View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0451_high_7 (Length: 240)

Name: NF0451_high_7
Description: NF0451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0451_high_7
NF0451_high_7
[»] chr7 (27 HSPs)
chr7 (29-229)||(24046595-24046798)
chr7 (179-236)||(21558191-21558248)
chr7 (179-236)||(37473677-37473734)
chr7 (179-230)||(27445059-27445110)
chr7 (182-236)||(4572256-4572310)
chr7 (179-233)||(45228981-45229035)
chr7 (179-236)||(2446371-2446428)
chr7 (179-236)||(3174990-3175047)
chr7 (179-236)||(15905630-15905687)
chr7 (179-236)||(18313784-18313841)
chr7 (179-232)||(25590678-25590731)
chr7 (179-236)||(30579398-30579455)
chr7 (179-236)||(41487422-41487479)
chr7 (179-236)||(41519221-41519277)
chr7 (180-236)||(7309419-7309474)
chr7 (179-235)||(27313690-27313746)
chr7 (182-236)||(20335790-20335844)
chr7 (179-236)||(279910-279967)
chr7 (179-236)||(5668527-5668584)
chr7 (179-236)||(9183147-9183204)
chr7 (179-236)||(15137616-15137673)
chr7 (179-236)||(16708411-16708468)
chr7 (179-236)||(17682647-17682704)
chr7 (179-236)||(43663051-43663108)
chr7 (179-236)||(45709664-45709721)
chr7 (191-231)||(11735446-11735486)
chr7 (179-215)||(42885207-42885243)
[»] chr3 (20 HSPs)
chr3 (179-236)||(10499065-10499122)
chr3 (179-236)||(54990765-54990822)
chr3 (179-236)||(33278976-33279033)
chr3 (179-236)||(36015511-36015568)
chr3 (179-236)||(52769939-52769996)
chr3 (179-236)||(49397497-49397554)
chr3 (179-236)||(51903834-51903891)
chr3 (179-233)||(7973622-7973676)
chr3 (179-236)||(19154694-19154751)
chr3 (179-236)||(47454573-47454630)
chr3 (180-236)||(40268551-40268607)
chr3 (179-236)||(2597175-2597233)
chr3 (179-236)||(2667925-2667982)
chr3 (179-236)||(16991605-16991662)
chr3 (179-236)||(33899677-33899734)
chr3 (179-215)||(8075083-8075119)
chr3 (200-236)||(14186710-14186746)
chr3 (179-235)||(25035769-25035825)
chr3 (179-231)||(33861690-33861742)
chr3 (180-236)||(44069821-44069877)
[»] chr2 (27 HSPs)
chr2 (182-236)||(31573600-31573654)
chr2 (179-233)||(42222947-42223001)
chr2 (179-236)||(25637214-25637271)
chr2 (179-236)||(33582036-33582093)
chr2 (179-236)||(37971958-37972015)
chr2 (179-236)||(2311787-2311844)
chr2 (179-236)||(26545903-26545960)
chr2 (179-236)||(35203339-35203396)
chr2 (179-236)||(38854418-38854475)
chr2 (179-236)||(42327351-42327408)
chr2 (179-231)||(1435131-1435183)
chr2 (179-230)||(41390292-41390343)
chr2 (179-230)||(41504892-41504943)
chr2 (179-233)||(42602620-42602674)
chr2 (179-236)||(2295975-2296032)
chr2 (179-236)||(9318031-9318088)
chr2 (191-236)||(12632781-12632826)
chr2 (179-236)||(16951441-16951498)
chr2 (179-236)||(17022106-17022163)
chr2 (179-236)||(21213832-21213889)
chr2 (179-236)||(26276418-26276475)
chr2 (179-236)||(29503334-29503390)
chr2 (179-212)||(34310838-34310871)
chr2 (179-236)||(37480138-37480195)
chr2 (180-236)||(3660965-3661021)
chr2 (179-235)||(21303950-21304006)
chr2 (179-215)||(26773093-26773129)
[»] chr8 (22 HSPs)
chr8 (179-236)||(968425-968482)
chr8 (179-236)||(18546318-18546375)
chr8 (173-236)||(3058000-3058062)
chr8 (179-230)||(8485068-8485119)
chr8 (179-233)||(11492029-11492083)
chr8 (179-236)||(3624643-3624699)
chr8 (179-236)||(8867491-8867548)
chr8 (179-236)||(16843751-16843807)
chr8 (179-236)||(28783123-28783180)
chr8 (179-236)||(29858005-29858062)
chr8 (179-215)||(7347921-7347957)
chr8 (176-236)||(44543954-44544014)
chr8 (179-216)||(1100580-1100617)
chr8 (179-236)||(11819839-11819896)
chr8 (179-236)||(16852403-16852460)
chr8 (176-209)||(34966803-34966836)
chr8 (184-236)||(6536583-6536635)
chr8 (179-235)||(31408078-31408134)
chr8 (192-236)||(40591792-40591836)
chr8 (179-215)||(40791851-40791887)
chr8 (179-215)||(44780070-44780106)
chr8 (179-211)||(44864222-44864254)
[»] chr5 (18 HSPs)
chr5 (179-236)||(16773870-16773927)
chr5 (176-236)||(10054110-10054170)
chr5 (179-236)||(22737145-22737202)
chr5 (188-235)||(40198039-40198086)
chr5 (182-236)||(35705049-35705103)
chr5 (179-236)||(24907552-24907609)
chr5 (179-235)||(29173554-29173610)
chr5 (179-229)||(17761311-17761361)
chr5 (179-236)||(21589351-21589408)
chr5 (179-236)||(22020818-22020875)
chr5 (187-232)||(24652942-24652987)
chr5 (192-229)||(26221274-26221311)
chr5 (179-236)||(29075844-29075901)
chr5 (179-236)||(30000179-30000236)
chr5 (179-236)||(43442259-43442316)
chr5 (179-215)||(17028220-17028256)
chr5 (179-215)||(28285336-28285372)
chr5 (179-211)||(30109265-30109297)
[»] chr4 (28 HSPs)
chr4 (179-236)||(7949410-7949467)
chr4 (179-236)||(15341775-15341832)
chr4 (173-236)||(51954177-51954240)
chr4 (188-233)||(5118973-5119018)
chr4 (179-236)||(30938175-30938232)
chr4 (179-236)||(32662817-32662874)
chr4 (180-233)||(38838863-38838916)
chr4 (180-231)||(12793868-12793919)
chr4 (185-235)||(19531964-19532014)
chr4 (179-233)||(27104984-27105038)
chr4 (179-233)||(28635762-28635816)
chr4 (182-236)||(47386750-47386804)
chr4 (179-236)||(2732057-2732114)
chr4 (179-236)||(13015490-13015547)
chr4 (179-216)||(13901825-13901862)
chr4 (179-236)||(18525423-18525480)
chr4 (207-240)||(30557254-30557287)
chr4 (179-236)||(49576850-49576907)
chr4 (179-212)||(49938792-49938825)
chr4 (179-215)||(3611649-3611685)
chr4 (179-215)||(8030160-8030196)
chr4 (179-235)||(22429672-22429728)
chr4 (179-235)||(23491985-23492041)
chr4 (184-236)||(30584783-30584835)
chr4 (179-231)||(32558289-32558341)
chr4 (181-213)||(37720172-37720204)
chr4 (176-212)||(40283939-40283975)
chr4 (180-236)||(49262641-49262697)
[»] scaffold0258 (1 HSPs)
scaffold0258 (181-236)||(15281-15336)
[»] chr6 (15 HSPs)
chr6 (179-236)||(12234463-12234520)
chr6 (179-236)||(32250806-32250863)
chr6 (179-236)||(33549167-33549224)
chr6 (179-234)||(18263905-18263960)
chr6 (179-233)||(2484786-2484840)
chr6 (179-229)||(6758378-6758428)
chr6 (179-236)||(6385925-6385982)
chr6 (179-236)||(12633072-12633129)
chr6 (179-212)||(18562594-18562627)
chr6 (179-236)||(20213104-20213161)
chr6 (179-236)||(22107127-22107184)
chr6 (179-236)||(30127463-30127520)
chr6 (179-236)||(31622947-31623004)
chr6 (179-231)||(1056641-1056693)
chr6 (181-233)||(24641148-24641200)
[»] chr1 (21 HSPs)
chr1 (179-236)||(952574-952631)
chr1 (179-236)||(12587333-12587389)
chr1 (180-236)||(7219875-7219931)
chr1 (179-214)||(25297857-25297892)
chr1 (179-236)||(2220035-2220092)
chr1 (179-236)||(6650658-6650715)
chr1 (179-236)||(16893457-16893514)
chr1 (179-236)||(23471041-23471098)
chr1 (179-235)||(21547436-21547492)
chr1 (179-230)||(1094594-1094645)
chr1 (182-236)||(18037572-18037626)
chr1 (179-236)||(4566611-4566667)
chr1 (179-236)||(6122857-6122914)
chr1 (179-232)||(18334978-18335031)
chr1 (179-236)||(31383754-31383811)
chr1 (179-212)||(36124920-36124953)
chr1 (179-236)||(44961828-44961885)
chr1 (179-235)||(3799970-3800026)
chr1 (179-235)||(14787292-14787348)
chr1 (186-230)||(16019385-16019429)
chr1 (188-236)||(51814557-51814605)
[»] scaffold0118 (2 HSPs)
scaffold0118 (179-236)||(41589-41646)
scaffold0118 (179-230)||(44063-44114)
[»] scaffold0115 (1 HSPs)
scaffold0115 (180-236)||(42621-42677)
[»] scaffold0008 (1 HSPs)
scaffold0008 (179-235)||(49370-49426)
[»] scaffold0070 (1 HSPs)
scaffold0070 (179-236)||(42477-42533)
[»] scaffold0032 (1 HSPs)
scaffold0032 (180-233)||(112348-112401)
[»] scaffold0194 (1 HSPs)
scaffold0194 (200-236)||(13023-13059)
[»] scaffold0021 (1 HSPs)
scaffold0021 (179-235)||(156945-157001)


Alignment Details
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 29 - 229
Target Start/End: Complemental strand, 24046798 - 24046595
Alignment:
Q  29 acatagttggtcataaatgtgaccaagagtaaacccttctaatacactcctttagcatattatccgcagtcgtgatttggattg--aaataannnnnnnn 126  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||            
T  24046798 acatacttgatcataaatgtgaccaagagtaaacccttctaatacactcctttagcatattatccgcagtcgtgatttggattgcaacataatttttttt 24046699  T
Q  127 ngatgtcttgatattcaaagtgactctaattgaggcaacattagccac-attgtttttgaagaagctaaattatcccacctaaattgacatcgaagagaa 225  Q
     || |||||||||||||||||||||||||||||||||||| ||||| |  || ||||| |||||||||||||| ||||| |||||||||| || ||||||    
T  24046698 tgacgtcttgatattcaaagtgactctaattgaggcaacactagccgcgttttttttttaagaagctaaattagcccacttaaattgacaccggagagaa 24046599  T
Q  226 tcga 229  Q
    ||||    
T  24046598 tcga 24046595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 21558248 - 21558191
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||||| || |  |||||||||||||||||    
T  21558248 tttttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgag 21558191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 37473734 - 37473677
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||||||||||||||    ||||||||||||||||    
T  37473734 tttttgaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgag 37473677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 27445110 - 27445059
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaa 230  Q
    |||||||||||| |||||||||||||||||||||| | ||| ||||||||||    
T  27445110 tttttgaagaagttaaattatcccacctaaattgaaaccgaggagaatcgaa 27445059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 4572256 - 4572310
Alignment:
Q  182 ttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||| ||||||| |||||| ||||||||| || |||||||||||||||||    
T  4572256 ttgaagaagataaattagcccacccaaattgacaccggagagaatcgaacctgag 4572310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 45228981 - 45229035
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||||||||||||||| ||||| ||||||||||  | ||||||||||||||    
T  45228981 tttttgaagaagctaaattagcccacttaaattgacactggagagaatcgaacct 45229035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 2446428 - 2446371
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||| | || || |||||||||||| ||||    
T  2446428 tttttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgag 2446371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 3175047 - 3174990
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| |||| ||||||||| || | |||||||||||||||||    
T  3175047 ttttttaagaagctaaattaacccaactaaattgatattggagagaatcgaacctgag 3174990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 15905630 - 15905687
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| ||||||||||    ||||||||||||||||    
T  15905630 tttttgaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgag 15905687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 18313784 - 18313841
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||| ||| ||||||| ||||| |||||| | ||||||||||||||||||||||    
T  18313784 tttttgaaaaagttaaattaacccacttaaattaatatcgaagagaatcgaacctgag 18313841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 25590731 - 25590678
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacc 232  Q
    |||||||||||||||||||| |||||  ||||||||| |||||| |||||||||    
T  25590731 tttttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacc 25590678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 30579455 - 30579398
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||||| || |  ||| |||||||||||||    
T  30579455 tttttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgag 30579398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 41487479 - 41487422
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||||| || ||   |||||||||||||||    
T  41487479 tttttgaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgag 41487422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 41519221 - 41519277
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||||||||||||| |  |||||| ||||||||||    
T  41519221 tttttgaagaagctaaattagcccacctaaattgaca-cagagagaagcgaacctgag 41519277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 7309474 - 7309419
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||| ||||| |||||||||| || |||||||||||| ||||    
T  7309474 ttttgaagaagctaaattagcccacttaaattgaca-cggagagaatcgaacttgag 7309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 27313690 - 27313746
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    |||||||||||||||||||| | ||||||||||| ||||  ||||||||||| ||||    
T  27313690 tttttgaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctga 27313746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 20335790 - 20335844
Alignment:
Q  182 ttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||| ||||||| |||| | ||||||||||||  ||||||||||||||||    
T  20335790 ttgaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgag 20335844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 279910 - 279967
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| |||||| |||||| || || ||||||| |||||||||    
T  279910 ttttttaagaagctaaattagcccacccaaattggcaccggagagaattgaacctgag 279967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 5668527 - 5668584
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||| |||||| ||  || |||||||||| ||||||    
T  5668527 tttttgaagaagctaaattagcccacataaattaactccggagagaatcgatcctgag 5668584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 9183147 - 9183204
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| |||||||| |||||| ||||||||| |  ||| |||||||||||||    
T  9183147 tttttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgag 9183204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 15137673 - 15137616
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| |||||||| |||||| ||||||||| |  |||||||| ||||||||    
T  15137673 tttttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgag 15137616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 16708411 - 16708468
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||||  ||| ||||||||| || | |||||||||||| ||||    
T  16708411 tttttgaagaagctaaattagtccatctaaattgatattggagagaatcgaacatgag 16708468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 17682647 - 17682704
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||||  ||| ||||||||| || | |||||||||||| ||||    
T  17682647 tttttgaagaagctaaattagtccatctaaattgatattggagagaatcgaacatgag 17682704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 43663051 - 43663108
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||||  ||||| ||||||| | || ||||| |||||||||||    
T  43663051 tttttgaagaagctaaattagtccacccaaattgataccggagagattcgaacctgag 43663108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 45709664 - 45709721
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||| ||| |||||||||||||  |||| ||| |||||||||||||    
T  45709664 tttttaaagaagctaagttagcccacctaaattggtatcggagataatcgaacctgag 45709721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 11735446 - 11735486
Alignment:
Q  191 ctaaattatcccacctaaattgacatcgaagagaatcgaac 231  Q
    |||||||||||||| ||||||| ||||| ||||||||||||    
T  11735446 ctaaattatcccacttaaattgtcatcggagagaatcgaac 11735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 42885243 - 42885207
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  42885243 tttttgaagaaactaaattaacccacctaaattgaca 42885207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 10499065 - 10499122
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  10499065 tttttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgag 10499122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 54990822 - 54990765
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  54990822 tttttgaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgag 54990765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 33278976 - 33279033
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||    
T  33278976 tttttgaagaagctaaattatcccatctaaattgacaccggagagaatcaaacctgag 33279033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 36015568 - 36015511
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||||    
T  36015568 tttttgaagaagcaaaattagcccacctaaattgacaccgaagagaatcgtacctgag 36015511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 52769939 - 52769996
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||    
T  52769939 tttttgaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgag 52769996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 49397497 - 49397554
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||||  ||||||||||||||||| |||| |||||||| ||||    
T  49397497 tttttgaagaagctaaattagtccacctaaattgacatctaagataatcgaacatgag 49397554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 51903834 - 51903891
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||  ||||||||| || |||||||||||||||||    
T  51903834 tttttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgag 51903891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 7973676 - 7973622
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    ||||||||||||||||||||  ||||| |||||||||||  ||||||||||||||    
T  7973676 tttttgaagaagctaaattagtccacccaaattgacatcagagagaatcgaacct 7973622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 19154751 - 19154694
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| ||||| ||||| || |||||| ||||||||||| ||||||||||||||||||    
T  19154751 ttttttaagaaactaaactaacccacccaaattgacatcaaagagaatcgaacctgag 19154694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 47454573 - 47454630
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| || ||||||||||||| ||| |  ||||||||||||||||    
T  47454573 tttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgag 47454630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 40268607 - 40268551
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||| || |||||| |||||| |||||  ||||||||||||||||    
T  40268607 ttttgaagaagctaaactaacccaccgaaattggcatcggggagaatcgaacctgag 40268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 2597175 - 2597233
Alignment:
Q  179 tttttgaagaagctaaatta-tcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| ||||||||||||| |||| | ||||| |||||||||||    
T  2597175 ttttttaagaagctaaattagtcccacctaaatttacatagtagagattcgaacctgag 2597233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 2667982 - 2667925
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| || ||||||||||||||||    ||| |||||||||||||    
T  2667982 tttttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgag 2667925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 16991662 - 16991605
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| ||||| ||||||| ||||| |||||||| || |||||    
T  16991662 ttttttaagaagctaaattagcccacataaattggcatcggagagaatcaaaactgag 16991605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 33899734 - 33899677
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| || ||||||||||| | |||| ||||||||| | ||||||||||||||||||    
T  33899734 ttttttaataagctaaattagcacacccaaattgacaccaaagagaatcgaacctgag 33899677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 8075083 - 8075119
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||||||||||||||||||| |||||| |||||||||    
T  8075083 tttttgaagaagctaaattagcccacccaaattgaca 8075119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 14186746 - 14186710
Alignment:
Q  200 cccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||| || |||||||||||||||||    
T  14186746 cccacctaaattgacaccggagagaatcgaacctgag 14186710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 25035825 - 25035769
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| |||||| ||||||| |||||| ||||||||| ||  |||||||||||||||    
T  25035825 ttttttaagaaggtaaattaacccacccaaattgacaccggtgagaatcgaacctga 25035769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 33861690 - 33861742
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaac 231  Q
    |||||||| ||||||||||| |||||||||||||| || |  |||||||||||    
T  33861690 tttttgaataagctaaattagcccacctaaattgatattggggagaatcgaac 33861742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 44069877 - 44069821
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||| || ||||||||||||| || || | |||||| ||||||||    
T  44069877 ttttgaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgag 44069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 31573600 - 31573654
Alignment:
Q  182 ttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  31573600 ttgaagaagttaaattagtccacctaaattgacatcgaagagaatcgaacctgag 31573654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 42223001 - 42222947
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    ||||||||||| |||||||| |||||| ||||||||| |||||||||||||||||    
T  42223001 tttttgaagaatctaaattaacccacccaaattgacaccgaagagaatcgaacct 42222947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 25637271 - 25637214
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||| ||||||| ||||||||||||| ||||| |||||| ||||||||||    
T  25637271 tttttgaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgag 25637214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 33582093 - 33582036
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||||    
T  33582093 tttttgaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgag 33582036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 37972015 - 37971958
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||| ||||||||||||| ||||||||||||| || || |||||||||||||||||    
T  37972015 tttttgtagaagctaaattagcccacctaaattggcaccggagagaatcgaacctgag 37971958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 2311844 - 2311787
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||| |||||| |||||  ||||||||| |||||| |||||||||||||    
T  2311844 tttttgaagaagccaaattagcccactcaaattgacaccgaagaaaatcgaacctgag 2311787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 26545960 - 26545903
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| ||| |||||||||| |||||||||||||| ||||||||||||| ||| ||||    
T  26545960 tttttaaagcagctaaattaacccacctaaattgatatcgaagagaatcaaacttgag 26545903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 35203339 - 35203396
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||| |||||||||| | |||| |||||||| ||||    
T  35203339 tttttgaagaagctaaattaacccacttaaattgacaccaaagataatcgaacatgag 35203396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 38854418 - 38854475
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||||||||||||  ||  || |||||||||||||    
T  38854418 tttttgaagaagctaaattagcccacctaaattgaccccggtgataatcgaacctgag 38854475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 42327351 - 42327408
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||| ||||||||| |||||| |||||| || ||||||||||||||||||||    
T  42327351 ttttttaagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgag 42327408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 1435183 - 1435131
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaac 231  Q
    |||||||||||||||||||| |||||| ||||||||| |  ||||||||||||    
T  1435183 tttttgaagaagctaaattagcccacccaaattgacaccagagagaatcgaac 1435131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 41390343 - 41390292
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaa 230  Q
    |||||||||||| ||||||| |||||| |||||| || ||||||||||||||    
T  41390343 tttttgaagaagttaaattagcccacccaaattggcaccgaagagaatcgaa 41390292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 41504892 - 41504943
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaa 230  Q
    ||||| |||||||||||||| ||||| |||||||||| || |||||||||||    
T  41504892 ttttttaagaagctaaattaacccacttaaattgacaccggagagaatcgaa 41504943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 42602674 - 42602620
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||||||||||||||| |||||| |||||| || || |||||||| |||||    
T  42602674 tttttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacct 42602620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 2296032 - 2295975
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||   ||||||||| |||||| ||||||| |||||    
T  2296032 tttttgaagaagctaaattagcccattcaaattgacaccgaagaaaatcgaatctgag 2295975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 9318031 - 9318088
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| |||||||| ||||||  ||||| ||||  |||||||||||||||||    
T  9318031 tttttgaagaaactaaattagcccacccgaattggcatcagagagaatcgaacctgag 9318088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 12632826 - 12632781
Alignment:
Q  191 ctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||| |||||||||||||||| ||| |||||| |||||||||    
T  12632826 ctaaattagcccacctaaattgacaccgatgagaattgaacctgag 12632781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 16951498 - 16951441
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||| ||||||| |||| |||||||  ||| |||||||||||||||||||    
T  16951498 ttttttaagaagttaaattagcccatctaaattagcattgaagagaatcgaacctgag 16951441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 17022163 - 17022106
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||| ||||||| |||| |||||||  ||| |||||||||||||||||||    
T  17022163 ttttttaagaagttaaattagcccatctaaattagcattgaagagaatcgaacctgag 17022106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 21213889 - 21213832
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||| ||| || ||||||||||||| || ||  ||||||||||||||||    
T  21213889 tttttgaagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgag 21213832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 26276475 - 26276418
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||| |  ||||||||||||||| ||| ||||| ||||||||||    
T  26276475 ttttttaagaagctaaatcagtccacctaaattgacaccgacgagaaacgaacctgag 26276418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 29503390 - 29503334
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||  ||||| |||||||||| ||  ||||||||||||||||    
T  29503390 tttttgaagaagctaaatttgcccacttaaattgacaccg-ggagaatcgaacctgag 29503334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 34310871 - 34310838
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattg 212  Q
    |||||||||||||||||||| |||||||||||||    
T  34310871 tttttgaagaagctaaattaacccacctaaattg 34310838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 37480195 - 37480138
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| ||||||  | ||  ||||||||||||||||    
T  37480195 tttttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgag 37480138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 3660965 - 3661021
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||   |||| |||||||||||   |||||||||||||||||    
T  3660965 ttttgaagaagctaaatttgtccacttaaattgacatttgagagaatcgaacctgag 3661021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 21303950 - 21304006
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    |||||||||||||||||||| ||| |  ||||||||| |  ||||||||||||||||    
T  21303950 tttttgaagaagctaaattaaccccctcaaattgacaccagagagaatcgaacctga 21304006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 26773093 - 26773129
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||||||||||||||||||| |||||| |||||||||    
T  26773093 tttttgaagaagctaaattagcccacccaaattgaca 26773129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 968482 - 968425
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  968482 ttttttaagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgag 968425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 18546318 - 18546375
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||||| |||||||||||||  ||  ||||||||||||||||    
T  18546318 tttttgaagaagctaaattatctcacctaaattgacgccggtgagaatcgaacctgag 18546375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 3058000 - 3058062
Alignment:
Q  173 acattgtttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| || ||||||||||||||| | |||||||||||||||  ||||||||||||||||||||    
T  3058000 acatttttcttgaagaagctaaat-agcccacctaaattgacgccgaagagaatcgaacctgag 3058062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 8485119 - 8485068
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaa 230  Q
    |||||||||||||||||||| ||||||||||||| || || |||||||||||    
T  8485119 tttttgaagaagctaaattagcccacctaaattggcaccggagagaatcgaa 8485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 11492029 - 11492083
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    ||||| |||||||||||||| |||||| |||||||||  ||||||||||||||||    
T  11492029 ttttttaagaagctaaattagcccacccaaattgacactgaagagaatcgaacct 11492083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 3624699 - 3624643
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||| ||||||||||| |||||||||||||||  || |||||||||||||||||    
T  3624699 tttttgaaaaagctaaattagcccacctaaattgac-ccggagagaatcgaacctgag 3624643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 8867548 - 8867491
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| |||||||| |||||||| || |||||| |||||||||    
T  8867548 ttttttaagaagctaaattaacccacctacattgacattgaggagaatggaacctgag 8867491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 16843751 - 16843807
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||| | |||| ||||||||||| || |||||||||||||||||    
T  16843751 tttttgaagaagctaaat-agcccatctaaattgacaccggagagaatcgaacctgag 16843807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 28783180 - 28783123
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| |||||| || ||| ||||||||||| ||||    
T  28783180 tttttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgag 28783123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 29858005 - 29858062
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||| ||||||||||| ||||||||||||| || ||| | ||||||||||||||    
T  29858005 tttttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgag 29858062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 7347957 - 7347921
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7347957 tttttgaagaagctaaattagcccacctaaattgaca 7347921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 44543954 - 44544014
Alignment:
Q  176 ttgtttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||| |||| ||  ||| | ||||||||||| ||||||||||||||||||    
T  44543954 ttgtttttgaagaagataaactagtccatccaaattgacatcaaagagaatcgaacctgag 44544014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 1100617 - 1100580
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacat 216  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  1100617 tttttgaagaagctaaattagcccatctaaattgacat 1100580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 11819896 - 11819839
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| |||||||||    || ||||||||||||||    
T  11819896 tttttgaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgag 11819839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 16852460 - 16852403
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| || ||||||||||||| ||   | ||||||||||||||||    
T  16852460 tttttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgag 16852403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 34966803 - 34966836
Alignment:
Q  176 ttgtttttgaagaagctaaattatcccacctaaa 209  Q
    ||||||||||||||||||||||| ||||||||||    
T  34966803 ttgtttttgaagaagctaaattagcccacctaaa 34966836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 6536635 - 6536583
Alignment:
Q  184 gaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||| ||||||||||||| || |  ||||||| |||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgag 6536583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 31408078 - 31408134
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| |||||||||||||| ||| | |||||||||||   ||||||||||||||||    
T  31408078 ttttttaagaagctaaattaacccccttaaattgacattagagagaatcgaacctga 31408134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 40591836 - 40591792
Alignment:
Q  192 taaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||  |||||||||||| |||||||||||||| ||||||||    
T  40591836 taaattactccacctaaattggcatcgaagagaatcaaacctgag 40591792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 40791851 - 40791887
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  40791851 tttttgaagaagctaaattagcccacttaaattgaca 40791887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 44780070 - 44780106
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||||||||||||||||||| |||||| |||||||||    
T  44780070 tttttgaagaagctaaattagcccacccaaattgaca 44780106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 44864222 - 44864254
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaatt 211  Q
    |||||||||||||||||||| ||||||||||||    
T  44864222 tttttgaagaagctaaattagcccacctaaatt 44864254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 16773927 - 16773870
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||    
T  16773927 tttttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgag 16773870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 10054170 - 10054110
Alignment:
Q  176 ttgtttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||||||||| |||||| || |||| |||| |||||||||||||||||    
T  10054170 ttgtttttgaagaagctaaattagcccacccaagttgatatcggagagaatcgaacctgag 10054110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 22737202 - 22737145
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||||||||||| |||  || ||||||||||||||    
T  22737202 tttttgaagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgag 22737145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 40198086 - 40198039
Alignment:
Q  188 aagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||    
T  40198086 aagctaaattaaaccacctaaattgacatcgaaaagaatcgaacctga 40198039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 35705103 - 35705049
Alignment:
Q  182 ttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| |||||| ||||||||| ||  ||||||||||||||||    
T  35705103 ttgaagaagctaaattagcccacccaaattgacaccggggagaatcgaacctgag 35705049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 24907609 - 24907552
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||| ||||||||||| ||||||||||||| |||| | || |||||||||||||    
T  24907609 tttttgaataagctaaattagcccacctaaattggcatcaaggataatcgaacctgag 24907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 29173610 - 29173554
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| |||||||||||||| |||||||||||||||| |  ||| ||||||||||||    
T  29173610 ttttttaagaagctaaattagcccacctaaattgacaccagagataatcgaacctga 29173554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 17761311 - 17761361
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcga 229  Q
    |||||||| ||||||||||| |||| |||||||| || |||||||||||||    
T  17761311 tttttgaaaaagctaaattaacccatctaaattggcaccgaagagaatcga 17761361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 21589408 - 21589351
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| || ||||||||||||| || |  || ||||||||||||||    
T  21589408 tttttgaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgag 21589351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 22020818 - 22020875
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| |||||||| |||||||||||| |||  | ||||||||||| |||||    
T  22020818 tttttgaagaaactaaattagcccacctaaattaacactggagagaatcgaatctgag 22020875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 24652987 - 24652942
Alignment:
Q  187 gaagctaaattatcccacctaaattgacatcgaagagaatcgaacc 232  Q
    |||||||||||| |  ||||||||||||||||||||||||| ||||    
T  24652987 gaagctaaattagcatacctaaattgacatcgaagagaatcaaacc 24652942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 26221311 - 26221274
Alignment:
Q  192 taaattatcccacctaaattgacatcgaagagaatcga 229  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  26221311 taaattaacccacctaaattgacatcggagagaatcga 26221274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 29075901 - 29075844
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||| |||||||| || |  |||||||||||| ||||    
T  29075901 tttttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgag 29075844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 30000236 - 30000179
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||| ||||||| ||||| ||||||| ||||  ||||| |||||||||||    
T  30000236 tttttgaagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgag 30000179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 43442316 - 43442259
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| |||||||| |||| | ||||||||| |  |||||||||||||||||    
T  43442316 tttttgaagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgag 43442259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 17028220 - 17028256
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  17028220 ttttagaagaagctaaattagcccacctaaattgaca 17028256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 28285372 - 28285336
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||||||||||||||||||| |||||| |||||||||    
T  28285372 tttttgaagaagctaaattagcccacccaaattgaca 28285336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 30109265 - 30109297
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaatt 211  Q
    |||||||||||||||||||| ||||||||||||    
T  30109265 tttttgaagaagctaaattagcccacctaaatt 30109297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 7949410 - 7949467
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||    
T  7949410 tttttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgag 7949467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 15341832 - 15341775
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| ||||||||  ||||||||||| |||||||||||||||||| |||||    
T  15341832 tttttgaagaatctaaattagtccacctaaattaacatcgaagagaatcgaaactgag 15341775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 51954240 - 51954177
Alignment:
Q  173 acattgtttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||||||||| |||||| ||||||||| || ||| |||| ||||||||    
T  51954240 acattttttttgaagaagctaaattagcccacccaaattgacaccggagataatcaaacctgag 51954177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 5118973 - 5119018
Alignment:
Q  188 aagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||    
T  5118973 aagctaaactatcccacctaaattgacatcggagagaattgaacct 5119018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 30938175 - 30938232
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| || ||||||||||||| ||| |  ||||||||||||||||    
T  30938175 tttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgag 30938232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 32662874 - 32662817
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||| ||||||| ||||| |||||||||| |||||| |||||||||||||    
T  32662874 ttttttaagaagttaaattagcccacttaaattgacaccgaagaaaatcgaacctgag 32662817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 38838916 - 38838863
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||||| |||||||| |||||| |||||| ||||| ||||||||||||||    
T  38838916 ttttgaagaaactaaattagcccaccgaaattgccatcggagagaatcgaacct 38838863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 12793868 - 12793919
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaac 231  Q
    ||||||||||||||||||| ||||||||||||| || |  ||||||||||||    
T  12793868 ttttgaagaagctaaattagcccacctaaattggcaccagagagaatcgaac 12793919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19531964 - 19532014
Alignment:
Q  185 aagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    |||| ||||||||| ||||||||||||| ||||  ||||||||||||||||    
T  19531964 aagatgctaaattagcccacctaaattggcatcagagagaatcgaacctga 19532014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 27104984 - 27105038
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||||||| ||||||| |||||  ||||||||| || ||||||||||||||    
T  27104984 tttttgaagaagttaaattagcccactcaaattgacaccggagagaatcgaacct 27105038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 28635816 - 28635762
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||||||||||||||| |||||| |||||| || |  ||||||||||||||    
T  28635816 tttttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacct 28635762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 47386750 - 47386804
Alignment:
Q  182 ttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| ||||||||||||||||    ||||||| |||||||||    
T  47386750 ttgaagaagctaaattagcccacctaaattgacactagagagaattgaacctgag 47386804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 2732114 - 2732057
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||| |||||||||||| || |||||| |||||| || || |||||||||||||||||    
T  2732114 ttttggaagaagctaaactagcccacccaaattggcaccggagagaatcgaacctgag 2732057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 13015547 - 13015490
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| || ||||||||||| |||||||||||||||| |  |||||||||||| ||||    
T  13015547 ttttttaataagctaaattaacccacctaaattgacacctgagagaatcgaacatgag 13015490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 13901862 - 13901825
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacat 216  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  13901862 tttttgaagaagctaaattaacccacctaaattaacat 13901825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 18525480 - 18525423
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||| |||||||  ||| ||||||||||| || |||||||||||| ||||    
T  18525480 tttttgaagaagttaaattagtccatctaaattgacaccggagagaatcgaacatgag 18525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 30557254 - 30557287
Alignment:
Q  207 aaattgacatcgaagagaatcgaacctgagccct 240  Q
    ||||||||||||||||||||||||| ||||||||    
T  30557254 aaattgacatcgaagagaatcgaacatgagccct 30557287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 49576850 - 49576907
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||| ||| |||  ||||| |||||||||| | |||||||||||||||||    
T  49576850 tttttgaagaagttaagttagtccacccaaattgacattggagagaatcgaacctgag 49576907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 49938792 - 49938825
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattg 212  Q
    |||||||||||||||||||| |||||||||||||    
T  49938792 tttttgaagaagctaaattaacccacctaaattg 49938825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 3611649 - 3611685
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  3611649 ttttttaagaagctaaattagcccacctaaattgaca 3611685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 8030160 - 8030196
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgaca 215  Q
    |||||||||||||||||||| |||||| |||||||||    
T  8030160 tttttgaagaagctaaattagcccacccaaattgaca 8030196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 22429728 - 22429672
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| ||||||||||||||| | ||  |||||||||||||||| ||||||| ||||    
T  22429728 ttttttaagaagctaaattattctactcaaattgacatcgaagataatcgaatctga 22429672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 23491985 - 23492041
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| |||||| ||||||| ||||||||||||| ||  || |||||||||||||||    
T  23491985 ttttttaagaagttaaattagcccacctaaattggcaatgaggagaatcgaacctga 23492041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 30584783 - 30584835
Alignment:
Q  184 gaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||| |||||||| | || |||||||||||||| ||| |||||||||||||    
T  30584783 gaagaaactaaattagctcatctaaattgacatcggagataatcgaacctgag 30584835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 32558341 - 32558289
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaac 231  Q
    ||||| ||||| |||||||||||||| |||||||||| | |||| ||||||||    
T  32558341 ttttttaagaaactaaattatcccacataaattgacaccaaagaaaatcgaac 32558289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 37720172 - 37720204
Alignment:
Q  181 tttgaagaagctaaattatcccacctaaattga 213  Q
    |||||||||||||||||| ||||||||||||||    
T  37720172 tttgaagaagctaaattagcccacctaaattga 37720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 40283939 - 40283975
Alignment:
Q  176 ttgtttttgaagaagctaaattatcccacctaaattg 212  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  40283939 ttgtttttgaagaagttaaattagcccacctaaattg 40283975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 49262641 - 49262697
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||| |||||||| ||||||||||||| ||  |  ||||||||||||||||    
T  49262641 ttttgaagaaactaaattagcccacctaaattggcactggggagaatcgaacctgag 49262697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 15281 - 15336
Alignment:
Q  181 tttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||    
T  15281 tttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgag 15336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 12234463 - 12234520
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| ||||||||||||||||||| |||||||||||  | |||||||||||||||||    
T  12234463 ttttttaagaagctaaattatcccatctaaattgacactggagagaatcgaacctgag 12234520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 32250806 - 32250863
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| ||||| ||||||| || || |||||||||||||||||    
T  32250806 ttttttaagaagctaaattaacccacttaaattgtcaccggagagaatcgaacctgag 32250863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 33549224 - 33549167
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| | ||||||||||| ||||  |||||||||||||||||    
T  33549224 ttttttaagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgag 33549167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 18263960 - 18263905
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctg 234  Q
    |||||||||||||||||||| ||||||||||||| ||  |  ||||||||||||||    
T  18263960 tttttgaagaagctaaattagcccacctaaattggcactggggagaatcgaacctg 18263905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 2484840 - 2484786
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||||||| ||||||| |||||  ||||||||| || ||||||||||||||    
T  2484840 tttttgaagaagttaaattagcccactcaaattgacaccggagagaatcgaacct 2484786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 6758378 - 6758428
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcga 229  Q
    |||||||||||||||||||  |||||||||||||||| |  ||||||||||    
T  6758378 tttttgaagaagctaaatttgcccacctaaattgacaccagagagaatcga 6758428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 6385982 - 6385925
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| |||||| |||||  || || |||||||||||||||||    
T  6385982 ttttttaagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgag 6385925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 12633129 - 12633072
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||| |||||||||||||||  |||| ||||||||||| | |||||||||||| ||||    
T  12633129 ttttagaagaagctaaattagtccacttaaattgacattggagagaatcgaacatgag 12633072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 18562594 - 18562627
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattg 212  Q
    |||||||||||||||||||| |||||||||||||    
T  18562594 tttttgaagaagctaaattagcccacctaaattg 18562627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 20213161 - 20213104
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| |||||||||    || ||||||||||||||    
T  20213161 tttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgag 20213104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 22107184 - 22107127
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| |||||||||    || ||||||||||||||    
T  22107184 tttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgag 22107127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 30127520 - 30127463
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||| |||||||||||| || |||||||||| || || | |||||||||||||||    
T  30127520 tttttgaggaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgag 30127463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 31622947 - 31623004
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| ||||||||| || || || || ||||||||    
T  31622947 tttttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgag 31623004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 1056641 - 1056693
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaac 231  Q
    |||||||||||||||||||| ||||||||| ||| || |  ||||||||||||    
T  1056641 tttttgaagaagctaaattaacccacctaacttggcaccagagagaatcgaac 1056693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 24641148 - 24641200
Alignment:
Q  181 tttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||||||||| ||||||| ||||||||||||| ||  || |||||||||||||    
T  24641148 tttgaagaagttaaattagcccacctaaattggcagtgaggagaatcgaacct 24641200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 952631 - 952574
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||| |||||||||||| |||||||||||||||||||  ||||||| ||||||||    
T  952631 tttttgacgaagctaaattaacccacctaaattgacatcggggagaatctaacctgag 952574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 12587389 - 12587333
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||||||||||||| || || |||||||||||||||||    
T  12587389 tttttgaagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgag 12587333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 7219875 - 7219931
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||  ||||||||||||  ||| ||||||||||||||||||    
T  7219875 ttttgaagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgag 7219931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 25297892 - 25297857
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgac 214  Q
    ||||||||||||||||||||||||||||||||||||    
T  25297892 tttttgaagaagctaaattatcccacctaaattgac 25297857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 2220092 - 2220035
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| |||||||| ||||  ||||||||||| | |||||||||||||||||    
T  2220092 tttttgaagaaactaaattagcccatttaaattgacattggagagaatcgaacctgag 2220035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 6650715 - 6650658
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| ||  ||||||||||||||| |  |||||||||||||||||    
T  6650715 tttttgaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgag 6650658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 16893514 - 16893457
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||  ||||||||| || ||| |||||||||||||    
T  16893514 tttttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgag 16893457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 23471041 - 23471098
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| || ||  ||||||||| || |||||||||||||||||    
T  23471041 tttttgaagaagctaaattagccaactcaaattgacaccggagagaatcgaacctgag 23471098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 21547436 - 21547492
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    |||||||||||| |||| || ||||||||||||| ||||  ||||||||||||||||    
T  21547436 tttttgaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctga 21547492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 1094645 - 1094594
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaa 230  Q
    |||||||||||| ||||||| ||||||||||||| || || |||||||||||    
T  1094645 tttttgaagaagttaaattagcccacctaaattggcaccggagagaatcgaa 1094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 18037572 - 18037626
Alignment:
Q  182 ttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| ||||||||||| | || || |||||||||||| ||||    
T  18037572 ttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgag 18037626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 4566667 - 4566611
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||||||||| || ||| | ||||||||||||  |||||||||||||||||    
T  4566667 tttttgaagaagctaaactaaccc-cttaaattgacatcagagagaatcgaacctgag 4566611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 6122914 - 6122857
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| |||||| |||||||||    || ||||||||||||||    
T  6122914 tttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgag 6122857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 18334978 - 18335031
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacc 232  Q
    |||||||||||||||||||| || | ||||||||||||||  || |||||||||    
T  18334978 tttttgaagaagctaaattaacctaactaaattgacatcggggaaaatcgaacc 18335031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 31383754 - 31383811
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||| ||| ||| |||||| |||||| || | ||||||||||||||||||    
T  31383754 tttttgaagaaggtaagttagcccacccaaattggcacctaagagaatcgaacctgag 31383811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 36124953 - 36124920
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattg 212  Q
    |||||||||||||||||||| |||||||||||||    
T  36124953 tttttgaagaagctaaattagcccacctaaattg 36124920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 44961885 - 44961828
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||| |||||||||||||| |||||| |||||||||    |||||||||||||||||    
T  44961885 ttttttaagaagctaaattagcccacccaaattgacactagagagaatcgaacctgag 44961828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 3800026 - 3799970
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| |||||||||||||| ||||||||||||| ||    ||||||||||||||||    
T  3800026 ttttttaagaagctaaattagcccacctaaattggcactagagagaatcgaacctga 3799970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 14787292 - 14787348
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||||||||||||||| || ||||| |||||||| ||   ||||||||||||||||    
T  14787292 tttttgaagaagctaaactaacccacttaaattgatattagagagaatcgaacctga 14787348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 16019429 - 16019385
Alignment:
Q  186 agaagctaaattatcccacctaaattgacatcgaagagaatcgaa 230  Q
    ||||||||||||||||||| ||||||||||||  ||| |||||||    
T  16019429 agaagctaaattatcccacttaaattgacatctgagataatcgaa 16019385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 51814605 - 51814557
Alignment:
Q  188 aagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| |||||| |||||| || || |||||||||||||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgag 51814557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 41589 - 41646
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||| ||||||||| |||||| |||||||||||  ||||||| |||||||||    
T  41589 tttttgaagaggctaaattagcccacccaaattgacatcagagagaattgaacctgag 41646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 44063 - 44114
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaa 230  Q
    ||||| ||||||||||||||||||||  ||||||||| |||||| |||||||    
T  44063 ttttttaagaagctaaattatcccactcaaattgacaccgaagaaaatcgaa 44114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 42621 - 42677
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    ||||||||||| ||||||| |||||||||||||||| |  |||||||||||| ||||    
T  42621 ttttgaagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgag 42677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 49426 - 49370
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| |||||| ||||||| ||||| |||||||||| || ||||||||||||||||    
T  49426 ttttttaagaagttaaattaacccacttaaattgacaccggagagaatcgaacctga 49370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 42477 - 42533
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||||||||||||||||| ||| | ||||||| || | ||||||||||||||||||    
T  42477 tttttgaagaagctaaattaaccc-cttaaattggcaccaaagagaatcgaacctgag 42533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 112401 - 112348
Alignment:
Q  180 ttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacct 233  Q
    |||| ||||||||||||||  |||||||||||| || || ||||||||||||||    
T  112401 tttttaagaagctaaattagtccacctaaattggcaccggagagaatcgaacct 112348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 13023 - 13059
Alignment:
Q  200 cccacctaaattgacatcgaagagaatcgaacctgag 236  Q
    |||||| |||||||||||| |||||||||||||||||    
T  13023 cccacccaaattgacatcggagagaatcgaacctgag 13059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 156945 - 157001
Alignment:
Q  179 tttttgaagaagctaaattatcccacctaaattgacatcgaagagaatcgaacctga 235  Q
    ||||| || ||||||||||| |||||  ||||||||| |||||| ||||||||||||    
T  156945 ttttttaaaaagctaaattagcccactcaaattgacaccgaagaaaatcgaacctga 157001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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