View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0453_low_2 (Length: 413)
Name: NF0453_low_2
Description: NF0453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0453_low_2 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 30 - 413
Target Start/End: Original strand, 42070500 - 42070883
Alignment:
| Q |
30 |
gaacctacacaaccaaattgaaatcaataacatgttaattaataacaatttacaaccattgtatgttatatacttgttaataagttatgaaggcagatat |
129 |
Q |
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| T |
42070500 |
gaacctacacaaccaaattgaaatcaataacatgttaattaataacaatttacaaccattgtatgttatatacttattaataagttatgaaggcagatat |
42070599 |
T |
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| Q |
130 |
tagacgcaagactaatattgacgcgtcaacactgattataatttatcaaaaagaataatgtaatgtatctacattatgtcggataccagacatgccttca |
229 |
Q |
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| T |
42070600 |
tagacgcaagactaatattgacgcgtcaacactgattataatttatcaaaaagaataatgtaatgtatctacattatgtcggataccagacatgccttca |
42070699 |
T |
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| Q |
230 |
ggtgaaagtgtcgtgctacgaaagtaacaataacaatagagataagtttttgtgtatacccttgattttaagcattcccaatcatcaacaacaggtaggc |
329 |
Q |
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||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
42070700 |
ggtgaaagtgtcgtgctacaaaagtaataataacaatagagataagtttttgtgtatacccttgattttaagcattcccaatcatcaacaagaggtaggc |
42070799 |
T |
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| Q |
330 |
cagtcgctcttacggcctgtagaactgaagaaccttttgttggaccaaacagtaaaactccaatcaattccacactaccatcta |
413 |
Q |
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| T |
42070800 |
cagtcgctcttacggcctgtagaactgaagaaccttttgttggaccaaacagtaaaactccaatcaattccacactaccatcta |
42070883 |
T |
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