View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0449_low_8 (Length: 328)

Name: NF0449_low_8
Description: NF0449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0449_low_8
NF0449_low_8
[»] chr6 (55 HSPs)
chr6 (11-308)||(23839146-23839444)
chr6 (11-145)||(23058054-23058189)
chr6 (11-137)||(2286577-2286703)
chr6 (11-143)||(933471-933603)
chr6 (195-308)||(23057887-23058000)
chr6 (11-229)||(12943152-12943370)
chr6 (11-256)||(25397174-25397418)
chr6 (202-309)||(930096-930203)
chr6 (199-308)||(4477805-4477915)
chr6 (206-308)||(18800385-18800488)
chr6 (202-308)||(29614147-29614254)
chr6 (11-144)||(9187606-9187740)
chr6 (202-308)||(10986181-10986288)
chr6 (11-143)||(24512662-24512795)
chr6 (202-308)||(12168312-12168417)
chr6 (202-308)||(19287221-19287326)
chr6 (202-308)||(19785870-19785975)
chr6 (202-308)||(19878405-19878510)
chr6 (35-137)||(29483266-29483367)
chr6 (202-308)||(19884181-19884286)
chr6 (202-284)||(34639987-34640069)
chr6 (202-284)||(34646661-34646743)
chr6 (202-307)||(25469705-25469808)
chr6 (11-88)||(21565010-21565086)
chr6 (11-87)||(5288908-5288983)
chr6 (11-69)||(18800634-18800690)
chr6 (199-254)||(9187498-9187553)
chr6 (41-145)||(18787158-18787262)
chr6 (190-236)||(24441673-24441719)
chr6 (202-256)||(24512844-24512898)
chr6 (199-256)||(25348488-25348545)
chr6 (11-52)||(29613952-29613993)
chr6 (11-51)||(4478086-4478126)
chr6 (101-145)||(8767115-8767159)
chr6 (101-145)||(14615340-14615384)
chr6 (11-70)||(19287462-19287519)
chr6 (11-51)||(25598842-25598882)
chr6 (11-90)||(28288316-28288394)
chr6 (202-273)||(31252406-31252477)
chr6 (199-308)||(21565209-21565319)
chr6 (11-56)||(2709521-2709566)
chr6 (202-290)||(11288669-11288758)
chr6 (199-256)||(25598645-25598702)
chr6 (11-70)||(12168553-12168610)
chr6 (19-70)||(19785685-19785734)
chr6 (199-236)||(18659450-18659487)
chr6 (199-256)||(19471332-19471389)
chr6 (202-275)||(15458469-15458544)
chr6 (202-275)||(15465064-15465139)
chr6 (11-70)||(19884422-19884478)
chr6 (186-229)||(9184983-9185025)
chr6 (199-256)||(2286764-2286821)
chr6 (187-236)||(29415542-29415591)
chr6 (11-70)||(19878646-19878702)
chr6 (188-228)||(21477299-21477339)
[»] chr7 (57 HSPs)
chr7 (11-308)||(14422932-14423231)
chr7 (11-308)||(18873309-18873604)
chr7 (11-184)||(14113406-14113580)
chr7 (195-308)||(15168124-15168237)
chr7 (11-145)||(19617473-19617606)
chr7 (199-308)||(16009525-16009634)
chr7 (202-308)||(12709844-12709949)
chr7 (202-308)||(13122915-13123020)
chr7 (202-308)||(13743658-13743763)
chr7 (199-308)||(10895788-10895898)
chr7 (11-143)||(21230778-21230911)
chr7 (11-229)||(11304210-11304428)
chr7 (11-256)||(11382680-11382925)
chr7 (199-308)||(16677242-16677353)
chr7 (199-308)||(17651478-17651589)
chr7 (202-308)||(12590644-12590749)
chr7 (202-308)||(13007381-13007486)
chr7 (11-137)||(23663936-23664061)
chr7 (11-137)||(29797665-29797790)
chr7 (11-137)||(29801484-29801609)
chr7 (11-256)||(11389157-11389402)
chr7 (11-145)||(4281228-4281359)
chr7 (11-88)||(16677476-16677552)
chr7 (11-88)||(17651712-17651788)
chr7 (11-68)||(20310868-20310926)
chr7 (202-256)||(20311052-20311106)
chr7 (202-256)||(21230960-21231014)
chr7 (102-159)||(36305145-36305202)
chr7 (11-51)||(148830-148870)
chr7 (11-70)||(12590451-12590508)
chr7 (11-70)||(13007622-13007679)
chr7 (102-265)||(13679485-13679646)
chr7 (11-51)||(14567430-14567470)
chr7 (199-258)||(11311057-11311116)
chr7 (34-143)||(19152934-19153039)
chr7 (34-143)||(20752333-20752438)
chr7 (43-127)||(10520878-10520961)
chr7 (202-258)||(2971252-2971308)
chr7 (202-258)||(20906462-20906518)
chr7 (35-132)||(13664975-13665073)
chr7 (43-127)||(15103338-15103422)
chr7 (187-237)||(831619-831669)
chr7 (187-237)||(1196799-1196849)
chr7 (187-237)||(34958578-34958628)
chr7 (91-145)||(41780943-41780996)
chr7 (187-232)||(39431171-39431216)
chr7 (175-216)||(45186461-45186502)
chr7 (199-256)||(46625963-46626020)
chr7 (202-258)||(29181110-29181166)
chr7 (190-233)||(23461621-23461664)
chr7 (34-143)||(19146613-19146718)
chr7 (34-143)||(20746012-20746117)
chr7 (202-275)||(31155374-31155448)
chr7 (202-263)||(14319630-14319691)
chr7 (199-236)||(40554515-40554552)
chr7 (199-235)||(13664874-13664910)
chr7 (202-258)||(16091073-16091129)
[»] chr5 (32 HSPs)
chr5 (11-285)||(23111009-23111283)
chr5 (11-308)||(28369864-28370161)
chr5 (11-308)||(22751090-22751385)
chr5 (11-308)||(19512334-19512631)
chr5 (11-132)||(38144345-38144466)
chr5 (202-308)||(38144537-38144643)
chr5 (11-145)||(22006699-22006833)
chr5 (11-137)||(22337647-22337771)
chr5 (11-137)||(22341185-22341309)
chr5 (11-229)||(37803885-37804102)
chr5 (11-145)||(23528755-23528887)
chr5 (11-227)||(41875404-41875620)
chr5 (11-137)||(9777219-9777344)
chr5 (202-308)||(23528580-23528685)
chr5 (199-285)||(18407941-18408027)
chr5 (34-145)||(21900843-21900952)
chr5 (11-70)||(22438567-22438626)
chr5 (202-256)||(22438748-22438802)
chr5 (11-51)||(42961778-42961818)
chr5 (190-236)||(8952029-8952075)
chr5 (202-258)||(19236898-19236954)
chr5 (190-236)||(22777058-22777104)
chr5 (202-258)||(20781742-20781798)
chr5 (202-254)||(22461158-22461210)
chr5 (202-254)||(22467782-22467834)
chr5 (190-252)||(10817814-10817876)
chr5 (187-229)||(26707397-26707439)
chr5 (187-229)||(26977131-26977173)
chr5 (195-256)||(22337524-22337585)
chr5 (202-230)||(17021914-17021942)
chr5 (202-258)||(20772967-20773023)
chr5 (202-305)||(34830035-34830138)
[»] chr1 (35 HSPs)
chr1 (11-308)||(20436836-20437131)
chr1 (35-266)||(32651563-32651793)
chr1 (11-256)||(19663326-19663571)
chr1 (11-145)||(21543234-21543367)
chr1 (11-120)||(16373102-16373209)
chr1 (11-143)||(42094774-42094903)
chr1 (202-308)||(41111984-41112089)
chr1 (35-256)||(11158094-11158310)
chr1 (43-145)||(20850112-20850212)
chr1 (199-266)||(18712790-18712857)
chr1 (11-145)||(29553415-29553548)
chr1 (11-159)||(21736198-21736345)
chr1 (11-145)||(11140074-11140208)
chr1 (199-256)||(20805322-20805379)
chr1 (11-70)||(41112225-41112282)
chr1 (186-232)||(24476350-24476395)
chr1 (199-256)||(10811780-10811837)
chr1 (11-56)||(20837181-20837226)
chr1 (187-236)||(52984240-52984289)
chr1 (35-145)||(18712909-18713019)
chr1 (202-258)||(20851133-20851189)
chr1 (202-258)||(20857760-20857816)
chr1 (202-258)||(21706274-21706330)
chr1 (202-258)||(21710816-21710872)
chr1 (188-232)||(25091404-25091448)
chr1 (102-145)||(19777713-19777756)
chr1 (43-145)||(21409666-21409766)
chr1 (175-216)||(23634535-23634576)
chr1 (35-113)||(31926296-31926373)
chr1 (91-145)||(5381712-5381765)
chr1 (203-236)||(18271338-18271371)
chr1 (203-236)||(18275992-18276025)
chr1 (199-236)||(18824633-18824670)
chr1 (187-216)||(20058522-20058551)
chr1 (187-216)||(35064575-35064604)
[»] chr4 (40 HSPs)
chr4 (11-256)||(18213769-18214014)
chr4 (11-137)||(2757449-2757575)
chr4 (11-111)||(56582283-56582383)
chr4 (11-159)||(16157884-16158033)
chr4 (202-303)||(8045833-8045933)
chr4 (35-137)||(15535235-15535336)
chr4 (11-137)||(49546758-49546883)
chr4 (33-145)||(43283885-43283998)
chr4 (202-306)||(11848058-11848168)
chr4 (202-281)||(53483681-53483759)
chr4 (191-256)||(13888643-13888708)
chr4 (202-256)||(15408140-15408194)
chr4 (175-256)||(8834897-8834978)
chr4 (191-256)||(15245217-15245282)
chr4 (191-256)||(15308122-15308187)
chr4 (11-55)||(13511328-13511372)
chr4 (102-145)||(14063793-14063836)
chr4 (199-258)||(14486659-14486718)
chr4 (186-232)||(15069781-15069826)
chr4 (186-232)||(15076381-15076426)
chr4 (11-69)||(15857654-15857712)
chr4 (11-52)||(11848323-11848364)
chr4 (187-237)||(15747542-15747592)
chr4 (166-216)||(16228231-16228281)
chr4 (188-237)||(17143255-17143304)
chr4 (207-256)||(22724691-22724740)
chr4 (202-258)||(16146831-16146887)
chr4 (202-258)||(27906264-27906320)
chr4 (34-109)||(14822471-14822544)
chr4 (186-229)||(15318943-15318985)
chr4 (35-113)||(30240140-30240217)
chr4 (169-215)||(16485671-16485717)
chr4 (11-97)||(53904310-53904394)
chr4 (199-236)||(3338381-3338418)
chr4 (199-236)||(10705747-10705784)
chr4 (199-236)||(10919517-10919554)
chr4 (199-236)||(14931124-14931161)
chr4 (43-145)||(15359822-15359924)
chr4 (180-216)||(10783409-10783445)
chr4 (180-216)||(10972060-10972096)
[»] scaffold0337 (1 HSPs)
scaffold0337 (11-256)||(8579-8824)
[»] chr2 (34 HSPs)
chr2 (11-308)||(6483666-6483964)
chr2 (11-308)||(6487133-6487431)
chr2 (11-256)||(9242962-9243209)
chr2 (195-308)||(19661447-19661560)
chr2 (11-145)||(6743112-6743245)
chr2 (202-308)||(26583776-26583881)
chr2 (11-145)||(43694578-43694710)
chr2 (11-137)||(20262273-20262398)
chr2 (35-137)||(10683770-10683871)
chr2 (11-145)||(201799-201936)
chr2 (29-285)||(23265114-23265368)
chr2 (29-285)||(23280182-23280436)
chr2 (11-88)||(23101260-23101337)
chr2 (102-256)||(21908360-21908512)
chr2 (202-308)||(5706024-5706130)
chr2 (11-52)||(26584036-26584077)
chr2 (11-51)||(6259976-6260016)
chr2 (34-145)||(17634971-17635081)
chr2 (101-145)||(24944416-24944460)
chr2 (43-145)||(20649163-20649262)
chr2 (11-69)||(17965390-17965448)
chr2 (199-308)||(23089052-23089162)
chr2 (199-308)||(23101460-23101570)
chr2 (202-299)||(26885139-26885236)
chr2 (199-256)||(24661578-24661635)
chr2 (202-258)||(10575-10631)
chr2 (204-300)||(23878964-23879060)
chr2 (202-258)||(25180930-25180986)
chr2 (35-97)||(2945242-2945303)
chr2 (11-52)||(19664877-19664919)
chr2 (11-62)||(20317023-20317074)
chr2 (202-276)||(23168299-23168374)
chr2 (202-276)||(23579556-23579631)
chr2 (202-263)||(27207720-27207781)
[»] scaffold0019 (3 HSPs)
scaffold0019 (11-216)||(34481-34687)
scaffold0019 (34-145)||(13694-13801)
scaffold0019 (202-256)||(135474-135528)
[»] chr8 (42 HSPs)
chr8 (29-256)||(18614273-18614498)
chr8 (81-285)||(23481932-23482136)
chr8 (202-308)||(44477571-44477677)
chr8 (202-308)||(44492729-44492835)
chr8 (11-132)||(8727546-8727665)
chr8 (11-145)||(23826318-23826451)
chr8 (202-308)||(23866564-23866669)
chr8 (199-308)||(8727730-8727840)
chr8 (203-308)||(17054540-17054644)
chr8 (11-76)||(14056383-14056447)
chr8 (11-113)||(44477773-44477873)
chr8 (11-113)||(44492931-44493031)
chr8 (11-63)||(25112144-25112196)
chr8 (195-258)||(29643379-29643442)
chr8 (34-256)||(21931698-21931907)
chr8 (102-159)||(21283096-21283153)
chr8 (199-256)||(39364921-39364978)
chr8 (34-145)||(23654436-23654546)
chr8 (34-145)||(33089962-33090072)
chr8 (11-145)||(21320988-21321121)
chr8 (11-70)||(17054781-17054838)
chr8 (202-258)||(24320671-24320727)
chr8 (34-145)||(25623642-25623752)
chr8 (11-51)||(27940656-27940696)
chr8 (202-256)||(14056564-14056618)
chr8 (11-141)||(20773042-20773172)
chr8 (11-141)||(20782836-20782966)
chr8 (202-256)||(25111977-25112031)
chr8 (27-119)||(29643208-29643298)
chr8 (191-237)||(38184685-38184731)
chr8 (15-56)||(20972991-20973032)
chr8 (11-142)||(21325585-21325716)
chr8 (169-216)||(21682805-21682852)
chr8 (169-215)||(14593855-14593901)
chr8 (190-236)||(17272625-17272671)
chr8 (188-258)||(19750549-19750619)
chr8 (190-220)||(20458026-20458056)
chr8 (186-236)||(22919955-22920005)
chr8 (175-216)||(21685193-21685234)
chr8 (175-216)||(21689542-21689583)
chr8 (199-236)||(32950917-32950954)
chr8 (192-220)||(20463229-20463257)
[»] chr3 (51 HSPs)
chr3 (11-308)||(9534276-9534573)
chr3 (11-137)||(16801147-16801273)
chr3 (11-137)||(38310609-38310736)
chr3 (195-308)||(14762751-14762864)
chr3 (11-285)||(17240324-17240596)
chr3 (199-308)||(20247786-20247895)
chr3 (11-137)||(20247601-20247725)
chr3 (11-145)||(14085709-14085842)
chr3 (11-132)||(24193082-24193201)
chr3 (11-145)||(49400709-49400842)
chr3 (11-145)||(14091110-14091243)
chr3 (204-308)||(24192904-24193009)
chr3 (199-308)||(38310797-38310906)
chr3 (11-123)||(11849415-11849527)
chr3 (11-123)||(13666905-13667017)
chr3 (11-142)||(8579056-8579186)
chr3 (202-308)||(23370506-23370613)
chr3 (11-137)||(54521876-54522001)
chr3 (202-308)||(24933829-24933934)
chr3 (202-283)||(41455098-41455178)
chr3 (11-88)||(55498900-55498976)
chr3 (202-300)||(16801468-16801566)
chr3 (199-256)||(18929246-18929303)
chr3 (11-145)||(12203357-12203490)
chr3 (202-258)||(13302241-13302297)
chr3 (202-258)||(13323788-13323844)
chr3 (11-51)||(23370297-23370337)
chr3 (11-69)||(41454905-41454961)
chr3 (202-308)||(10389444-10389550)
chr3 (202-308)||(10414533-10414639)
chr3 (202-308)||(10421203-10421309)
chr3 (102-159)||(31689679-31689736)
chr3 (102-159)||(31944490-31944547)
chr3 (202-258)||(12033445-12033501)
chr3 (202-258)||(13312897-13312953)
chr3 (202-258)||(17131730-17131786)
chr3 (202-258)||(51301587-51301643)
chr3 (188-229)||(3803836-3803877)
chr3 (45-141)||(42110275-42110370)
chr3 (187-232)||(43929413-43929458)
chr3 (202-258)||(14865844-14865900)
chr3 (94-145)||(14288082-14288132)
chr3 (190-220)||(6804880-6804910)
chr3 (199-229)||(12306085-12306115)
chr3 (102-163)||(18929336-18929398)
chr3 (202-236)||(23392820-23392854)
chr3 (91-145)||(35985767-35985820)
chr3 (187-252)||(10833294-10833359)
chr3 (199-256)||(16801029-16801086)
chr3 (199-236)||(52337953-52337990)
chr3 (102-145)||(18127628-18127672)
[»] scaffold0456 (2 HSPs)
scaffold0456 (11-284)||(8049-8320)
scaffold0456 (11-284)||(904-1175)
[»] scaffold0004 (3 HSPs)
scaffold0004 (35-285)||(116868-117117)
scaffold0004 (203-236)||(60441-60474)
scaffold0004 (189-229)||(385182-385221)
[»] scaffold0026 (8 HSPs)
scaffold0026 (202-308)||(111634-111740)
scaffold0026 (202-308)||(11851-11957)
scaffold0026 (11-145)||(121234-121367)
scaffold0026 (11-67)||(11654-11708)
scaffold0026 (34-145)||(143747-143854)
scaffold0026 (102-145)||(67303-67346)
scaffold0026 (190-220)||(10134-10164)
scaffold0026 (190-220)||(22210-22240)
[»] scaffold0146 (1 HSPs)
scaffold0146 (11-285)||(13604-13876)
[»] scaffold0124 (1 HSPs)
scaffold0124 (11-256)||(34085-34330)
[»] scaffold0106 (2 HSPs)
scaffold0106 (11-145)||(39579-39712)
scaffold0106 (190-232)||(22007-22049)
[»] scaffold0104 (2 HSPs)
scaffold0104 (11-145)||(12850-12983)
scaffold0104 (36-145)||(40644-40749)
[»] scaffold0076 (2 HSPs)
scaffold0076 (11-145)||(29011-29144)
scaffold0076 (11-145)||(34412-34545)
[»] scaffold0028 (4 HSPs)
scaffold0028 (11-145)||(45845-45978)
scaffold0028 (11-145)||(51249-51382)
scaffold0028 (11-254)||(69749-69991)
scaffold0028 (188-216)||(91726-91754)
[»] scaffold0025 (2 HSPs)
scaffold0025 (11-132)||(14206-14325)
scaffold0025 (204-308)||(14398-14503)
[»] scaffold0011 (2 HSPs)
scaffold0011 (11-145)||(173427-173560)
scaffold0011 (43-127)||(55778-55861)
[»] scaffold0924 (1 HSPs)
scaffold0924 (202-306)||(751-856)
[»] scaffold0053 (4 HSPs)
scaffold0053 (11-235)||(78903-79125)
scaffold0053 (202-258)||(79491-79547)
scaffold0053 (34-86)||(45719-45770)
scaffold0053 (34-86)||(71890-71941)
[»] scaffold0247 (1 HSPs)
scaffold0247 (202-308)||(11289-11396)
[»] scaffold0029 (3 HSPs)
scaffold0029 (202-308)||(111830-111937)
scaffold0029 (202-258)||(91203-91259)
scaffold0029 (202-258)||(96929-96985)
[»] scaffold0058 (2 HSPs)
scaffold0058 (202-308)||(240-345)
scaffold0058 (11-52)||(499-540)
[»] scaffold1773 (1 HSPs)
scaffold1773 (202-306)||(1129-1232)
[»] scaffold0006 (1 HSPs)
scaffold0006 (202-306)||(50130-50233)
[»] scaffold0107 (3 HSPs)
scaffold0107 (11-143)||(40351-40483)
scaffold0107 (202-256)||(40532-40586)
scaffold0107 (190-236)||(3905-3951)
[»] scaffold0553 (2 HSPs)
scaffold0553 (202-308)||(10196-10303)
scaffold0553 (11-51)||(9987-10027)
[»] scaffold0544 (2 HSPs)
scaffold0544 (202-308)||(1526-1633)
scaffold0544 (11-51)||(1317-1357)
[»] scaffold0154 (3 HSPs)
scaffold0154 (202-308)||(30805-30912)
scaffold0154 (11-216)||(17397-17602)
scaffold0154 (11-69)||(31054-31110)
[»] scaffold0117 (3 HSPs)
scaffold0117 (202-308)||(1898-2005)
scaffold0117 (202-308)||(8575-8682)
scaffold0117 (187-228)||(26057-26098)
[»] scaffold0610 (1 HSPs)
scaffold0610 (11-216)||(6540-6741)
[»] scaffold0235 (2 HSPs)
scaffold0235 (11-123)||(22411-22524)
scaffold0235 (203-255)||(22594-22646)
[»] scaffold0090 (2 HSPs)
scaffold0090 (202-308)||(18117-18224)
scaffold0090 (11-51)||(18380-18420)
[»] scaffold1992 (1 HSPs)
scaffold1992 (11-83)||(1-73)
[»] scaffold0796 (2 HSPs)
scaffold0796 (202-308)||(1733-1838)
scaffold0796 (202-308)||(5756-5861)
[»] scaffold0020 (1 HSPs)
scaffold0020 (29-285)||(101757-102011)
[»] scaffold0348 (2 HSPs)
scaffold0348 (35-122)||(14498-14584)
scaffold0348 (202-258)||(9334-9390)
[»] scaffold0129 (1 HSPs)
scaffold0129 (202-308)||(45275-45381)
[»] scaffold0077 (4 HSPs)
scaffold0077 (11-126)||(21272-21386)
scaffold0077 (11-88)||(3421-3496)
scaffold0077 (199-308)||(3619-3729)
scaffold0077 (182-229)||(22085-22132)
[»] scaffold0476 (3 HSPs)
scaffold0476 (11-88)||(3092-3167)
scaffold0476 (199-308)||(3290-3400)
scaffold0476 (11-51)||(2927-2967)
[»] scaffold0222 (1 HSPs)
scaffold0222 (199-285)||(16792-16878)
[»] scaffold0461 (1 HSPs)
scaffold0461 (199-285)||(5-91)
[»] scaffold0160 (1 HSPs)
scaffold0160 (11-88)||(16034-16109)
[»] scaffold0138 (1 HSPs)
scaffold0138 (191-256)||(12298-12363)
[»] scaffold0310 (1 HSPs)
scaffold0310 (202-256)||(17644-17698)
[»] scaffold0535 (1 HSPs)
scaffold0535 (21-88)||(5011-5076)
[»] scaffold0180 (2 HSPs)
scaffold0180 (34-145)||(13510-13617)
scaffold0180 (199-251)||(11630-11684)
[»] scaffold0139 (2 HSPs)
scaffold0139 (134-256)||(14931-15051)
scaffold0139 (69-145)||(1939-2015)
[»] scaffold0266 (2 HSPs)
scaffold0266 (34-145)||(24080-24188)
scaffold0266 (37-145)||(13525-13630)
[»] scaffold0127 (2 HSPs)
scaffold0127 (11-88)||(10430-10503)
scaffold0127 (202-258)||(10237-10293)
[»] scaffold1913 (1 HSPs)
scaffold1913 (20-88)||(1014-1080)
[»] scaffold0956 (1 HSPs)
scaffold0956 (186-243)||(2078-2135)
[»] scaffold0490 (2 HSPs)
scaffold0490 (72-145)||(5981-6053)
scaffold0490 (191-252)||(5883-5944)
[»] scaffold0031 (2 HSPs)
scaffold0031 (175-256)||(121904-121985)
scaffold0031 (175-256)||(132780-132861)
[»] scaffold0706 (1 HSPs)
scaffold0706 (101-145)||(2422-2466)
[»] scaffold0643 (1 HSPs)
scaffold0643 (11-51)||(8747-8787)
[»] scaffold0317 (1 HSPs)
scaffold0317 (102-265)||(1378-1539)
[»] scaffold0249 (3 HSPs)
scaffold0249 (11-51)||(2053-2093)
scaffold0249 (202-275)||(13895-13969)
scaffold0249 (34-145)||(5761-5872)
[»] scaffold0815 (1 HSPs)
scaffold0815 (198-253)||(1453-1508)
[»] scaffold0609 (1 HSPs)
scaffold0609 (202-273)||(5858-5929)
[»] scaffold0050 (1 HSPs)
scaffold0050 (34-127)||(13909-14002)
[»] scaffold0037 (2 HSPs)
scaffold0037 (169-216)||(71310-71357)
scaffold0037 (43-113)||(45439-45507)
[»] scaffold0001 (1 HSPs)
scaffold0001 (202-273)||(493029-493099)
[»] scaffold0429 (1 HSPs)
scaffold0429 (190-236)||(1988-2034)
[»] scaffold0069 (1 HSPs)
scaffold0069 (11-49)||(39636-39674)
[»] scaffold2054 (1 HSPs)
scaffold2054 (202-290)||(680-769)
[»] scaffold0096 (2 HSPs)
scaffold0096 (191-256)||(39496-39561)
scaffold0096 (11-145)||(3949-4083)
[»] scaffold1318 (1 HSPs)
scaffold1318 (202-258)||(1913-1969)
[»] scaffold0072 (2 HSPs)
scaffold0072 (11-51)||(57024-57064)
scaffold0072 (202-258)||(49971-50027)
[»] scaffold0023 (1 HSPs)
scaffold0023 (202-258)||(135436-135492)
[»] scaffold1461 (1 HSPs)
scaffold1461 (195-266)||(1478-1549)
[»] scaffold0506 (1 HSPs)
scaffold0506 (102-145)||(9293-9336)
[»] scaffold0149 (1 HSPs)
scaffold0149 (35-127)||(13951-14046)
[»] scaffold1032 (1 HSPs)
scaffold1032 (43-113)||(2635-2704)
[»] scaffold1290 (1 HSPs)
scaffold1290 (175-216)||(381-422)
[»] scaffold0669 (1 HSPs)
scaffold0669 (69-145)||(775-851)
[»] scaffold0335 (1 HSPs)
scaffold0335 (199-256)||(2625-2682)
[»] scaffold0309 (1 HSPs)
scaffold0309 (84-145)||(9236-9296)
[»] scaffold0261 (2 HSPs)
scaffold0261 (202-263)||(23570-23631)
scaffold0261 (35-113)||(8258-8335)
[»] scaffold0169 (1 HSPs)
scaffold0169 (187-256)||(6977-7046)
[»] scaffold0298 (1 HSPs)
scaffold0298 (197-237)||(618-658)
[»] scaffold0207 (1 HSPs)
scaffold0207 (186-230)||(9679-9722)
[»] scaffold0034 (1 HSPs)
scaffold0034 (204-264)||(73277-73337)
[»] scaffold0015 (1 HSPs)
scaffold0015 (101-145)||(170868-170912)
[»] scaffold0007 (1 HSPs)
scaffold0007 (72-127)||(206753-206809)
[»] scaffold0453 (1 HSPs)
scaffold0453 (202-273)||(10551-10622)
[»] scaffold0205 (1 HSPs)
scaffold0205 (46-113)||(28348-28413)
[»] scaffold0005 (1 HSPs)
scaffold0005 (34-109)||(17165-17238)
[»] scaffold1233 (1 HSPs)
scaffold1233 (11-65)||(1-55)
[»] scaffold0751 (1 HSPs)
scaffold0751 (11-97)||(1530-1614)
[»] scaffold0583 (1 HSPs)
scaffold0583 (91-145)||(5510-5563)
[»] scaffold0480 (1 HSPs)
scaffold0480 (199-229)||(1493-1523)
[»] scaffold0301 (1 HSPs)
scaffold0301 (11-113)||(4319-4419)
[»] scaffold0102 (1 HSPs)
scaffold0102 (11-113)||(30916-31016)
[»] scaffold0088 (1 HSPs)
scaffold0088 (11-45)||(22690-22724)
[»] scaffold0078 (1 HSPs)
scaffold0078 (43-113)||(16437-16505)
[»] scaffold0046 (1 HSPs)
scaffold0046 (91-145)||(71642-71695)
[»] scaffold0600 (1 HSPs)
scaffold0600 (199-256)||(734-791)
[»] scaffold0481 (1 HSPs)
scaffold0481 (203-248)||(676-721)
[»] scaffold0273 (1 HSPs)
scaffold0273 (199-236)||(7693-7730)
[»] scaffold0178 (1 HSPs)
scaffold0178 (89-145)||(26517-26573)
[»] scaffold0016 (1 HSPs)
scaffold0016 (187-232)||(174092-174137)
[»] scaffold0790 (1 HSPs)
scaffold0790 (91-127)||(5579-5615)
[»] scaffold0483 (1 HSPs)
scaffold0483 (195-266)||(11014-11086)
[»] scaffold0326 (2 HSPs)
scaffold0326 (180-216)||(4508-4544)
scaffold0326 (180-216)||(19690-19726)
[»] scaffold0131 (1 HSPs)
scaffold0131 (202-258)||(995-1051)


Alignment Details
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 23839444 - 23839146
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839444 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 23839345  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaag 210  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23839344 aaacatgttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaag 23839245  T
Q  211 ggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagt-tttggaaaataaattgagggttagggtttgatgatg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23839244 ggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtttgatgatg 23839146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 23058189 - 23058054
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgagg-aaaagaaaaggtcagaagcagttttacgt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||    
T  23058189 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaaagaaaaggtcacaagcagttttatgt 23058090  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||||||||||||| ||||||||||||    
T  23058089 gaaacaagttttgggagagaaaaccaagaacaaggg 23058054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 2286577 - 2286703
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  2286577 taattaggatttaataaaaattaagggagtttaatgaaataaagggggaattatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtg 2286676  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  2286677 aaacaagttttgggagagaaaaccaag 2286703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 933471 - 933603
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||     
T  933471 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttgagagttaggaaaagaaaaggtcagaagcagttttacgta 933570  T
Q  111 aaacaagttttgg-gagagaaaatcaagaacaag 143  Q
    ||||||||||||| ||| ||||| ||||||||||    
T  933571 aaacaagttttggagag-gaaaagcaagaacaag 933603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 23058000 - 23057887
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggtt 294  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  23058000 tctaaattaaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggtt 23057901  T
Q  295 agggtttgatgatg 308  Q
    ||||||||||||||    
T  23057900 agggtttgatgatg 23057887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 12943370 - 12943152
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||     
T  12943370 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgta 12943272  T
Q  111 aaacaagttttgggagag-aaaatcaagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||| |||| |||| ||||||| | ||||| ||||| ||| | || |||||||||  |||||| ||| ||| ||| ||||||||||    
T  12943271 aaacaagttttgggagagaaaaaccaaggacaagggagagaagagcaagtagagccaagggaatccgatcgttgtgcattt-ttcttctgaattaaggta 12943173  T
Q  209 agggtgagactatctctcaat 229  Q
    |||||||||||||||||||||    
T  12943172 agggtgagactatctctcaat 12943152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 256
Target Start/End: Complemental strand, 25397418 - 25397174
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||||  ||||||| |||  ||||| |||||||  |||||| |||||||||||||||||    
T  25397418 taattaggaattaatagaattaaggggagtttaatgaaataaaggga-agttatattttggggagttaggaaaaagaaaggttagaagcagttttacgtg 25397320  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggag-tcagagaatccgattattgtgcttttgttcatctaaattaaggtaa 209  Q
    |||||||||||||||||||||| |||||||||  | | ||||| ||||| ||| | | ||||||||||  |||||| ||| ||| ||| |||||||||||    
T  25397319 aaacaagttttgggagagaaaaccaagaacaaatgagagaagagcaagtagagctaaaagaatccgatcgttgtgcgttt-ttcttctgaattaaggtaa 25397221  T
Q  210 gggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||| ||| ||||| || |||||||| |||||||||||||||||    
T  25397220 gggtgaggctaactctcgatgatcataatatataatttctgaaaatt 25397174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 930096 - 930203
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  930096 taaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggttt 930195  T
Q  302 gatgatgt 309  Q
    ||||||||    
T  930196 gatgatgt 930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 4477915 - 4477805
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||    
T  4477915 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagg 4477816  T
Q  298 gtttgatgatg 308  Q
    |||||||||||    
T  4477815 gtttgatgatg 4477805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 18800488 - 18800385
Alignment:
Q  206 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaata-aattgagggttagggtttgat 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  18800488 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggtttgat 18800389  T
Q  305 gatg 308  Q
    ||||    
T  18800388 gatg 18800385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 29614147 - 29614254
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttgg-aaaataaattgagggttagggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||    
T  29614147 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggttagggtt 29614246  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  29614247 tgatgatg 29614254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 9187740 - 9187606
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaaggggg-agttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    ||||||||| |||||| || | | |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  9187740 taattaggaattaatagaattaaggggagtttaatgaaataaaggggggagttatagttttgggagttaggaaaagaaaaggtcagaatcagttttacgt 9187641  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaagg 144  Q
    |||||||||||||||||||||||  ||||||||||    
T  9187640 gaaacaagttttgggagagaaaacaaagaacaagg 9187606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 10986181 - 10986288
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtt 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  10986181 taaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 10986280  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  10986281 tgatgatg 10986288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 24512662 - 24512795
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcag-ttttacgt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||  ||||||| ||| ||||||||    
T  24512662 taattaggatttaataaaaattaagggagtttaatgaaataaaggaggagttatagttttgggagttaggaaaagaaagagtcagaatcagtttttacgt 24512761  T
Q  110 gaaacaagttttgg-gagagaaaatcaagaacaag 143  Q
    |||||||||||||| ||| ||||| ||||||||||    
T  24512762 gaaacaagttttggagag-gaaaaccaagaacaag 24512795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 12168417 - 12168312
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  12168417 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 12168319  T
Q  302 gatgatg 308  Q
    |||||||    
T  12168318 gatgatg 12168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 19287326 - 19287221
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  19287326 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19287228  T
Q  302 gatgatg 308  Q
    |||||||    
T  19287227 gatgatg 19287221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 19785870 - 19785975
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||| |||  ||||||||||    
T  19785870 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttagggttt 19785968  T
Q  302 gatgatg 308  Q
    |||||||    
T  19785969 gatgatg 19785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 19878510 - 19878405
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  19878510 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19878412  T
Q  302 gatgatg 308  Q
    |||||||    
T  19878411 gatgatg 19878405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 29483266 - 29483367
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatc 134  Q
    ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  29483266 gggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaacc 29483364  T
Q  135 aag 137  Q
    |||    
T  29483365 aag 29483367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 19884286 - 19884181
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  19884286 taaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19884188  T
Q  302 gatgatg 308  Q
    |||||||    
T  19884187 gatgatg 19884181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 34639987 - 34640069
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataa 284  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34639987 taaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 34646661 - 34646743
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataa 284  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  34646661 taaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 307
Target Start/End: Original strand, 25469705 - 25469808
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||||||||||||  |||   |||||||||    
T  25469705 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggttt 25469802  T
Q  302 gatgat 307  Q
    ||||||    
T  25469803 gatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 21565010 - 21565086
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| || ||||||||    
T  21565010 taattaggatttaataaaaattaagggagtttaatgaaat-aggggggagttatagttttgggagttagaaaaagaaa 21565086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 5288908 - 5288983
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaa 87  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  5288908 taattaggatttaataataattaaaggagtttaatgaaat-aagggggagttatagttttgggagttaggaaaagaa 5288983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 18800690 - 18800634
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttt 69  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  18800690 taattaggatttaataaaaattaagggagtttaatgaaat--agggggagttatagttt 18800634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 9187553 - 9187498
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 254  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187553 aattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 18787262 - 18787158
Alignment:
Q  41 ttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaag-gtcagaagcagttttacgtgaaac-aagttttgggagagaaaatcaaga 138  Q
    ||||||||||||  ||||||||||| ||| |||||| ||||||||||||| |||||||    ||||||||||||| ||| |||||||||||||| |||||    
T  18787262 ttaatgaaataa--ggggagttatattttgaggagttaggaaaagaaaagagtcagaactgcttttacgtgaaaccaagctttgggagagaaaaccaaga 18787165  T
Q  139 acaaggg 145  Q
    |||||||    
T  18787164 acaaggg 18787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 24441719 - 24441673
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  24441719 gttcatctaaattaaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 24512844 - 24512898
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  24512844 taaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaatt 24512898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 25348545 - 25348488
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||    
T  25348545 aattaaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaatt 25348488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 29613952 - 29613993
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataa 52  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29613952 taattaggatttaataaaaattaagggagtttaatgaaataa 29613993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 4478126 - 4478086
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4478126 taattaggatttaataaaaattaagggagtttaatgaaata 4478086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 8767115 - 8767159
Alignment:
Q  101 gttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  8767115 gttttacgtgaaacaagttttgggagagaaaaccaagaacaaggg 8767159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 14615340 - 14615384
Alignment:
Q  101 gttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  14615340 gttttacgtgaaacaagttttgggagagaaaaccaagaacaaggg 14615384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 19287519 - 19287462
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  19287519 taattagaatttaataaaaattaagggagtttaatgtaat--agggggagttatagtttt 19287462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 25598882 - 25598842
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25598882 taattaggatttaataaaaattaagggagtttaatgaaata 25598842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 28288316 - 28288394
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaag 90  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||    
T  28288316 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaag 28288394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 31252477 - 31252406
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagtt 273  Q
    |||||||||||||||| ||||| | ||| || ||||| ||||||||||||||||||| ||||||| ||||||    
T  31252477 taaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagtt 31252406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 21565209 - 21565319
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagg 297  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||| |||||||||| ||   |||   |  |||||||||||||||    
T  21565209 aattcaggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagg 21565308  T
Q  298 gtttgatgatg 308  Q
    |||||||||||    
T  21565309 gtttgatgatg 21565319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 2709566 - 2709521
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaaggg 56  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  2709566 taattaggatttaataagaattaagggagtttaatgaaatataggg 2709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 11288669 - 11288758
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagttttggaaaataaattgag 290  Q
    ||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||||||||||  | |||||| | ||||||||||||||    
T  11288669 taaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 11288758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 25598702 - 25598645
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||| ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  25598702 aattcaggtaagggtgagactaactctcaatgatcataatatatattttctgaaaatt 25598645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 12168610 - 12168553
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| |||||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  12168610 taattagaatttaataaaaattaatggagtttaatgtaat--agggggagttatagtttt 12168553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 19785685 - 19785734
Alignment:
Q  19 atttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  19785685 atttaataaaaattaagggagtttaatgtaat--agggggagttatagtttt 19785734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 18659487 - 18659450
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18659487 aattaaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 19471332 - 19471389
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||| ||| ||||| || |||||||| ||||||||||| |||||    
T  19471332 aattaaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaatt 19471389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 15458544 - 15458469
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg--aaaattaacctaattgcatagtttt 275  Q
    ||||||||||||| || ||||| ||||| || ||||| |||||||||||  |||||||| ||||||| ||||||||    
T  15458544 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaaattaatctaattgaatagtttt 15458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 15465139 - 15465064
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg--aaaattaacctaattgcatagtttt 275  Q
    ||||||||||||| || ||||| ||||| || ||||| |||||||||||  |||||||| ||||||| ||||||||    
T  15465139 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaaattaatctaattgaatagtttt 15465064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 19884478 - 19884422
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| ||||||||||| |||||||||||||||| |||  ||||||||||||||||||    
T  19884478 taattagaatttaataaaa-ttaagggagtttaatgtaat--agggggagttatagtttt 19884422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 9184983 - 9185025
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaat 229  Q
    ||||||||||| |||| |||||||||||||||||||||||||||    
T  9184983 ttttgttcatc-aaatcaaggtaagggtgagactatctctcaat 9185025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 2286764 - 2286821
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||| ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||    
T  2286764 aattcaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 2286821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 29415542 - 29415591
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||| ||| ||||||||| ||||| ||| |||||||||||||||    
T  29415542 tttgttcatcaaaactaaggtaagagtgaggctaactctcaataatcata 29415591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 19878702 - 19878646
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| ||||||||| | |||||||||||||||| ||||  |||||||||||||||||    
T  19878702 taattagaatttaataaca-ttaagggagtttaatgtaata--gggggagttatagtttt 19878646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 21477339 - 21477299
Alignment:
Q  188 ttgttcatctaaattaaggtaagggtgagactatctctcaa 228  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  21477339 ttgttcgtctgaattaaggtaagggtgagactatctttcaa 21477299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 14423231 - 14422932
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaa-gaaaaggtcagaagcagttttacgt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423231 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaaagaaaaggtcagaagcagttttacgt 14423132  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  14423131 gaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattgttgtgtttttgttcatctaaactaaggtaa 14423032  T
Q  210 gggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtttgatgatg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  14423031 gggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatgatg 14422932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 18873604 - 18873309
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  18873604 taattaggatttaataaaaattaagggagtttaatgaaata--ggggaagttatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtg 18873507  T
Q  111 aaacaagttttgggagagaaaatcaagaacaa--gggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||||||| |||||| ||  ||| | |||||||||||  ||||||||||||||    |||||| ||| |||    ||| |||||||    
T  18873506 aaacaagttttgggagagaaaaccaagaaaaagggggagagaagaacaagtatagtcagagaatccggccgttgtgcgtttcttc--taaaactaaggta 18873409  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 308  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18873408 agggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatg 18873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 14113580 - 14113406
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaa-gaaaaggtcagaagcagttttacgt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14113580 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaaagaaaaggtcagaagcagttttacgt 14113481  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14113480 gaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattgttgtg 14113406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 15168237 - 15168124
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggtt 294  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  15168237 tctaaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtt 15168138  T
Q  295 agggtttgatgatg 308  Q
    ||||||||||||||    
T  15168137 agggtttgatgatg 15168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 19617606 - 19617473
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  19617606 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 19617508  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  19617507 aaacaagttttgggagagaaaaccaagaacaaggg 19617473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 16009634 - 16009525
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttaggg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||| ||    
T  16009634 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaagg 16009535  T
Q  299 tttgatgatg 308  Q
    ||||||||||    
T  16009534 tttgatgatg 16009525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 12709844 - 12709949
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  12709844 taaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggttt 12709942  T
Q  302 gatgatg 308  Q
    |||||||    
T  12709943 gatgatg 12709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 13122915 - 13123020
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  13122915 taaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggttt 13123013  T
Q  302 gatgatg 308  Q
    |||||||    
T  13123014 gatgatg 13123020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 13743763 - 13743658
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  13743763 taaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggttt 13743665  T
Q  302 gatgatg 308  Q
    |||||||    
T  13743664 gatgatg 13743658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 10895788 - 10895898
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagg 297  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||| ||||||||    
T  10895788 aattaacgtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagg 10895887  T
Q  298 gtttgatgatg 308  Q
    |||||||||||    
T  10895888 gtttgatgatg 10895898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 21230778 - 21230911
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcag-ttttacgt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||| ||| ||||||||    
T  21230778 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaagagtcagaatcagtttttacgt 21230877  T
Q  110 gaaacaagttttgg-gagagaaaatcaagaacaag 143  Q
     ||||||||||||| ||| ||||| ||||||||||    
T  21230878 taaacaagttttggagag-gaaaaccaagaacaag 21230911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 11304428 - 11304210
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| | ||||||| |||| ||||| ||||||||| ||||| |||||||||||||||||    
T  11304428 taattaggaattaatagaattaaggggagtttaatgaaataaaggagaagttata-ttttgggagttaggaaaagagaaggttagaagcagttttacgtg 11304330  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgg--gaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggt 207  Q
    |||||||||||||||||||||| ||||  ||||||  |   |||| ||||| ||| | || |||||||||  |||||| ||| ||| ||| |||||||||    
T  11304329 aaacaagttttgggagagaaaaccaag-ccaaggggagaacaagagcaagtagagccaagggaatccgatcgttgtgcattt-ttcttctgaattaaggt 11304232  T
Q  208 aagggtgagactatctctcaat 229  Q
    ||||||||||||||||||||||    
T  11304231 aagggtgagactatctctcaat 11304210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 11382680 - 11382925
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca-gttttacgt 109  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||  |||||||  | |||| ||||    
T  11382680 taattaggatttaataaaaattaagggagtttaatgaa--aaagggggagttatagttttgggagttaggaaaagaaagagtcagaaaaacgtttcacgt 11382777  T
Q  110 -gaaacaagttttgggaga-gaaaatcaagaacaa-gggtgggaagaacaagtggagtcagagaatccgattattgtg-cttttgttcatctaaattaag 205  Q
      ||||||||||||||||| || || ||||| ||| ||| | ||||||||||| ||| || |||||||  ||  |||| | |  | |   || |||||||    
T  11382778 aaaaacaagttttgggagaggagaaccaagagcaaggggagagaagaacaagtagagcca-agaatcc--ttcgtgtgtcgtgcgatttcctgaattaag 11382874  T
Q  206 gtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11382875 gtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11382925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 16677353 - 16677242
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaat-aaattgagggttag 296  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| || ||||| ||||||||    
T  16677353 aattcaggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttag 16677254  T
Q  297 ggtttgatgatg 308  Q
    ||||||||||||    
T  16677253 ggtttgatgatg 16677242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 17651589 - 17651478
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaat-aaattgagggttag 296  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| || ||||| ||||||||    
T  17651589 aattcaggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttag 17651490  T
Q  297 ggtttgatgatg 308  Q
    ||||||||||||    
T  17651489 ggtttgatgatg 17651478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 12590644 - 12590749
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  12590644 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggttt 12590742  T
Q  302 gatgatg 308  Q
    |||||||    
T  12590743 gatgatg 12590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 13007486 - 13007381
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  13007486 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 13007388  T
Q  302 gatgatg 308  Q
    |||||||    
T  13007387 gatgatg 13007381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 23663936 - 23664061
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||| ||||| |||||||||||||||||    
T  23663936 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagagaaggttagaagcagttttacgtg 23664034  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  23664035 aaacaagttttgggagagaaaaccaag 23664061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 29797790 - 29797665
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| | ||||||| |||| ||||| ||||||||| ||||| |||||||||||||||||    
T  29797790 taattaggaattaatagaattaaggggagtttaatgaaataaaggagaagttata-ttttgggagttaggaaaagagaaggttagaagcagttttacgtg 29797692  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  29797691 aaacaagttttgggagagaaaaccaag 29797665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 29801609 - 29801484
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| | ||||||| |||| ||||| ||||||||| ||||| |||||||||||||||||    
T  29801609 taattaggaattaatagaattaaggggagtttaatgaaataaaggagaagttata-ttttgggagttaggaaaagagaaggttagaagcagttttacgtg 29801511  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  29801510 aaacaagttttgggagagaaaaccaag 29801484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 11389157 - 11389402
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca-gttttacgt 109  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||  |||||||  | |||| ||||    
T  11389157 taattaggatttaataaaaattaagggagtttaatgaa--aaagggggagttatagttttgggagttaggaaaagaaagagtcagaaaaacgtttcacgt 11389254  T
Q  110 -gaaacaagttttgggaga-gaaaatcaagaacaa-gggtgggaagaacaagtggagtcagagaatccgattattgtg-cttttgttcatctaaattaag 205  Q
      |||| |||||||||||| || || ||||| ||| |||   ||||||||||| ||| || |||||||  ||  |||| | |  | |   || |||||||    
T  11389255 aaaaaccagttttgggagaggagaaccaagagcaaggggatagaagaacaagtagagcca-agaatcc--ttcgtgtgtcgtgcgatttcctgaattaag 11389351  T
Q  206 gtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11389352 gtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11389402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 4281359 - 4281228
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagtttt-acgt 109  Q
    |||||||||||||||| || | | ||||||| ||||||||||||||| |||||||||||  ||||| |||||||||||||| ||||||||||||| ||||    
T  4281359 taattaggatttaatagaattaaggggagtt-aatgaaataaagggg-agttatagtttg-ggagttaggaaaagaaaagg-cagaagcagtttttacgt 4281264  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||||||||||||| |||||| |||||    
T  4281263 gaaacaagttttgggagagaaaaccaagaataaggg 4281228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 16677552 - 16677476
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| || ||||||||    
T  16677552 taattaggatttaataaaaattaagggagtttaatgaaat-aggggggagttatagttttgggagttagaaaaagaaa 16677476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 17651788 - 17651712
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| || ||||||||    
T  17651788 taattaggatttaataaaaattaagggagtttaatgaaat-aggggggagttatagttttgggagttagaaaaagaaa 17651712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 20310868 - 20310926
Alignment:
Q  11 taattaggatttaataaaa-attaagggagtttaatgaaataaagggggagttatagtt 68  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  20310868 taattaggatttaataaaaaattaagggagtttaatgaaataaaggaggagttatagtt 20310926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 20311052 - 20311106
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  20311052 taaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaatt 20311106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 21230960 - 21231014
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  21230960 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 21231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 36305145 - 36305202
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagt 159  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||    
T  36305145 ttttacgtgaaacaagttttgggagagaaaaccaagaataagggggagaagaacaagt 36305202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 148870 - 148830
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  148870 taattaggatttaataaaaattaagggagtttaatgaaata 148830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 12590451 - 12590508
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  12590451 taattagaatttaataaaaattaagggagtttaatgtaat--agggggagttatagtttt 12590508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 13007679 - 13007622
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  13007679 taattagaatttaataaaaattaagggagtttaatgtaat--agggggagttatagtttt 13007622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 13679646 - 13679485
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatc-aagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaa 199  Q
    ||||||||||||||||||||||||||||||| | |||||| | || | ||||||||||| ||| || ||  ||||||||   |||    ||||  ||| |    
T  13679646 ttttacgtgaaacaagttttgggagagaaaaaccaagaactaaggagagaagaacaagtagagccaagatcatccgattgccgtg----tgtttttctga 13679551  T
Q  200 attaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaatt 265  Q
    | |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||| | ||||||    
T  13679550 aataaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 14567470 - 14567430
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14567470 taattaggatttaataaaaattaagggagtttaatgaaata 14567430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 11311116 - 11311057
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||||    
T  11311116 aattaaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaattaa 11311057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 19153039 - 19152934
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| ||||||||||||||  ||||| ||| || ||||| ||||||||   | |||||||||||||| |||| ||||||||||||||||| ||||     
T  19153039 agggagttaaatgaaataaaggg--agtta-agtattgggagttaggaaaaggggaagtcagaagcagtttcacgtaaaacaagttttgggaga-aaaac 19152944  T
Q  134 caagaacaag 143  Q
    ||||||||||    
T  19152943 caagaacaag 19152934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 20752438 - 20752333
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| ||||||||||||||  ||||| ||| || ||||| ||||||||   | |||||||||||||| |||| ||||||||||||||||| ||||     
T  20752438 agggagttaaatgaaataaaggg--agtta-agtattgggagttaggaaaaggggaagtcagaagcagtttcacgtaaaacaagttttgggaga-aaaac 20752343  T
Q  134 caagaacaag 143  Q
    ||||||||||    
T  20752342 caagaacaag 20752333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 10520961 - 10520878
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg-aaacaagttttgggaga 127  Q
    ||||||||||||||| ||||||| |||  ||||| ||||||||| ||| | ||||||||||||||||| |||||||||||||||||    
T  10520961 aatgaaataaagggg-agttatattttagggagttaggaaaagagaag-taagaagcagttttacgtgaaaacaagttttgggaga 10520878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 2971308 - 2971252
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  2971308 taaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaattaa 2971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 20906462 - 20906518
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  20906462 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 20906518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 13665073 - 13664975
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggag-tgaggaaaagaaaaggtcag-aagcagttttacgtgaaacaagttttgggagagaaaa 132  Q
    ||||||||||||||||||| ||||||||||  ||||||||| | || |||||| || ||||| || |  |||||||||||||||||||||||||| ||||    
T  13665073 gggagtttaatgaaataaa-ggggagttattattttaggagttaagaaaaagagaaagtcagaaaacgtttttacgtgaaacaagttttgggagaaaaaa 13664975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 15103338 - 15103422
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaa--caagttttgggaga 127  Q
    ||||||||||||||| ||||||| |||  ||||| ||||||||| ||| ||||||||||||||||||||||   |||||||||||||    
T  15103338 aatgaaataaagggg-agttatattttggggagttaggaaaagagaag-tcagaagcagttttacgtgaaaacaaagttttgggaga 15103422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 831619 - 831669
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcataa 237  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  831619 tttgttcatcaaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 1196799 - 1196849
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcataa 237  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  1196799 tttgttcatcaaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 34958628 - 34958578
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcataa 237  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  34958628 tttgttcatcaaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 41780943 - 41780996
Alignment:
Q  91 gtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  41780943 gtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaaggg 41780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 39431171 - 39431216
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||    
T  39431171 tttgttcatctaaattaaggtaagggtgaggctaactttcaataat 39431216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 45186502 - 45186461
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  45186502 gatttttgtgcttttgttcatctgaattaaggtaagggtgag 45186461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 46626020 - 46625963
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||    
T  46626020 aattaagataagggtgagactaactctcaatgattataatatataatttcggaaaatt 46625963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 29181110 - 29181166
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||||    
T  29181110 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaa 29181166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 23461621 - 23461664
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatc 233  Q
    ||||||||||||||||||||||||||||||| |  |||||||||    
T  23461621 gttcatctaaattaaggtaagggtgagactaacattcaataatc 23461664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 19146718 - 19146613
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| ||||||||||||||  ||||| ||| || ||||| ||||||||   | |||||||||||| | |||| ||||||||||| ||||| ||||     
T  19146718 agggagttaaatgaaataaaggg--agtta-agtattgggagttaggaaaaggggaagtcagaagcagtatcacgtaaaacaagtttttggaga-aaaac 19146623  T
Q  134 caagaacaag 143  Q
    ||||||||||    
T  19146622 caagaacaag 19146613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 20746117 - 20746012
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| ||||||||||||||  ||||| ||| || ||||| ||||||||   | |||||||||||| | |||| ||||||||||| ||||| ||||     
T  20746117 agggagttaaatgaaataaaggg--agtta-agtattgggagttaggaaaaggggaagtcagaagcagtatcacgtaaaacaagtttttggaga-aaaac 20746022  T
Q  134 caagaacaag 143  Q
    ||||||||||    
T  20746021 caagaacaag 20746012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 31155448 - 31155374
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagtttt 275  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||||| ||| ||| ||||||||    
T  31155448 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaattaatctagttgaatagtttt 31155374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 14319630 - 14319691
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaa 263  Q
    ||||||||||||| || ||||| ||||| ||  |||| ||||||||||||||||||| ||||    
T  14319630 taaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatctaa 14319691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 40554515 - 40554552
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  40554515 aattaaggtaagggtgaggctaactctcaataatcata 40554552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 13664910 - 13664874
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcat 235  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  13664910 aattaaggtaagggtgagactatctttcaatgatcat 13664874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 16091129 - 16091073
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||| ||||    
T  16091129 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaagttaa 16091073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 23111009 - 23111283
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23111009 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 23111108  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaag 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23111109 aaacaaggtttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaag 23111208  T
Q  211 ggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| | ||||||| || ||| | |||||||||    
T  23111209 ggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaa 23111283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 308
Target Start/End: Original strand, 28369864 - 28370161
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  28369864 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 28369962  T
Q  111 aaacaagttttgggagagaaaatc-aagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||||||| | ||| ||||||| | ||||| ||||| ||| || | ||||| |||  |||||| ||| ||| ||| ||||||||||    
T  28369963 aaacaagttttgggagagaaaaaccaaggacaagggagagaagagcaagtagagccaagggaatctgatcgttgtgcattt-ttcttctgaattaaggta 28370061  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370062 agggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 28370161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 22751385 - 22751090
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||  |||| |||||||||||| ||||||||||||||||||||    
T  22751385 taattaggatttaataaaaattaagggagtttaatgaaa--aaggggaagttatagttttgagagttaggaaaagaaaaagtcagaagcagttttacgtg 22751288  T
Q  111 aaacaagttttgggagagaaaatcaagaacaa--gggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    ||||||||||| |||||||||| ||| |||||  ||| | |||||||||||  |||||||||||||| |  |||||| ||| |||    ||| |||||||    
T  22751287 aaacaagttttaggagagaaaaccaataacaagggggagagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttc--taaaactaaggta 22751190  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 308  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22751189 agggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatg 22751090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 19512631 - 19512334
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  19512631 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 19512533  T
Q  111 aaacaagttttgggagagaaaatc-aagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||||||| | ||| ||||||| | ||||| ||||| ||| || | ||||| |||  |||||| |||  || ||| ||||||||||    
T  19512532 aaacaagttttgggagagaaaaaccaaggacaagggagagaagagcaagtagagccaagggaatctgatcgttgtgcattt--tcttctgaattaaggta 19512435  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtttgatgat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  19512434 agggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatgat 19512335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 38144345 - 38144466
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  38144345 taattaggatttaataaaaattaagggagtttaatgaaataaaggggaagttatagttttgggagttaggaaaagaaaaggtcaaaagcagttttacgtg 38144444  T
Q  111 aaacaagttttgggagagaaaa 132  Q
    ||||||||||||||||||||||    
T  38144445 aaacaagttttgggagagaaaa 38144466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 38144537 - 38144643
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  38144537 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 38144636  T
Q  302 gatgatg 308  Q
    |||||||    
T  38144637 gatgatg 38144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 22006699 - 22006833
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||| |||||||| || | | |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||     
T  22006699 taattagaatttaatagaattaaggggagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaaggtgagaagcagttttacgta 22006798  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  22006799 aaacaagttttgggagagaaaaccaagaacaaggg 22006833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 22337771 - 22337647
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  22337771 taattaggatctaataaaaattaagggagtttaatgaaa--aaggggaagttatagttttgggagttaggaaaggaaaaggtcagaagcagttttacgtg 22337674  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  22337673 aaacaagttttgggagagaaaaccaag 22337647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 22341309 - 22341185
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  22341309 taattaggatctaataaaaattaagggagtttaatgaaa--aaggggaagttatagttttgggagttaggaaaggaaaaggtcagaagcagttttacgtg 22341212  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  22341211 aaacaagttttgggagagaaaaccaag 22341185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 37803885 - 37804102
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| |||||| |||||||| |||||||||||||||||    
T  37803885 taattaggaattaatagaattgaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaggaaaaggttagaagcagttttacgtg 37803983  T
Q  111 aaacaagttttgggagag-aaaatcaagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||| |||| |||| ||||||| | ||||| ||||| ||| | || |||| ||||  |||||| ||| ||| ||| ||||||||||    
T  37803984 aaacaagttttgggagagaaaaaccaaggacaagggagagaagagcaagtagagccaagggaat-cgatcgttgtgcattt-ttcttctgaattaaggta 37804081  T
Q  209 agggtgagactatctctcaat 229  Q
    |||| ||||||||||||||||    
T  37804082 agggcgagactatctctcaat 37804102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 23528887 - 23528755
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||  |||| |||||||||||  ||||||||||||||||||||    
T  23528887 taattagaatttaataaaaattaagggagattaatgaaata--gggggagttatagttttgagagttaggaaaagaaagagtcagaagcagttttacgtg 23528790  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||| |||||| |||||||||| ||||||||||||    
T  23528789 aaaccagttttaggagagaaaaccaagaacaaggg 23528755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 41875404 - 41875620
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| |||| |||| |||| ||||| |||||||||||| || ||||| ||||| |||||    
T  41875404 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagatata-ttttgggagttaggaaaagaaaatgttagaagaagtttcacgtg 41875502  T
Q  111 aaacaagttttgggagag-aaaatcaagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||| |||| |||| ||||||| | ||||| ||||| ||| | || |||||||||  |||||| ||| ||| ||| ||||||||||    
T  41875503 aaacaagttttgggagagaaaaaccaaggacaagggagagaagagcaagtagagccaagggaatccgatcgttgtgcattt-ttcttctgaattaaggta 41875601  T
Q  209 agggtgagactatctctca 227  Q
    ||||||||||| |||||||    
T  41875602 agggtgagactctctctca 41875620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 9777344 - 9777219
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||| ||||| |||||||||||||||||    
T  9777344 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagagaaggtgagaagcagttttacgtg 9777246  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  9777245 aaacaagttttgggagagaaaaccaag 9777219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 23528685 - 23528580
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  23528685 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 23528587  T
Q  302 gatgatg 308  Q
    |||||||    
T  23528586 gatgatg 23528580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 18407941 - 18408027
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| || ||| | |||||||||    
T  18407941 aattaaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataaa 18408027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 21900843 - 21900952
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| ||||||||||||||||||||| ||| || ||||| ||||||||| || |||||||| ||||| |||| ||||||||||||||||| ||||     
T  21900843 agggagttaaatgaaataaagggggagtta-agtgttgggagttaggaaaagagaaagtcagaagtagtttcacgtaaaacaagttttgggaga-aaaac 21900940  T
Q  134 caagaacaaggg 145  Q
    ||||||||||||    
T  21900941 caagaacaaggg 21900952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 22438567 - 22438626
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22438567 taattaggatttaataaaaattaagggagtttaatgaaataaaggaggagttatagtttt 22438626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 22438748 - 22438802
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22438748 taaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaatt 22438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 42961818 - 42961778
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42961818 taattaggatttaataaaaattaagggagtttaatgaaata 42961778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 8952029 - 8952075
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  8952029 gttcatctaaattaaggtaagggtgaggctaactctcaataatcata 8952075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 19236954 - 19236898
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  19236954 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 19236898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 22777058 - 22777104
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||    
T  22777058 gttcatctgaattaaggtaagggtgaggctaactctcaataatcata 22777104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 20781798 - 20781742
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||||    
T  20781798 taaggtaagggtgggattatctttcaataattataatatatgatttctgaaaattaa 20781742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 22461210 - 22461158
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 254  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461210 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 22467834 - 22467782
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 254  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467834 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 10817876 - 10817814
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 252  Q
    |||||||| |||||||||||||||||||||| |  ||| |||||||| | ||||| |||||||    
T  10817876 gttcatctgaattaaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaa 10817814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 26707439 - 26707397
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaat 229  Q
    |||||||||| |||| |||||||||||||||||| ||||||||    
T  26707439 tttgttcatcaaaatcaaggtaagggtgagactaactctcaat 26707397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 26977173 - 26977131
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaat 229  Q
    |||||||||| |||| |||||||||||||||||| ||||||||    
T  26977173 tttgttcatcaaaatcaaggtaagggtgagactaactctcaat 26977131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 22337585 - 22337524
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||| |  ||||| || ||||| |||  ||||||||||||    
T  22337585 tctaaattaaggtaagggtgagactaaccttcaatgattataatatatggtttctgaaaatt 22337524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 17021914 - 17021942
Alignment:
Q  202 taaggtaagggtgagactatctctcaata 230  Q
    |||||||||||||||||||||||||||||    
T  17021914 taaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 20773023 - 20772967
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||||||    
T  20773023 taaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaattaa 20772967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 34830138 - 34830035
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaat-aaattgagggttagggtt 300  Q
    ||||||||||||| || ||||| ||||||||  |||| |||||||||||||||| || ||||| | |||||| | ||| || ||||||||  |||||||     
T  34830138 taaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattgagaattagggta 34830040  T
Q  301 tgatg 305  Q
    |||||    
T  34830039 tgatg 34830035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 308
Target Start/End: Original strand, 20436836 - 20437131
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaa-gaaaaggtcagaagcagttttacgt 109  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  20436836 taattgggatttaataaaaattaagggagtttaatgaa-taaagggg-agttatagttt-aggagtgaggaaaaagaaaaggtcataagcagttttacgt 20436932  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaa 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20436933 gaaacaagttt-gggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaa 20437031  T
Q  210 gggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtttgatgatg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20437032 gggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatgatg 20437131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 35 - 266
Target Start/End: Complemental strand, 32651793 - 32651563
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaa-gaaaaggtcagaagcagttttacgtgaaa-caagttttgggagagaaaa 132  Q
    |||||||||||||||||| |||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32651793 gggagtttaatgaaataa-gggggagttatagttttgagagttaggaaaaagaaaaggtcagaagcagttttacgtgaaaacaagttttgggagagaaaa 32651695  T
Q  133 tcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
     ||||||||| |||| |||||||||||||||||||||||||||||  |||||  |||  || ||||||||||||||||||||||||||||||||||||||    
T  32651694 ccaagaacaatggtgagaagaacaagtggagtcagagaatccgatcgttgtgtgttt--tcttctaaattaaggtaagggtgagactatctctcaataat 32651597  T
Q  233 cataatctataatttctgaaaattaacctaattg 266  Q
    |||| | ||||||||||||||||| | |||||||    
T  32651596 catagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 19663326 - 19663571
Alignment:
Q  11 taattaggatttaataaaa-attaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||    
T  19663326 taattaggatttaataaaaaattaagggagtttaatgaaataaaggaggagttatagttttgggagttaggaaaagaaatggttagaagcagttttacgt 19663425  T
Q  110 gaaacaagttttgggagagaa-aatcaagaacaa-gggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaagg 206  Q
    |||||||||||||||||| || || ||||||||| ||| | ||||||||||| ||| | |||  | |||  | | ||||  |  |||  || || |||||    
T  19663426 gaaacaagttttgggagaaaagaaccaagaacaaggggagagaagaacaagtagagccaagatcacccgtgtgtcgtgcgat--ttc--ctgaaataagg 19663521  T
Q  207 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  19663522 taagggtgagactatctctcgataatcatagtatataatttctgaaaatt 19663571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 21543367 - 21543234
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  21543367 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 21543269  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  21543268 aaacaagttttgggagagaaaaccaagaacaaggg 21543234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 16373209 - 16373102
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  16373209 taattaggatttaataaaaattaagggagtttaatgaaa--aaggggaagttatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtg 16373112  T
Q  111 aaacaagttt 120  Q
    ||||||||||    
T  16373111 aaacaagttt 16373102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 42094774 - 42094903
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||| ||||||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  42094774 taattaggatttaatagaattaaggggagtt-aatgaaataaagggg-agttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 42094870  T
Q  111 aaacaagttttgggagagaaaatcaagaacaag 143  Q
    |||||||||||||||||||||| ||||||||||    
T  42094871 aaacaagttttgggagagaaaaccaagaacaag 42094903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 41112089 - 41111984
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||  |||  ||||||||||    
T  41112089 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttagggttt 41111991  T
Q  302 gatgatg 308  Q
    |||||||    
T  41111990 gatgatg 41111984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 256
Target Start/End: Complemental strand, 11158310 - 11158094
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagag-aaaat 133  Q
    ||||||||||||||||||||||  ||||||| |||  ||||| ||||||||||| |||||||| |  ||||||||||||||||||||||||||| ||||     
T  11158310 gggagtttaatgaaataaaggg--agttatattttggggagttaggaaaagaaa-ggtcagaaacgtttttacgtgaaacaagttttgggagagaaaaac 11158214  T
Q  134 caagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    ||||||| |||| | ||||||| ||| ||| | |||  ||||||||   ||||    |||  ||| |||||||||||||||||||||| |||||||| ||    
T  11158213 caagaactagggagagaagaactagtagagccaagatcatccgattgccgtgc----gtttttctgaattaaggtaagggtgagactaactctcaatgat 11158118  T
Q  233 cataatctataatttctgaaaatt 256  Q
    | |||| |||||||||||||||||    
T  11158117 cttaatatataatttctgaaaatt 11158094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 20850212 - 20850112
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaa 142  Q
    ||||||||||||||| ||||||| |||  ||||| ||||||||| ||| ||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  20850212 aatgaaataaagggg-agttatattttggggagttaggaaaagagaag-tcagaagcagttttatgtaaaacaagttttgggagagaaaaccaagaacaa 20850115  T
Q  143 ggg 145  Q
    |||    
T  20850114 ggg 20850112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 18712857 - 18712790
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattg 266  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| | |||||||    
T  18712857 aattaaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 29553415 - 29553548
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca--gttttacg 108  Q
    ||||||| |||||||| || ||||||||||||||||||||| ||||  ||||| | |||  ||||| | |||||||||  |||| ||| |  ||||||||    
T  29553415 taattagaatttaatagaa-ttaagggagtttaatgaaatataggga-agttacattttggggagttaagaaaagaaagagtca-aagaaacgttttacg 29553511  T
Q  109 tgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29553512 tgaaacaagttttgggagagaaaaccaagaacaaggg 29553548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 21736345 - 21736198
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaa-tgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    |||||||||||||||| || ||||||| |  ||| ||||||||  ||||||||||| ||| |||||| |||||||||||  |||||||    ||||||||    
T  21736345 taattaggatttaatagaa-ttaagggggagtaaatgaaataa--ggggagttatattttgaggagttaggaaaagaaagagtcagaactgcttttacgt 21736249  T
Q  110 gaaac-aagttttgggagagaaaatcaagaacaagggtgggaagaacaagt 159  Q
    ||||| ||| |||||||||||||| |||||||||||| | ||||| |||||    
T  21736248 gaaaccaagctttgggagagaaaaccaagaacaagggagagaagagcaagt 21736198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 11140074 - 11140208
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaa-tgaaataaagggggagttatagttttaggagtgaggaaaagaaaag-gtcagaagcagttttacg 108  Q
    |||||||||||||||| || ||||||| |  ||| ||||||||  ||||||||||| ||| |||||| ||||||||||||| |||||||    |||||||    
T  11140074 taattaggatttaatagaa-ttaagggggagtaaatgaaataa--ggggagttatattttgaggagttaggaaaagaaaagagtcagaactgcttttacg 11140170  T
Q  109 tgaaa-caagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||| |||| |||||||||||||| ||||||||||||    
T  11140171 tgaaaacaagctttgggagagaaaaccaagaacaaggg 11140208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 20805379 - 20805322
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  20805379 aattaaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaatt 20805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 41112282 - 41112225
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  41112282 taattagaatttaataaaaattaagggagtttaatgtaat--agggggagttatagtttt 41112225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 24476395 - 24476350
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  24476395 ttttgttcatc-aaattaaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 10811780 - 10811837
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||| ||||||||||||||||||||||||||||| ||| | || ||||||||||||||    
T  10811780 aattcaggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaatt 10811837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 20837181 - 20837226
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaaggg 56  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  20837181 taattaggatttaataagaattaagggagtttaatgaaatataggg 20837226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 52984289 - 52984240
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  52984289 tttgttcatctaaattaaggtaatggtgaggctaactctcaataatcata 52984240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 18713019 - 18712909
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca-gttttacgtgaaacaagttttgggagagaa-aa 132  Q
    ||||||||||||||||||||||| ||||| |||||| | ||| | |||||  | | |||||||  | |||||||||||||||||||||||||||||| ||    
T  18713019 gggagtttaatgaaataaagggg-agtta-agttttggaagttaagaaaaagagaagtcagaaaaacgttttacgtgaaacaagttttgggagagaagaa 18712922  T
Q  133 tcaagaacaaggg 145  Q
     ||||||||||||    
T  18712921 ccaagaacaaggg 18712909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 20851133 - 20851189
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  20851133 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 20851189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 20857760 - 20857816
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  20857760 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 20857816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 21706330 - 21706274
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  21706330 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 21706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 21710872 - 21710816
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  21710872 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 21710816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 25091404 - 25091448
Alignment:
Q  188 ttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  25091404 ttgttcgtctgaattaaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 19777713 - 19777756
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  19777713 ttttacgtgaaactagttttgggagagaaaaccaagaacaaggg 19777756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 21409666 - 21409766
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt-gaaacaagttttgggagagaaaatcaagaaca 141  Q
    ||||||||||||||| ||||||| |||  ||||| ||||||||| ||| ||||||||||||||||||  | ||||||||||||||| |||| ||||| ||    
T  21409666 aatgaaataaagggg-agttatattttggggagttaggaaaagagaag-tcagaagcagttttacgtacagacaagttttgggaga-aaaaccaagagca 21409762  T
Q  142 aggg 145  Q
    ||||    
T  21409763 aggg 21409766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 23634576 - 23634535
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  23634576 gatttttgtgcatttgttcatctaaattaaggtaagggtgag 23634535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 31926296 - 31926373
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcag-aagcagttttacgtgaaa 113  Q
    ||||||| ||||||||||| |||||||||| || || ||||| |||||||||||  ||||| ||||||||||||||||||    
T  31926296 gggagttaaatgaaataaa-ggggagttat-gtattgggagttaggaaaagaaacagtcagaaagcagttttacgtgaaa 31926373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 5381765 - 5381712
Alignment:
Q  91 gtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||| ||||||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  5381765 gtcataagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaaggg 5381712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  203 aaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  203 aaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 18824670 - 18824633
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  18824670 aattaaggtaagggtgaggctaactctcaataatcata 18824633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 20058551 - 20058522
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgag 216  Q
    ||||||||||||||||||||||||||||||    
T  20058551 tttgttcatctaaattaaggtaagggtgag 20058522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 35064604 - 35064575
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgag 216  Q
    ||||||||||||||||||||||||||||||    
T  35064604 tttgttcatctaaattaaggtaagggtgag 35064575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 11 - 256
Target Start/End: Complemental strand, 18214014 - 18213769
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18214014 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 18213915  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18213914 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaactagtggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaag 18213815  T
Q  211 ggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||| ||| |  ||||| || ||||| ||| |||||||||||||    
T  18213814 ggtgaggctaaccttcaatgattataatatatgatttctgaaaatt 18213769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 2757575 - 2757449
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  2757575 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtg 2757476  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  2757475 aaacaagttttgggagagaaaaccaag 2757449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 56582283 - 56582383
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56582283 taattaggatttaataaaaattaagggagtttaatgaaataaagggggtgttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 56582382  T
Q  111 a 111  Q
    |    
T  56582383 a 56582383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 16158033 - 16157884
Alignment:
Q  11 taattaggatttaataaaaattaaggga-gtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    ||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  16158033 taattagaatttaatagaa-ttaagggaagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaatgtcagaagcagttttacgt 16157935  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaa-gggtgggaagaacaagt 159  Q
    ||||||||||||||||||||||| ||||||||| ||| | |||||||||||    
T  16157934 gaaacaagttttgggagagaaaaccaagaacaatgggagagaagaacaagt 16157884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 8045833 - 8045933
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8045833 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggttt 8045931  T
Q  302 ga 303  Q
    ||    
T  8045932 ga 8045933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 15535336 - 15535235
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatc 134  Q
    ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  15535336 gggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaacc 15535238  T
Q  135 aag 137  Q
    |||    
T  15535237 aag 15535235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 49546758 - 49546883
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||| || |||||||||||||||||    
T  49546758 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaatgttagaagcagttttacgtg 49546856  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  49546857 aaacaagttttgggagagaaaaccaag 49546883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 43283885 - 43283998
Alignment:
Q  33 aagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaa-ggtcagaagcagttttacgtgaaacaagttttgg-gagagaa 130  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||| ||||||||||||| ||| |||    
T  43283885 aagggagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaagggtcagaatcagttttacgtaaaacaagttttggagag-gaa 43283983  T
Q  131 aatcaagaacaaggg 145  Q
    || ||||||||||||    
T  43283984 aaacaagaacaaggg 43283998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 11848168 - 11848058
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttg------gaaaataaattgagggtta 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||       ||||| ||||||||||||    
T  11848168 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggtta 11848069  T
Q  296 gggtttgatga 306  Q
    |||||||||||    
T  11848068 gggtttgatga 11848058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 53483759 - 53483681
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaa 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||| |||||    
T  53483759 taaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttttgaaaa 53483681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 13888708 - 13888643
Alignment:
Q  191 ttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  13888708 ttcatctaaattaaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaatt 13888643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 15408194 - 15408140
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  15408194 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 15408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 8834978 - 8834897
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||| ||||||  |||||||| | |||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  8834978 gatttttgtgcaattgttcatttgaattaaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaatt 8834897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 15245282 - 15245217
Alignment:
Q  191 ttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||||    
T  15245282 ttcatctaaattaaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaatt 15245217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 15308187 - 15308122
Alignment:
Q  191 ttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||| |||||||||| ||| |||||||| ||| |||| |||||||||||||||||    
T  15308187 ttcatctaaattaagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaatt 15308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 13511328 - 13511372
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagg 55  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  13511328 taattaggatttaataaaaattaagggagtttaatgaaattaagg 13511372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 14063836 - 14063793
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  14063836 ttttacgtgaaacaagttttgggagagaaaaccaagaacaaggg 14063793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 14486718 - 14486659
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||| |||||||||||||||||||  ||||| |||||||| |||||||||||||||||||    
T  14486718 aattcaggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaa 14486659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 15069826 - 15069781
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  15069826 ttttgttcatc-aaattaaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 15076426 - 15076381
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  15076426 ttttgttcatc-aaattaaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 15857712 - 15857654
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttt 69  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||    
T  15857712 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagttt 15857654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 11848364 - 11848323
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataa 52  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  11848364 taattagaatttaataaaaattaagggagtttaatgaaataa 11848323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 15747542 - 15747592
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcataa 237  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  15747542 tttgttcatcaaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 16228231 - 16228281
Alignment:
Q  166 agagaatccgattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    ||||||||||||| |||||| ||||||||||| | ||||||||||||||||    
T  16228231 agagaatccgattgttgtgcatttgttcatctgatttaaggtaagggtgag 16228281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 17143304 - 17143255
Alignment:
Q  188 ttgttcatctaaattaaggtaagggtgagactatctctcaataatcataa 237  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||| ||||    
T  17143304 ttgttcgtctgaattaaggtaagggtgagactaactctcaataattataa 17143255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 22724691 - 22724740
Alignment:
Q  207 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaatt 22724740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 16146831 - 16146887
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||||    
T  16146831 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaa 16146887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 27906320 - 27906264
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||| |||||||| || ||||| ||||| |||||||| |||||||||||||||||||    
T  27906320 taagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaa 27906264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 14822544 - 14822471
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    |||||||| ||||||||||||||||||||| ||| || ||||| ||||||||| |||| ||||| | |||||||||    
T  14822544 agggagttaaatgaaataaagggggagtta-agtgttgggagttaggaaaagagaagg-cagaaactgttttacgt 14822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 15318985 - 15318943
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaat 229  Q
    ||||||||||| |||| |||||||||||||||||||||||||||    
T  15318985 ttttgttcatc-aaatcaaggtaagggtgagactatctctcaat 15318943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 30240217 - 30240140
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcag-aagcagttttacgtgaaa 113  Q
    ||||||| ||||||||||| |||||||||| || || ||||| |||||||||||  ||||| ||||||||||||||||||    
T  30240217 gggagttaaatgaaataaa-ggggagttat-gtattgggagttaggaaaagaaacagtcagaaagcagttttacgtgaaa 30240140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 16485717 - 16485671
Alignment:
Q  169 gaatccgattattgtgcttttgttcatctaaattaaggtaagggtga 215  Q
    ||||||||||  ||||| ||||||||||| |||||||||||||||||    
T  16485717 gaatccgatttctgtgcatttgttcatctgaattaaggtaagggtga 16485671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 53904310 - 53904394
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaa 97  Q
    ||||||||| |||||| || | | ||||||||||||||||||| ||||||||||| |||| ||||| | |||||||||  |||||||    
T  53904310 taattaggaattaatagaattaaggggagtttaatgaaataaa-ggggagttatatttttgggagtta-gaaaagaaatagtcagaa 53904394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 3338418 - 3338381
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  3338418 aattaaggtaagggtgaggctaactctcaataatcata 3338381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 10705784 - 10705747
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  10705784 aattaaggtaagggtaagactaactctcaataatcata 10705747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 10919554 - 10919517
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  10919554 aattaaggtaagggtaagactaactctcaataatcata 10919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 14931124 - 14931161
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  14931124 aattaaggtaagggtgaggctaactctcaataatcata 14931161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 15359822 - 15359924
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaag-gtcagaagcagttttacgtgaaac-aagttttgggagagaaaatcaagaac 140  Q
    ||||||||||  ||||||||||| ||  |||||| ||||||||||||  |||||||    ||||||||||||| ||| |||||||||||||| || ||||    
T  15359822 aatgaaataa--ggggagttatatttcgaggagttaggaaaagaaaatagtcagaactgcttttacgtgaaaccaagctttgggagagaaaaccaggaac 15359919  T
Q  141 aaggg 145  Q
    |||||    
T  15359920 aaggg 15359924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 10783409 - 10783445
Alignment:
Q  180 ttgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  10783409 ttgtgcatttgttcatctgaattaaggtaagggtgag 10783445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 10972060 - 10972096
Alignment:
Q  180 ttgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  10972060 ttgtgcatttgttcatctgaattaaggtaagggtgag 10972096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 8579 - 8824
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8579 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 8678  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8679 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatctgattgttgtgcttttgttcatctaaattaaggtaag 8778  T
Q  211 ggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||| ||| |  ||||| || ||||| |||  ||||||||||||    
T  8779 ggtgaggctaaccttcaatgattataatatatggtttctgaaaatt 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 6483964 - 6483666
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  6483964 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 6483866  T
Q  111 aaacaagttttgggagagaaaatc-aagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||||||| | ||| ||||||| | ||||| ||||| ||| || | ||||| |||| |||||||||||||||||||||||||||||    
T  6483865 aaacaagttttgggagagaaaaaccaaggacaagggagagaagagcaagtagagccaagggaatcggattgttgtgcttttgttcatctaaattaaggta 6483766  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483765 agggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 6483666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 6487431 - 6487133
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  6487431 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 6487333  T
Q  111 aaacaagttttgggagagaaaatc-aagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||||||| | ||| ||||||| | ||||| ||||| ||| || | ||||| |||| |||||||||||||||||||||||||||||    
T  6487332 aaacaagttttgggagagaaaaaccaaggacaagggagagaagagcaagtagagccaagggaatcggattgttgtgcttttgttcatctaaattaaggta 6487233  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487232 agggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 6487133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 256
Target Start/End: Complemental strand, 9243209 - 9242962
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaagg--tcagaagcagttttacg 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  9243209 taattaggatttaataaaaattaagggagtttaatgaaataacgggggagttatagttttaggagtgaggaaaagaaaaggggtcagaagcagttttacg 9243110  T
Q  109 tgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  9243109 tgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagggaatccgattgttgtgcttttgttcatctaaattaaggta 9243010  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||| ||| |  ||||| || ||||| |||  ||||||||||||    
T  9243009 agggtgaggctaaccttcaatgattataatatatggtttctgaaaatt 9242962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 195 - 308
Target Start/End: Original strand, 19661447 - 19661560
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggtt 294  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  19661447 tctaaattaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtt 19661546  T
Q  295 agggtttgatgatg 308  Q
    ||||||||||||||    
T  19661547 agggtttgatgatg 19661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 6743112 - 6743245
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  6743112 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 6743210  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  6743211 aaacaagttttgggagagaaaaccaagaacaaggg 6743245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 26583881 - 26583776
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  26583881 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggctt 26583783  T
Q  302 gatgatg 308  Q
    |||||||    
T  26583782 gatgatg 26583776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 43694710 - 43694578
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||| ||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  43694710 taattaggatttaatagaattaaggggagtt-aatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 43694613  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  43694612 aaacaagttttgggagagaaaaccaagaacaaggg 43694578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 20262398 - 20262273
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  20262398 taattaggaattaatataattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 20262300  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  20262299 aaacaagttttgggagagaaaaccaag 20262273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 10683770 - 10683871
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatc 134  Q
    ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  10683770 gggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtgaaacaagttttgggagagaaaacc 10683868  T
Q  135 aag 137  Q
    |||    
T  10683869 aag 10683871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 201936 - 201799
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt- 109  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||| ||||     
T  201936 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatag-tttgggagttaggaaaagaaaaggtcagaagcagtttcacgta 201838  T
Q  110 ---gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
        | |||||||||||||||||||| ||||||||||||    
T  201837 caacagacaagttttgggagagaaaaccaagaacaaggg 201799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 285
Target Start/End: Complemental strand, 23265368 - 23265114
Alignment:
Q  29 aattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca-gttttacgtgaaacaagttttgggaga 127  Q
    ||||||||||||||||||||||||||||| ||||| |||||| | ||| | ||||||| |||| |||||  | |||||||||||||||||||||||||||    
T  23265368 aattaagggagtttaatgaaataaagggg-agtta-agttttggaagttaagaaaagagaagg-cagaaaaacgttttacgtgaaacaagttttgggaga 23265272  T
Q  128 gaa-aatcaagaacaagggtgg-gaagaacaagtggagtcagagaatccgattattgtg-cttttgttcatctaaattaaggtaagggtgagactatctc 224  Q
    ||| || ||||| ||||||  | ||||||||||| ||| || ||||||  |||  |||| | |  | |  ||| ||||||||||||||||||||||||||    
T  23265271 gaagaaccaagagcaaggggagagaagaacaagtagagcca-agaatc--attcgtgtgtcgtgcgattttctgaattaaggtaagggtgagactatctc 23265175  T
Q  225 tcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||| | ||||||||||||||||| | ||||||| || ||| | |||||||||    
T  23265174 tcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaa 23265114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 285
Target Start/End: Complemental strand, 23280436 - 23280182
Alignment:
Q  29 aattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca-gttttacgtgaaacaagttttgggaga 127  Q
    ||||||||||||||||||||||||||||| ||||| |||||| | ||| | ||||||| |||| |||||  | |||||||||||||||||||||||||||    
T  23280436 aattaagggagtttaatgaaataaagggg-agtta-agttttggaagttaagaaaagagaagg-cagaaaaacgttttacgtgaaacaagttttgggaga 23280340  T
Q  128 gaa-aatcaagaacaagggtgg-gaagaacaagtggagtcagagaatccgattattgtg-cttttgttcatctaaattaaggtaagggtgagactatctc 224  Q
    ||| || ||||| ||||||  | ||||||||||| ||| || ||||||  |||  |||| | |  | |  ||| ||||||||||||||||||||||||||    
T  23280339 gaagaaccaagagcaaggggagagaagaacaagtagagcca-agaatc--attcgtgtgtcgtgcgattttctgaattaaggtaagggtgagactatctc 23280243  T
Q  225 tcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||| | ||||||||||||||||| | ||||||| || ||| | |||||||||    
T  23280242 tcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaa 23280182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 23101260 - 23101337
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| || ||||||||    
T  23101260 taattaggatttaataaaaattaagggagtttaatgaaatagggggggagttatagttttgggagttagaaaaagaaa 23101337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 21908512 - 21908360
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaa-aatcaagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaa 199  Q
    |||||||||||||||||||||||||| || || ||||||| |||| | ||||||||||| ||| || ||   |||||||   |||||||| |    || |    
T  21908512 ttttacgtgaaacaagttttgggagaaaagaaccaagaactagggagagaagaacaagtagagccaagatcgtccgattgccgtgctttttt----ctga 21908417  T
Q  200 attaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  21908416 attaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 21908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 5706024 - 5706130
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaat-tgagggttagggtt 300  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||||||| |||||||| |||||  ||| |||   ||||||||    
T  5706024 taaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtt 5706122  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  5706123 tgatgatg 5706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 26584077 - 26584036
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataa 52  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26584077 taattaggatttaataaaaattaagggagtttaatgaaataa 26584036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 6259976 - 6260016
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6259976 taattaggatttaataaaaattaagggagtttaatgaaata 6260016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 17635081 - 17634971
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaaca-agttttgggagagaaaa 132  Q
    |||||||| | ||||||||||||||||||| ||| || ||||| ||||||||| || ||||||| | |||||||||  |||| |||||||||||| ||||    
T  17635081 agggagttaagtgaaataaagggggagtta-agtgttgggagttaggaaaagagaaagtcagaaactgttttacgtacaacagagttttgggaga-aaaa 17634984  T
Q  133 tcaagaacaaggg 145  Q
     ||||||||||||    
T  17634983 ccaagaacaaggg 17634971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 24944460 - 24944416
Alignment:
Q  101 gttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  24944460 gttttacgtgaaacaagttttgggagagaaaaccaagaacaaggg 24944416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 20649262 - 20649163
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg-aaacaagttttgggagagaaaatcaagaaca 141  Q
    ||||||||||||||| ||||||| |||  ||||| ||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||| ||||| ||    
T  20649262 aatgaaataaagggg-agttata-tttggggagttaggaaaagagaag-tcagaagcagttttacgtgaaaacaagttttgggaga-aaaaccaagagca 20649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 17965390 - 17965448
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttt 69  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||    
T  17965390 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagttt 17965448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 23089052 - 23089162
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagg 297  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||| |||||||||| ||   |||   |  |||||||||||||||    
T  23089052 aattcaggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagg 23089151  T
Q  298 gtttgatgatg 308  Q
    |||||||||||    
T  23089152 gtttgatgatg 23089162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 23101460 - 23101570
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagg 297  Q
    ||||||||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||| |||||||||  ||   |||   |  |||||||||||||||    
T  23101460 aattaaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagg 23101559  T
Q  298 gtttgatgatg 308  Q
    |||||||||||    
T  23101560 gtttgatgatg 23101570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 26885236 - 26885139
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagtt-ttggaaaataaattgagggttagggt 299  Q
    ||||||||||||| || ||||| ||||||||| |||| ||||||||||||||||||| ||||| | |||||| ||||| || ||||||||  |||||||    
T  26885236 taaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattagggt 26885139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 24661635 - 24661578
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||    
T  24661635 aattaaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaatt 24661578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 10631 - 10575
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  10631 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 10575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 23879060 - 23878964
Alignment:
Q  204 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtt 300  Q
    |||||||||||||||||||||||| |||| || || |||||||||  |||||| |||||||||| ||   |||   | |||||||||||||||||||    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggtt 23878964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 25180930 - 25180986
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  25180930 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 25180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 2945303 - 2945242
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaa 97  Q
    ||||||||||||||||||||| ||||||||| |||| ||||| |||| |||||||||| ||||    
T  2945303 gggagtttaatgaaataaaggaggagttata-ttttgggagttaggataagaaaaggttagaa 2945242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 19664877 - 19664919
Alignment:
Q  11 taattaggatttaataaaa-attaagggagtttaatgaaataa 52  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  19664877 taattaggatttaataaaaaattaagggagtttaatgaaataa 19664919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 20317074 - 20317023
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagtt 62  Q
    |||||||||||||||| || | | ||||||||||||||||||| ||||||||    
T  20317074 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagtt 20317023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 23168299 - 23168374
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagttttg 276  Q
    ||||||||||||| || ||||| ||| | |||||||| ||||||||||| |||||||| ||||| | |||||||||    
T  23168299 taaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagttttg 23168374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 23579556 - 23579631
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagttttg 276  Q
    ||||||||||||| || ||||| ||| | |||||||| ||||||||||| |||||||| ||||| | |||||||||    
T  23579556 taaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagttttg 23579631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 27207720 - 27207781
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaa 263  Q
    ||||||||||||| || ||||| ||||| ||  |||| ||||||||||||||||||| ||||    
T  27207720 taaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatctaa 27207781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 187; Significance: 1e-101; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 34687 - 34481
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaagg-tcagaagcagttttacgt 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34687 taattaggatttaataaaaattaagcgagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaagggtcagaagcagttttacgt 34588  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34587 gaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattgttgtgcttttgttaatctaaattaaggtaa 34488  T
Q  210 gggtgag 216  Q
    |||||||    
T  34487 gggtgag 34481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 13801 - 13694
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| ||||||||||||||  ||||| ||| || ||||| ||||||||| || |||||||||||||| |||| ||||||||||||||||| ||||     
T  13801 agggagttaaatgaaataaaggg--agtta-agtattgggagttaggaaaagagaaagtcagaagcagtttcacgtaaaacaagttttgggaga-aaaac 13706  T
Q  134 caagaacaaggg 145  Q
    ||||||||||||    
T  13705 caagaacaaggg 13694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 135528 - 135474
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  135528 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 135474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 18614498 - 18614273
Alignment:
Q  29 aattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagag 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18614498 aattaagggagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagag 18614399  T
Q  129 aaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaa 228  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||| ||  ||| ||||||||||||||||||||||||||||||||||    
T  18614398 aaaaccaagaacaagggtgagaagaacaagtagagtcagagaatccgatcattgtgcgtt--ttcttctaaattaaggtaagggtgagactatctctcaa 18614301  T
Q  229 taatcataatctataatttctgaaaatt 256  Q
    ||||||| || |||||||||||||||||    
T  18614300 taatcatgatatataatttctgaaaatt 18614273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 81 - 285
Target Start/End: Original strand, 23481932 - 23482136
Alignment:
Q  81 aaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  23481932 aaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaactggagtcagagaatccgattgt 23482031  T
Q  181 tgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaa 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||||||| || ||| | ||||    
T  23482032 tgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaa 23482131  T
Q  281 ataaa 285  Q
    |||||    
T  23482132 ataaa 23482136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 44477677 - 44477571
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44477677 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 44477578  T
Q  302 gatgatg 308  Q
    |||||||    
T  44477577 gatgatg 44477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 44492835 - 44492729
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44492835 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 44492736  T
Q  302 gatgatg 308  Q
    |||||||    
T  44492735 gatgatg 44492729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 8727546 - 8727665
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||| |||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  8727546 taattaggatttaataaaaatgaagggagtttaatgaaa--aaggggaagttatagttttgggagttaggaaaagaataggtcagaagcagttttacgtg 8727643  T
Q  111 aaacaagttttgggagagaaaa 132  Q
    ||||||||||||||||||||||    
T  8727644 aaacaagttttgggagagaaaa 8727665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 23826451 - 23826318
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| || ||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  23826451 taattaggatttaatagaattaaggggagtttaatgaaataaaaggagagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 23826353  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  23826352 aaacaagttttgggagagaaaaccaagaacaaggg 23826318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 23866669 - 23866564
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  23866669 taaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggttt 23866571  T
Q  302 gatgatg 308  Q
    |||||||    
T  23866570 gatgatg 23866564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 8727730 - 8727840
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagg 297  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  8727730 aattcaggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagg 8727829  T
Q  298 gtttgatgatg 308  Q
    |||||| ||||    
T  8727830 gtttgacgatg 8727840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 17054644 - 17054540
Alignment:
Q  203 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtttg 302  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||  |||  |||||||||||    
T  17054644 aaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttg 17054546  T
Q  303 atgatg 308  Q
    ||||||    
T  17054545 atgatg 17054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 14056383 - 14056447
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagt 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  14056383 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagtta-agttttgggagt 14056447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 44477873 - 44477773
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || ||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||| | |||| |||||    
T  44477873 taattaggaattaatagaa-ttaagggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaaactgtttaacgtg 44477776  T
Q  111 aaa 113  Q
    |||    
T  44477775 aaa 44477773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 44493031 - 44492931
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || ||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||| | |||| |||||    
T  44493031 taattaggaattaatagaa-ttaagggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaaactgtttaacgtg 44492934  T
Q  111 aaa 113  Q
    |||    
T  44492933 aaa 44492931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 25112196 - 25112144
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagtta 63  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25112196 taattaggatttaataaaaattaagggattttaatgaaataaagggggagtta 25112144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 29643379 - 29643442
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  29643379 tctaaattaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaa 29643442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 256
Target Start/End: Complemental strand, 21931907 - 21931698
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| | ||||||||||||  ||||| ||| || ||||| ||||||||| || |||| ||||||||| |||| ||||||||||||||||| |||||    
T  21931907 agggagttaagtgaaataaaggg--agtta-agtattgggagttaggaaaagagaaagtcaaaagcagtttcacgtaaaacaagttttgggaga-aaaat 21931812  T
Q  134 caagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgt-gcttttgttcatctaaattaaggtaagggtgagactatctctcaataa 231  Q
    ||||||||||||     ||||      ||||| |||||| | |||| |||| |  ||| ||||||| |||||||||||||||||| ||| |||||||| |    
T  21931811 caagaacaaggg-----agaa------gagtcaagagaaccagatttttgtagggttttttcatctgaattaaggtaagggtgaggctaactctcaatga 21931723  T
Q  232 tcataatctataatttctgaaaatt 256  Q
    | ||||| ||||| |||||||||||    
T  21931722 ttataatatataacttctgaaaatt 21931698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 21283153 - 21283096
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagt 159  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||    
T  21283153 ttttacgtgaaacaagttttgggagagaaaaccaagaacaagggggagaagaacaagt 21283096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 39364978 - 39364921
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||    
T  39364978 aattaaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaatt 39364921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 23654546 - 23654436
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg-aaacaagttttgggagagaaaa 132  Q
    |||||||| | ||||||||||||||||||| ||| || ||||| ||||||||| || ||||||| | |||||||||| || |||||||||||||| ||||    
T  23654546 agggagttaagtgaaataaagggggagtta-agtgttgggagttaggaaaagagaaagtcagaaactgttttacgtgcaatcaagttttgggaga-aaaa 23654449  T
Q  133 tcaagaacaaggg 145  Q
     ||||| ||||||    
T  23654448 ccaagagcaaggg 23654436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 33090072 - 33089962
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaac-aagttttgggagagaaaa 132  Q
    |||||||| | ||||||||||||||||||| ||| || ||||| ||||||||| || ||||||| | |||||||||  ||| ||||||||||||| ||||    
T  33090072 agggagttaagtgaaataaagggggagtta-agtgttgggagttaggaaaagagaaagtcagaaactgttttacgtacaacaaagttttgggaga-aaaa 33089975  T
Q  133 tcaagaacaaggg 145  Q
     ||||||||||||    
T  33089974 ccaagaacaaggg 33089962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 21320988 - 21321121
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagtttt-acgt 109  Q
    |||||||||||||||| || | | |||||||||||||| |||||||  ||||| | ||   ||||| | |||||||||| |||||||   ||||| ||||    
T  21320988 taattaggatttaatagaattaaggggagtttaatgaattaaaggga-agttaca-ttaggggagttaagaaaagaaaaagtcagaaaacgtttttacgt 21321085  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||| ||||||||||||||||| ||||||||||||    
T  21321086 gaaaccagttttgggagagaaaaccaagaacaaggg 21321121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 17054838 - 17054781
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagtttt 70  Q
    ||||||| |||||||||||||||||||||||||||| |||  |||||| |||||||||||    
T  17054838 taattagaatttaataaaaattaagggagtttaatgtaat--agggggggttatagtttt 17054781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 24320671 - 24320727
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  24320671 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 24320727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 25623642 - 25623752
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt-gaaacaagttttgggagagaaaa 132  Q
    |||||||| ||||||||||||||||||||| ||| || ||||| |||||||  | | ||||||| | |||||||||  || |||||||||||||| ||||    
T  25623642 agggagttaaatgaaataaagggggagtta-agtgttgggagttaggaaaaagagaagtcagaaactgttttacgtacaatcaagttttgggaga-aaaa 25623739  T
Q  133 tcaagaacaaggg 145  Q
     ||||||||||||    
T  25623740 ccaagaacaaggg 25623752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 27940656 - 27940696
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27940656 taattaggatttaataaaaattaatggagtttaatgaaata 27940696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 14056564 - 14056618
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||| ||| | | ||| |||||||||||    
T  14056564 taaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaatt 14056618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 20773042 - 20773172
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaa-tgaaataaagggggagttatagttttaggagtgaggaaaagaaaag-gtcagaagcagttttacg 108  Q
    ||||||||||||||||||| ||||||| |  ||| ||||||||  ||||||||||| ||| |||||| ||||||||||||| |||||||    ||||| |    
T  20773042 taattaggatttaataaaa-ttaagggggagtaaatgaaataa--ggggagttatattttgaggagttaggaaaagaaaagagtcagaactgcttttatg 20773138  T
Q  109 tgaaa-caagttttgggagagaaaatcaagaaca 141  Q
    ||||| |||| || ||||||||||| ||||||||    
T  20773139 tgaaaccaagcttggggagagaaaaccaagaaca 20773172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 20782836 - 20782966
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaa-tgaaataaagggggagttatagttttaggagtgaggaaaagaaaag-gtcagaagcagttttacg 108  Q
    ||||||||||||||||||| ||||||| |  ||| ||||||||  ||||||||||| ||| |||||| ||||||||||||| |||||||    ||||| |    
T  20782836 taattaggatttaataaaa-ttaagggggagtaaatgaaataa--ggggagttatattttgaggagttaggaaaagaaaagagtcagaactgcttttatg 20782932  T
Q  109 tgaaa-caagttttgggagagaaaatcaagaaca 141  Q
    ||||| |||| || ||||||||||| ||||||||    
T  20782933 tgaaaccaagcttggggagagaaaaccaagaaca 20782966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 25112031 - 25111977
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||| ||| | | ||| |||||||||||    
T  25112031 taaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaatt 25111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 29643208 - 29643298
Alignment:
Q  27 aaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaag-cagttttacgtgaaacaagtt 119  Q
    ||||||||||||||||||||| | ||||||  |||||||||||| ||||| | ||||||||| |  |||||  |||||||||||||||||||||    
T  29643208 aaaattaagggagtttaatgagaaaaaggg--agttatagttttgggagttaagaaaagaaa-gaccagaaaacagttttacgtgaaacaagtt 29643298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 38184685 - 38184731
Alignment:
Q  191 ttcatctaaattaaggtaagggtgagactatctctcaataatcataa 237  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  38184685 ttcatctgaattaaggtaagggtgagactaactctcaataattataa 38184731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 20972991 - 20973032
Alignment:
Q  15 taggatttaataaaaattaagggagtttaatgaaataaaggg 56  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  20972991 taggatttaataagaattaagggagtttaatgaaatataggg 20973032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 21325585 - 21325716
Alignment:
Q  11 taattaggatttaataaaaattaaggg-agtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagtttt-acg 108  Q
    |||||||||||||||  || ||||||| ||||||||||| |||||||  ||||| | ||   ||||| | |||||||||| |||||||   ||||| |||    
T  21325585 taattaggatttaatggaatttaaggggagtttaatgaattaaaggga-agttaca-ttaggggagttaagaaaagaaaaagtcagaaaacgtttttacg 21325682  T
Q  109 tgaaacaagttttgggagagaaaatcaagaacaa 142  Q
    |||||| ||||||||||||||||| |||||||||    
T  21325683 tgaaaccagttttgggagagaaaaccaagaacaa 21325716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 21682805 - 21682852
Alignment:
Q  169 gaatccgattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||||| ||| |||||| |||||||||| |||||||||||||||||||    
T  21682805 gaatcctattgttgtgcatttgttcatccaaattaaggtaagggtgag 21682852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 14593855 - 14593901
Alignment:
Q  169 gaatccgattattgtgcttttgttcatctaaattaaggtaagggtga 215  Q
    |||||| ||| |||||| |||||||||| ||||||||||||||||||    
T  14593855 gaatcctattgttgtgcatttgttcatcgaaattaaggtaagggtga 14593901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 17272625 - 17272671
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||||| |||||| |||  ||||||||||||||    
T  17272625 gttcatctaaattaaggtaaaggtgaggctaaatctcaataatcata 17272671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 19750619 - 19750549
Alignment:
Q  188 ttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||||||||| |||||||||||||||||| ||| |  ||||| |  ||||| ||| |||||||||||||||    
T  19750619 ttgttcatctgaattaaggtaagggtgaggctaaccttcaatgactataatatatgatttctgaaaattaa 19750549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 20458056 - 20458026
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagacta 220  Q
    |||||||||||||||||||||||||||||||    
T  20458056 gttcatctaaattaaggtaagggtgagacta 20458026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 22919955 - 22920005
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||| | |||| ||||||||||| ||| |||||||||||||||    
T  22919955 ttttgttcatctgatttaaagtaagggtgaggctaactctcaataatcata 22920005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 21685193 - 21685234
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||| |||||| ||||||||||| ||||||||||||||||||    
T  21685193 gattgttgtgcatttgttcatctgaattaaggtaagggtgag 21685234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 21689542 - 21689583
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||| |||||| ||||||||||| ||||||||||||||||||    
T  21689542 gattgttgtgcatttgttcatctgaattaaggtaagggtgag 21689583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 32950954 - 32950917
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  32950954 aattaaggtaagggtgaggctaactctcaataatcata 32950917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 20463257 - 20463229
Alignment:
Q  192 tcatctaaattaaggtaagggtgagacta 220  Q
    |||||||||||||||||||||||||||||    
T  20463257 tcatctaaattaaggtaagggtgagacta 20463229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 9534573 - 9534276
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  9534573 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 9534475  T
Q  111 aaacaagttttgggagagaaaatc-aagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||| ||||| | ||| ||||||| | ||||| ||||| ||| || | |||||||||  |||||| ||| ||| ||| ||||||||||    
T  9534474 aaacaagttttgggagggaaaaaccaaggacaagggagagaagagcaagtagagccaagggaatccgatcgttgtgcattt-ttcttctgaattaaggta 9534376  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534375 agggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgatgatg 9534276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 16801273 - 16801147
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  16801273 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtg 16801174  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  16801173 aaacaagttttgggagagaaaaccaag 16801147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 38310609 - 38310736
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaa-ggtcagaagcagttttacgt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38310609 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaagggtcagaagcagttttacgt 38310708  T
Q  110 gaaacaagttttgggagagaaaatcaag 137  Q
    ||||||| ||||||||||||||| ||||    
T  38310709 gaaacaaattttgggagagaaaaccaag 38310736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 308
Target Start/End: Original strand, 14762751 - 14762864
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggtt 294  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  14762751 tctaaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtt 14762850  T
Q  295 agggtttgatgatg 308  Q
    ||||||||||||||    
T  14762851 agggtttgatgatg 14762864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 17240324 - 17240596
Alignment:
Q  11 taattaggatttaataaaaattaaggga-gtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    ||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||||||||||||||    
T  17240324 taattaggagttaatagaa-ttaagggaagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaatgtaagaagcagttttacgt 17240422  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaa-gggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggt 207  Q
    ||||||||||||||||||||||| ||||||||| ||| | ||||||||||| ||| | | |  | |||  | | ||||    | |  ||| |||||||||    
T  17240423 gaaacaagttttgggagagaaaaccaagaacaaggggagagaagaacaagtagagccaatatcaaccgtgtgtcgtgc----gattttctgaattaaggt 17240518  T
Q  208 aagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||| | ||||||| || ||| | |||||||||    
T  17240519 aagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaa 17240596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 20247786 - 20247895
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttaggg 298  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  20247786 aattcaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttaggg 20247885  T
Q  299 tttgatgatg 308  Q
    ||||||||||    
T  20247886 tttgatgatg 20247895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 20247601 - 20247725
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||  ||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  20247601 taattaggatttaataaaaattaagggagtttaatgaaa--aagaggaagttatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtg 20247698  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  20247699 aaacaagttttgggagagaaaaccaag 20247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 14085842 - 14085709
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  14085842 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 14085744  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  14085743 aaacaagttttgggagagaaaaccaagaacaaggg 14085709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 24193201 - 24193082
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  24193201 taattaggatttaataaaaattaagggagtttaatgaaaaaa--ggggagttatagttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 24193104  T
Q  111 aaacaagttttgggagagaaaa 132  Q
    ||||||||||||||||||||||    
T  24193103 aaacaagttttgggagagaaaa 24193082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 49400842 - 49400709
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  49400842 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 49400744  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  49400743 aaacaagttttgggagagaaaaccaagaacaaggg 49400709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 14091243 - 14091110
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||    
T  14091243 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagtagttttacgtg 14091145  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  14091144 aaacaagttttgggagagaaaaccaagaacaaggg 14091110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 204 - 308
Target Start/End: Complemental strand, 24193009 - 24192904
Alignment:
Q  204 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtttg 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  303 atgatg 308  Q
    ||||||    
T  24192909 atgatg 24192904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 38310797 - 38310906
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttaggg 298  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  38310797 aattcaggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttaggg 38310896  T
Q  299 tttgatgatg 308  Q
    ||||||||||    
T  38310897 tttgatgatg 38310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 11849415 - 11849527
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||     
T  11849415 taattaggatttaataataattaaaggagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaaggtcagaagcagttgtacgta 11849514  T
Q  111 aaacaagttttgg 123  Q
    |||||||||||||    
T  11849515 aaacaagttttgg 11849527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 13666905 - 13667017
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||     
T  13666905 taattaggatttaataataattaaaggagtttaatgaaataaagagggagttatagttttgggagttaggaaaagaaaaggtcagaagcagttgtacgta 13667004  T
Q  111 aaacaagttttgg 123  Q
    |||||||||||||    
T  13667005 aaacaagttttgg 13667017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 8579056 - 8579186
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| | ||||||||||||||||||||||||||||||     
T  8579056 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaagaaaagaaaaggtcagaagcagttttacgtc 8579154  T
Q  111 aaacaagttttgggagagaaaatcaagaacaa 142  Q
    |||||||||||||||||||||| |||||||||    
T  8579155 aaacaagttttgggagagaaaaccaagaacaa 8579186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 23370506 - 23370613
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtt 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||    
T  23370506 taaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 23370605  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  23370606 tgatgatg 23370613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 54522001 - 54521876
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  54522001 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 54521903  T
Q  111 aaacaagttttgggagagaaaatcaag 137  Q
    |||||||||||||||||||||| ||||    
T  54521902 aaacaagttttgggagagaaaaccaag 54521876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 24933829 - 24933934
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||   |||||||||    
T  24933829 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 24933927  T
Q  302 gatgatg 308  Q
    |||||||    
T  24933928 gatgatg 24933934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 41455098 - 41455178
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaata 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  41455098 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 55498900 - 55498976
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| || ||||||||    
T  55498900 taattaggatttaataaaaattaagggagtttaatgaaat-aggggggagttatagttttgggagttagaaaaagaaa 55498976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 16801468 - 16801566
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaat-aaattgagggttagggtt 300  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| ||||| ||| ||| ||| || ||||||| ||||||||||    
T  16801468 taaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggttagggtt 16801566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 18929303 - 18929246
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  18929303 aattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 18929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 12203490 - 12203357
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaa-tgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    |||||||||||||||| || ||||||| |  ||| ||||||||  ||||||||||| ||| |||||| |||||||||||  |||||||    ||||||||    
T  12203490 taattaggatttaatagaa-ttaagggggagtaaatgaaataa--ggggagttatattttgaggagttaggaaaagaaatagtcagaactgcttttacgt 12203394  T
Q  110 gaaac-aagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||| ||| |||||||||||||| ||||||||||||    
T  12203393 gaaaccaagctttgggagagaaaaccaagaacaaggg 12203357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 13302241 - 13302297
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  13302241 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaa 13302297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 13323788 - 13323844
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  13323788 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaa 13323844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 23370297 - 23370337
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23370297 taattaggatttaataaaaattaagggagtttaatgaaata 23370337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 41454905 - 41454961
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttt 69  Q
    ||||||| |||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  41454905 taattagaatttaataaaaattaagggagtttaatgtaat--agggggagttatagttt 41454961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 10389444 - 10389550
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| ||| ||||||| ||||||||  | |||||  |||   |||||||||    
T  10389444 taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggttt 10389543  T
Q  302 gatgatg 308  Q
    |||||||    
T  10389544 gatgatg 10389550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 10414533 - 10414639
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| ||| ||||||| ||||||||  | |||||  |||   |||||||||    
T  10414533 taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggttt 10414632  T
Q  302 gatgatg 308  Q
    |||||||    
T  10414633 gatgatg 10414639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 10421203 - 10421309
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| ||| ||||||| ||||||||  | |||||  |||   |||||||||    
T  10421203 taaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggttt 10421302  T
Q  302 gatgatg 308  Q
    |||||||    
T  10421303 gatgatg 10421309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 31689679 - 31689736
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagt 159  Q
    |||||||||||| |||||||||||||||||| |||||||||||| | ||||| |||||    
T  31689679 ttttacgtgaaataagttttgggagagaaaaccaagaacaagggagagaagagcaagt 31689736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 31944547 - 31944490
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagt 159  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| | ||||| |||||    
T  31944547 ttttaggtgaaacaagttttgggagagaaaaccaagaacaagggagagaagagcaagt 31944490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 12033445 - 12033501
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  12033445 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 12033501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 13312897 - 13312953
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||||    
T  13312897 taaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaattaa 13312953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 17131786 - 17131730
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  17131786 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 17131730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 51301643 - 51301587
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||||||||||||||| |||||  ||||||||||||| | |||||||||||||||||    
T  51301643 taaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaa 51301587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 3803877 - 3803836
Alignment:
Q  188 ttgttcatctaaattaaggtaagggtgagactatctctcaat 229  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  3803877 ttgttcgtctgaattaaggtaagggtgagactatctctcaat 3803836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 42110370 - 42110275
Alignment:
Q  45 tgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaaca-agttttgggagagaaaatcaagaaca 141  Q
    ||||||||||||||||||| ||| || ||||| ||||||||| || ||||||| | |||||||||  |||| |||||||||||| |||| ||||||||    
T  42110370 tgaaataaagggggagtta-agtgttgggagttaggaaaagagaaagtcagaaactgttttacgtacaacagagttttgggaga-aaaaccaagaaca 42110275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 43929458 - 43929413
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||    
T  43929458 tttgttcatctaaattaaggtaagggtgaggctaactttcaataat 43929413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 14865900 - 14865844
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||||    
T  14865900 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaa 14865844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 14288082 - 14288132
Alignment:
Q  94 agaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  14288082 agaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaaggg 14288132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 6804880 - 6804910
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagacta 220  Q
    |||||||||||||||||||||||||||||||    
T  6804880 gttcatctaaattaaggtaagggtgagacta 6804910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 12306115 - 12306085
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaat 229  Q
    |||||||||||||||||||||||||||||||    
T  12306115 aattaaggtaagggtgagactatctctcaat 12306085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 18929398 - 18929336
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaa-aatcaagaacaagggtgggaagaacaagtggag 163  Q
    |||||||||||||||||||||||||| || || ||||||| |||| | ||||||||||| |||    
T  18929398 ttttacgtgaaacaagttttgggagaaaagaaccaagaactagggagagaagaacaagtagag 18929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 23392820 - 23392854
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcata 236  Q
    ||||||||||||||||||| |||||||||||||||    
T  23392820 taaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 35985820 - 35985767
Alignment:
Q  91 gtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||| |||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  35985820 gtcagaaacagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaaggg 35985767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 10833294 - 10833359
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 252  Q
    |||||||||| ||| ||||||||||||||||||| |  ||| |||||||| | ||||| |||||||    
T  10833294 tttgttcatcaaaactaaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaa 10833359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 16801086 - 16801029
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||| ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||    
T  16801086 aattcaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 16801029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 52337953 - 52337990
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  52337953 aattaaggtaagggtgaggctaactctcaataatcata 52337990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 18127628 - 18127672
Alignment:
Q  102 ttttacgtgaaac-aagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  18127628 ttttacgtgaaaccaagctttgggagaaaaaatcaagaacaaggg 18127672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 171; Significance: 8e-92; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 8320 - 8049
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  8320 taattaggatttaataaaaattaagggagtttaatgaaa--aagggggagttatagttttgggagttaggaaaagaaaaggtcagaagcagttttacgtg 8223  T
Q  111 aaacaagttttgggagagaaaatcaagaacaa--gggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||||||| |||||||||  ||| | ||||||||||| ||||||||||||||| |  |||||| ||| |||    ||| |||||||    
T  8222 aaacaagttttgggagagaaaaccaagaacaagggggagagaagaacaagtagagtcagagaatccggtcgttgtgcgtttcttc--taaaactaaggta 8125  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataa 284  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| ||||    
T  8124 agggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 1175 - 904
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||    
T  1175 taattaggatttaataaaaattaagggagtttaatgaaa--aagggggagttatagttttgggagttaggaaaagaaaaggttagaagtagttttacgtg 1078  T
Q  111 aaacaagttttgggagagaaaatcaagaacaa--gggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||||||| |||||||||  ||| | |||||||||||  |||||||||||||| |  |||||| ||| |||    ||| |||||||    
T  1077 aaacaagttttgggagagaaaaccaagaacaagggggagagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttc--taaaactaaggta 980  T
Q  209 agggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataa 284  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| ||||    
T  979 agggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 157; Significance: 2e-83; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 35 - 285
Target Start/End: Complemental strand, 117117 - 116868
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg-aaacaagttttgggagagaaaat 133  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  117117 gggagtttaatgaaataaagggggagttatagttttgagagttaggaaaagaaaaggtcagaagcagttttacgtgaaaacaagttttgggagagaaaac 117018  T
Q  134 caagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatc 233  Q
    |||||||||||||| ||| |||||||||||||||||||||||||  |||||  | | ||| |||||||||||||||||||||||||||||||||||||||    
T  117017 caagaacaagggtgagaaaaacaagtggagtcagagaatccgatcgttgtg--tgttttcttctaaattaaggtaagggtgagactatctctcaataatc 116920  T
Q  234 ataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    ||| | ||||||||||||||||| | ||||||| || ||| | |||||||||    
T  116919 atagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaa 116868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  203 aaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 385221 - 385182
Alignment:
Q  189 tgttcatctaaattaaggtaagggtgagactatctctcaat 229  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  385221 tgttcatc-aaatcaaggtaagggtgagactatctctcaat 385182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 103; Significance: 3e-51; HSPs: 8)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 111740 - 111634
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  111740 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 111641  T
Q  302 gatgatg 308  Q
    |||||||    
T  111640 gatgatg 111634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 11851 - 11957
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  11851 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggttt 11950  T
Q  302 gatgatg 308  Q
    |||||||    
T  11951 gatgatg 11957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 121234 - 121367
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca-gttttacgt 109  Q
    |||||||||||||||| || | | ||||||||||||||||| ||||  ||||| | |||  ||||| | |||||||||  ||||||   | |||||||||    
T  121234 taattaggatttaatagaattaaggggagtttaatgaaatataggga-agttaca-tttggggagttaagaaaagaaagagtcagagaaacgttttacgt 121331  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||||||||||||| ||||||||||||    
T  121332 gaaacaagttttgggagagaaaaccaagaacaaggg 121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 11654 - 11708
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagt 67  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  11654 taattaggatttaataaaaattaagggagtttaatgaaat--aggggaagttatagt 11708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 143854 - 143747
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| ||||||||||||||| ||||| ||| || ||||| ||||||||  ||| ||||||||||||| || | ||||||||||||||||| ||||     
T  143854 agggagttaaatgaaataaagggg-agtta-agtattgggagttaggaaaagggaag-tcagaagcagtttcacataaaacaagttttgggaga-aaaac 143759  T
Q  134 caagaacaaggg 145  Q
    ||||||||||||    
T  143758 caagaacaaggg 143747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 67346 - 67303
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||    
T  67346 ttttacgtgaaacaagttttgggggagaaaaccaagaacaaggg 67303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 10164 - 10134
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagacta 220  Q
    |||||||||||||||||||||||||||||||    
T  10164 gttcatctaaattaaggtaagggtgagacta 10134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 22240 - 22210
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagacta 220  Q
    |||||||||||||||||||||||||||||||    
T  22240 gttcatctaaattaaggtaagggtgagacta 22210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 13876 - 13604
Alignment:
Q  11 taattaggatttaataaaaattaaggga-gtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    ||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||||||||||||||    
T  13876 taattaggagttaatagaa-ttaagggaagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaaatgttagaagcagttttacgt 13778  T
Q  110 gaaacaagttttgggagagaaaatcaagaacaa-gggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggt 207  Q
    ||||||||||||||||||||||| ||||||||| ||| | ||||||||||| ||| | | |  | |||  | | ||||    | |  ||| |||||||||    
T  13777 gaaacaagttttgggagagaaaaccaagaacaaggggagagaagaacaagtagagccaatatcaaccgtgtgtcgtgc----gattttctgaattaaggt 13682  T
Q  208 aagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||| | ||||||| || ||| | |||||||||    
T  13681 aagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaa 13604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 34085 - 34330
Alignment:
Q  11 taattaggatttaataaaa-attaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||    
T  34085 taattaggatttaataaaaaattaagggagtttaatgaaataaaggaggagttatagttttgggagttaggaaaagaaatggttagaagcagttttacgt 34184  T
Q  110 gaaacaagttttgggagagaa-aatcaagaacaa-gggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaagg 206  Q
    |||||||||||||||||| || || ||||||||| ||| | ||||||||||| ||| | |||  | |||  | | ||||  |  |||  || || |||||    
T  34185 gaaacaagttttgggagaaaagaaccaagaacaaggggagagaagaacaagtagagccaagatcacccgtgtgtcgtgcgat--ttc--ctgaaataagg 34280  T
Q  207 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  34281 taagggtgagactatctctcgataatcatagtatataatttctgaaaatt 34330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 39712 - 39579
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  39712 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 39614  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  39613 aaacaagttttgggagagaaaaccaagaacaaggg 39579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 22049 - 22007
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    ||||||||||||||||||||||||||| ||| || ||||||||    
T  22049 gttcatctaaattaaggtaagggtgaggctaactttcaataat 22007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 12850 - 12983
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  12850 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 12948  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  12949 aaacaagttttgggagagaaaaccaagaacaaggg 12983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 40644 - 40749
Alignment:
Q  36 ggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt-gaaacaagttttgggagagaaaatc 134  Q
    |||||| ||||||||||||||| ||||| ||||  |||||| |||||||| | |||||||||||||||||||||  || |||||||||||||| |||| |    
T  40644 ggagttaaatgaaataaagggg-agtta-agtt--aggagttaggaaaaggagaggtcagaagcagttttacgtacaatcaagttttgggaga-aaaacc 40738  T
Q  135 aagaacaaggg 145  Q
    |||||||||||    
T  40739 aagaacaaggg 40749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 29011 - 29144
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  29011 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 29109  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  29110 aaacaagttttgggagagaaaaccaagaacaaggg 29144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 34412 - 34545
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  34412 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 34510  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  34511 aaacaagttttgggagagaaaaccaagaacaaggg 34545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 45845 - 45978
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  45845 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 45943  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  45944 aaacaagttttgggagagaaaaccaagaacaaggg 45978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 51249 - 51382
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  51249 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 51347  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  51348 aaacaagttttgggagagaaaaccaagaacaaggg 51382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 69991 - 69749
Alignment:
Q  11 taattaggatttaataaaaattaagg-gagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagtttt-acg 108  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||||| ||||||| |||  ||||| ||||||||| ||||||||||   ||||| |||    
T  69991 taattaggaattaatagaa-ttaaggagagtttaatgaaataaagggg-agttatattttggggagttaggaaaagagaaggtcagaaaacgttttgacg 69894  T
Q  109 tgaaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggt 207  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||| ||| | ||||||| ||||  ||| || ||  ||| |||||||||||||    
T  69893 tgaaacaagttttgggagagaaaaccaagaacaagggagagaagaacaagtagagccaagagaattcgatcgttgcgcgtt--ttcttctaaattaaggt 69796  T
Q  208 aagggtgagactatctctcaataatcataatctataatttctgaaaa 254  Q
    ||||||||||||| || ||||| ||| |||| |||||||| ||||||    
T  69795 aagggtgagactaactttcaatgatcttaatatataatttatgaaaa 69749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 91726 - 91754
Alignment:
Q  188 ttgttcatctaaattaaggtaagggtgag 216  Q
    |||||||||||||||||||||||||||||    
T  91726 ttgttcatctaaattaaggtaagggtgag 91754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 14206 - 14325
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  14206 taattaggatttaataaaaattaagggagattaatgaaa--aagggggagttatagttttgggagttaggaaaagaaaaggttagaagcagttttacgtg 14303  T
Q  111 aaacaagttttgggagagaaaa 132  Q
    ||||||||||||||||||||||    
T  14304 aaacaagttttgggagagaaaa 14325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 204 - 308
Target Start/End: Original strand, 14398 - 14503
Alignment:
Q  204 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtttg 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  303 atgatg 308  Q
    ||||||    
T  14498 atgatg 14503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 173427 - 173560
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | ||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  173427 taattaggatttaatagaattaaggggagtttaatgaaataaaaggggagttatagtttg-ggagttaggaaaagaaaaggtcagaagcagttttacgtg 173525  T
Q  111 aaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||| ||||||||||||    
T  173526 aaacaagttttgggagagaaaaccaagaacaaggg 173560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 55778 - 55861
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg-aaacaagttttgggaga 127  Q
    ||||||||||||| | ||||||| |||  ||||| ||||||||| ||| ||||||| ||||||||||| |||||||||||||||||    
T  55778 aatgaaataaaggtg-agttatattttggggagttaggaaaagagaag-tcagaagtagttttacgtgaaaacaagttttgggaga 55861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 751 - 856
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  751 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggttagggtt 850  T
Q  301 tgatga 306  Q
    ||||||    
T  851 tgatga 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 94; Significance: 7e-46; HSPs: 4)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 78903 - 79125
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||||| ||||||| |||  | ||| ||||||||||| ||| |||||||||||||||||    
T  78903 taattaggaattaatagaattaaggggagtttaatgaaataaagggg-agttatattttgggaagttaggaaaagaaa-ggttagaagcagttttacgtg 79000  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggtaa 209  Q
    ||||||||||||||||||||||  ||||||||||| | ||||| ||||| ||| | ||||||||||||  |||||| ||| ||| |||||||||||||||    
T  79001 aaacaagttttgggagagaaaacaaagaacaagggagagaagagcaagtagagccgagagaatccgatcgttgtgcgttt-ttcttctaaattaaggtaa 79099  T
Q  210 gggtgagactatctctcaataatcat 235  Q
    ||||||| ||| |||||||| |||||    
T  79100 gggtgaggctaactctcaatgatcat 79125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 79491 - 79547
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||||    
T  79491 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaa 79547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 45719 - 45770
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaaga 86  Q
    |||||||| ||||||||||||||||||||| ||| || ||||| |||||||||    
T  45719 agggagttaaatgaaataaagggggagtta-agtgttgggagttaggaaaaga 45770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 71890 - 71941
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaaga 86  Q
    |||||||| |||||||||||||||||||||| || || ||||| |||||||||    
T  71890 agggagttaaatgaaataaagggggagttat-gtgttgggagttaggaaaaga 71941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 11396 - 11289
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaata-aattgagggttagggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  11396 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggtt 11297  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  11296 tgatgatg 11289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 92; Significance: 1e-44; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 111937 - 111830
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagttttggaaaataaattgagggttagggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  111937 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 111838  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  111837 tgatgatg 111830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 91203 - 91259
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||||    
T  91203 taaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaa 91259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 96929 - 96985
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||||    
T  96929 taaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaa 96985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 345 - 240
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  345 taaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggttt 247  T
Q  302 gatgatg 308  Q
    |||||||    
T  246 gatgatg 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 540 - 499
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataa 52  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  540 taattaggatttaataaaaattaagggagtttaatgaaataa 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 1232 - 1129
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  1232 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggttt 1134  T
Q  302 gatga 306  Q
    |||||    
T  1133 gatga 1129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 50233 - 50130
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  50233 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggttt 50135  T
Q  302 gatga 306  Q
    |||||    
T  50134 gatga 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 86; Significance: 4e-41; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 40351 - 40483
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||  ||||| | ||||||||||||    
T  40351 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttgggggttaggaaaagaaagagtcagcatcagttttacgtg 40450  T
Q  111 aaacaagttttgg-gagagaaaatcaagaacaag 143  Q
    ||||||||||||| ||| ||||| ||||||||||    
T  40451 aaacaagttttggagag-gaaaaccaagaacaag 40483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 40532 - 40586
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  40532 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 40586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 3951 - 3905
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||  |||||||||||||||||| ||| |||||||||||||||    
T  3951 gttcatcagaattaaggtaagggtgaggctaactctcaataatcata 3905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 10196 - 10303
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtt 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||    
T  10196 taaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 10295  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  10296 tgatgatg 10303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 9987 - 10027
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9987 taattaggatttaataaaaattaagggagtttaatgaaata 10027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 1526 - 1633
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtt 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||    
T  1526 taaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 1625  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  1626 tgatgatg 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 1317 - 1357
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1317 taattaggatttaataaaaattaagggagtttaatgaaata 1357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 30912 - 30805
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaat-aaattgagggttagggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||| ||||||||    
T  30912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggattagggtt 30813  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  30812 tgatgatg 30805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 17397 - 17602
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| ||||| |||||||||||    
T  17397 taattaggaattaatagaattaaggggagtttaatgaaataaaggaggagttata-ttttgggagttaggaaaagaaaaggttagaagaagttttacgtg 17495  T
Q  111 aaacaagttttgggagag-aaaatcaagaacaagggtgggaagaacaagtggagtc-agagaatccgattattgtgcttttgttcatctaaattaaggta 208  Q
    |||||||||||||||||| |||| |||| ||||||| | |||||  |||| ||| | || |||||||||  |||||| ||| ||| ||| ||||||||||    
T  17496 aaacaagttttgggagagaaaaaccaaggacaagggagagaagaggaagtagagccaagggaatccgatcgttgtgcattt-ttcttctgaattaaggta 17594  T
Q  209 agggtgag 216  Q
    ||||||||    
T  17595 agggtgag 17602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 31110 - 31054
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttt 69  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  31110 taattaggatttaataaaaattaagggagtttaatgaaat--agggggagttatagttt 31054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 1898 - 2005
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagttttggaaaataaattgagggttagggtt 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  1898 taaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggtt 1997  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  1998 tgatgatg 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 8575 - 8682
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagttttggaaaataaattgagggttagggtt 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  8575 taaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggtt 8674  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  8675 tgatgatg 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 26098 - 26057
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaa 228  Q
    ||||||||||||||||||||||||||| || ||| |||||||    
T  26098 tttgttcatctaaattaaggtaagggtaaggctaactctcaa 26057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 6741 - 6540
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||| || | | |||||||||||||| |||||||  ||||| | ||   ||||| | |||||||||| |||||||   ||||||||||    
T  6741 taattaggatttaatagaattaaggggagtttaatgaattaaaggga-agttaca-ttaggggagttaagaaaagaaaaagtcagaaaacgttttacgtg 6644  T
Q  111 aaacaagttttgggagagaaaatcaagaacaagggtgggaagaacaagtggagtcagagaatccgattattgtgcttttgttcatctaaattaaggtaag 210  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||||  |||||| ||  ||| ||||||||||||||||    
T  6643 aaacaagttttgggagagaaaaccaagaacaagggtgagaagaacaagtagagccagagaattcgatcgttgtgcgtt--ttcttctaaattaaggtaag 6546  T
Q  211 ggtgag 216  Q
    ||||||    
T  6545 ggtgag 6540  T

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Target: scaffold0235 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 22411 - 22524
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcag-ttttacgt 109  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||| ||| ||||||||    
T  22411 taattaggatttaataaaaattgagagagtttaatgaaataaagggggagttatagttttgggagttaggaaaagaaagagtcagaatcagtttttacgt 22510  T
Q  110 gaaacaagttttgg 123  Q
    ||||||||||||||    
T  22511 gaaacaagttttgg 22524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 22594 - 22646
Alignment:
Q  203 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 255  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 18224 - 18117
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatag-ttttggaaaataaattgagggttagggtt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| ||| |||||||||||||||||||| ||||    
T  18224 taaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggttaaggtt 18125  T
Q  301 tgatgatg 308  Q
    | ||||||    
T  18124 taatgatg 18117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 18420 - 18380
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18420 taattaggatttaataaaaattaagggagtttaatgaaata 18380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 73 - 1
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  73 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 1733 - 1838
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  1733 taaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggttt 1831  T
Q  302 gatgatg 308  Q
    |||||||    
T  1832 gatgatg 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 5756 - 5861
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagggttt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||  |||  ||||||||||    
T  5756 taaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggttt 5854  T
Q  302 gatgatg 308  Q
    |||||||    
T  5855 gatgatg 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 29 - 285
Target Start/End: Original strand, 101757 - 102011
Alignment:
Q  29 aattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagca-gttttacgtgaaacaagttttgggaga 127  Q
    ||||| ||||||||||||||||||||||| ||||| |||||| ||||| | ||||||| |||| |||||  | |||||||||||||||||||||||||||    
T  101757 aattaggggagtttaatgaaataaagggg-agtta-agttttgggagttaagaaaagagaagg-cagaaaaacgttttacgtgaaacaagttttgggaga 101853  T
Q  128 gaa-aatcaagaacaagggtgg-gaagaacaagtggagtcagagaatccgattattgtg-cttttgttcatctaaattaaggtaagggtgagactatctc 224  Q
    ||| || ||||| ||||||  | ||||||||||| ||| || ||||||  |||  |||| | |  | |  ||| ||||||||||||||||||||||||||    
T  101854 gaagaaccaagagcaaggggagagaagaacaagtagagcca-agaatc--atttgtgtgtcgtgcgattttctgaattaaggtaagggtgagactatctc 101950  T
Q  225 tcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||| | ||||||| ||||||||| | ||||||| || ||| | |||||||||    
T  101951 tcaataatcatagtatataattcctgaaaattgatctaattgaattgttcttgaaaataaa 102011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 14498 - 14584
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttg 122  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||||||||||||| ||||||||||||    
T  14498 gggagtttaatgaaataaagggggagttatagttttgagagt-aggaaaagtaaaggtcagtagcagttttacgtaaaacaagttttg 14584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 9390 - 9334
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  9390 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 45275 - 45381
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaat-tgagggttagggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||||  ||| |||   ||||||||    
T  45275 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtt 45373  T
Q  301 tgatgatg 308  Q
    ||||||||    
T  45374 tgatgatg 45381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 21386 - 21272
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || || | ||||||| || || ||||   |||| ||||     
T  21386 taattaggatttaataaaaattaaggaagtttaatgaaataaaggaggagttatagttttgggggttaagaaaagagaa-gttagaaaacgtttcacgta 21288  T
Q  111 aaacaagttttgggag 126  Q
    ||||||||||||||||    
T  21287 aaacaagttttgggag 21272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 3421 - 3496
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    ||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||| || ||||||||    
T  3421 taattaggatttaataaaa-ttaagggagtttaatgaaat-aggggggagttatagttttgggagttagaaaaagaaa 3496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 3619 - 3729
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagg 297  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||| |||||||||| ||   |||   |  |||||||||||||||    
T  3619 aattcaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagg 3718  T
Q  298 gtttgatgatg 308  Q
    |||||||||||    
T  3719 gtttgatgatg 3729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 22085 - 22132
Alignment:
Q  182 gtgcttttgttcatctaaattaaggtaagggtgagactatctctcaat 229  Q
    |||||||||||||||| ||||||||||||| |||| ||| ||||||||    
T  22085 gtgcttttgttcatctgaattaaggtaaggatgaggctaactctcaat 22132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 3092 - 3167
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| || ||||||||    
T  3092 taattaggatttaataaaaattaagggagtttaatgaaat--agggggagttatagttttgggagttagaaaaagaaa 3167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 3290 - 3400
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattaacctaattgcatagttttggaaaataaattgagggttagg 297  Q
    |||| |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||| |||||||||| ||   ||||  |  |||||||||||||||    
T  3290 aattcaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagg 3389  T
Q  298 gtttgatgatg 308  Q
    |||||||||||    
T  3390 gtttgatgatg 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 2927 - 2967
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2927 taattaggatttaataaaaattaagggagtttaatgaaata 2967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 16878 - 16792
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||||||| || ||| | |||||||||    
T  16878 aattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaa 16792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 5 - 91
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagttttggaaaataaa 285  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| | ||||||| || ||| | |||||||||    
T  5 aattaaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaa 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 16109 - 16034
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||| || ||||||||    
T  16109 taattaggatttaataaaaattaagggagtttaatgaaat--agggggagttatagttttgagagttagaaaaagaaa 16034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 12363 - 12298
Alignment:
Q  191 ttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  12363 ttcatctaaattaaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaatt 12298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 17698 - 17644
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  17698 taaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaatt 17644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 5011 - 5076
Alignment:
Q  21 ttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| || ||||||||    
T  5011 ttaataaaaattaagggagtttaatgaaat--agggggagttatagttttgggagttagaaaaagaaa 5076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 13617 - 13510
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| |||||||||||| |  ||||| ||| || ||||| ||||||||| || |||||||||||||| |||| ||||||||||||||||| ||||     
T  13617 agggagttaaatgaaataaagtg--agtta-agtattgggagttaggaaaagagaaagtcagaagcagtttcacgtaaaacaagttttgggaga-aaaac 13522  T
Q  134 caagaacaaggg 145  Q
    ||||||||||||    
T  13521 caagaacaaggg 13510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 11684 - 11630
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataa--tctataatttctga 251  Q
    |||||||||||||||||||||| ||||||||||| ||||  | ||||||||||||    
T  11684 aattaaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 256
Target Start/End: Original strand, 14931 - 15051
Alignment:
Q  134 caagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    |||||||||||| | ||||||||||| ||| || | |||||||||  |||||| |||  || ||||| |||||||||||||||||||| |||||||| ||    
T  14931 caagaacaagggagagaagaacaagtagagccaagggaatccgatcgttgtgcgttt--tcttctaa-ttaaggtaagggtgagactaactctcaatgat 15027  T
Q  233 cataatctataatttctgaaaatt 256  Q
    | |||| |||||||||||||||||    
T  15028 cttaatatataatttctgaaaatt 15051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 1939 - 2015
Alignment:
Q  69 ttaggagtgaggaaaagaaaaggtcagaagcagttttacgt-gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||| |||||| | |||||| ||||||||||||||||  ||||||||||||||||| |||| ||||||||||||    
T  1939 ttaggagttaggaaagggaaaggtaagaagcagttttacgtacaaacaagttttgggaga-aaaaccaagaacaaggg 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 24188 - 24080
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaat 133  Q
    |||||||| |||||||||||| || ||||| ||| || ||||| ||||||||  ||||||||||||||||| |||| ||||||||||||||||| ||||     
T  24188 agggagttgaatgaaataaagcgg-agtta-agtattgggagttaggaaaagggaaggtcagaagcagtttcacgtaaaacaagttttgggaga-aaaac 24092  T
Q  134 caagaacaaggg 145  Q
    |||| |||||||    
T  24091 caaggacaaggg 24080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 13630 - 13525
Alignment:
Q  37 gagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaa 136  Q
    ||||| ||||||||||||||| ||||| ||| || ||||| ||||||||  |||||| |||||||||| | || ||||||||||||||||| |||| |||    
T  13630 gagttaaatgaaataaagggg-agtta-agtattgggagttaggaaaagggaaggtcggaagcagtttcatgtaaaacaagttttgggaga-aaaaccaa 13534  T
Q  137 gaacaaggg 145  Q
    |||||||||    
T  13533 gaacaaggg 13525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 10503 - 10430
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    |||||||||||||||||||||||||||||||||||||||||   ||| |||||||| ||| ||||| |||||||||||    
T  10503 taattaggatttaataaaaattaagggagtttaatgaaata---gggaagttatag-tttgggagttaggaaaagaaa 10430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 10293 - 10237
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    |||||||||||||||| |||||  ||||||||||||| | |||||||||||||||||    
T  10293 taaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaa 10237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1913 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 1080 - 1014
Alignment:
Q  20 tttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaa 88  Q
    |||||||||||||||||||||||||||||| ||  |||||||||||||||| ||||| || ||||||||    
T  1080 tttaataaaaattaagggagtttaatgaaacaa--ggggagttatagttttgggagttagaaaaagaaa 1014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 2078 - 2135
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctata 243  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| ||| ||||||    
T  2078 ttttgttcatctaaattaaggtaagggtgagactaactttcaataattatagtctata 2135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 6053 - 5981
Alignment:
Q  72 ggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||| ||||| |||||| |||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  6053 ggagttaggaatagaaaaagtcagaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaaggg 5981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 5944 - 5883
Alignment:
Q  191 ttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 252  Q
    ||||||| |||||||||||||||||| ||| |  |||||||||||| | ||||| |||||||    
T  5944 ttcatctgaattaaggtaagggtgaggctaacattcaataatcatagtgtataaattctgaa 5883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 121985 - 121904
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||| |||||| ||||||||||| |||||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||    
T  121985 gattgttgtgcatttgttcatctgaattaaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaatt 121904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 132861 - 132780
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||| |||||| ||||||||||| |||||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||    
T  132861 gattgttgtgcatttgttcatctgaattaaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaatt 132780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 2422 - 2466
Alignment:
Q  101 gttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  2422 gttttacgtgaaacaagttttgggagagaaaaccaagaacaaggg 2466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 8747 - 8787
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8747 taattaggatttaataaaaattaagggagtttaatgaaata 8787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 1539 - 1378
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatc-aagaacaagggtgggaagaacaagtggagtca-gagaatccgattattgtgcttttgttcatctaa 199  Q
    ||||||||||||||||||||||||||||||| | |||||| | || | ||||||||||| ||| || ||  ||||||||   |||    ||||  ||| |    
T  1539 ttttacgtgaaacaagttttgggagagaaaaaccaagaactaaggagagaagaacaagtagagccaagatcatccgattgccgtg----tgtttttctga 1444  T
Q  200 attaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaatt 265  Q
    | |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||| | ||||||    
T  1443 aataaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 2053 - 2093
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2053 taattaggatttaataaaaattaagggagtttaatgaaata 2093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 13895 - 13969
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagtttt 275  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||||| ||||||| ||||||||    
T  13895 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaattaatctaattgaatagtttt 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 5761 - 5872
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaaca-ag-ttttgggagagaaa 131  Q
    |||||||| | ||||||||||||||||||| ||| || ||||| ||||||||| || ||||||| | |||||||||  |||| || |||||||||| |||    
T  5761 agggagttaagtgaaataaagggggagtta-agtgtttggagttaggaaaagagaaagtcagaaacggttttacgtacaacagagcttttgggaga-aaa 5858  T
Q  132 atcaagaacaaggg 145  Q
    | ||||||||||||    
T  5859 accaagaacaaggg 5872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 1508 - 1453
Alignment:
Q  198 aaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 253  Q
    ||||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1508 aaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 5858 - 5929
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagtt 273  Q
    ||||||||||||| || ||||| ||||| || ||||| ||||||||||||||||||| ||||||| ||||||    
T  5858 taaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagtt 5929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 14002 - 13909
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcag-aagcagttttacgtg-aaacaagttttgggaga 127  Q
    |||||||| ||||||||||| |||||||||| || || ||||| |||||||||||  ||||| ||||||||||||||| |||||||||||||||||    
T  14002 agggagttaaatgaaataaa-ggggagttat-gtattgggagttaggaaaagaaacagtcagaaagcagttttacgtgaaaacaagttttgggaga 13909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 71310 - 71357
Alignment:
Q  169 gaatccgattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  71310 gaatccgattgttgtgcttttgttcatctaaattaaggtaaggatgag 71357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 45507 - 45439
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaa 113  Q
    ||||||||||||||| ||||||| |||  ||||| ||||||||||| |||||||| || ||||||||||||    
T  45507 aatgaaataaagggg-agttatattttggggagttaggaaaagaaa-ggtcagaaacatttttacgtgaaa 45439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 493029 - 493099
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagtt 273  Q
    |||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||| ||||| | ||||||    
T  493029 taaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 1988 - 2034
Alignment:
Q  190 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 236  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  1988 gttcatctaaattaaggtaagggtgaggctaactctcaataatcata 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 39636 - 39674
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaa 49  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39636 taattaggatttaataaaaattaagggagtttaatgaaa 39674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 769 - 680
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattaacctaattgcatagttttggaaaataaattgag 290  Q
    ||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||||||||||  | |||||| | ||||||||||||||    
T  769 taaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 39496 - 39561
Alignment:
Q  191 ttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||  |||||||||||||| ||| |||||||| |||||||| ||||||||| |||||||    
T  39496 ttcatctaaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaatt 39561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 4083 - 3949
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaa-tgaaataaagggggagttatagttttaggagtgaggaaaagaaaag-gtcagaagcagttttacg 108  Q
    |||||||||||||||| || ||||||| |  ||| ||||||||  ||||| ||||| ||| || ||| ||||||||||||| |||||||    |||||||    
T  4083 taattaggatttaatagaa-ttaagggggagtaaatgaaataa--ggggacttataatttgagaagttaggaaaagaaaagagtcagaactgcttttacg 3987  T
Q  109 tgaaac-aagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||| ||| |||||||||||||| ||||||||||||    
T  3986 tgaaaccaagctttgggagagaaaaccaagaacaaggg 3949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 1913 - 1969
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaa 1969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 57064 - 57024
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaata 51  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  57064 taattaggatttaataagaattaagggagtttaatgaaata 57024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 49971 - 50027
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| || ||||| |||||| ||||||| | |||||||| ||||||||    
T  49971 taaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaaaattaa 50027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 135492 - 135436
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||| |||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  135492 taaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaattaa 135436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 1478 - 1549
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattg 266  Q
    ||||||||||||||||||||||| |||||  |||| ||| |||| |  |||||||||||||||| |||||||    
T  1478 tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatctaattg 1549  T

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Target: scaffold0506 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 9336 - 9293
Alignment:
Q  102 ttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  9336 ttttacgtgaaaccagttttgggagagaaaaccaagaacaaggg 9293  T

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Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 13951 - 14046
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaa----acaagttttgggaga 127  Q
    ||||||| ||||||||||||||| ||||||   ||  ||||| |||||||||||  ||||||||||||||||||||||    |||||||||||||||    
T  13951 gggagttaaatgaaataaagggg-agttatgtattggggagttaggaaaagaaacagtcagaagcagttttacgtgaaatagacaagttttgggaga 14046  T

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Target: scaffold1032 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 2635 - 2704
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaa 113  Q
    ||||||||||||||| ||||||| |||  ||||| |||||||||||||||||||| |  ||||||||||||    
T  2635 aatgaaataaagggg-agttatattttggggagttaggaaaagaaaaggtcagaaacgtttttacgtgaaa 2704  T

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Target: scaffold1290 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 381 - 422
Alignment:
Q  175 gattattgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  381 gatttttgtgcttttgttcatctgaattaaggtaagggtgag 422  T

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Target: scaffold0669 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 775 - 851
Alignment:
Q  69 ttaggagtgaggaaaagaaaaggtcagaagcagttttacgt-gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||| |||||| | | |||||||||||||||||||||  || |||||||||||||| |||| ||||||||||||    
T  775 ttaggagttaggaaagggagaggtcagaagcagttttacgtacaatcaagttttgggaga-aaaaccaagaacaaggg 851  T

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Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 2625 - 2682
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||    
T  2625 aattaaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaatt 2682  T

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Target: scaffold0309 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 9296 - 9236
Alignment:
Q  84 agaaaaggtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||| |||||||||| ||| |||| ||||||||||||||||| |||| ||||||||||||    
T  9296 agaaaaagtcagaagcaatttcacgtaaaacaagttttgggaga-aaaaccaagaacaaggg 9236  T

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Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 23570 - 23631
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaa 263  Q
    ||||||||||||| || ||||| | ||| |||||||| ||||||||||||||||||| ||||    
T  23570 taaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaa 23631  T

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Target: scaffold0261; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 8258 - 8335
Alignment:
Q  35 gggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcag-aagcagttttacgtgaaa 113  Q
    ||||||| ||||||||||| |||||||||| || || ||||| |||||||||||  ||||| ||||||||||||||||||    
T  8258 gggagttaaatgaaataaa-ggggagttat-gtattgggagttaggaaaagaaacagtcagaaagcagttttacgtgaaa 8335  T

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Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 7046 - 6977
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    ||||||||||| ||||||| |||||||||| ||| |||||||| || ||||| | ||| |||||||||||    
T  7046 tttgttcatctgaattaagataagggtgaggctaactctcaatgattataatatctaacttctgaaaatt 6977  T

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Target: scaffold0298 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 658 - 618
Alignment:
Q  197 taaattaaggtaagggtgagactatctctcaataatcataa 237  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  658 taaattaaggtaagggtgagactaactctcaataattataa 618  T

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Target: scaffold0207 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 9722 - 9679
Alignment:
Q  186 ttttgttcatctaaattaaggtaagggtgagactatctctcaata 230  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||    
T  9722 ttttgttcatc-aaattaaggtaagggtgagattatctctcaata 9679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 73337 - 73277
Alignment:
Q  204 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaat 264  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||| |||||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaat 73277  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 170868 - 170912
Alignment:
Q  101 gttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||    
T  170868 gttttacgtgaaacaagttttgaaagagaaaaccaagaacaaggg 170912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 206753 - 206809
Alignment:
Q  72 ggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaaca-agttttgggaga 127  Q
    ||||| |||||||||||  |||||||||| |||||||||||||| ||||||||||||    
T  206753 ggagttaggaaaagaaacagtcagaagcaattttacgtgaaacagagttttgggaga 206809  T

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Target: scaffold0453 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 10551 - 10622
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaacctaattgcatagtt 273  Q
    ||||||||| ||| || ||||| ||||| ||| |||| ||||||||||||||||||| ||||| | ||||||    
T  10551 taaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagtt 10622  T

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Target: scaffold0205 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 28413 - 28348
Alignment:
Q  46 gaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaa 113  Q
    |||||||||||| ||||||| |||  ||||| ||||||||| ||| ||||||||||||||||||||||    
T  28413 gaaataaagggg-agttatattttggggagttaggaaaagagaag-tcagaagcagttttacgtgaaa 28348  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 17165 - 17238
Alignment:
Q  34 agggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgt 109  Q
    |||||||| ||||||||||||||||||||| ||| || ||||| ||||||||| |||| ||||| | |||||||||    
T  17165 agggagttaaatgaaataaagggggagtta-agtgttgggagttaggaaaagagaagg-cagaaactgttttacgt 17238  T

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Target: scaffold1233 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1233
Description:

Target: scaffold1233; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 55 - 1
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttata 65  Q
    |||||| ||||||||| || | | ||||||||||||||||||| |||||||||||    
T  55 taattatgatttaatagaattaaggggagtttaatgaaataaaaggggagttata 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 1614 - 1530
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaa 97  Q
    ||||||||| |||||| || | | ||||||||||||||||||| ||||||||||| |||| ||||| | |||||||||  |||||||    
T  1614 taattaggaattaatagaattaaggggagtttaatgaaataaa-ggggagttatatttttgggagtta-gaaaagaaatagtcagaa 1530  T

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Target: scaffold0583 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 5563 - 5510
Alignment:
Q  91 gtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||| ||||||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  5563 gtcaaaagcagtttcacgtaaaacaagttttgggaga-aaaaccaagaacaaggg 5510  T

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Target: scaffold0480 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 1523 - 1493
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaat 229  Q
    |||||||||||||||||||||||||||||||    
T  1523 aattaaggtaagggtgagactatctctcaat 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 4419 - 4319
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||||||||||||||| ||||||||||| |||  ||||| | ||||||| || ||||||| |  |||||||||    
T  4419 taattaggaattaatagaattaaggggagtttaatgaaataaa-ggggagttatattttggggagttaagaaaagagaa-gtcagaaacgtttttacgtg 4322  T
Q  111 aaa 113  Q
    |||    
T  4321 aaa 4319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 31016 - 30916
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtg 110  Q
    ||||||||| |||||| || | | ||||||| ||||||||||| |||||||||   |||  ||||| ||||||||| || ||||||||| ||||||||||    
T  31016 taattaggaattaatagaattaaggggagttaaatgaaataaa-ggggagttaatatttggggagttaggaaaagagaa-gtcagaagcggttttacgtg 30919  T
Q  111 aaa 113  Q
    |||    
T  30918 aaa 30916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 22690 - 22724
Alignment:
Q  11 taattaggatttaataaaaattaagggagtttaat 45  Q
    ||||||| |||||||||||||||||||||||||||    
T  22690 taattagaatttaataaaaattaagggagtttaat 22724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 16437 - 16505
Alignment:
Q  43 aatgaaataaagggggagttatagttttaggagtgaggaaaagaaaaggtcagaagcagttttacgtgaaa 113  Q
    ||||||||||||||| ||||||| |||  ||||| ||||||||||| |||||||| || ||||||||||||    
T  16437 aatgaaataaagggg-agttatattttggggagttaggaaaagaaa-ggtcagaaacatttttacgtgaaa 16505  T

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Target: scaffold0046 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 71695 - 71642
Alignment:
Q  91 gtcagaagcagttttacgtgaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||| |||| ||||||||||||||||| | || ||||||||||||    
T  71695 gtcagaagcagtttcacgtaaaacaagttttgggaga-agaaccaagaacaaggg 71642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 791 - 734
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 256  Q
    |||||||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||    
T  791 aattaaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaatt 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 676 - 721
Alignment:
Q  203 aaggtaagggtgagactatctctcaataatcataatctataatttc 248  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  676 aaggtaagggtgagactaactctcaatgatcttaatgtataatttc 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 7730 - 7693
Alignment:
Q  199 aattaaggtaagggtgagactatctctcaataatcata 236  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  7730 aattaaggtaagggtgaggctaactctcaataatcata 7693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 26573 - 26517
Alignment:
Q  89 aggtcagaagcagttttacgt-gaaacaagttttgggagagaaaatcaagaacaaggg 145  Q
    |||||||||||||||||||||  || |||||||||||||| |||| ||||||||||||    
T  26573 aggtcagaagcagttttacgtacaatcaagttttgggaga-aaaaccaagaacaaggg 26517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 174092 - 174137
Alignment:
Q  187 tttgttcatctaaattaaggtaagggtgagactatctctcaataat 232  Q
    |||||||||||||||||||||||||||||  ||| || ||||||||    
T  174092 tttgttcatctaaattaaggtaagggtgaagctaactttcaataat 174137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 5615 - 5579
Alignment:
Q  91 gtcagaagcagttttacgtgaaacaagttttgggaga 127  Q
    |||||||||||||| |||| |||||||||||||||||    
T  5615 gtcagaagcagtttcacgtaaaacaagttttgggaga 5579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 11014 - 11086
Alignment:
Q  195 tctaaattaaggtaagggtgagactatctctcaataatcataatctataa-tttctgaaaattaacctaattg 266  Q
    ||||||||||||||||||||||| |||||  |||| ||| |||| |  || |||||||||||||| |||||||    
T  11014 tctaaattaaggtaagggtgagattatcttgcaatgatcttaatatgcaattttctgaaaattaatctaattg 11086  T

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Target: scaffold0326 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 4508 - 4544
Alignment:
Q  180 ttgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  4508 ttgtgcatttgttcatctgaattaaggtaagggtgag 4544  T

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Target: scaffold0326; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 19690 - 19726
Alignment:
Q  180 ttgtgcttttgttcatctaaattaaggtaagggtgag 216  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  19690 ttgtgcatttgttcatctgaattaaggtaagggtgag 19726  T

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Target: scaffold0131 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 1051 - 995
Alignment:
Q  202 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattaa 258  Q
    ||||||||||||| ||  ||||||||||| | ||||| ||| |||||||||||||||    
T  1051 taaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaaattaa 995  T

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