View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0455_high_29 (Length: 242)

Name: NF0455_high_29
Description: NF0455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0455_high_29
NF0455_high_29
[»] chr7 (60 HSPs)
chr7 (81-223)||(23101387-23101529)
chr7 (81-223)||(28342436-28342578)
chr7 (81-223)||(29614733-29614875)
chr7 (85-222)||(39784189-39784326)
chr7 (81-223)||(3023015-3023157)
chr7 (81-223)||(18838478-18838620)
chr7 (81-223)||(28034774-28034916)
chr7 (87-223)||(7993231-7993367)
chr7 (81-223)||(9882206-9882347)
chr7 (81-222)||(33382727-33382868)
chr7 (81-223)||(37972836-37972978)
chr7 (81-215)||(41827401-41827535)
chr7 (81-218)||(8675427-8675563)
chr7 (81-223)||(509745-509877)
chr7 (81-223)||(44121879-44122011)
chr7 (81-223)||(12740462-12740603)
chr7 (81-223)||(44256735-44256877)
chr7 (87-223)||(40460692-40460818)
chr7 (106-223)||(973280-973397)
chr7 (94-223)||(43187339-43187468)
chr7 (106-223)||(47914362-47914479)
chr7 (91-223)||(29585603-29585725)
chr7 (106-223)||(34695369-34695486)
chr7 (106-223)||(7718356-7718473)
chr7 (106-223)||(7719254-7719371)
chr7 (106-223)||(30440892-30441009)
chr7 (87-223)||(37328016-37328142)
chr7 (106-223)||(40996643-40996760)
chr7 (118-223)||(43581096-43581201)
chr7 (106-223)||(44343390-44343507)
chr7 (87-223)||(46405416-46405542)
chr7 (81-223)||(39028186-39028318)
chr7 (97-223)||(12963790-12963911)
chr7 (106-223)||(12893504-12893621)
chr7 (106-223)||(18914729-18914846)
chr7 (106-223)||(32142911-32143028)
chr7 (106-223)||(47879264-47879381)
chr7 (97-223)||(10068556-10068682)
chr7 (118-223)||(20275269-20275374)
chr7 (146-223)||(32883871-32883948)
chr7 (106-211)||(39219371-39219476)
chr7 (106-223)||(7113548-7113665)
chr7 (106-175)||(17001037-17001106)
chr7 (106-223)||(34009109-34009226)
chr7 (169-223)||(10676477-10676531)
chr7 (157-223)||(43679510-43679576)
chr7 (179-223)||(19251628-19251672)
chr7 (115-175)||(47066821-47066881)
chr7 (121-173)||(33892269-33892321)
chr7 (169-223)||(25805781-25805835)
chr7 (89-135)||(32883944-32883990)
chr7 (105-186)||(19810915-19810996)
chr7 (179-223)||(31638971-31639015)
chr7 (188-223)||(17001099-17001134)
chr7 (81-124)||(29893173-29893216)
chr7 (188-223)||(47066793-47066828)
chr7 (182-223)||(447872-447913)
chr7 (106-222)||(9179970-9180076)
chr7 (184-222)||(3797129-3797167)
chr7 (97-206)||(10617024-10617134)
[»] chr4 (63 HSPs)
chr4 (81-223)||(5441498-5441640)
chr4 (81-223)||(27768150-27768292)
chr4 (81-223)||(37828372-37828514)
chr4 (81-223)||(54341238-54341380)
chr4 (81-223)||(48261221-48261363)
chr4 (91-223)||(54853448-54853580)
chr4 (81-223)||(51321015-51321157)
chr4 (87-223)||(37915921-37916057)
chr4 (93-223)||(32322185-32322315)
chr4 (81-223)||(23987308-23987440)
chr4 (81-223)||(41725219-41725355)
chr4 (81-223)||(30967279-30967411)
chr4 (97-205)||(8711978-8712086)
chr4 (106-223)||(41881077-41881194)
chr4 (91-175)||(32683988-32684072)
chr4 (82-223)||(44770826-44770965)
chr4 (81-223)||(49501489-49501623)
chr4 (81-223)||(49507554-49507688)
chr4 (81-175)||(49834803-49834897)
chr4 (109-223)||(55302937-55303051)
chr4 (106-223)||(12113039-12113156)
chr4 (106-223)||(25331225-25331342)
chr4 (106-222)||(34228578-34228694)
chr4 (106-205)||(24736447-24736546)
chr4 (82-223)||(5800072-5800203)
chr4 (118-223)||(3436687-3436792)
chr4 (106-223)||(32950831-32950948)
chr4 (106-223)||(39479350-39479467)
chr4 (106-223)||(41320904-41321021)
chr4 (81-223)||(28483993-28484123)
chr4 (106-223)||(24130976-24131094)
chr4 (106-223)||(37046445-37046563)
chr4 (118-219)||(1044905-1045006)
chr4 (106-223)||(1112987-1113104)
chr4 (106-223)||(7007468-7007585)
chr4 (106-211)||(30009672-30009777)
chr4 (106-223)||(42786778-42786895)
chr4 (132-223)||(19740929-19741020)
chr4 (109-223)||(50018345-50018449)
chr4 (118-222)||(22202110-22202214)
chr4 (97-223)||(36479228-36479343)
chr4 (157-223)||(7249811-7249877)
chr4 (94-223)||(12913318-12913437)
chr4 (81-223)||(20021427-20021569)
chr4 (140-223)||(25446144-25446227)
chr4 (157-223)||(9163170-9163236)
chr4 (169-223)||(25504697-25504751)
chr4 (106-223)||(46635643-46635754)
chr4 (106-223)||(56445350-56445457)
chr4 (179-223)||(29649735-29649779)
chr4 (164-223)||(23465049-23465108)
chr4 (148-223)||(28371018-28371093)
chr4 (157-223)||(28541792-28541858)
chr4 (106-223)||(31314737-31314844)
chr4 (106-223)||(27454073-27454190)
chr4 (131-223)||(53275933-53276025)
chr4 (188-223)||(32684065-32684100)
chr4 (98-185)||(36727937-36728023)
chr4 (188-223)||(49834890-49834925)
chr4 (118-223)||(39307260-39307365)
chr4 (179-222)||(40537218-40537261)
chr4 (101-175)||(40537150-40537224)
chr4 (101-186)||(11090435-11090520)
[»] chr1 (42 HSPs)
chr1 (81-223)||(6312662-6312804)
chr1 (81-223)||(51701668-51701810)
chr1 (81-223)||(9322470-9322612)
chr1 (81-223)||(25612245-25612387)
chr1 (81-223)||(29396358-29396500)
chr1 (81-223)||(15835023-15835165)
chr1 (91-223)||(48177442-48177574)
chr1 (81-223)||(28387363-28387505)
chr1 (81-223)||(46328130-46328272)
chr1 (87-223)||(38536075-38536201)
chr1 (87-223)||(38558293-38558419)
chr1 (97-223)||(9577418-9577544)
chr1 (118-222)||(35279761-35279865)
chr1 (94-215)||(29219382-29219493)
chr1 (91-175)||(18798607-18798691)
chr1 (108-223)||(35679125-35679240)
chr1 (109-223)||(21222235-21222349)
chr1 (106-223)||(6304247-6304364)
chr1 (106-223)||(19451803-19451920)
chr1 (106-223)||(49198264-49198381)
chr1 (118-222)||(31572204-31572308)
chr1 (106-214)||(47780808-47780916)
chr1 (96-223)||(48668770-48668887)
chr1 (81-186)||(45272700-45272805)
chr1 (106-223)||(50192545-50192662)
chr1 (106-223)||(45760004-45760121)
chr1 (106-223)||(47654346-47654463)
chr1 (106-223)||(29556192-29556310)
chr1 (121-223)||(32588963-32589065)
chr1 (106-223)||(28824368-28824484)
chr1 (106-223)||(37014635-37014752)
chr1 (118-223)||(49418172-49418277)
chr1 (131-223)||(45536032-45536124)
chr1 (122-186)||(5495117-5495181)
chr1 (140-223)||(48524407-48524490)
chr1 (188-223)||(18798579-18798614)
chr1 (157-223)||(730237-730303)
chr1 (179-223)||(955838-955882)
chr1 (179-223)||(43885158-43885202)
chr1 (189-223)||(49230974-49231008)
chr1 (169-223)||(51085883-51085937)
chr1 (118-150)||(33025664-33025696)
[»] chr8 (36 HSPs)
chr8 (81-223)||(14782104-14782246)
chr8 (81-223)||(44725779-44725921)
chr8 (81-223)||(39467437-39467579)
chr8 (91-223)||(9288436-9288568)
chr8 (82-223)||(43166660-43166801)
chr8 (87-223)||(19717856-19717992)
chr8 (91-223)||(18958706-18958838)
chr8 (81-223)||(26856162-26856304)
chr8 (91-223)||(4403202-4403334)
chr8 (93-223)||(10295360-10295492)
chr8 (81-223)||(18305940-18306072)
chr8 (81-186)||(7466457-7466562)
chr8 (89-223)||(32497620-32497744)
chr8 (91-223)||(37857214-37857336)
chr8 (93-223)||(16362291-16362411)
chr8 (106-223)||(24501807-24501924)
chr8 (106-223)||(26374424-26374541)
chr8 (91-223)||(42305774-42305896)
chr8 (106-223)||(42937446-42937563)
chr8 (106-223)||(42938111-42938228)
chr8 (93-175)||(31623818-31623900)
chr8 (106-223)||(7506893-7507010)
chr8 (94-223)||(39189798-39189925)
chr8 (121-223)||(10392246-10392348)
chr8 (106-223)||(2704813-2704930)
chr8 (106-223)||(5576614-5576731)
chr8 (106-223)||(42735271-42735388)
chr8 (106-223)||(23115163-23115280)
chr8 (128-175)||(4031294-4031341)
chr8 (169-222)||(8410455-8410508)
chr8 (188-223)||(4031334-4031369)
chr8 (188-223)||(31623790-31623825)
chr8 (106-211)||(4950010-4950115)
chr8 (169-222)||(13478307-13478360)
chr8 (179-223)||(43959752-43959796)
chr8 (106-184)||(41479221-41479299)
[»] chr6 (16 HSPs)
chr6 (81-223)||(31895790-31895932)
chr6 (91-222)||(14262412-14262543)
chr6 (87-223)||(34759025-34759161)
chr6 (87-223)||(7497170-7497305)
chr6 (81-223)||(4200406-4200538)
chr6 (81-223)||(31067587-31067719)
chr6 (118-223)||(34773503-34773608)
chr6 (81-223)||(30385038-30385168)
chr6 (106-223)||(6197472-6197589)
chr6 (118-223)||(2300744-2300849)
chr6 (106-223)||(1391718-1391835)
chr6 (106-223)||(29076693-29076810)
chr6 (106-223)||(29111667-29111784)
chr6 (118-223)||(7051939-7052044)
chr6 (126-223)||(28002759-28002856)
chr6 (106-150)||(2238678-2238722)
[»] chr5 (23 HSPs)
chr5 (81-223)||(14000074-14000216)
chr5 (81-223)||(39852440-39852582)
chr5 (81-223)||(1152072-1152214)
chr5 (81-223)||(13926026-13926168)
chr5 (81-223)||(7947542-7947684)
chr5 (101-223)||(4550246-4550368)
chr5 (83-223)||(4240433-4240563)
chr5 (87-223)||(5949203-5949329)
chr5 (89-223)||(1461125-1461249)
chr5 (87-223)||(40013687-40013813)
chr5 (106-223)||(21147162-21147279)
chr5 (106-223)||(33656035-33656152)
chr5 (88-175)||(37014037-37014124)
chr5 (118-223)||(7016745-7016850)
chr5 (118-223)||(5272925-5273030)
chr5 (106-223)||(22746392-22746501)
chr5 (109-223)||(32157891-32158008)
chr5 (106-220)||(27458944-27459058)
chr5 (118-223)||(139368-139473)
chr5 (131-223)||(849242-849334)
chr5 (106-222)||(9689753-9689869)
chr5 (157-223)||(6460887-6460953)
chr5 (164-223)||(14465279-14465338)
[»] chr3 (59 HSPs)
chr3 (81-223)||(36674100-36674242)
chr3 (81-223)||(18749706-18749848)
chr3 (81-223)||(32580270-32580412)
chr3 (81-223)||(17946382-17946524)
chr3 (81-223)||(34484000-34484142)
chr3 (81-223)||(44906483-44906625)
chr3 (93-222)||(11431621-11431750)
chr3 (81-223)||(54628938-54629080)
chr3 (81-223)||(26107355-26107497)
chr3 (81-223)||(48379251-48379393)
chr3 (87-223)||(40897238-40897375)
chr3 (81-223)||(31646256-31646396)
chr3 (81-223)||(52617941-52618077)
chr3 (81-223)||(52810472-52810614)
chr3 (81-223)||(51737697-51737838)
chr3 (104-215)||(50903233-50903344)
chr3 (89-223)||(10728629-10728753)
chr3 (87-223)||(39038134-39038260)
chr3 (89-221)||(50762038-50762160)
chr3 (106-223)||(3206200-3206317)
chr3 (93-223)||(37454955-37455075)
chr3 (81-175)||(23753377-23753470)
chr3 (106-223)||(996081-996198)
chr3 (106-223)||(10139141-10139258)
chr3 (106-223)||(19253921-19254038)
chr3 (106-223)||(20498303-20498420)
chr3 (81-223)||(39842464-39842596)
chr3 (97-223)||(6035039-6035165)
chr3 (109-223)||(33807796-33807910)
chr3 (106-223)||(3999640-3999757)
chr3 (106-223)||(37820472-37820589)
chr3 (106-219)||(44762032-44762145)
chr3 (98-175)||(45862983-45863060)
chr3 (106-223)||(54625686-54625803)
chr3 (106-223)||(5825156-5825273)
chr3 (106-223)||(6589658-6589775)
chr3 (122-215)||(20833094-20833187)
chr3 (106-223)||(29448853-29448970)
chr3 (106-223)||(40246938-40247055)
chr3 (121-223)||(35337829-35337930)
chr3 (118-223)||(33996548-33996653)
chr3 (81-137)||(10660691-10660747)
chr3 (106-223)||(25418460-25418577)
chr3 (106-222)||(1439889-1440005)
chr3 (106-194)||(6131228-6131316)
chr3 (81-186)||(15492836-15492942)
chr3 (179-223)||(10660629-10660673)
chr3 (94-186)||(44276506-44276598)
chr3 (106-222)||(53929123-53929239)
chr3 (169-223)||(1440010-1440064)
chr3 (157-223)||(22057856-22057922)
chr3 (126-223)||(51699495-51699592)
chr3 (118-223)||(52114623-52114728)
chr3 (183-223)||(539476-539516)
chr3 (179-223)||(55235278-55235322)
chr3 (188-223)||(23753463-23753498)
chr3 (169-223)||(29030099-29030153)
chr3 (106-184)||(27899467-27899545)
chr3 (109-150)||(33807678-33807719)
[»] scaffold0543 (1 HSPs)
scaffold0543 (81-223)||(10655-10797)
[»] chr2 (35 HSPs)
chr2 (85-223)||(18177363-18177501)
chr2 (81-223)||(26788882-26789021)
chr2 (81-223)||(10657502-10657644)
chr2 (89-223)||(25288255-25288389)
chr2 (81-223)||(28844651-28844793)
chr2 (81-223)||(33135719-33135860)
chr2 (81-223)||(43078659-43078801)
chr2 (87-219)||(3463772-3463894)
chr2 (91-223)||(28740275-28740397)
chr2 (81-223)||(13833404-13833536)
chr2 (81-175)||(6224539-6224633)
chr2 (106-223)||(12407476-12407593)
chr2 (106-223)||(16269787-16269904)
chr2 (106-223)||(24776451-24776568)
chr2 (106-222)||(20605333-20605449)
chr2 (81-223)||(379033-379165)
chr2 (81-152)||(7027054-7027125)
chr2 (81-175)||(215210-215303)
chr2 (106-223)||(14198574-14198691)
chr2 (106-223)||(31170621-31170738)
chr2 (118-223)||(32125349-32125454)
chr2 (106-223)||(35317158-35317275)
chr2 (106-223)||(5093044-5093161)
chr2 (106-223)||(22551760-22551877)
chr2 (106-223)||(43847742-43847859)
chr2 (106-214)||(9120231-9120339)
chr2 (81-223)||(10125271-10125404)
chr2 (108-223)||(305464-305579)
chr2 (131-223)||(1789538-1789630)
chr2 (179-223)||(7026700-7026744)
chr2 (97-175)||(3574971-3575049)
chr2 (157-223)||(44765871-44765937)
chr2 (188-223)||(3574943-3574978)
chr2 (188-223)||(6224626-6224661)
chr2 (138-175)||(7026738-7026775)
[»] scaffold0110 (1 HSPs)
scaffold0110 (81-223)||(39587-39729)
[»] scaffold0042 (1 HSPs)
scaffold0042 (81-223)||(58046-58188)
[»] scaffold0054 (1 HSPs)
scaffold0054 (81-222)||(36880-37018)
[»] scaffold0839 (1 HSPs)
scaffold0839 (81-217)||(3662-3798)
[»] scaffold1504 (1 HSPs)
scaffold1504 (81-223)||(959-1097)
[»] scaffold0347 (1 HSPs)
scaffold0347 (87-186)||(14892-14991)
[»] scaffold0306 (1 HSPs)
scaffold0306 (81-223)||(13977-14109)
[»] scaffold0152 (2 HSPs)
scaffold0152 (81-223)||(21218-21350)
scaffold0152 (81-206)||(28463-28579)
[»] scaffold0400 (1 HSPs)
scaffold0400 (106-223)||(15028-15145)
[»] scaffold0365 (1 HSPs)
scaffold0365 (106-223)||(15671-15788)
[»] scaffold0151 (1 HSPs)
scaffold0151 (106-223)||(38600-38716)
[»] scaffold0037 (1 HSPs)
scaffold0037 (118-223)||(100306-100411)
[»] scaffold0004 (1 HSPs)
scaffold0004 (106-223)||(102190-102307)
[»] scaffold0113 (1 HSPs)
scaffold0113 (106-223)||(38890-39007)
[»] scaffold0276 (1 HSPs)
scaffold0276 (101-223)||(529-651)
[»] scaffold0922 (1 HSPs)
scaffold0922 (181-223)||(4295-4337)
[»] scaffold0007 (1 HSPs)
scaffold0007 (163-223)||(199920-199980)


Alignment Details
Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 23101529 - 23101387
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  23101529 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 23101430  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23101429 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 23101387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 28342578 - 28342436
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  28342578 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 28342479  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28342478 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 28342436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 29614733 - 29614875
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  29614733 agaaaaagatagtaacttttaaaataaaaataatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 29614832  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29614833 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 29614875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 39784326 - 39784189
Alignment:
Q  85 aaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  39784326 aaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 39784227  T
Q  185 catcaaaatccaatttattaaacaatccttcgaaattt 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39784226 catcaaaatccaatttattaaacaatccttcgaaattt 39784189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 3023157 - 3023015
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| ||    
T  3023157 agaaagagatactaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaa 3023058  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3023057 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 3023015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 18838620 - 18838478
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| ||    
T  18838620 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaa 18838521  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  18838520 aatccatcaaaatccaatttattaaacaatctttcgaaatttg 18838478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 28034774 - 28034916
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| ||    
T  28034774 agaaagagatagtaacttgtaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaa 28034873  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  28034874 aatccatcaaaatccaatttattaaacaatcctttgaaatttg 28034916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 7993367 - 7993231
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||    
T  7993367 agatagtaacttttaaaagaaaaacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatcca 7993268  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7993267 tcaaaattcaatttattaaacaatccttcgaaatttg 7993231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 9882206 - 9882347
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||    
T  9882206 agaaagagataataacttttaaaagaaaaacaatctcaagaaatctcatttttt-atgaaagactttttcttcttaaaattacactacaaaatcccacaa 9882304  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  9882305 aatccatcaaaatccaatttattaaacaatcattcgaaatttg 9882347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 33382868 - 33382727
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||| |||||||| ||||||||||| || ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||    
T  33382868 agaaagagatagtaaattttaaaagaaaaacaatctaaataaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaa 33382769  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaattt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33382768 aatccatcaaaatccaatttattaaacaatccttcgaaattt 33382727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 37972836 - 37972978
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||||||  ||    
T  37972836 agaaagagataataacttttaaaagaaaaacaatctcaagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaa 37972935  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  37972936 aatccatcaaaatccaatttattaaataatccttcgaaatttg 37972978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 41827535 - 41827401
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||| ||||||| ||    
T  41827535 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaa 41827436  T
Q  181 aatccatcaaaatccaatttattaaacaatccttc 215  Q
    |||||||||||||||||||||||||||||||||||    
T  41827435 aatccatcaaaatccaatttattaaacaatccttc 41827401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 8675563 - 8675427
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||| ||    
T  8675563 agaaatagatagtaacttt-aaaagaaaaacaatctcaagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaa 8675465  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8675464 aatccatcaaaatccaatttattaaacaatccttcgaa 8675427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 509877 - 509745
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||||             
T  509877 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaatcccactacaaa--------- 509787  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
     |||||||||||||||||||||||||||||| |||||||||||    
T  509786 -atccatcaaaatccaatttattaaacaatcgttcgaaatttg 509745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 44121879 - 44122011
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||          ||    
T  44121879 agaaagagatagtaacttttaaaagaaaaacaatctcaaaaaatctcatcttttcattaaagactttttcttgttaaaattacactac----------aa 44121968  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44121969 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 44122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 12740603 - 12740462
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||| ||||||||||||||  |||||||||| ||||||||||||||||| |||||||||||| |||| || ||||||||||| ||||||||| ||    
T  12740603 agaaagagacagtaacttttaaaagtaaaacaatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaa 12740504  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| |||||||||| |||||||||||||||||| ||||||||    
T  12740503 aatctatcaaaatcc-atttattaaacaatcctttgaaatttg 12740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 44256735 - 44256877
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| |||||||||||||| ||||||||| |||| |||||| |||||||||| || |||||||||| |||||||| | ||    
T  44256735 agaaagagataataacttttaaaagaaaaacaatctcaaaaaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaa 44256834  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||| |||| |||||||||||||||||||||| |||||||||||    
T  44256835 aattcatccaaatccaatttattaaacaatcattcgaaatttg 44256877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 40460692 - 40460818
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||          ||||||||    
T  40460692 agatagtaacttttaaaagaaaaacaatctcaagaaatctcatattttcatgaaagattttttcttgttaaaattacactac----------aaaatcca 40460781  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||| |||||||||||    
T  40460782 tcaaaatccaatttattaaacaatcattcgaaatttg 40460818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 973397 - 973280
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  973397 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 973298  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  973297 acaatccttcgaaatttg 973280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 43187339 - 43187468
Alignment:
Q  94 aacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaat 193  Q
    ||||||||||| |||||||||| ||| ||||||||| | |||||||||||||||||||| || ||||| ||||| ||||||| | ||||| |||||||||    
T  43187339 aacttttaaaagaaaaacaatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaat 43187438  T
Q  194 ccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||| |||| |||||||    
T  43187439 ccaatttattaaacaatgcttcaaaatttg 43187468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 47914479 - 47914362
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  47914479 aaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaa 47914380  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  47914379 acaatccttcgaaatttg 47914362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 29585725 - 29585603
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||          |||||||||    
T  29585725 agtaacttttaaaagaaaaacaatctcaagaaatttcatctttttatgaaagactttttcttgttaaaattacactacaaa----------atccatcaa 29585636  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||| ||||||||||||||||| |||||||    
T  29585635 aatccaaattattaaacaatccttcaaaatttg 29585603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 34695486 - 34695369
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  34695486 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 34695387  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  34695386 acaatccttcgaaatttg 34695369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 7718356 - 7718473
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  7718356 aaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 7718455  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  7718456 acaatccttcgaaatttg 7718473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 7719254 - 7719371
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  7719254 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 7719353  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| |||||||||||    
T  7719354 acaatcattcgaaatttg 7719371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 30441009 - 30440892
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||| ||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  30441009 aaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 30440910  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  30440909 acaatccttcgaaatttg 30440892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 37328142 - 37328016
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| || || |||||| ||||||||          |||||    
T  37328142 agatagtaacttttaaaagaaaaacaatctcaaaaaatcttatcttttcatgaaagacttttttttgttaaaattatactacaaa----------atcca 37328053  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  37328052 tcaaaattcaatttattaaacaatcctttgaaatttg 37328016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 40996643 - 40996760
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||| | ||||||||||||||||  |||||||||    
T  40996643 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaa 40996742  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  40996743 acaatccttcgaaatttg 40996760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 43581096 - 43581201
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  43581096 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 43581195  T
Q  218 aatttg 223  Q
    ||||||    
T  43581196 aatttg 43581201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 44343390 - 44343507
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||| |||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  44343390 aaaaacaatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 44343489  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  44343490 acaatccttcgaaatttg 44343507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 46405416 - 46405542
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||| || ||||||||          ||| ||||||||    
T  46405416 agatagtaacttttaaaagaaaaacaatctcaagaaatctcatctttttattaaatactttttcttgttaaaattaca----------ccacaaaatcca 46405505  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||| || ||||||||    
T  46405506 tcaaaatccaatttattaaacaatcatttgaaatttg 46405542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 39028318 - 39028186
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||   ||||||||||| |||||||||| || || ||||||||||||             
T  39028318 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctctgtttttcatgaaaaactttttcttgttaaagttacactacaaa--------- 39028228  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
     |||||||||||||||||||||||||||||| |||| ||||||    
T  39028227 -atccatcaaaatccaatttattaaacaatctttcgtaatttg 39028186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 12963911 - 12963790
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcca 196  Q
    |||||||| ||||||||||||||||||||||||      |  ||||||||||||||  | ||||| ||||| ||||||||| |||||||||||||||| |    
T  12963911 ttttaaaagaaaaacaatctcaagaaatctcatg-----aaaaaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatcta 12963817  T
Q  197 atttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||    
T  12963816 atttattaaacaatccttcgaaatttg 12963790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 12893621 - 12893504
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| |||||| || ||||||||||||||||  |||||||||    
T  12893621 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaa 12893522  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||| ||||||||||||    
T  12893521 acaattcttcgaaatttg 12893504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 18914729 - 18914846
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  18914729 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 18914828  T
Q  206 acaatccttcgaaatttg 223  Q
    |||| |||| ||||||||    
T  18914829 acaaacctttgaaatttg 18914846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 32142911 - 32143028
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||| ||| ||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  32142911 aaaaacaatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 32143010  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  32143011 acaatccttcaaaatttg 32143028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 47879381 - 47879264
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||| ||| ||||||||||||||||  |||||||||    
T  47879381 aaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaa 47879282  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||  |||||||    
T  47879281 acaatccttttaaatttg 47879264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 10068682 - 10068556
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcca 196  Q
    |||||||| ||||||||||  || ||||||||| |||| |||||| |||||||| |  | ||||| ||||| ||||||||| |||||||||||||||  |    
T  10068682 ttttaaaagaaaaacaatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattta 10068583  T
Q  197 atttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||| |||||||    
T  10068582 atttattaaacaatccttcaaaatttg 10068556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 20275269 - 20275374
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||||||  |||||||| |||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  20275269 aagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 20275368  T
Q  218 aatttg 223  Q
    ||||||    
T  20275369 aatttg 20275374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 32883948 - 32883871
Alignment:
Q  146 ttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||| || |||||||||||||||||||||  |||||||||||||||||||||| ||||||||| |||||||||||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttg 32883871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 39219371 - 39219476
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  39219371 aaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 39219470  T
Q  206 acaatc 211  Q
    ||||||    
T  39219471 acaatc 39219476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 7113665 - 7113548
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||| |||| |||||||||||||||||||| |  | |||||   ||| ||||||||| |||||| |||||||||  |||||||||    
T  7113665 aaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatctatcaaaatctgatttattaa 7113566  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||| |||||||||    
T  7113565 acaatcctgcgaaatttg 7113548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 17001037 - 17001106
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||    
T  17001037 aaaaacaatatcaagaaatctcatattttcatgaaagactttttcttgttataattacactacaaaatcc 17001106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 34009226 - 34009109
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||| |||||||||||||  |  | |||||  | || ||||| ||| ||||||||||||||||  |||||||||    
T  34009226 aaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatccatcaaaatctgatttattaa 34009127  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  34009126 acaatccttcgaaatttg 34009109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 10676477 - 10676531
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10676477 aaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttg 10676531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 43679576 - 43679510
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  43679576 aaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttg 43679510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 19251672 - 19251628
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19251672 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 19251628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 47066881 - 47066821
Alignment:
Q  115 ctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||    
T  47066881 ctcaagaaatctcatcttttcatgaaatattttttcttgttaaaattacactacaaaatcc 47066821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 33892269 - 33892321
Alignment:
Q  121 aaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaat 173  Q
    |||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  33892269 aaatctcatcttttaatgaaagactttttcttgttaaaattacactacaaaat 33892321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 25805835 - 25805781
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||| |||||||||    
T  25805835 aaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttg 25805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 32883990 - 32883944
Alignment:
Q  89 atagtaacttttaaaataaaaacaatctcaagaaatctcatcttttc 135  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||    
T  32883990 atagtaacttttaaaagaaaaacaatctcaataaatctcatcttttc 32883944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 19810996 - 19810915
Alignment:
Q  105 taaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||  |  | ||||| ||||| ||||| ||| ||||||||    
T  19810996 taaaaacaatctcaagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca 19810915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 31639015 - 31638971
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttg 31638971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 17001099 - 17001134
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttg 17001134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 29893216 - 29893173
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaat 124  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  29893216 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaat 29893173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 47066828 - 47066793
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttg 47066793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 447913 - 447872
Alignment:
Q  182 atccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttg 447872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 9180076 - 9179970
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||  |  | ||| | ||||| |||||||||          ||||||||||||||||||    
T  9180076 aaaaacaatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatccca----------caaaatccaatttattaa 9179987  T
Q  206 acaatccttcgaaattt 222  Q
    ||||||||||| |||||    
T  9179986 acaatccttcggaattt 9179970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 3797129 - 3797167
Alignment:
Q  184 ccatcaaaatccaatttattaaacaatccttcgaaattt 222  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  3797129 ccatcaaaatctaatttattaaacaatccttcaaaattt 3797167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 10617134 - 10617024
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctc-atcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcc 195  Q
    |||||||| |||| ||||| ||| ||||||  || |||| ||||||||||| || ||  | ||||  ||||| |||||| || ||||||||||||||||     
T  10617134 ttttaaaagaaaagcaatcccaaaaaatctttatgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatccatcaaaatct 10617035  T
Q  196 aatttattaaa 206  Q
    |||||||||||    
T  10617034 aatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 5441640 - 5441498
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  5441640 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 5441541  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5441540 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 5441498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 27768292 - 27768150
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  27768292 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 27768193  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27768192 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 27768150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 37828372 - 37828514
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  37828372 agaaaaagatagtaatttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaa 37828471  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37828472 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 37828514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 54341380 - 54341238
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  54341380 agaaaaaaatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 54341281  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  54341280 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 54341238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 48261363 - 48261221
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||||||||||| ||    
T  48261363 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaa 48261264  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  48261263 aatccatcaaaatccaatttattaaacaatccttcaaaatttg 48261221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 54853448 - 54853580
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||    
T  54853448 agtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaa 54853547  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||| ||||||||    
T  54853548 aatccaatttattaaacaatcctttgaaatttg 54853580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 51321157 - 51321015
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||  || ||    
T  51321157 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaa 51321058  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51321057 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 51321015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 37916057 - 37915921
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||| || ||| ||||||||||||||||| ||||||||    
T  37916057 agatagtaacttttaaaagaaaaacaatctcaataaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatcca 37915958  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||    
T  37915957 tcaaaatccaatttattaaacaatccttcgaaatttg 37915921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 32322315 - 32322185
Alignment:
Q  93 taacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaa 192  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||||||||||||||| ||||||||||||||    
T  32322315 taactattaaaagaaaaacaatctcaagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaa 32322216  T
Q  193 tccaatttattaaacaatccttcgaaatttg 223  Q
    | |||||||||||||||||||||||||||||    
T  32322215 ttcaatttattaaacaatccttcgaaatttg 32322185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 23987440 - 23987308
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||             
T  23987440 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaa--------- 23987350  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
     ||||||||||||| ||||||||||||||||||||||||||||    
T  23987349 -atccatcaaaatctaatttattaaacaatccttcgaaatttg 23987308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 41725355 - 41725219
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||| ||    
T  41725355 agaaaaagatagtaacttttaaaataaaaccaa---caagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaa 41725259  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||| ||||||||||||||   |||||||||||||| |||||||    
T  41725258 aattcatcaaaatccaat---ttaaacaatccttcaaaatttg 41725219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 30967279 - 30967411
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||| || |||||||||||||||||||||       
T  30967279 agaaagagatagtaacttttaaaaaaaaaacaatctcaagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatccca--- 30967375  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
           ||||||||||||||||||||||||||| ||||||||    
T  30967376 -------caaaatccaatttattaaacaatcctttgaaatttg 30967411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 8712086 - 8711978
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcca 196  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||  | ||||| ||||| ||||||||| ||||||||||||||||||    
T  8712086 ttttaaaagaaaaacaatctcaagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatccatcaaaatcca 8711987  T
Q  197 atttattaa 205  Q
    |||||||||    
T  8711986 atttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 41881077 - 41881194
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  41881077 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 41881176  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  41881177 acaatccttcgaaatttg 41881194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 32683988 - 32684072
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  32683988 agtaacttttaaaagaaaaacaatctcaataaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 32684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 44770826 - 44770965
Alignment:
Q  82 gaaaaagatagtaa-cttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||| ||||||||| ||||||||| |||| |||| |   |||||||||| |  |||||||||||||||||||||| ||||| ||||| ||||||||| ||    
T  44770826 gaaagagatagtaaacttttaaaagaaaagcaatat---gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaa 44770922  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  44770923 aatccaccaaaatccaatttattaaacaatccttcaaaatttg 44770965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 49501489 - 49501623
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatctttt--catgaaagactttttcttcttgaaattacactacaaaatcccat 178  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||| || ||||||||||||||||| |||     
T  49501489 agaaagagataataacttttaaaagaaaaacaatctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattcca- 49501587  T
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
             |||||||||||||||||||||||| |||||||||||    
T  49501588 ---------caaaatccaatttattaaacaatcattcgaaatttg 49501623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 49507554 - 49507688
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatctttt--catgaaagactttttcttcttgaaattacactacaaaatcccat 178  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||| || ||||||||||||||||| |||     
T  49507554 agaaagagataataacttttaaaagaaaaacaatctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattcca- 49507652  T
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
             |||||||||||||||||||||||| |||||||||||    
T  49507653 ---------caaaatccaatttattaaacaatcattcgaaatttg 49507688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 49834803 - 49834897
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||||    
T  49834803 agaaatagatagtaacttttaatagaaaaacaatctcaagaaatctcatcttttaatgaaagacttcttcttgttaaaattacactacaaaatcc 49834897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 55303051 - 55302937
Alignment:
Q  109 aacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaaca 208  Q
    |||||||| |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| || |||||||||||||  ||||||||||||    
T  55303051 aacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaaca 55302952  T
Q  209 atccttcgaaatttg 223  Q
    |||||||||||||||    
T  55302951 atccttcgaaatttg 55302937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 12113156 - 12113039
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||| ||| ||||||||| ||||||  |||||||||    
T  12113156 aaaaacaatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaa 12113057  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  12113056 acaatccttcgaaatttg 12113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 25331342 - 25331225
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  25331342 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 25331243  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||| ||||||||    
T  25331242 acaatcctttgaaatttg 25331225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 34228578 - 34228694
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||| | ||||||||||||||||  |||||||||    
T  34228578 aaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaa 34228677  T
Q  206 acaatccttcgaaattt 222  Q
    |||||| ||||||||||    
T  34228678 acaatcattcgaaattt 34228694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 24736546 - 24736447
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| || ||||| ||||| |||||| || |||||||||||||||||||||||||||    
T  24736546 aaaaacaatcacaagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 5800203 - 5800072
Alignment:
Q  82 gaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaa 181  Q
    |||| ||||| |||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||| || ||||||| |||||||||| ||        
T  5800203 gaaagagataataacttttaaaagaaaaacaatctcaaaaaatcttatcttttcattaaagactttttcttgttaaaattactctacaaaatctca---- 5800108  T
Q  182 atccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
          ||||||||||||||||||||||||||| ||||||||    
T  5800107 ------caaaatccaatttattaaacaatcctttgaaatttg 5800072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 3436792 - 3436687
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||| || ||||||||||| |||||||| | || ||||| ||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||    
T  3436792 aagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattcatcaaaatctgatttattaaacaatccttcga 3436693  T
Q  218 aatttg 223  Q
    ||||||    
T  3436692 aatttg 3436687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 32950831 - 32950948
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||| ||||| |||||||||||| ||||||||||||| |||||| |  | ||||| ||||| ||||||||| ||||| ||||||||||  |||||||||    
T  32950831 aaaaaaaatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaa 32950930  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  32950931 acaatccttcgaaatttg 32950948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 39479350 - 39479467
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||||||||  ||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  39479350 aaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 39479449  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||| ||||||||||||    
T  39479450 acaattcttcgaaatttg 39479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 41321021 - 41320904
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    |||| |||||| |||||||||||| |||| ||||||||||||||| |  | ||||| ||||| || |||||| ||||||||||||||||  |||||||||    
T  41321021 aaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatcaaaatctgatttattaa 41320922  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  41320921 acaatccttcgaaatttg 41320904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 28484123 - 28483993
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||| |||||||| ||||| ||||| |||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |       
T  28484123 agaaagagatagtaa-ttttaaaagaaaaataatcttaagaaatctcgtcttttcatgaaagactttttcttgtt-aaattacactacaaaatccta--- 28484029  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
           ||||||||||||||||||| ||||||||||||||||    
T  28484028 -------caaaatccaatttattaaataatccttcgaaatttg 28483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 24130976 - 24131094
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagacttttt-cttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttatta 204  Q
    ||||||||||  |||||||||||| ||||||||||||| ||||| | || | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||    
T  24130976 aaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 24131075  T
Q  205 aacaatccttcgaaatttg 223  Q
    ||||||| |||||||||||    
T  24131076 aacaatcattcgaaatttg 24131094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 37046445 - 37046563
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaatta-cactacaaaatcccataaaatccatcaaaatccaatttatta 204  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | |||||  ||||| ||||| ||| ||||||||||||||||  ||||||||    
T  37046445 aaaaacaatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttatta 37046544  T
Q  205 aacaatccttcgaaatttg 223  Q
    |||||||||||||||||||    
T  37046545 aacaatccttcgaaatttg 37046563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 1045006 - 1044905
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||| || |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  1045006 aagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 1044907  T
Q  218 aa 219  Q
    ||    
T  1044906 aa 1044905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 1113104 - 1112987
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| | || |||||  ||||  |||||||| ||||||||||||||||  |||||||||    
T  1113104 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaa 1113005  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| || ||||||||    
T  1113004 acaatcatttgaaatttg 1112987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 7007585 - 7007468
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| ||||||||||| |  ||||| |  | ||||| ||||| ||||||||| ||||| ||||||||||  |||||||||    
T  7007585 aaaaacaatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaa 7007486  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  7007485 acaatccttcgaaatttg 7007468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 30009672 - 30009777
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |  | |||||  |||| ||||||||| ||||||||||||||||  |||||||||    
T  30009672 aaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaa 30009771  T
Q  206 acaatc 211  Q
    ||||||    
T  30009772 acaatc 30009777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 42786895 - 42786778
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||  |  | ||||| ||||| ||||| ||| |||||||||||||||   |||||||||    
T  42786895 aaaaacaatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaa 42786796  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  42786795 acaatccttcgaaatttg 42786778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 19740929 - 19741020
Alignment:
Q  132 tttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||    | ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  19740929 tttcatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttg 19741020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 50018449 - 50018345
Alignment:
Q  109 aacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaaca 208  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||          |||||| ||||| ||||||||||||||    
T  50018449 aacaatctcaataaatctcatcttttcttgaaagactttttcttgttaaaattacactacaaa----------atccattaaaattcaatttattaaaca 50018360  T
Q  209 atccttcgaaatttg 223  Q
    ||||||| |||||||    
T  50018359 atccttcaaaatttg 50018345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 222
Target Start/End: Complemental strand, 22202214 - 22202110
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||| || |||||||||||||||||||| |  | ||||| ||||| ||||||||| |||||||||||||||   ||||||||||||||| || ||    
T  22202214 aagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaatcttttga 22202115  T
Q  218 aattt 222  Q
    |||||    
T  22202114 aattt 22202110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 36479228 - 36479343
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcca 196  Q
    |||||||| ||||| |||||||||||||||||| ||||||| ||||||||||| ||  | ||||| |||||           ||||||||||||||||||    
T  36479228 ttttaaaagaaaaataatctcaagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-----------aaaatccatcaaaatcca 36479316  T
Q  197 atttattaaacaatccttcgaaatttg 223  Q
    |||||||||| ||||||||||||||||    
T  36479317 atttattaaataatccttcgaaatttg 36479343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 7249811 - 7249877
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  7249811 aaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttg 7249877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 223
Target Start/End: Complemental strand, 12913437 - 12913318
Alignment:
Q  94 aacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaat 193  Q
    ||||||||||| ||||| |||  ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| |||||||||          ||||||    
T  12913437 aacttttaaaagaaaaataattccaagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatccca----------caaaat 12913348  T
Q  194 ccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||| |||||||    
T  12913347 ccaatttattaaacaatccttcaaaatttg 12913318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 20021569 - 20021427
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttc-ttgaaattacactacaaaatcccata 179  Q
    ||||| ||||||||||||| |||  ||||  |||| || ||||||| || | ||||||||||| ||||| ||  || ||||| || || |||||||||||    
T  20021569 agaaagagatagtaactttcaaag-aaaagtaatcccatgaaatcttatgtcttcatgaaagattttttttttgttaaaatttcattaaaaaatcccata 20021471  T
Q  180 aaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||| ||||||| |||||||||||||||||||  |||||||    
T  20021470 aaatccagcaaaatctaatttattaaacaatcctttaaaatttg 20021427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 25446227 - 25446144
Alignment:
Q  140 aagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttg 25446144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 9163236 - 9163170
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| ||||| ||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  9163236 aaatttcactagaaaattccacaaaatccatcaaaatttaatttattaaacaatccttcgaaatttg 9163170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 25504697 - 25504751
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  25504697 aaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttg 25504751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 46635643 - 46635754
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||| |  | ||||| ||||| ||||||||| ||||||      ||||  |||||||||    
T  46635643 aaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc------aatcttatttattaa 46635736  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  46635737 acaatccttcgaaatttg 46635754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 56445350 - 56445457
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    |||||||||||||||||||||||| | || |||||||||||||||||  | || || ||||| |||||||||          ||||||||||||||||||    
T  56445350 aaaaacaatctcaagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatccca----------caaaatccaatttattaa 56445439  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| |||||||||||    
T  56445440 acaatcattcgaaatttg 56445457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 29649735 - 29649779
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  29649735 aaaatccatcaaaatccaatttattaaacaatctttcgaaatttg 29649779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 23465108 - 23465049
Alignment:
Q  164 actacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| ||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||    
T  23465108 actagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttg 23465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 28371093 - 28371018
Alignment:
Q  148 ttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||| ||||| ||||| ||||||||| ||||| || |||||| ||||||||||||||||||||  |||||||    
T  28371093 ttcttcttaaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttg 28371018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 28541858 - 28541792
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| ||||| ||| ||||||||||||||||  ||||||||||||||| |||||||||||    
T  28541858 aaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttg 28541792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 31314737 - 31314844
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| |||||||||          |||||||  |||||||||    
T  31314737 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccca----------caaaatctgatttattaa 31314826  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  31314827 acaatccttcgaaatttg 31314844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 27454073 - 27454190
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| || |||| | || |||||||||||||||||||| |    ||||| ||||| ||||| ||| ||||| ||||||||||  |||||||||    
T  27454073 aaaaacaatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaa 27454172  T
Q  206 acaatccttcgaaatttg 223  Q
    | |||| ||| |||||||    
T  27454173 ataatctttcaaaatttg 27454190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 53276025 - 53275933
Alignment:
Q  131 ttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| ||||||||||||||| |  | |||||  | || |||||| || ||||||||||||||||  |||||||| ||||||||||||||||||    
T  53276025 ttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaatccttcgaaatttg 53275933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 32684065 - 32684100
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  32684065 caaaatccaatttattaaacaatccttcgaaatttg 32684100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 36727937 - 36728023
Alignment:
Q  98 tttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcc 185  Q
    ||||||| |||||||||||||| |||||||||  | |||||||||| |||||||| || ||||| ||||| ||||||| | |||||||    
T  36727937 tttaaaaaaaaaacaatctcaaaaaatctcat-gtctcatgaaagattttttcttgttaaaatttcactaaaaaatcctacaaaatcc 36728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 49834890 - 49834925
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  49834890 caaaatccaatttattaaacaatccttcgaaatttg 49834925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 39307260 - 39307365
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||| || | | |||||||| | || ||||| ||||| ||||||||| ||||| ||||||||  ||||| |||||| |||| || ||    
T  39307260 aagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaaactcaattcattaaataatctttaga 39307359  T
Q  218 aatttg 223  Q
    ||||||    
T  39307360 aatttg 39307365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 40537218 - 40537261
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaattt 222  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||    
T  40537218 aaaatccatcaaaatcagatttattaaacaatcattcgaaattt 40537261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 40537150 - 40537224
Alignment:
Q  101 aaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    |||| ||||| ||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||| |||||||||    
T  40537150 aaaaaaaaaaaaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcaccacaaaatcc 40537224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 11090520 - 11090435
Alignment:
Q  101 aaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||| ||||||||||  |||||||||||| |||| || |||||||||||  |  | ||||| ||||| ||||||||| ||||||||    
T  11090520 aaaagaaaaacaatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 6312804 - 6312662
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  6312804 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 6312705  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6312704 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 6312662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 51701810 - 51701668
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  51701810 agaaaaagatagtaacttttaaaataaaaacaatctcaaaaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 51701711  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51701710 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 51701668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 9322470 - 9322612
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  9322470 agaaaaagatagtaaattttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataa 9322569  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  9322570 aatccatcaaaattcaatttattaaacaatccttctaaatttg 9322612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 25612387 - 25612245
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||    
T  25612387 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaa 25612288  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  25612287 aatccatcaaaatccaatttattaaacaatcctttgaaatttg 25612245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 29396358 - 29396500
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  29396358 agaaagagatagtaacttttaaaacaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 29396457  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29396458 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 29396500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 15835023 - 15835165
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15835023 agaaagagatagtaacttttaaaacaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataa 15835122  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  15835123 aatccatcaaaatccaatttattaaacaatcctttgcaatttg 15835165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 48177442 - 48177574
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  48177442 agtatcttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaa 48177541  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||| |||||||||||    
T  48177542 aatccaatttattaaacaatcattcgaaatttg 48177574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 28387363 - 28387505
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || || |||||| |||||||||||||| ||    
T  28387363 agaaagagataataacttttaaaacaaaaacaatctcaagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaa 28387462  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28387463 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 28387505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 46328272 - 46328130
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||| || |||||||| ||||||| ||||||||||||||||| || ||||||||||||||||||||| ||    
T  46328272 agaaagagatagtaacttttaaaagaaaaacaatttcgagaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaa 46328173  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  46328172 aatccatcaaaatccaattaattaaacaatccttcgaaatttg 46328130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 38536075 - 38536201
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||          ||||||||    
T  38536075 agattgtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactac----------aaaatcca 38536164  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38536165 tcaaaatccaatttattaaacaatcctttgaaatttg 38536201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 38558293 - 38558419
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||          ||||||||    
T  38558293 agattgtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactac----------aaaatcca 38558382  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38558383 tcaaaatccaatttattaaacaatcctttgaaatttg 38558419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 9577418 - 9577544
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcca 196  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||| |||||| |  | ||||| ||||| |||||| || ||||||||||||||||||    
T  9577418 ttttaaaagaaaaacaatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccatcaaaatcca 9577517  T
Q  197 atttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||| |||||||    
T  9577518 atttattaaacaatccttctaaatttg 9577544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 222
Target Start/End: Complemental strand, 35279865 - 35279761
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||||||||||||||||||| | |||||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  35279865 aagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 35279766  T
Q  218 aattt 222  Q
    |||||    
T  35279765 aattt 35279761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 29219493 - 29219382
Alignment:
Q  94 aacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaat 193  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||          ||||||||||||    
T  29219493 aacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaa----------atccatcaaaat 29219404  T
Q  194 ccaatttattaaacaatccttc 215  Q
    ||||||||||||||||||||||    
T  29219403 ccaatttattaaacaatccttc 29219382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 18798691 - 18798607
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18798691 agtaacttttaaaacaaaaacaatctctagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 18798607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 35679125 - 35679240
Alignment:
Q  108 aaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaac 207  Q
    ||||||||| |||||||||||| | |||||||||||||||||| |  | ||||| ||||| |||||||||| |||||||||||||||  |||||||||||    
T  35679125 aaacaatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaac 35679224  T
Q  208 aatccttcgaaatttg 223  Q
    ||||||||||||||||    
T  35679225 aatccttcgaaatttg 35679240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 21222349 - 21222235
Alignment:
Q  109 aacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaaca 208  Q
    |||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||    
T  21222349 aacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatcttatttattaaaca 21222250  T
Q  209 atccttcgaaatttg 223  Q
    |||||||||||||||    
T  21222249 atccttcgaaatttg 21222235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 6304247 - 6304364
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||| |||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  6304247 aaaaacaatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 6304346  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  6304347 acaatccttcgaaatttg 6304364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 19451803 - 19451920
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  19451803 aaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 19451902  T
Q  206 acaatccttcgaaatttg 223  Q
    || |||||||||||||||    
T  19451903 acgatccttcgaaatttg 19451920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 49198264 - 49198381
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||| |||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  49198264 aaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 49198363  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  49198364 acaatccttcgaaatttg 49198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 222
Target Start/End: Original strand, 31572204 - 31572308
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||||||  ||||||||||||||||||| || | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  31572204 aagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 31572303  T
Q  218 aattt 222  Q
    |||||    
T  31572304 aattt 31572308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 47780916 - 47780808
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||| | || ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  47780916 aaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 47780817  T
Q  206 acaatcctt 214  Q
    |||||||||    
T  47780816 acaatcctt 47780808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 48668770 - 48668887
Alignment:
Q  96 cttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcc 195  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||          ||||||||    
T  48668770 cttttaaaagaaaaacaatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatccca----------caaaatcc 48668859  T
Q  196 aatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||| |||||||||||    
T  48668860 aatttattaaacaatctttcgaaatttg 48668887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 45272805 - 45272700
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||| || |||||||||||||||||| || ||    
T  45272805 agaaacagataataacttttaaaagaaaaacaatctcaaaaaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaa 45272706  T
Q  181 aatcca 186  Q
    ||||||    
T  45272705 aatcca 45272700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 50192545 - 50192662
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  || ||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  50192545 aaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 50192644  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  50192645 acaatccttcaaaatttg 50192662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 45760004 - 45760121
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||| ||| |||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  45760004 aaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 45760103  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||| ||||    
T  45760104 acaatccttcgaagtttg 45760121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 47654346 - 47654463
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||| |||||||| |  | ||||| | ||| ||||| ||| ||||||||||||||||  |||||||||    
T  47654346 aaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatccatcaaaatctgatttattaa 47654445  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  47654446 acaatccttcgaaatttg 47654463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 29556310 - 29556192
Alignment:
Q  106 aaaaacaatctcaagaaatctcatct-tttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttatta 204  Q
    ||||||||||  |||||||||||| | |||||| ||||||||||||    | ||||| || || |||||||||||||||||||||||||| |||||||||    
T  29556310 aaaaacaatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttatta 29556211  T
Q  205 aacaatccttcgaaatttg 223  Q
    ||||||| |||||||||||    
T  29556210 aacaatctttcgaaatttg 29556192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 32588963 - 32589065
Alignment:
Q  121 aaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaat 220  Q
    ||||||||| |||||||||||||||||||  |  | ||||| ||||| |||||| || ||||||||||||||||| ||||||||||||||||||| ||||    
T  32588963 aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatccttcaaaat 32589062  T
Q  221 ttg 223  Q
    |||    
T  32589063 ttg 32589065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 28824368 - 28824484
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||| || |||||||||||| | || ||||| | ||| ||||||||| ||||||||||||||||  |||||||||    
T  28824368 aaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatccatcaaaatctgatttattaa 28824467  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||| ||||||||||||    
T  28824468 acaat-cttcgaaatttg 28824484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 37014635 - 37014752
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||| |||| |||||||||| |  | ||||| ||||| ||||||| | ||||||||||||||| |||||||| ||    
T  37014635 aaaaacaatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaa 37014734  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| || ||||||||    
T  37014735 acaatctttagaaatttg 37014752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 49418277 - 49418172
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| ||||||||||||| |||||| |  | ||||| || || ||||||||| ||||||||||||||||  |||||||||||||||||| ||    
T  49418277 aagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 49418178  T
Q  218 aatttg 223  Q
    ||||||    
T  49418177 aatttg 49418172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 45536124 - 45536032
Alignment:
Q  131 ttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||    
T  45536124 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatctttcgaaatttg 45536032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 5495117 - 5495181
Alignment:
Q  122 aatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||| || ||||||||||| || ||||||||||||||||||||| ||||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca 5495181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 48524490 - 48524407
Alignment:
Q  140 aagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||| | || ||||| ||||| ||||||||| |||||||||||||| |  ||||||||||||||| ||| |||||||    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttg 48524407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 18798614 - 18798579
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttg 18798579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 730303 - 730237
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| |||||| || ||||||||||||||||  |||||||||||||| | ||||||||||    
T  730303 aaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttg 730237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 955882 - 955838
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttg 955838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 43885158 - 43885202
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||    
T  43885158 aaaatccatcaaaatccaatttattaaataatcattcaaaatttg 43885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 49231008 - 49230974
Alignment:
Q  189 aaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||| ||||||||||||||||    
T  49231008 aaaatccaatttattaaataatccttcgaaatttg 49230974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 51085937 - 51085883
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||| ||||| ||||||||||||||||||| || |||||||| |||||||    
T  51085937 aaaattccacaaaattcatcaaaatccaatttatttaataatccttcaaaatttg 51085883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 33025696 - 33025664
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttc 150  Q
    |||||||||||| ||||||||||||||||||||    
T  33025696 aagaaatctcatgttttcatgaaagactttttc 33025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 14782104 - 14782246
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  14782104 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 14782203  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  14782204 aatccatcaaaatccaatttattaaacaatccttcaaaatttg 14782246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 44725779 - 44725921
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  44725779 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 44725878  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  44725879 aatccatcaaaatccaatttattaaacaatccttcaaaatttg 44725921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 39467437 - 39467579
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  39467437 agaaagagatagtaacttttaaaagaaaaacaatctcaaaaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataa 39467536  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  39467537 aatccatcaaaattcaatttattaaacaatccttcgaaatttg 39467579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 9288436 - 9288568
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||||||    
T  9288436 agtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaa 9288535  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||    
T  9288536 aatccaatttattaaacaatccttcgaaatttg 9288568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 43166660 - 43166801
Alignment:
Q  82 gaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaa 181  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| || ||||||||| ||||||||||| |||    
T  43166660 gaaagagatagtaacttttaaaagaaaaccaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaa 43166759  T
Q  182 atccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43166760 atccatcaaaatccaatttattaaacaatccttcgaaatttg 43166801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 19717856 - 19717992
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||    
T  19717856 agatagtaacttttaaaacaaaaacaatctcaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 19717955  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    | |||||||||||||||||||||| ||||||||||||    
T  19717956 ttaaaatccaatttattaaacaattcttcgaaatttg 19717992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 18958706 - 18958838
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||    
T  18958706 agtaacttttaaaacaaaaacaatctcaaaaaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaa 18958805  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||    
T  18958806 aatccaatttattaaacaatccttcgaaatttg 18958838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 26856304 - 26856162
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| || ||||  |||||||||||||||| || ||||||||||||||||||||| ||    
T  26856304 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaa 26856205  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  26856204 aatccatcaaaatccaatttattaaacaatacttcgaaatttg 26856162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 4403334 - 4403202
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  4403334 agtaacttttaaaagaaaaacaatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaa 4403235  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    || ||||||||||||||||||||||||||||||    
T  4403234 aacccaatttattaaacaatccttcgaaatttg 4403202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 10295360 - 10295492
Alignment:
Q  93 taacttttaaaataaaa-acaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatccca-taaaatccatcaa 190  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||||    
T  10295360 taacttttaaaaaaaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaa 10295459  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||    
T  10295460 aatccaatttattaaacaatccttcgaaatttg 10295492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 18305940 - 18306072
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||       
T  18305940 agaaagagatagtaacttttaaaagaataacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccca--- 18306036  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
           |||||||||||||||||||||||| |||||||||||    
T  18306037 -------caaaatccaatttattaaacaatctttcgaaatttg 18306072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 7466562 - 7466457
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  7466562 agaaagagatcgtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 7466463  T
Q  181 aatcca 186  Q
    ||||||    
T  7466462 aatcca 7466457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 32497744 - 32497620
Alignment:
Q  89 atagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatc 188  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||          |    
T  32497744 atagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatccca----------c 32497655  T
Q  189 aaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||| |||||||||||    
T  32497654 aaaatccaatttattaaacaatcattcgaaatttg 32497620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 37857336 - 37857214
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||          |||||||||    
T  37857336 agtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttcaaattacactacaaa----------atccatcaa 37857247  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||  |||||||    
T  37857246 aatccaatttattaaacaatcctttaaaatttg 37857214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 16362411 - 16362291
Alignment:
Q  93 taacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaa 192  Q
    |||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| || |||||||||||||||          |||||||||||    
T  16362411 taacttttaaaagaaaaacaatctcaagaaatctcatctttttataaaagattttttcttgttaaaattacactacaaa----------atccatcaaaa 16362322  T
Q  193 tccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||    
T  16362321 tccaatttattaaacaatccttcgaaatttg 16362291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 24501807 - 24501924
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  24501807 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 24501906  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  24501907 acaatccttcgaaatttg 24501924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 26374424 - 26374541
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  26374424 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaa 26374523  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  26374524 acaatccttcgaaatttg 26374541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 42305774 - 42305896
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||||          ||||||||| ||    
T  42305774 agtaactttaaaaacaaaaacaatctcaagaaatctcattttttcatgaatgactttttcttgttaaaattacactac----------aaaatccattaa 42305863  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||| |||||||||||||||||||||||    
T  42305864 aatccaattgattaaacaatccttcgaaatttg 42305896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 42937563 - 42937446
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||  |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  42937563 aaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 42937464  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  42937463 acaatccttcgaaatttg 42937446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 42938111 - 42938228
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||    | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  42938111 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 42938210  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  42938211 acaatccttcgaaatttg 42938228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 31623900 - 31623818
Alignment:
Q  93 taacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||||    
T  31623900 taacttttaaaagaaaaacaatctcaagaaatcttatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcc 31623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 7506893 - 7507010
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  7506893 aaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 7506992  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  7506993 acaatccttcaaaatttg 7507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 39189798 - 39189925
Alignment:
Q  94 aacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaat 193  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||| || |||||  |||| ||||| |   |||||||||| ||||    
T  39189798 aacttttaaaagaaaaacaatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaatt-tactagaaaattcatcaaaatccatc-aaat 39189895  T
Q  194 ccaatttattaaacaatccttcgaaatttg 223  Q
     |||||||||||||||||||||||||||||    
T  39189896 tcaatttattaaacaatccttcgaaatttg 39189925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 10392246 - 10392348
Alignment:
Q  121 aaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaat 220  Q
    ||||||||| ||||||||||||| |||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  10392246 aaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 10392345  T
Q  221 ttg 223  Q
    |||    
T  10392346 ttg 10392348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 2704813 - 2704930
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||  ||||| ||||||||| |||||||||||||||   |||||||||    
T  2704813 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatccatcaaaatttgatttattaa 2704912  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| |||||||||||    
T  2704913 acaatcattcgaaatttg 2704930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 5576614 - 5576731
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||| |||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||   ||||||||    
T  5576614 aaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctggtttattaa 5576713  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||| ||||||||||||    
T  5576714 acaattcttcgaaatttg 5576731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 42735271 - 42735388
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||| |||||||||||||||    | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  42735271 aaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 42735370  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||| ||||||||||||    
T  42735371 acaatacttcgaaatttg 42735388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 23115163 - 23115280
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| |    ||||| || || ||||||||| ||||||||||||||||  |||||||||    
T  23115163 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 23115262  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  23115263 acaatccttccaaatttg 23115280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 4031294 - 4031341
Alignment:
Q  128 atcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||    
T  4031294 atcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 4031341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 8410455 - 8410508
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaattt 222  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||    
T  8410455 aaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaattt 8410508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 4031334 - 4031369
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttg 4031369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 31623825 - 31623790
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttg 31623790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 4950010 - 4950115
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||| | ||||||||| || ||| ||||||| | |||||| |  | ||||| ||||| ||||| ||| ||| |||||||||||| ||||||||||    
T  4950010 aaaaacaattttaagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaa 4950109  T
Q  206 acaatc 211  Q
    | ||||    
T  4950110 ataatc 4950115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 13478307 - 13478360
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaattt 222  Q
    ||||||| | |||||||| | ||||| |||||||||||||||||||||||||||    
T  13478307 aaaatcctacaaaatccaacgaaatctaatttattaaacaatccttcgaaattt 13478360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 43959796 - 43959752
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||    
T  43959796 aaaatccatcaaaatctgatttattaaacaatcattcgaaatttg 43959752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 41479299 - 41479221
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatc 184  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||| |  | |||||  |||| ||||||||| ||||||    
T  41479299 aaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaaaatc 41479221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 31895932 - 31895790
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||    
T  31895932 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaa 31895833  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31895832 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 31895790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 14262412 - 14262543
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  14262412 agtaacttttaaaagaaaaacaatctcaagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaa 14262511  T
Q  191 aatccaatttattaaacaatccttcgaaattt 222  Q
    ||||||||||||||||||||||||||||||||    
T  14262512 aatccaatttattaaacaatccttcgaaattt 14262543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 34759025 - 34759161
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||    
T  34759025 agatagtaacttttaaaagaaaaataatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca 34759124  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||| ||||||||    
T  34759125 tcaaaatccaatttattaaacaatccttggaaatttg 34759161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 7497305 - 7497170
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||    
T  7497305 agatagtaacttttaaaagaaaaataatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaat-ccacaaaatcca 7497207  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||| ||||||||||||||    
T  7497206 tcaaaatccaatttattaaacactccttcgaaatttg 7497170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 4200406 - 4200538
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||          ||    
T  4200406 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactac----------aa 4200495  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4200496 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 4200538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 31067719 - 31067587
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||       
T  31067719 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatccca--- 31067623  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
           ||||||||||||||||||||||||||||||||||||    
T  31067622 -------caaaatccaatttattaaacaatccttcgaaatttg 31067587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 34773608 - 34773503
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  218 aatttg 223  Q
    ||||||    
T  34773508 aatttg 34773503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 30385038 - 30385168
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  ||| || || |||||||||||||||||||||       
T  30385038 agaaagagatagtaatttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagac--tttgttgttaaaattacactacaaaatccca--- 30385132  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
           ||||||||||||||||||||||||||||||||||||    
T  30385133 -------caaaatccaatttattaaacaatccttcgaaatttg 30385168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 6197472 - 6197589
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  6197472 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 6197571  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  6197572 acaatccttcgaaatttg 6197589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 2300744 - 2300849
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  2300744 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcga 2300843  T
Q  218 aatttg 223  Q
    ||||||    
T  2300844 aatttg 2300849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 1391835 - 1391718
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| |    ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  1391835 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 1391736  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  1391735 acaatccttccaaatttg 1391718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 29076810 - 29076693
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  || ||||||||| |||| |||||||| |||||| |  | ||||| ||||| ||||||| ||||||||||||||||||  |||||||||    
T  29076810 aaaaacaatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaa 29076711  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  29076710 acaatccttcgaaatttg 29076693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 29111784 - 29111667
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  || ||||||||| |||| |||||||| |||||| |  | ||||| ||||| ||||||| ||||||||||||||||||  |||||||||    
T  29111784 aaaaacaatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaa 29111685  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  29111684 acaatccttcgaaatttg 29111667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 7052044 - 7051939
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||||||  ||| |||||| |||||||| |  | |||||  |||| ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  7052044 aagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaatccttcga 7051945  T
Q  218 aatttg 223  Q
    ||||||    
T  7051944 aatttg 7051939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 28002856 - 28002759
Alignment:
Q  126 tcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| |||||||||||||||||||| |  | ||||| ||||| |||||  || ||||||||||||||||  ||||||||||||||||||| |||||||    
T  28002856 tcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatccatcaaaatctgatttattaaacaatccttccaaatttg 28002759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 2238722 - 2238678
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttc 150  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  2238722 aaaaacaatcttaagaaatctcatgttttcatgaaagattttttc 2238678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 14000074 - 14000216
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  14000074 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 14000173  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  14000174 aatccatcaaaatccaatttattaaacaatccttcaaaatttg 14000216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 39852582 - 39852440
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  39852582 agaaagagatagtaacttttaaaacaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataa 39852483  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  39852482 aatccatcaaaatccaatttagtaaacaatccttcgaaatttg 39852440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 1152072 - 1152214
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||    
T  1152072 agaaagagatagtaacttttaaaagaaaaacaatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaa 1152171  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  1152172 aatccatcaaaatccaatttattaaacaatccctcgaaatttg 1152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 13926168 - 13926026
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||| || ||||||||||||||||||||| ||    
T  13926168 agaaagagatagtaacttttagaagaaaaacaatctcaagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaa 13926069  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13926068 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 13926026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 7947542 - 7947684
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| ||| ||    
T  7947542 agaaagagatattaacttttaaaagaaaaacaatttcaagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaa 7947641  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7947642 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 7947684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 4550246 - 4550368
Alignment:
Q  101 aaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaattt 200  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||| ||||||||||||||||||||||    
T  4550246 aaaaaaaaaacaatctcaacaaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaattt 4550345  T
Q  201 attaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||    
T  4550346 attaaacaatccttcgaaatttg 4550368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 223
Target Start/End: Original strand, 4240433 - 4240563
Alignment:
Q  83 aaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaa 182  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||          ||||    
T  4240433 aaaaagatagtaacttttaaaagaaaaacaatctcaagaaatctcatctattcatgaaagactttttcttgttaaaattacactac----------aaaa 4240522  T
Q  183 tccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4240523 tccatcaaaatccaatttattaaacaatccttcgaaatttg 4240563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 5949329 - 5949203
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||          |||||    
T  5949329 agataataacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaa----------atcca 5949240  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||    
T  5949239 tcaaaatccaatttattaaacaatccttcgaaatttg 5949203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 1461125 - 1461249
Alignment:
Q  89 atagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatc 188  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| |||          ||||||||||    
T  1461125 atagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacagtac----------aaaatccatc 1461214  T
Q  189 aaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||    
T  1461215 aaaatccaatttattaaacaatccttcgaaatttg 1461249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 40013687 - 40013813
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||          ||||||||    
T  40013687 agatagtaactttaaaaacaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactac----------aaaatcca 40013776  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    | ||||||||||| |||||||||||||||||||||||    
T  40013777 ttaaaatccaattgattaaacaatccttcgaaatttg 40013813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 21147279 - 21147162
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  21147279 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 21147180  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  21147179 acaatccttcgaaatttg 21147162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 33656035 - 33656152
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  33656035 aaaaacaatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 33656134  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  33656135 acaatccttcgaaatttg 33656152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 37014124 - 37014037
Alignment:
Q  88 gatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||||||||||    
T  37014124 gatagtaacttttaaaagaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattatactacaaaatcc 37014037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 7016745 - 7016850
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||| ||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  7016745 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 7016844  T
Q  218 aatttg 223  Q
    ||||||    
T  7016845 aatttg 7016850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 5272925 - 5273030
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||| ||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||| |||||    
T  5272925 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcga 5273024  T
Q  218 aatttg 223  Q
    ||||||    
T  5273025 aatttg 5273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 22746501 - 22746392
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||| || ||||||||        ||||| ||||||||||||||| |||||||||||    
T  22746501 aaaaacaatcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattaca--------tcccacaaaatccatcaaaattcaatttattaa 22746410  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| |||||||||||    
T  22746409 acaatcattcgaaatttg 22746392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 32157891 - 32158008
Alignment:
Q  109 aacaatctcaagaaatctcatcttttcatgaaagactttttcttcttg---aaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    |||||| | |||||||||||| ||||||||||||||| ||| ||| ||   |||||  |||| ||||||||| ||||||| |||||||| ||||||||||    
T  32157891 aacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaatccgtcaaaatctaatttattaa 32157990  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  32157991 acaatccttcgaaatttg 32158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 27458944 - 27459058
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||| |||| |||||||||| || |||||| |  | ||||| ||||| ||||||||| |||||||||||||||| ||||||||||    
T  27458944 aaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaa 27459043  T
Q  206 acaatccttcgaaat 220  Q
    |||||||||| ||||    
T  27459044 acaatccttcaaaat 27459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 139473 - 139368
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||| ||||||||||||||| | || ||||| ||||  ||||||| | ||||||||||||||||   ||||||||||||||||||||    
T  139473 aagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcga 139374  T
Q  218 aatttg 223  Q
    ||||||    
T  139373 aatttg 139368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 849334 - 849242
Alignment:
Q  131 ttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||| |  | ||||| ||||| ||||||||| |||||| |||||||||  |||||||||||||||||||||||||||    
T  849334 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttg 849242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 9689869 - 9689753
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||||| || |||| ||||||||||||||| |  | |||||  || | |||||| || | |||||||||||||| ||||||| ||    
T  9689869 aaaaacaatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaa 9689770  T
Q  206 acaatccttcgaaattt 222  Q
    |||||| ||||||||||    
T  9689769 acaatcattcgaaattt 9689753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 6460953 - 6460887
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| ||||||||  ||||||||||||||||  ||||||||||||| |||||||||||||    
T  6460953 aaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaaaccttcgaaatttg 6460887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 14465279 - 14465338
Alignment:
Q  164 actacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| ||||| ||| ||||| ||||||||||| ||||||||||||||| |||||||||||    
T  14465279 actagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttg 14465338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 36674100 - 36674242
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  36674100 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 36674199  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  36674200 aatccatcaaaatccaatttattaaacaatccttcaaaatttg 36674242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 18749848 - 18749706
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  18749848 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 18749749  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18749748 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 18749706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 32580412 - 32580270
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||  ||    
T  32580412 agaaaaagatagtaatttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaa 32580313  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32580312 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 32580270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 17946524 - 17946382
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  17946524 agaaatagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 17946425  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  17946424 aatccatcaaaatccaatttattaaacaatcctttgaaatttg 17946382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 34484000 - 34484142
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| ||    
T  34484000 agaaagagatagtaacttttaaaacaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaa 34484099  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34484100 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 34484142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 44906483 - 44906625
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||    
T  44906483 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaa 44906582  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  44906583 aattcatcaaaatccaatttattaaacaatccttcgaaatttg 44906625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 11431750 - 11431621
Alignment:
Q  93 taacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaa 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| |||||    
T  11431750 taacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaa 11431651  T
Q  193 tccaatttattaaacaatccttcgaaattt 222  Q
    ||||||||||||||||||||||||||||||    
T  11431650 tccaatttattaaacaatccttcgaaattt 11431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 54629080 - 54628938
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||    
T  54629080 agaaagagatagtaactttcaaaagaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaa 54628981  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  54628980 aatccatcaaaatccaatttattaaacaatcctttgaaatttg 54628938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 26107497 - 26107355
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||||||| || ||    
T  26107497 agaaagagaaagtaacttttaaaagaaaaacaatctcaagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaa 26107398  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26107397 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 26107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 48379393 - 48379251
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||| ||    
T  48379393 agaaagagatagtaacatttaaaagaaaaacaatctcaagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaa 48379294  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  48379293 aatccatcaaaattcaatttattaaacaatccttcgaaatttg 48379251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 40897375 - 40897238
Alignment:
Q  87 agatagtaactttt-aaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcc 185  Q
    |||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |||||||    
T  40897375 agatagtaactttacaaaagaaaaacaatatcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatcc 40897276  T
Q  186 atcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40897275 atcaaaatccaatttattaaacaatccttcgaaatttg 40897238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 31646256 - 31646396
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| || ||||||||||||||| || |||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  31646256 agaaagaggtagtaacttttaaaagaataacaatctcaagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 31646353  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  31646354 aatccatcaaaatccaattcattaaacaatctttcgaaatttg 31646396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 52617941 - 52618077
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||       ||||||||||||||||||||| ||    
T  52617941 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatctttttatgaaagacttgtta------aaattacactacaaaatcccacaa 52618034  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52618035 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 52618077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 52810614 - 52810472
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||| ||    
T  52810614 agaaagagatagtttcttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaa 52810515  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||    
T  52810514 aatccatcaaaattcaatttattaaacaatcattcaaaatttg 52810472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 51737697 - 51737838
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||  |||||||||||||||||  || ||||||| ||||||||||||||||| || ||||||||| ||||||||||| ||    
T  51737697 agaaagagataataacttttaaag-aaaaacaatctcaagaatacttatctttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaa 51737795  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51737796 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 51737838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 104 - 215
Target Start/End: Original strand, 50903233 - 50903344
Alignment:
Q  104 ataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttatt 203  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||    
T  50903233 ataaaaacaatctcaagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttatt 50903332  T
Q  204 aaacaatccttc 215  Q
    ||||||||||||    
T  50903333 aaacaatccttc 50903344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 10728629 - 10728753
Alignment:
Q  89 atagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatc 188  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||          ||||||||||    
T  10728629 atagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactac----------aaaatccatc 10728718  T
Q  189 aaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||| |||||||    
T  10728719 aaaatccaatttattaaacaatccttccaaatttg 10728753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 39038260 - 39038134
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||          |||||    
T  39038260 agatagtaacttttaaaagaaaaacaatttcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaa----------atcca 39038171  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39038170 tcaaaatccaatttattaaacaattcttcgaaatttg 39038134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 50762038 - 50762160
Alignment:
Q  89 atagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatc 188  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||          ||||||||||    
T  50762038 atagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactac----------aaaatccatc 50762127  T
Q  189 aaaatccaatttattaaacaatccttcgaaatt 221  Q
    |||||||||||||| |||||||| |||||||||    
T  50762128 aaaatccaatttatcaaacaatcattcgaaatt 50762160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 3206200 - 3206317
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  3206200 aaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 3206299  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  3206300 acaatccttcgaaatttg 3206317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 37455075 - 37454955
Alignment:
Q  93 taacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaa 192  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||          |||||    
T  37455075 taacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatccca----------caaaa 37454986  T
Q  193 tccaatttattaaacaatccttcgaaatttg 223  Q
    | ||||||||||||||||| |||||||||||    
T  37454985 ttcaatttattaaacaatcattcgaaatttg 37454955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 23753377 - 23753470
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  23753377 agaaagagatagtaacttttaaaacaaaaacaatctcaagaaatctcatc-tttcatgaaagactttttcttgttaaaattacactacaaaatcc 23753470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 996081 - 996198
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  996081 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 996180  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  996181 acaatccttcgaaatttg 996198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 10139141 - 10139258
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  10139141 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 10139240  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  10139241 acaatccttcgaaatttg 10139258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 19254038 - 19253921
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  19254038 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaa 19253939  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  19253938 acaatccttcgaaatttg 19253921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 20498420 - 20498303
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  20498420 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 20498321  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  20498320 acaatccttcgaaatttg 20498303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 39842464 - 39842596
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| |||          ||    
T  39842464 agaaagagatggtaacttttaaaagaaaaacaatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacattac----------aa 39842553  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||    
T  39842554 aatccgtcaaaatctaatttattaaacaattcttcgaaatttg 39842596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 6035039 - 6035165
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatcca 196  Q
    |||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |  | |||||  |||| ||||||||| |||||||||||||||| |    
T  6035039 ttttaaaagaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatcta 6035138  T
Q  197 atttattaaacaatccttcgaaatttg 223  Q
    |||||||||||| | ||||||||||||    
T  6035139 atttattaaacattgcttcgaaatttg 6035165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 33807796 - 33807910
Alignment:
Q  109 aacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaaca 208  Q
    |||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||    
T  33807796 aacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaaca 33807895  T
Q  209 atccttcgaaatttg 223  Q
    |||||||||||||||    
T  33807896 atccttcgaaatttg 33807910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 3999640 - 3999757
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  3999640 aaaaacaatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 3999739  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  3999740 acaatccttcgaaatttg 3999757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 37820472 - 37820589
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||| |  | ||||| ||||  ||||||||| ||||||||||||||||  |||||||||    
T  37820472 aaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatccatcaaaatctgatttattaa 37820571  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  37820572 acaatccttcgaaatttg 37820589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 44762032 - 44762145
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  44762032 aaaaacaatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaa 44762131  T
Q  206 acaatccttcgaaa 219  Q
    ||||||||||||||    
T  44762132 acaatccttcgaaa 44762145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 45863060 - 45862983
Alignment:
Q  98 tttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  45863060 tttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 54625803 - 54625686
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    |||| |||||| |||||||||||| ||||||||||| |||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  54625803 aaaatcaatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 54625704  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  54625703 acaatccttcgaaatttg 54625686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 5825273 - 5825156
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||| ||||||| |  |  |||| ||||| ||||||||| |||||| ||||||||||||||||||||    
T  5825273 aaaaacaatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaa 5825174  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  5825173 acaatccttcaaaatttg 5825156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 6589775 - 6589658
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  6589775 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 6589676  T
Q  206 acaatccttcgaaatttg 223  Q
    | ||| ||||||||||||    
T  6589675 ataattcttcgaaatttg 6589658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 20833187 - 20833094
Alignment:
Q  122 aatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttc 215  Q
    ||||| |||||||||||||| |||||||||| || |||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttc 20833094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 29448853 - 29448970
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||  |  | |||||  |||| ||||||||| ||||||||||||||||  |||||||||    
T  29448853 aaaaacaatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaa 29448952  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  29448953 acaatccttcgaaatttg 29448970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 40247055 - 40246938
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| |    ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  40247055 aaaaacaatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 40246956  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  40246955 acaatccttccaaatttg 40246938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 35337930 - 35337829
Alignment:
Q  121 aaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaat 220  Q
    ||||||||| ||||||||||| |||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  35337930 aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 35337832  T
Q  221 ttg 223  Q
    |||    
T  35337831 ttg 35337829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 33996548 - 33996653
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||| || |||||||||||| |  | ||||| ||||| ||||||||  ||||||||||||||||  |||||||||||||||||||||    
T  33996548 aagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcga 33996647  T
Q  218 aatttg 223  Q
    ||||||    
T  33996648 aatttg 33996653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 10660747 - 10660691
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcat 137  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10660747 agaaaaaaatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcat 10660691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 25418577 - 25418460
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||| |||||||| ||||||||||| |||||||| |    ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  25418577 aaaaacaatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 25418478  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||  |||||||    
T  25418477 acaatcctttcaaatttg 25418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 1439889 - 1440005
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  || ||||||||| ||||| |||||||||||||| |    |||||  |||| ||||||||| |||||| ||||||||| ||||||||||    
T  1439889 aaaaacaatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatctatcaaaatctaatttattaa 1439988  T
Q  206 acaatccttcgaaattt 222  Q
    |||||||||| ||||||    
T  1439989 acaatccttccaaattt 1440005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 6131228 - 6131316
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatc 194  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||    
T  6131228 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatc 6131316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 15492836 - 15492942
Alignment:
Q  81 agaaaaagatagtaa-cttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccata 179  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| ||   ||||||||||| |||||||| || ||||| ||||| || |||| | |    
T  15492836 agaaatagatagtaaacttttaaaataaaaacaatctcaagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctaca 15492935  T
Q  180 aaatcca 186  Q
    |||||||    
T  15492936 aaatcca 15492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 10660673 - 10660629
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10660673 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 10660629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 44276598 - 44276506
Alignment:
Q  94 aacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    ||||||||||| ||||| |||| ||| ||||||||| | ||||||||||| |||||||| || ||||| ||||| ||||||||| ||||||||    
T  44276598 aacttttaaaagaaaaataatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca 44276506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 53929123 - 53929239
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  || ||||||||| ||||||| ||||| |||||| |  | ||||| ||||| ||||||| | ||||||||||||||||  |||||||||    
T  53929123 aaaaacaatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaa 53929222  T
Q  206 acaatccttcgaaattt 222  Q
    |||||| ||||| ||||    
T  53929223 acaatcgttcgatattt 53929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 1440010 - 1440064
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  1440010 aaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttg 1440064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 22057922 - 22057856
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  22057922 aaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttg 22057856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 51699495 - 51699592
Alignment:
Q  126 tcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| |||||| |||||| |||||| |  | ||||| ||||| ||||||||| ||||| ||||||||||  ||||||||| |||||||||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttg 51699592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 52114728 - 52114623
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| ||||||  ||||| |||||| |  | |||||  |||| ||||| ||| |||||| |||||||||  ||||||||||||||||| |||    
T  52114728 aagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatctatcaaaatctgatttattaaacaatcctgcga 52114629  T
Q  218 aatttg 223  Q
    ||||||    
T  52114628 aatttg 52114623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 539476 - 539516
Alignment:
Q  183 tccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttg 539516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 55235322 - 55235278
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||| |||||||||||||||||| |||||||||||    
T  55235322 aaaatccatcaaaaaccaatttattaaacaatctttcgaaatttg 55235278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 23753463 - 23753498
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttg 23753498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 29030153 - 29030099
Alignment:
Q  169 aaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||| ||||||||||||||||  ||||||||||||||||||| |||||||    
T  29030153 aaaattccacaaaatccatcaaaatctgatttattaaacaatccttcaaaatttg 29030099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 27899545 - 27899467
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatc 184  Q
    ||||||||||  ||||||| |||| |||||||||||||||||||| |  | ||||| ||||| ||||||| | ||||||    
T  27899545 aaaaacaatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatc 27899467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 33807678 - 33807719
Alignment:
Q  109 aacaatctcaagaaatctcatcttttcatgaaagactttttc 150  Q
    |||||||  |||||||||||| ||||||||||||||||||||    
T  33807678 aacaatcctaagaaatctcatgttttcatgaaagactttttc 33807719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 10797 - 10655
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  10797 agaaagagatagtaacttttaaaacaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataa 10698  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  10697 aatccatcaaaattcaatttattaaacaatcctttgaaatttg 10655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 85 - 223
Target Start/End: Complemental strand, 18177501 - 18177363
Alignment:
Q  85 aaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||| ||||||    
T  18177501 aaagatagtaacttttaaaataaaaacaatctcaagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 18177402  T
Q  185 catcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18177401 catcaaaatccaattaattaaacaatccttcgaaatttg 18177363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 26789021 - 26788882
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| || ||||||||||||||||||||| ||    
T  26789021 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatctt---atgaaagactttttcttgttaaaattacactacaaaatcccacaa 26788925  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  26788924 aatccatcaaaatccaatttattaaacaatccttcaaaatttg 26788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 10657644 - 10657502
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||||||||||||| ||    
T  10657644 agaaagagatagtaccttttaaaagaaaaacaatctcaagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaa 10657545  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  10657544 aatccatcaaaatccaatttattaaacaatcattcgaaatttg 10657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 25288389 - 25288255
Alignment:
Q  89 atagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatc 188  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||||| ||||| ||||    
T  25288389 atagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatc 25288290  T
Q  189 aaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||    
T  25288289 aaaatccaatttattaaacaatccttcgaaatttg 25288255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 28844793 - 28844651
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| ||| ||    
T  28844793 agaaatagatactaacttttaaaagaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaa 28844694  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  28844693 aatccatcaaaatctaatttattaaacaatccttcgaaatttg 28844651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 33135860 - 33135719
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||| ||    
T  33135860 agaaagagataataacttttaaaagaaaaacaatctcaagaaatctcatttttt-atgaaagactttttcttgttaaaattacactacaaaatcccacaa 33135762  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33135761 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 33135719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 43078801 - 43078659
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| | || ||||||||||| ||||||||| ||    
T  43078801 agaaagagatactaacttttaaaacaaaaacaatctcaagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaa 43078702  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  43078701 aatccatgaaaatccaatttattaaacaatcattcgaaatttg 43078659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 219
Target Start/End: Complemental strand, 3463894 - 3463772
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||          |||||    
T  3463894 agatagtaacttttaaaacaaaaacaatctcaagaaatctcatattttcatgaaagactttttcttgttaaaattacactacaaa----------atcca 3463805  T
Q  187 tcaaaatccaatttattaaacaatccttcgaaa 219  Q
    |||||||||||||||||||||||||||| ||||    
T  3463804 tcaaaatccaatttattaaacaatcctttgaaa 3463772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 28740275 - 28740397
Alignment:
Q  91 agtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaa 190  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||          ||| ||||||||||||    
T  28740275 agtaacttttaaaagaaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattaca----------ccacaaaatccatcaa 28740364  T
Q  191 aatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||    
T  28740365 aatccaatttattaaacaatccttcgaaatttg 28740397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 13833404 - 13833536
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||| |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||       
T  13833404 agaaagagatagtaatttttaaaagaaaagcaatctcaagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatccca--- 13833500  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
           |||||||||||||||||||||||||||| |||||||    
T  13833501 -------caaaatccaatttattaaacaatccttcaaaatttg 13833536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 6224539 - 6224633
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  6224539 agaaagagatagtaacttttaaaagaaaaacaatatcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 6224633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 12407593 - 12407476
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  12407593 aaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 12407494  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  12407493 acaatccttcaaaatttg 12407476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 16269904 - 16269787
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  16269904 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaa 16269805  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  16269804 acaatccttcgaaatttg 16269787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 24776568 - 24776451
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  24776568 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 24776469  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  24776468 acaatccttcgaaatttg 24776451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 20605449 - 20605333
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  20605449 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 20605350  T
Q  206 acaatccttcgaaattt 222  Q
    |||||||||||||||||    
T  20605349 acaatccttcgaaattt 20605333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 379165 - 379033
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||| |||||||| |||||||||||||| |||||||||||||||||||| || |||||||| || ||||||||||||||              
T  379165 agaaagagatagtaagttttaaaagaaaaacaatctcaataaatctcatcttttcatgaacgattttttcttgttaaaattacactacaa---------- 379076  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  379075 aatctatcaaaatccaatttattaaacaatccttcaaaatttg 379033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 7027125 - 7027054
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttctt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7027125 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagattttttctt 7027054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 215210 - 215303
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  215210 agaaagagatagtaacttttaaaagaaaaacaatctcatgaaatctcatcttttcatgaaagactttttc-tgttaaaattacactacaaaatcc 215303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 14198574 - 14198691
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  14198574 aaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 14198673  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  14198674 acaatccttcgaaatttg 14198691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 31170621 - 31170738
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  31170621 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 31170720  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||| ||||||||    
T  31170721 acaatccttggaaatttg 31170738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 32125454 - 32125349
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||||||||||||||||||| |  | |||||  |||| ||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  32125454 aagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 32125355  T
Q  218 aatttg 223  Q
    ||||||    
T  32125354 aatttg 32125349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 35317275 - 35317158
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||| | ||||||||| || |||||||||||||||||||| |  | ||||| ||||| ||||| ||| ||||||||||||||||  |||||||||    
T  35317275 aaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaa 35317176  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  35317175 acaatccttcgaaatttg 35317158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 5093044 - 5093161
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||| |  | ||||| || || ||||||||| ||||||||||||||||  |||||||||    
T  5093044 aaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaa 5093143  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  5093144 acaatccttcaaaatttg 5093161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 22551760 - 22551877
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||| |||||||| |  | ||||| ||||| ||||||||| |||||||||||||||  |||||| |||    
T  22551760 aaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttaataa 22551859  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| |||||||||||    
T  22551860 acaatcattcgaaatttg 22551877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 43847859 - 43847742
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||| |||||||||| |  | ||||| ||||| ||||| ||| ||||||||||||| ||  |||||||||    
T  43847859 aaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaattctgatttattaa 43847760  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  43847759 acaatccttcgaaatttg 43847742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 9120339 - 9120231
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| ||||||||||||| |||| | |  | ||||| ||||| ||||||||| |||||||||||||||| ||||||||||    
T  9120339 aaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaa 9120240  T
Q  206 acaatcctt 214  Q
    |||||||||    
T  9120239 acaatcctt 9120231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 10125271 - 10125404
Alignment:
Q  81 agaaaaagatagtaa-cttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccata 179  Q
    ||||| ||||||||| ||||||||| ||||||||||| |||||||||| | |||| ||||||||||||||||| || ||||| ||||| |||||||||      
T  10125271 agaaagagatagtaaacttttaaaagaaaaacaatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatccca-- 10125368  T
Q  180 aaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
            |||||| |||||||||||||||||||| ||||||||    
T  10125369 --------caaaattcaatttattaaacaatcctttgaaatttg 10125404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 305464 - 305579
Alignment:
Q  108 aaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaac 207  Q
    ||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| |||||| || |||||||||| |||||  |||||||||||    
T  305464 aaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatccatcgaaatctgatttattaaac 305563  T
Q  208 aatccttcgaaatttg 223  Q
    |||| ||| |||||||    
T  305564 aatcattcaaaatttg 305579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 1789630 - 1789538
Alignment:
Q  131 ttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||| ||||||||||||||| |  | ||||| || || ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttg 1789538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 7026744 - 7026700
Alignment:
Q  179 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7026744 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 7026700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 3575049 - 3574971
Alignment:
Q  97 ttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    |||||||| ||||||||||||||||||||||| ||||| | |||| | ||||| || || |||||||||||||||||||    
T  3575049 ttttaaaagaaaaacaatctcaagaaatctcaactttttacgaaatatttttttttgttaaaattacactacaaaatcc 3574971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 44765937 - 44765871
Alignment:
Q  157 aaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||    
T  44765937 aaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatctttcgaaatttg 44765871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 3574978 - 3574943
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttg 3574943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 6224626 - 6224661
Alignment:
Q  188 caaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttg 6224661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 7026775 - 7026738
Alignment:
Q  138 gaaagactttttcttcttgaaattacactacaaaatcc 175  Q
    ||||||||||||||| || |||||||||||||||||||    
T  7026775 gaaagactttttcttgttaaaattacactacaaaatcc 7026738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 39587 - 39729
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  39587 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 39686  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  39687 aatccatcaaaatccaatttattaaataatccttcgaagtttg 39729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 58046 - 58188
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| || |||||| |||||||||||||| ||    
T  58046 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaa 58145  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  58146 aatccatcaaaatccaatttattaaacaatcattcgaaatttg 58188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 36880 - 37018
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||| |||||||||||| ||   |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||    
T  36880 agaaagagataataacttttaaaagaa---caatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaa 36976  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaattt 222  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  36977 aatccatcaaaatccaatttattaaacaatgcttcgaaattt 37018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 3662 - 3798
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| |||||||||||||| |||| | ||||||| ||||||||| ||||||| || ||||||||||||||||||||| ||    
T  3662 agaaagagatagtaacttttaaaagaaaaacaatctcaaaaaatataatctttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaa 3761  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcga 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3762 aatccatcaaaatccaatttattaaacaatcattcga 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 1097 - 959
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| ||||||||||||||||||   |||||||||||||||||||||| |||| ||||||||||||||||  || ||||||||||||||||||||| ||    
T  1097 agaaagagatagtaacttttaaaa---aaacaatctcaagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaa 1001  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||| | |||||||||| ||| ||||||||||||    
T  1000 aatccatcaaaat-ctatttattaaataattcttcgaaatttg 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 14991 - 14892
Alignment:
Q  87 agatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatcca 186  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  14991 agatagtaacttttaaaagaaaaacaatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 14109 - 13977
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||||             
T  14109 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccactacaaa--------- 14019  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
     |||||||||||||||||||||||||||||| || ||||||||    
T  14018 -atccatcaaaatccaatttattaaacaatcttttgaaatttg 13977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 21218 - 21350
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||          ||    
T  21218 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccactac----------aa 21307  T
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  21308 aatccatcaaaatccaatttattaaacaatcttttgaaatttg 21350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 28579 - 28463
Alignment:
Q  81 agaaaaagatagtaacttttaaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataa 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||          ||    
T  28579 agaaagagatagtaacttttaaaagaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccactac---------caa 28489  T
Q  181 aatccatcaaaatccaatttattaaa 206  Q
    ||||||||||||||||||||||||||    
T  28488 aatccatcaaaatccaatttattaaa 28463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 15028 - 15145
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||| |||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  15028 aaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 15127  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  15128 acaatccttcgaaatttg 15145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 15671 - 15788
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||||||| |||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  15671 aaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 15770  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  15771 acaatccttcgaaatttg 15788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 38600 - 38716
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  | |||||||    
T  38600 aaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctga-ttattaa 38698  T
Q  206 acaatccttcgaaatttg 223  Q
    ||||||||||||||||||    
T  38699 acaatccttcgaaatttg 38716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 100411 - 100306
Alignment:
Q  118 aagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcga 217  Q
    |||||||||||| |||||||||||||||||||||| || ||||| ||||| |||| |||| |||||||||||||||   |||||||||||||||||| ||    
T  100411 aagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcctttga 100312  T
Q  218 aatttg 223  Q
    ||||||    
T  100311 aatttg 100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 102307 - 102190
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||| |  | ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  102307 aaaaacaatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 102208  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||| |||||||||||    
T  102207 acaatctttcgaaatttg 102190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 38890 - 39007
Alignment:
Q  106 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 205  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| |    ||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  38890 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 38989  T
Q  206 acaatccttcgaaatttg 223  Q
    |||||||||| |||||||    
T  38990 acaatccttccaaatttg 39007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 529 - 651
Alignment:
Q  101 aaaataaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttcttgaaattacactacaaaatcccataaaatccatcaaaatccaattt 200  Q
    |||| ||||| ||||  |||||||||||| ||||| | |||||||||||| |    ||||| ||||| ||||| ||| |||||||||||||||   ||||    
T  529 aaaaaaaaaaaaatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgattt 628  T
Q  201 attaaacaatccttcgaaatttg 223  Q
    ||||||||||||||| |||||||    
T  629 attaaacaatccttccaaatttg 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 4337 - 4295
Alignment:
Q  181 aatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttg 4295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 199980 - 199920
Alignment:
Q  163 cactacaaaatcccataaaatccatcaaaatccaatttattaaacaatccttcgaaatttg 223  Q
    ||||| |||||| || |||||| |||||||| |||||||||||||| || ||| |||||||    
T  199980 cactaaaaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttg 199920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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