View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0451Ase5 (Length: 63)
Name: NF0451Ase5
Description: NF0451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0451Ase5 |
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Alignment Details
Target: chr4 (Bit Score: 45; Significance: 2e-17; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-17
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 51500388 - 51500436
Alignment:
| Q |
7 |
taatccttatatcacaagcatatacatcactttacaaacactggaacac |
55 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
51500388 |
taatccttatatcacaagcatatacatcactttacaaacactgaaacac |
51500436 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 24767214 - 24767166
Alignment:
| Q |
7 |
taatccttatatcacaagcatatacatcactttacaaacactggaacac |
55 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
24767214 |
taatccttttatcacaagtatatacatcactttacaaacactgaaacac |
24767166 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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