View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0451_high_6 (Length: 251)
Name: NF0451_high_6
Description: NF0451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0451_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 25704275 - 25704041
Alignment:
| Q |
11 |
cataggaccacaataagttacaaggcgcgttaattaacatcgttatgaataagctgaaaagtgcaattttgacgatgttatagaaggtcaaatacattac |
110 |
Q |
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| T |
25704275 |
cataggaccacaataagttacaaggcgcgttaattaacatcgttatgaataagctgaaaagtgcaattttgacgatgttatagaaggtcaaatacattac |
25704176 |
T |
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| Q |
111 |
acaaccctttcctttccttaactccattgtgtatatagaaaattcatagaagtcaaacataacaatcccaattcacaaatcgcattctcactttcgagaa |
210 |
Q |
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||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25704175 |
acaaccctttcctttccttaacttcat--tgtatatagaaaattcatagaagtcaaacataacaatcccaattcacaaatcgcattctcactttcgagaa |
25704078 |
T |
|
| Q |
211 |
tacnnnnnnncacgcactctactcaaaacattacgtg |
247 |
Q |
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||| ||||||||||||||||||||||||||| |
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| T |
25704077 |
tacaaaaaaacacgcactctactcaaaacattacgtg |
25704041 |
T |
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