979
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| ||||||||||| ||||||  |||||||||||||||| ||| |||||    
T  466045 ctgtcttagaggcctttgtgggtgttggttgcatttcacaacctagatgtttttctaagttgtgaag 465979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 1989405 - 1989471
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  1989405 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 1989471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 8011133 - 8011067
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  8011133 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 8011067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 9087076 - 9087142
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  9087076 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 9087142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 11007024 - 11007090
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  11007024 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 11007090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 25213985 - 25213871
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttagattgatagttggtgattagttaagggtttctgtttgattttctgggttag 105  Q
    |||||||| || ||||||| ||| | ||| |||||||||||| ||||| ||||| |||||||||||| ||||||  |||||||||| | ||||  |||||    
T  25213985 tgagatgaggaaggttggttagaggttgtatgttgttcaggaaaagtttgattgttagttggtgattggttaagattttctgtttgttgttctaagttag 25213886  T
Q  106 gctggggttgttcag 120  Q
    | || ||||| ||||    
T  25213885 gttgtggttgatcag 25213871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 26399148 - 26399082
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  26399148 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 26399082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 40051156 - 40051090
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  40051156 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 40051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 15886666 - 15886605
Alignment:
Q  270 ttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||||||||||||| |||| |||||| ||||||| ||||||||| |||||||||| |||||    
T  15886666 ttagaggcctttgtgggtgtaggttgcatttcaccacctagatgtctttctaggttgtgaag 15886605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 15218150 - 15218202
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||| |||||||||||||||| | |||||||||||| |||||||||    
T  15218150 ttggtcagaagtaacttgttcaggaacagtttgttcaggaacactttgctcat 15218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 21001535 - 21001467
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| |||||||| ||| |||||| ||||    
T  21001535 cttgttcagaagcagcttgttcaggaacagtttgttcaggaacagtttgctcagggatggtttgcgttt 21001467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 9434986 - 9435049
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtttg 247  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| |||||||| | ||||||||    
T  9434986 cttgttcagaagcagcttgttcaggaacagtttgttcaggaacagtttgctcaggaacggtttg 9435049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 6876385 - 6876323
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| |||||||| ||| |||||    
T  6876385 cttgttcagaagcagcttgttcaggaacagtttgttcaggaacagtttgctcagggatggttt 6876323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 11097861 - 11097927
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| |||| |||||| ||||||| |||||||||||||||| ||| |||||    
T  11097861 ctgtcttagaggccttagtgggtgtgggttgcatttcaccacctagatgtttttctaagttgtgaag 11097927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 18421113 - 18421179
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  | ||||||||| | ||||||||||  | ||||||||||||||||||    
T  18421113 ctgttttagaggcctttgtaggggttggttgcatctcacctcctaagtatttttctaggttatgaag 18421179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 24736580 - 24736638
Alignment:
Q  273 gaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  24736580 gaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 24736638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 42867698 - 42867764
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  42867698 ctgtcttagaggctttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 42867764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 168657 - 168709
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  168657 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 168709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 2714788 - 2714736
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  2714788 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctca 2714736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 5687282 - 5687334
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  5687282 cttgttcagaagcagcttgttcaggaacagtttgttcaggaacagtttgctca 5687334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 9435106 - 9435174
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||||    
T  9435106 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaagtg 9435174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 15886789 - 15886745
Alignment:
Q  168 tcaggaacactttgttcttggtcagaagcaacttgttcaggaaca 212  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||    
T  15886789 tcagaaacagtttgttctaggtcagaagcaacttgttcaggaaca 15886745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 18420990 - 18421062
Alignment:
Q  112 gttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttc 184  Q
    ||||||||| | |||||||  || | ||||||||||  |||||| |||||| |||||||||||||||||||||    
T  18420990 gttgttcagggttagtttggggtaggtcagaaacaacttgttcatgaacagtttgttcaggaacactttgttc 18421062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 21001430 - 21001362
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||||    
T  21001430 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaagtg 21001362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 14125095 - 14125138
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  14125095 tcagaagcaaattgttcaggaacaatttgttcaggaacagtttg 14125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 14428491 - 14428534
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  14428491 tcagaagcaaattgttcaggaacaatttgttcaggaacagtttg 14428534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 466144 - 466082
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | || ||||||||| |||||||| ||| |||||    
T  466144 cttgttcagaagcatcttgttcaggaacagtttgctcaggaacagtttgctcagggatggttt 466082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 5687387 - 5687453
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| |||||||||||| || |||||    
T  5687387 ctgtcttagaggcctttgtaggtgtaggttgcatttcaccacctaaatgtttttctagattgtgaag 5687453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 9161514 - 9161572
Alignment:
Q  178 tttgttcttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||||||| |||||||| |||| |||||||||||| |  ||||||||||| ||||||||    
T  9161514 tttgttctaggtcagaaacaacctgttcaggaacagttggttcaggaacagtttgctca 9161572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 10560080 - 10560146
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||| | ||||||| |||| ||| ||||||| |||||||||    
T  10560080 ctgtcttagaggcctttgtgggtgtaggtttcatttcaccacctaaatgcttttctaagttatgaag 10560146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 18421014 - 18421072
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    |||||||| ||||||||||| ||||| | |||||||||||| |||| ||| ||||||||    
T  18421014 ggtcagaaacaacttgttcatgaacagtttgttcaggaacactttgttcagggacggtt 18421072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 25210051 - 25209997
Alignment:
Q  279 tttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtg 333  Q
    |||||| | ||||||||| |||||||||||| |||||||||||| || |||||||    
T  25210051 tttgtgggggttggttgcatttcacctcctaaatgtttttctagattgtgaagtg 25209997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 6876497 - 6876448
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||  |||||||||||||||||||||||||| |||| ||| |||||    
T  6876497 tgagatgtggagggttggtcagaagctgtttgttggtcagaagaggttag 6876448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 17959329 - 17959280
Alignment:
Q  6 tgagatgaagagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  17959329 tgagatgtggagggttggtcagaggctgtttgttggtcagaagaagttag 17959280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 4213786 - 4213838
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||| ||||    
T  4213786 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagttttctca 4213838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 8619058 - 8619098
Alignment:
Q  15 gagggttggtcagaagctgtttgttgttcaggagaagttag 55  Q
    |||||||||||||| ||||||||||| |||| |||||||||    
T  8619058 gagggttggtcagaggctgtttgttggtcagaagaagttag 8619098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 9161634 - 9161690
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttcta 321  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| |||||||    
T  9161634 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttcta 9161690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 22090947 - 22090995
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttg 232  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||    
T  22090947 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttg 22090995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 252
Target Start/End: Original strand, 811 - 951
Alignment:
Q  112 gttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaac 211  Q
    |||| |||| ||| ||||||||||| ||||| |||   |||||| |||||| |||||||| | ||| | | ||||||||||||||||||||||||| |||    
T  811 gttggtcagaggttgtttgttgttggtcagagacatgatgttcatgaacagtttgttcagaagcacctagctcttggtcagaagcaacttgttcagaaac 910  T
Q  212 aatatgttcaggaacaatttgctcatggacggtttgagttt 252  Q
    | | |||||  ||||| |||||||| ||| ||||| |||||    
T  911 agtttgttcctgaacagtttgctcagggatggtttcagttt 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 991 - 1057
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||||||| || |||| |||||| ||||||| ||||||||| |||||||||| |||||    
T  991 ctgtcttagaggcctttttgggtgtaggttgcatttcaccacctagatgtctttctaggttgtgaag 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 177293 - 177341
Alignment:
Q  164 ttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaaca 212  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  177293 ttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 177341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 177403 - 177466
Alignment:
Q  268 ttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||| |||||    
T  177403 ttttagaggcctttgtgggggttggttgcatttcacctcctaaatgcttttctaggttgtgaag 177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 4208 - 4274
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| |||||||| |||||| ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  4208 ctgtcttagaggcttttgtgggtgttggttgcatttcaccacctagatgtttttctaggttgtgaag 4274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 4082 - 4134
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||||||    
T  4082 cttgttcagaagcagcttgttcaggaacagtttgttcaggaacagtttgctca 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 2925 - 2860
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaa 330  Q
    ||||| |||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| ||||    
T  2925 ctgttctagaggcctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaa 2860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 3899 - 3951
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    |||||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  3899 ttggtcagaagcaacttgttcaggaacagtttgttcaggaacactttgctcat 3951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 106907 - 106955
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  106907 tcagaagcaacttgttcaggaacaacatgttcaggaacagtttgctcat 106955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 62988 - 63040
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  62988 ttggtcagaagcaacttgttcaggaacaacaagttcaggaacagtttgctcat 63040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 3144 - 3210
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  3144 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 3210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 32985 - 33051
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  32985 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 33051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 41397 - 41311
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaacactttg 181  Q
    ||||| |||||||||||||||||| ||||||||||||| | | ||||||| |   |||||||||||||   ||||||||||| ||||    
T  41397 ttctgtgttaggctggggttgttctgtggtagtttgttctaggtcagaaatagcctgttcaggaacagtaggttcaggaacagtttg 41311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 45977 - 45911
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  45977 ctgtcttagaggccttagtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 45911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 45769 - 45703
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||| ||||||| ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  45769 ctgtcttagaggtctttgtgggtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 45703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 45868 - 45806
Alignment:
Q  184 cttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggttt 246  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| |||||||| ||| |||||    
T  45868 cttgttcagaagcatcttgttcaggaacagtttgttcaggaacagtttgctcagggatggttt 45806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 212536 - 212602
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  | ||||||||| | ||||||||||  ||||||||||||||||||||    
T  212536 ctgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaag 212602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 218405 - 218471
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  | ||||||||| | ||||||||||  ||||||||||||||||||||    
T  218405 ctgttttagaggcctttgtaggggttggttgcatctcacctcctaagtgtttttctaggttatgaag 218471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 212414 - 212462
Alignment:
Q  164 ttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaaca 212  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  212414 ttgttcaggaacattttgctcttggtcagaaacaacttgttcaggaaca 212462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 218283 - 218331
Alignment:
Q  164 ttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaaca 212  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  218283 ttgttcaggaacattttgctcttggtcagaaacaacttgttcaggaaca 218331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 9407 - 9355
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| |||||||||    
T  9407 ttggttagaaacaacttgttcaggaacaatgtgttcaggaacagtttgctcat 9355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 16714 - 16766
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||| |||||||||||||||| | |||||||||||| |||||||||    
T  16714 ttggtcagaagtaacttgttcaggaacagtttgttcaggaacactttgctcat 16766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 21853 - 21905
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  21853 ttggtcagaggcaacttgttcaggaacagtttgttcaggaacactttgctcat 21905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 129615 - 129690
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaagtgatgatgt 340  Q
    |||||||||||||||||||  | ||||||||| | || || |||| ||||||||||||||||||||| | ||||||    
T  129615 ctgttttagaggcctttgtaggggttggttgcatctcgccgcctaaatgtttttctaggttatgaagggttgatgt 129690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 10961 - 11008
Alignment:
Q  189 tcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  10961 tcagaagcaacttgttcaggaacaacaagttcaggaacagtttgctca 11008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 2229 - 2163
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  | ||||||||| | |||||||| |  ||||||||||||||||||||    
T  2229 ctgttttagaggcctttgtaggggttggttgcatctcacctccaaagtgtttttctaggttatgaag 2163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 2341 - 2291
Alignment:
Q  138 tcagaaacaatgtgttcaggaacaggttgttcaggaacactttgttcttgg 188  Q
    |||||| |||| ||||||||||||| |||||||||||||||||| ||||||    
T  2341 tcagaagcaatttgttcaggaacagtttgttcaggaacactttgctcttgg 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 8533 - 8467
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||||||||||||||||||  | ||||||||| | ||| ||||||  ||||||||||||||||||||    
T  8533 ctgttttagaggcctttgtaggggttggttgcatctcatctcctaagtgtttttctaggttatgaag 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 8647 - 8589
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcatggacggtt 245  Q
    ||||||| |||||||||||||||||| | |||||||||||| ||||||| |||| ||||    
T  8647 ggtcagaggcaacttgttcaggaacagtttgttcaggaacattttgctcttggatggtt 8589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 2343 - 2295
Alignment:
Q  187 ggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctc 235  Q
    |||||||||||| ||||||||||||| | |||||||||||| |||||||    
T  2343 ggtcagaagcaatttgttcaggaacagtttgttcaggaacactttgctc 2295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 2560 - 2494
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  2560 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 2494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 55780 - 55846
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  55780 ctgtcttagaggcctttgtgggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 55846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 164416 - 164375
Alignment:
Q  196 caacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  164416 caacttgttcaggaacaatgtgttcaggaacagtttgctcat 164375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 8372 - 8424
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||| |||||||||||||||| | |||||| ||||| |||||||||    
T  8372 ttggtcagaagtaacttgttcaggaacagtttgttcaagaacagtttgctcat 8424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 5178 - 5142
Alignment:
Q  200 ttgttcaggaacaatatgttcaggaacaatttgctca 236  Q
    |||||||||||||||||||||||||||| ||||||||    
T  5178 ttgttcaggaacaatatgttcaggaacactttgctca 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 22314 - 22354
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaa 225  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  22314 ttggtcaggagcaacttgttcaggaacaacatgttcaggaa 22354  T

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Target: scaffold0485 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 432 - 366
Alignment:
Q  265 ctgttttagaggcctttgtgagtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    |||| ||||||||||||||  |||| |||||| ||||||| |||| ||| ||||||| |||||||||    
T  432 ctgtcttagaggcctttgttggtgtaggttgcatttcaccacctaaatgcttttctaagttatgaag 366  T

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Target: scaffold0485; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 584 - 503
Alignment:
Q  95 ttctgggttaggctggggttgttcagtggtagtttgttgttgttcagaaacaatgtgttcaggaacaggttgttcaggaaca 176  Q
    ||||| ||||| ||||||||||||  |||||||||| | | | ||||||||||  |||||||||| || | |||||||||||    
T  584 ttctgtgttagtctggggttgttctatggtagtttgatctaggtcagaaacaacctgttcaggaatagttggttcaggaaca 503  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 20254 - 20299
Alignment:
Q  286 gtgttggttgcgtttcacctcctagatgtttttctaggttatgaag 331  Q
    ||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  20254 gtgttggttgcatttcaccacctagatgtttttctaagttgtgaag 20299  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 52063 - 51990
Alignment:
Q  150 tgttcaggaacaggttgttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaatatgttcagg 223  Q
    |||||| |||||| |||||||| | ||| | | ||||||||||||||||| |||||||||| | | ||||||||    
T  52063 tgttcatgaacagattgttcagaagcacctagatcttggtcagaagcaacctgttcaggaatagtttgttcagg 51990  T

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Target: scaffold0670 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 2610 - 2558
Alignment:
Q  185 ttggtcagaagcaacttgttcaggaacaatatgttcaggaacaatttgctcat 237  Q
    ||||||||||  ||||| |||||||||| | |||||||||||| |||||||||    
T  2610 ttggtcagaaataacttattcaggaacagtttgttcaggaacactttgctcat 2558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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