View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0455_low_38 (Length: 252)

Name: NF0455_low_38
Description: NF0455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0455_low_38
NF0455_low_38
[»] chr1 (55 HSPs)
chr1 (26-232)||(730140-730350)
chr1 (26-190)||(49198313-49198476)
chr1 (26-190)||(19451852-19452016)
chr1 (26-190)||(21222139-21222303)
chr1 (26-190)||(28824417-28824580)
chr1 (26-190)||(35679172-35679336)
chr1 (26-190)||(50192594-50192759)
chr1 (26-184)||(35279664-35279822)
chr1 (26-190)||(6304296-6304461)
chr1 (26-190)||(45760053-45760218)
chr1 (26-190)||(45535936-45536100)
chr1 (26-190)||(47654395-47654560)
chr1 (26-182)||(29396440-29396596)
chr1 (26-190)||(49418076-49418240)
chr1 (26-182)||(51701572-51701728)
chr1 (26-181)||(28387446-28387601)
chr1 (106-182)||(6312645-6312722)
chr1 (106-190)||(31572241-31572326)
chr1 (26-182)||(46328034-46328190)
chr1 (26-190)||(47780703-47780867)
chr1 (26-190)||(48524311-48524475)
chr1 (109-190)||(9577476-9577558)
chr1 (109-190)||(29556178-29556260)
chr1 (106-190)||(32588997-32589082)
chr1 (106-182)||(48177514-48177591)
chr1 (106-181)||(25612228-25612304)
chr1 (26-182)||(9322552-9322708)
chr1 (106-182)||(15835105-15835182)
chr1 (26-158)||(18798483-18798614)
chr1 (26-161)||(38536163-38536297)
chr1 (26-161)||(38558381-38558515)
chr1 (26-157)||(49230878-49231008)
chr1 (26-91)||(953811-953876)
chr1 (26-91)||(22183362-22183427)
chr1 (106-161)||(29219357-29219412)
chr1 (109-190)||(37014684-37014766)
chr1 (108-161)||(955823-955876)
chr1 (106-190)||(51085866-51085951)
chr1 (26-83)||(6312524-6312581)
chr1 (26-91)||(8141271-8141336)
chr1 (26-83)||(8141321-8141378)
chr1 (26-83)||(15835246-15835303)
chr1 (26-83)||(25612107-25612164)
chr1 (106-158)||(33025584-33025636)
chr1 (19-83)||(47784372-47784436)
chr1 (106-158)||(48668852-48668904)
chr1 (26-91)||(5495239-5495304)
chr1 (26-83)||(9322693-9322750)
chr1 (26-83)||(18798441-18798498)
chr1 (26-91)||(29556096-29556161)
chr1 (26-83)||(49230836-49230893)
chr1 (26-83)||(51701530-51701587)
chr1 (106-158)||(5495173-5495225)
chr1 (26-82)||(29219238-29219294)
chr1 (19-75)||(48668931-48668987)
[»] scaffold0400 (1 HSPs)
scaffold0400 (26-190)||(15077-15241)
[»] scaffold0365 (1 HSPs)
scaffold0365 (26-190)||(15720-15884)
[»] chr8 (44 HSPs)
chr8 (26-190)||(26374473-26374637)
chr8 (26-190)||(42938160-42938324)
chr8 (26-190)||(5576663-5576828)
chr8 (26-190)||(24501856-24502020)
chr8 (26-190)||(42937352-42937514)
chr8 (26-183)||(2704869-2705026)
chr8 (26-190)||(7506942-7507106)
chr8 (26-190)||(42735320-42735484)
chr8 (26-190)||(10392280-10392444)
chr8 (19-182)||(9288508-9288671)
chr8 (26-189)||(23115213-23115375)
chr8 (26-158)||(41479096-41479227)
chr8 (26-176)||(43166747-43166897)
chr8 (26-182)||(26856065-26856222)
chr8 (26-182)||(14782186-14782342)
chr8 (26-182)||(44725861-44726017)
chr8 (26-158)||(32711358-32711489)
chr8 (26-182)||(10295431-10295588)
chr8 (106-182)||(4403185-4403262)
chr8 (106-182)||(18958778-18958855)
chr8 (26-182)||(19717932-19718088)
chr8 (26-182)||(39467519-39467675)
chr8 (26-158)||(31623694-31623825)
chr8 (26-170)||(43959657-43959800)
chr8 (19-161)||(16362188-16362329)
chr8 (26-158)||(4031334-4031465)
chr8 (107-190)||(4950059-4950143)
chr8 (26-158)||(18306037-18306168)
chr8 (26-158)||(32497524-32497655)
chr8 (104-176)||(8410455-8410528)
chr8 (26-158)||(7466334-7466465)
chr8 (19-83)||(42305977-42306041)
chr8 (26-157)||(42305862-42305992)
chr8 (26-88)||(18958914-18958976)
chr8 (108-176)||(13478307-13478376)
chr8 (26-83)||(14782327-14782384)
chr8 (26-83)||(19718073-19718130)
chr8 (108-188)||(39189860-39189940)
chr8 (21-86)||(41069938-41070003)
chr8 (26-83)||(44726002-44726059)
chr8 (106-161)||(37857197-37857252)
chr8 (26-83)||(7466292-7466349)
chr8 (26-91)||(10295565-10295630)
chr8 (26-83)||(18306153-18306210)
[»] chr7 (70 HSPs)
chr7 (26-190)||(34695273-34695437)
chr7 (26-190)||(43581133-43581297)
chr7 (26-190)||(973184-973348)
chr7 (26-190)||(20275306-20275470)
chr7 (26-190)||(30440796-30440960)
chr7 (26-190)||(9179873-9180027)
chr7 (26-190)||(7719303-7719467)
chr7 (26-190)||(12893408-12893572)
chr7 (26-190)||(40996692-40996856)
chr7 (26-190)||(47914266-47914430)
chr7 (26-179)||(34009012-34009166)
chr7 (26-190)||(44343439-44343603)
chr7 (26-182)||(3022919-3023075)
chr7 (46-190)||(7718405-7718549)
chr7 (106-190)||(12963773-12963858)
chr7 (26-190)||(18914778-18914942)
chr7 (106-190)||(43679493-43679578)
chr7 (37-190)||(32142960-32143115)
chr7 (26-182)||(9882287-9882443)
chr7 (106-190)||(10068539-10068624)
chr7 (26-182)||(23101291-23101447)
chr7 (26-182)||(33382630-33382786)
chr7 (26-190)||(47879168-47879332)
chr7 (26-182)||(28034856-28035012)
chr7 (106-182)||(28342419-28342496)
chr7 (26-182)||(29614815-29614971)
chr7 (26-182)||(39784092-39784248)
chr7 (106-233)||(7718344-7718490)
chr7 (26-161)||(44121973-44122107)
chr7 (105-190)||(43187400-43187486)
chr7 (26-182)||(7993135-7993291)
chr7 (26-182)||(8675326-8675482)
chr7 (106-182)||(18838461-18838538)
chr7 (26-182)||(32883775-32883931)
chr7 (106-180)||(7113531-7113606)
chr7 (26-161)||(31638875-31639009)
chr7 (106-190)||(39219420-39219504)
chr7 (21-161)||(3797130-3797269)
chr7 (19-91)||(44623418-44623490)
chr7 (26-161)||(509649-509783)
chr7 (108-190)||(10676463-10676546)
chr7 (106-161)||(19251611-19251666)
chr7 (106-179)||(25805764-25805838)
chr7 (19-161)||(40460780-40460921)
chr7 (106-182)||(12740445-12740521)
chr7 (26-170)||(46405494-46405638)
chr7 (26-158)||(727512-727644)
chr7 (106-158)||(17001099-17001151)
chr7 (106-158)||(47066776-47066828)
chr7 (26-161)||(37327920-37328054)
chr7 (106-176)||(44256823-44256894)
chr7 (26-83)||(9882428-9882485)
chr7 (26-83)||(28342298-28342355)
chr7 (106-178)||(1470289-1470361)
chr7 (26-162)||(33892322-33892457)
chr7 (106-161)||(29585586-29585641)
chr7 (26-161)||(39028090-39028224)
chr7 (26-83)||(23101249-23101306)
chr7 (26-83)||(29614956-29615013)
chr7 (122-182)||(37972918-37972979)
chr7 (26-83)||(39784050-39784107)
chr7 (140-183)||(10617024-10617068)
chr7 (131-174)||(41827401-41827445)
chr7 (106-161)||(447855-447910)
chr7 (26-73)||(7113456-7113503)
chr7 (26-83)||(8078395-8078453)
chr7 (26-83)||(17001215-17001272)
chr7 (109-158)||(19810874-19810923)
chr7 (26-83)||(37327878-37327935)
chr7 (26-83)||(48117785-48117842)
[»] chr6 (20 HSPs)
chr6 (26-190)||(6197521-6197685)
chr6 (26-190)||(2300781-2300945)
chr6 (30-190)||(7051847-7052007)
chr6 (26-189)||(1391622-1391785)
chr6 (26-190)||(28002663-28002827)
chr6 (26-190)||(29076596-29076761)
chr6 (26-182)||(31895694-31895850)
chr6 (26-190)||(29111569-29111735)
chr6 (26-176)||(34773407-34773557)
chr6 (26-182)||(34759101-34759258)
chr6 (106-182)||(14262484-14262561)
chr6 (106-170)||(7497153-7497218)
chr6 (106-158)||(30385133-30385185)
chr6 (106-158)||(31067570-31067622)
chr6 (17-91)||(656955-657028)
chr6 (26-83)||(14262625-14262682)
chr6 (26-83)||(31895652-31895709)
chr6 (26-83)||(34773365-34773422)
chr6 (122-161)||(4200500-4200539)
chr6 (201-241)||(7052036-7052076)
[»] chr5 (35 HSPs)
chr5 (26-221)||(6460791-6460989)
chr5 (26-190)||(21147066-21147230)
chr5 (26-190)||(33656084-33656250)
chr5 (26-190)||(27458993-27459156)
chr5 (26-190)||(32157940-32158105)
chr5 (26-190)||(5272962-5273126)
chr5 (105-190)||(849224-849310)
chr5 (26-190)||(7016782-7016946)
chr5 (26-181)||(14465279-14465434)
chr5 (26-190)||(139272-139436)
chr5 (26-182)||(1152154-1152310)
chr5 (106-182)||(13926009-13926086)
chr5 (26-161)||(4240525-4240659)
chr5 (106-182)||(4550308-4550385)
chr5 (106-182)||(14000156-14000233)
chr5 (27-182)||(7947624-7947779)
chr5 (106-182)||(39852423-39852500)
chr5 (106-161)||(5949186-5949241)
chr5 (109-161)||(1461211-1461263)
chr5 (26-83)||(5273111-5273168)
chr5 (21-158)||(9220783-9220919)
chr5 (109-173)||(22746378-22746443)
chr5 (26-158)||(37013913-37014044)
chr5 (19-83)||(40013894-40013958)
chr5 (26-157)||(40013779-40013909)
chr5 (65-191)||(9689696-9689821)
chr5 (29-83)||(1152295-1152349)
chr5 (29-83)||(13925891-13925945)
chr5 (190-232)||(33656024-33656066)
chr5 (26-91)||(1461280-1461345)
chr5 (26-83)||(4550449-4550506)
chr5 (26-83)||(14000297-14000354)
chr5 (46-91)||(16894044-16894089)
chr5 (26-83)||(37013871-37013928)
chr5 (193-237)||(9689841-9689885)
[»] chr4 (70 HSPs)
chr4 (26-190)||(41881126-41881291)
chr4 (26-190)||(32950880-32951044)
chr4 (26-184)||(37046501-37046660)
chr4 (26-190)||(7007372-7007536)
chr4 (26-190)||(12112943-12113107)
chr4 (26-190)||(25331129-25331293)
chr4 (26-190)||(39479399-39479565)
chr4 (26-190)||(3436591-3436755)
chr4 (26-190)||(19740952-19741116)
chr4 (26-190)||(28541696-28541860)
chr4 (26-190)||(55302841-55303005)
chr4 (26-190)||(1112891-1113055)
chr4 (106-190)||(7249809-7249894)
chr4 (26-190)||(9163074-9163238)
chr4 (26-190)||(22202013-22202177)
chr4 (26-190)||(23464953-23465117)
chr4 (26-190)||(25446049-25446212)
chr4 (26-190)||(1044807-1044969)
chr4 (26-182)||(5441402-5441558)
chr4 (26-182)||(27768054-27768210)
chr4 (106-190)||(41320887-41320972)
chr4 (26-182)||(54341142-54341298)
chr4 (106-191)||(42786761-42786847)
chr4 (105-190)||(44770897-44770983)
chr4 (26-190)||(46635692-46635850)
chr4 (18-182)||(32322081-32322245)
chr4 (26-190)||(34228627-34228791)
chr4 (106-182)||(37828454-37828531)
chr4 (106-182)||(37915904-37915981)
chr4 (26-182)||(51320919-51321075)
chr4 (26-177)||(25504696-25504847)
chr4 (106-182)||(48261204-48261281)
chr4 (26-182)||(54853520-54853676)
chr4 (106-161)||(23987291-23987346)
chr4 (105-190)||(28371000-28371086)
chr4 (122-190)||(24131026-24131095)
chr4 (26-91)||(24131115-24131180)
chr4 (26-190)||(39307297-39307461)
chr4 (106-189)||(27454123-27454207)
chr4 (26-158)||(30967376-30967507)
chr4 (26-158)||(32684065-32684195)
chr4 (40-170)||(29649731-29649861)
chr4 (29-190)||(30009721-30009882)
chr4 (26-179)||(53275837-53275990)
chr4 (106-158)||(31314809-31314861)
chr4 (106-158)||(49834890-49834942)
chr4 (26-170)||(40537214-40537353)
chr4 (105-158)||(12913300-12913353)
chr4 (26-83)||(27768012-27768069)
chr4 (105-158)||(56445422-56445475)
chr4 (106-158)||(5800055-5800107)
chr4 (106-158)||(28483976-28484028)
chr4 (26-82)||(37915783-37915839)
chr4 (106-161)||(36479305-36479360)
chr4 (26-83)||(5441360-5441417)
chr4 (26-87)||(11090347-11090408)
chr4 (26-91)||(20021342-20021407)
chr4 (26-83)||(30967492-30967549)
chr4 (26-83)||(51320877-51320934)
chr4 (109-182)||(41725205-41725276)
chr4 (110-158)||(49501588-49501636)
chr4 (110-158)||(49507653-49507701)
chr4 (132-190)||(20021436-20021495)
chr4 (141-190)||(8711978-8712028)
chr4 (141-190)||(24736447-24736497)
chr4 (26-80)||(37915741-37915795)
chr4 (26-83)||(54341100-54341157)
chr4 (26-83)||(54853661-54853718)
chr4 (19-83)||(41725074-41725138)
chr4 (106-150)||(50018328-50018372)
[»] chr3 (74 HSPs)
chr3 (26-190)||(3999689-3999853)
chr3 (26-190)||(19253825-19253989)
chr3 (26-190)||(20498207-20498371)
chr3 (26-190)||(33807842-33808007)
chr3 (26-190)||(33996585-33996749)
chr3 (26-190)||(10139190-10139354)
chr3 (26-190)||(51699524-51699687)
chr3 (26-189)||(40246842-40247005)
chr3 (26-190)||(996130-996294)
chr3 (26-190)||(37820521-37820685)
chr3 (18-182)||(52618017-52618181)
chr3 (106-190)||(3206249-3206334)
chr3 (26-190)||(29030004-29030167)
chr3 (26-190)||(35337733-35337897)
chr3 (26-182)||(40897142-40897298)
chr3 (26-182)||(44906565-44906721)
chr3 (26-190)||(53929172-53929336)
chr3 (26-190)||(54625590-54625754)
chr3 (26-180)||(1440006-1440161)
chr3 (26-189)||(25418364-25418527)
chr3 (26-190)||(6589562-6589726)
chr3 (26-190)||(29448902-29449066)
chr3 (26-190)||(44762081-44762245)
chr3 (26-190)||(52114526-52114691)
chr3 (27-182)||(26107260-26107415)
chr3 (26-182)||(17946286-17946442)
chr3 (106-182)||(18749689-18749766)
chr3 (106-190)||(22057839-22057924)
chr3 (26-182)||(34484082-34484238)
chr3 (26-182)||(36674182-36674338)
chr3 (26-182)||(48379155-48379311)
chr3 (26-182)||(54628841-54628998)
chr3 (105-184)||(5825138-5825218)
chr3 (26-176)||(51737784-51737935)
chr3 (109-190)||(6035097-6035179)
chr3 (26-182)||(31646336-31646492)
chr3 (106-182)||(32580253-32580330)
chr3 (106-182)||(50903292-50903369)
chr3 (26-158)||(23753463-23753594)
chr3 (29-175)||(20832993-20833139)
chr3 (26-176)||(52810376-52810526)
chr3 (106-182)||(11431603-11431680)
chr3 (131-181)||(1439947-1439998)
chr3 (106-161)||(10660612-10660667)
chr3 (26-161)||(10728715-10728849)
chr3 (26-161)||(39038038-39038172)
chr3 (106-158)||(27899421-27899473)
chr3 (109-190)||(55235264-55235347)
chr3 (106-161)||(539478-539533)
chr3 (26-88)||(6131317-6131379)
chr3 (109-159)||(39842560-39842610)
chr3 (26-150)||(37454859-37454982)
chr3 (106-158)||(52080004-52080056)
chr3 (26-83)||(10660491-10660548)
chr3 (26-83)||(36674323-36674380)
chr3 (26-81)||(6131366-6131421)
chr3 (106-161)||(50762124-50762179)
chr3 (190-232)||(6131217-6131259)
chr3 (26-88)||(10660533-10660595)
chr3 (106-156)||(23535890-23535940)
chr3 (26-91)||(6035196-6035261)
chr3 (26-83)||(11431482-11431539)
chr3 (26-91)||(12103627-12103692)
chr3 (26-83)||(18749526-18749583)
chr3 (26-91)||(18749568-18749633)
chr3 (26-83)||(23753579-23753636)
chr3 (26-83)||(27240436-27240493)
chr3 (26-83)||(40897100-40897157)
chr3 (26-83)||(44906706-44906763)
chr3 (26-83)||(50762243-50762300)
chr3 (26-83)||(50903436-50903493)
chr3 (26-83)||(54628799-54628856)
chr3 (151-190)||(6131277-6131317)
chr3 (105-158)||(44276465-44276514)
[»] chr2 (43 HSPs)
chr2 (26-190)||(14198623-14198787)
chr2 (26-190)||(24776355-24776519)
chr2 (26-190)||(16269691-16269855)
chr2 (26-190)||(20605236-20605400)
chr2 (26-190)||(31170670-31170834)
chr2 (26-190)||(12407380-12407544)
chr2 (26-190)||(35317062-35317226)
chr2 (26-190)||(44765775-44765939)
chr2 (26-190)||(43847646-43847810)
chr2 (26-190)||(1789442-1789606)
chr2 (26-190)||(5093093-5093257)
chr2 (26-182)||(10657406-10657562)
chr2 (26-190)||(22551809-22551973)
chr2 (26-182)||(28844555-28844711)
chr2 (26-190)||(305511-305675)
chr2 (26-182)||(25288159-25288315)
chr2 (106-190)||(32125332-32125417)
chr2 (26-182)||(33135623-33135779)
chr2 (26-170)||(28740349-28740493)
chr2 (109-190)||(9120208-9120290)
chr2 (106-182)||(18177346-18177423)
chr2 (106-182)||(26788865-26788942)
chr2 (26-161)||(7026604-7026738)
chr2 (26-83)||(20605152-20605209)
chr2 (105-168)||(379015-379079)
chr2 (26-158)||(3574847-3574978)
chr2 (26-158)||(13833501-13833632)
chr2 (29-158)||(6224626-6224755)
chr2 (29-158)||(26601279-26601407)
chr2 (117-182)||(43078653-43078719)
chr2 (26-83)||(7026562-7026619)
chr2 (26-83)||(10125487-10125544)
chr2 (26-83)||(26788742-26788799)
chr2 (26-83)||(32125250-32125307)
chr2 (26-83)||(33135581-33135638)
chr2 (106-161)||(3463751-3463806)
chr2 (26-80)||(3574805-3574859)
chr2 (26-88)||(18177267-18177329)
chr2 (190-232)||(24776537-24776579)
chr2 (26-88)||(26788784-26788846)
chr2 (26-83)||(215420-215477)
chr2 (109-150)||(10125377-10125418)
chr2 (26-83)||(28844513-28844570)
[»] scaffold0004 (1 HSPs)
scaffold0004 (26-190)||(102092-102258)
[»] scaffold0037 (1 HSPs)
scaffold0037 (26-190)||(100210-100374)
[»] scaffold0113 (1 HSPs)
scaffold0113 (26-189)||(38940-39103)
[»] scaffold0276 (1 HSPs)
scaffold0276 (26-189)||(584-747)
[»] scaffold0151 (1 HSPs)
scaffold0151 (106-190)||(38649-38733)
[»] scaffold0042 (1 HSPs)
scaffold0042 (106-181)||(58129-58205)
[»] scaffold1504 (2 HSPs)
scaffold1504 (26-182)||(862-1018)
scaffold1504 (26-83)||(820-877)
[»] scaffold0110 (2 HSPs)
scaffold0110 (106-182)||(39669-39746)
scaffold0110 (26-83)||(39810-39867)
[»] scaffold0054 (1 HSPs)
scaffold0054 (107-182)||(36959-37035)
[»] scaffold0306 (1 HSPs)
scaffold0306 (26-161)||(13881-14015)
[»] scaffold0152 (1 HSPs)
scaffold0152 (26-161)||(21312-21446)
[»] scaffold0543 (2 HSPs)
scaffold0543 (106-182)||(10638-10715)
scaffold0543 (26-83)||(10517-10574)
[»] scaffold0922 (2 HSPs)
scaffold0922 (106-161)||(4278-4333)
scaffold0922 (26-83)||(4157-4214)
[»] scaffold0839 (1 HSPs)
scaffold0839 (130-182)||(3744-3797)
[»] scaffold0007 (1 HSPs)
scaffold0007 (108-184)||(199905-199982)


Alignment Details
Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 232
Target Start/End: Original strand, 730140 - 730350
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  730140 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaa 730239  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt---atgaaaaaataagatttcttaggattgttttt 221  Q
    ||| ||| | |||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||   ||||||| || |||||||||||| || |||||    
T  730240 atttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaacatgagatttcttaggttttttttt 730339  T
Q  222 ccttttaagat 232  Q
    |||||||||||    
T  730340 ccttttaagat 730350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 49198476 - 49198313
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||| |||||||         ||   ||||||||||||||| ||||    
T  49198476 ttcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcag-tggtattcaaaatcattcaa 49198379  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  49198378 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 49198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 19452016 - 19451852
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||| ||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  19452016 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 19451918  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  19451917 atttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 19451852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 21222139 - 21222303
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||    |||||||||||||| ||||    
T  21222139 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagaggtattcaaaatcattcaa 21222237  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  21222238 atttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaatttta 21222303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 28824580 - 28824417
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         || | ||||||||||||||| ||||    
T  28824580 ttcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaacagtcttgtggtattcaaaatcattcaa 28824482  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||    
T  28824481 atttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaatttta 28824417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 35679336 - 35679172
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||| | |||| ||||||||||||||||||| |||||||         || | ||||||||||||||| ||||    
T  35679336 ttcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcactt-aaaaaaagtcatgtggtattcaaaatcattcaa 35679238  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||  ||||||||||||||||| |||||    
T  35679237 atttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaatttta 35679172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 50192759 - 50192594
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  ||||||||| | |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  50192759 ttcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaa 50192660  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  50192659 attttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 50192594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 35279664 - 35279822
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||||| || |||||||         ||   ||||||||||||||| | ||    
T  35279664 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcactt-aaaaaaagtctagtggtattcaaaatcatttaa 35279762  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaa 184  Q
    ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  35279763 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaa 35279822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 6304461 - 6304296
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaaga-ctcttcatcacttcnnnnnnnntcctatggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||| ||| | ||||| |||||||         ||   ||||||||||||||| |||    
T  6304461 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattca 6304363  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  6304362 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 6304296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 45760218 - 45760053
Alignment:
Q  26 ttcaatcaagattttttgtca-tttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactca 124  Q
    ||||||||||||| ||||||| ||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| |||    
T  45760218 ttcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattca 45760120  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    || | |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  45760119 aacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 45760053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 45535936 - 45536100
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| ||| ||||||||||||  ||||| |||| ||||||||||||||||||| ||| |||         ||   ||||||||||||||| ||||    
T  45535936 ttcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgctt-aaaaaaagtctagtggtattcaaaatcattcaa 45536034  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  45536035 atttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 45536100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 47654560 - 47654395
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| | |||| |||| |||||||||||| |||||| |||||||         ||   ||||||||||||| | ||||    
T  47654560 ttcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaa 47654461  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||| |||||    
T  47654460 atttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaatttta 47654395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 29396596 - 29396440
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  29396596 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 29396498  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  29396497 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 29396440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 49418076 - 49418240
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  ||||||||||| |||| || ||| ||||||||| ||||||||| |||||||         ||   ||||||||||||||| ||||    
T  49418076 ttcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 49418174  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| | |||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  49418175 atttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaatttta 49418240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 51701572 - 51701728
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  51701572 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 51701670  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  51701671 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 51701728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 28387601 - 28387446
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||| ||| ||||    
T  28387601 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaaatcttgtggtattcaaattcattcaa 28387503  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagt 181  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  28387502 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagt 28387446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 6312645 - 6312722
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  6312645 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 6312722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 31572326 - 31572241
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| | ||||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  31572326 tggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaatttta 31572241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 46328034 - 46328190
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         ||   ||||||||||||||| ||||    
T  46328034 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-acaaaaagtctcgtggtattcaaaatcattcaa 46328132  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||||||||||||||| |||| ||||||||| |||||||||||||||| |||||    
T  46328133 atttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtg 46328190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 47780703 - 47780867
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| | |||||||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   || |||||||||||| ||||    
T  47780703 ttcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtgatattcaaaatcattcaa 47780801  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    | |   |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  47780802 aattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 47780867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 48524311 - 48524475
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||||||||||||||| |||| |  ||| ||||| |||||| |||||| |||||||         || | || |||||||||||| ||||    
T  48524311 ttcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcactt-aaaaaaagtcttgtgatattcaaaatcattcaa 48524409  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||| ||||||||||||||| || ||||||| |||||||||||||||||||||||| |||||    
T  48524410 attttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaatttta 48524475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 9577558 - 9577476
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||| |||||||  |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||    
T  9577558 tattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaatttta 9577476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 29556178 - 29556260
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||| ||||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||| |||| |||||    
T  29556178 tattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaatttta 29556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 32589082 - 32588997
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| |||||||  |||||||||||||||||||  ||||||||| ||||||||| |||||||||||||| |||||    
T  32589082 tggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaatttta 32588997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 48177591 - 48177514
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  48177591 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtg 48177514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 25612228 - 25612304
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagt 181  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  25612228 tggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagt 25612304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 9322708 - 9322552
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||| ||||||||| ||||||| ||         |||| ||||||||||||||| ||||    
T  9322708 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcattt-aaaaaaagtcctgtggtattcaaaatcattcaa 9322610  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||  ||||||||||||||||||||  |||||||| |||||| ||||||||| |||||    
T  9322609 atttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtg 9322552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 15835182 - 15835105
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||| ||||||||| |||||| ||||||||| |||||    
T  15835182 tggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtg 15835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 18798483 - 18798614
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  18798483 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 18798581  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| ||||||||||||||||||||| |||||||    
T  18798582 atttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 38536297 - 38536163
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | ||||||||||  |||||||||||||||| ||||| ||||         || | ||||||||||||| | ||||    
T  38536297 ttcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattactt-aacaaaagtcttgtggtattcaaaattattcaa 38536199  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| | ||||||||||||||||||| ||||||||||    
T  38536198 atttcaaaggattgtttaataaattggattttgatg 38536163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 38558515 - 38558381
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | ||||||||||  |||||||||||||||| ||||| ||||         || | ||||||||||||| | ||||    
T  38558515 ttcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattactt-aacaaaagtcttgtggtattcaaaattattcaa 38558417  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| | ||||||||||||||||||| ||||||||||    
T  38558416 atttcaaaggattgtttaataaattggattttgatg 38558381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 49230878 - 49231008
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  49230878 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 49230976  T
Q  126 attccgaaggattgtttaataaattagatttt 157  Q
    ||| ||||||||| ||||||||||| ||||||    
T  49230977 atttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 953811 - 953876
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||| |||||||||||| |||||||    
T  953811 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 22183362 - 22183427
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||| |||| |||||||    
T  22183362 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcactt 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 29219357 - 29219412
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||||    
T  29219357 tggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatg 29219412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 37014766 - 37014684
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||| ||||||| | || |||||||| |||||||  |||||||| |||||||| ||||||||||||||| |||||    
T  37014766 tattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaatttta 37014684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 955823 - 955876
Alignment:
Q  108 gtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||| ||||||| |||||| ||||||||||||| |||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatg 955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 51085866 - 51085951
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||||||||||||| | |||||||  |||||||| || |||||||| |||||||||| ||||||||| ||||||| ||||| |||||    
T  51085866 tggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 6312524 - 6312581
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| ||||||||||| ||||||||| |||||||||    
T  6312524 ttcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaattaagactctt 6312581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 8141336 - 8141271
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||    
T  8141336 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcactt 8141271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 8141378 - 8141321
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| ||||||||||| |||||||||||||||||||    
T  8141378 ttcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctt 8141321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 15835303 - 15835246
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  15835303 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 15835246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 25612107 - 25612164
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  25612107 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 25612164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 33025584 - 33025636
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| |||||||  |||||||||||||||| || ||||||||    
T  33025584 tggtattcaaaatcattcaaattttgaaggattgtttaatacatcagattttg 33025636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 47784372 - 47784436
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    |||||| ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  47784372 tgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctt 47784436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 48668904 - 48668852
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||| | ||||||| |||| |||||||||||||||| |||||||    
T  48668904 tggtattcaaaattattcaaatttcgaaagattgtttaataaattggattttg 48668852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 5495304 - 5495239
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    |||||| |||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||    
T  5495304 ttcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 5495239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 9322750 - 9322693
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| ||||  ||||| |||||||||||||||||||    
T  9322750 ttcaatcaagactttttgcaatttaaaaaaaaatttgtggtattcaatcaagactctt 9322693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 18798441 - 18798498
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  18798441 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 18798498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 29556096 - 29556161
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    |||||| ||||||  |||| |||||| |||||| ||||  |||||||||||||||||| |||||||    
T  29556096 ttcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcactt 29556161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 49230836 - 49230893
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  49230836 ttcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctt 49230893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 51701530 - 51701587
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| || ||| |||| |||||||||||||||||||    
T  51701530 ttcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctt 51701587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 5495225 - 5495173
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| | ||||| | ||||||| ||||||||||| |||||||    
T  5495225 tggtattcaaaatcatttaaatttcaaaggattatttaataaattggattttg 5495173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29219238 - 29219294
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactct 82  Q
    ||||||||||| ||||||  | |||| |||||| |||| ||||||||||||||||||    
T  29219238 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactct 29219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 48668987 - 48668931
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatca 75  Q
    |||||| ||||||||||| | |||||||||| | ||||||||||  |||||||||||    
T  48668987 tgtgatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatca 48668931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 15241 - 15077
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  15241 ttcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 15143  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  15142 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 15077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 15884 - 15720
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  15884 ttcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 15786  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  15785 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 15720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 26374637 - 26374473
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  26374637 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 26374539  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  26374538 atttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 26374473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 42938324 - 42938160
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  42938324 ttcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 42938226  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  42938225 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 42938160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 5576828 - 5576663
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  5576828 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaa 5576729  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| ||||| |||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  5576728 atttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaatttta 5576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 24502020 - 24501856
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| ||| |||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  24502020 ttcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 24501922  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  24501921 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 24501856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 42937352 - 42937514
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||||||  ||||||| |||||||         ||   ||||||||||||||| ||||    
T  42937352 ttcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 42937448  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  42937449 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 42937514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 2705026 - 2704869
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  2705026 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 2704928  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtga 183  Q
    ||| |||| ||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  2704927 atttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtga 2704869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 7507106 - 7506942
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||| |||||  |||||||||||||||||| |||| ||||||||||||||||||| |||||||         ||   |||||||||||| || ||||    
T  7507106 ttcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaaccattcaa 7507008  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  7507007 attttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7506942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 42735484 - 42735320
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| ||| |||||||| |||||  |||| ||||||||| ||||||||| |||||||         ||   ||||||||||||||| ||||    
T  42735484 ttcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 42735386  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  42735385 atttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 42735320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 10392444 - 10392280
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||| | |||| | ||||  ||||||||||||||| || |||||||         ||   ||||||||| ||||| ||||    
T  10392444 ttcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcactt-aagaaaagtctagtggtattcagaatcattcaa 10392346  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  10392345 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 10392280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 9288671 - 9288508
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaat 118  Q
    |||||| ||||||||||| | |||||||||| | |||||| |||  |||||||||||| | | ||||||||||         || | |||||||||||||    
T  9288671 tgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcactt-aaaaaaagtcttgtggtattcaaaat 9288573  T
Q  119 cactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtg 182  Q
    || ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  9288572 cattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtg 9288508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 23115375 - 23115213
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||| || |||| ||||||||||||||||||| |||||||         ||   ||||||||||| ||| ||||    
T  23115375 ttcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaa-tcattcaa 23115278  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt 189  Q
    |||  ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||    
T  23115277 atttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaatttt 23115213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 41479096 - 41479227
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||  |||||||||||||||| ||||    
T  41479096 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctaatggtattcaaaatcattcaa 41479194  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| |||| ||||||||||||||| ||||||||    
T  41479195 atttcgaatgattgtttaataaatcagattttg 41479227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 43166897 - 43166747
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||  ||| ||         || | ||||||||||||||| ||||    
T  43166897 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattt-taaaaaagtcttgtggtattcaaaatcattcaa 43166799  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggatttt 176  Q
    ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  43166798 atttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 43166747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 26856065 - 26856222
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagt-tttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactca 124  Q
    ||||||||||| | |||||||||| | |||||| ||||  |||||||||||||||| ||||||||||         || | ||||||||||||||| |||    
T  26856065 ttcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattca 26856163  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||| ||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  26856164 aatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtg 26856222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 14782342 - 14782186
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  14782342 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 14782244  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  14782243 attttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 14782186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 44726017 - 44725861
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  44726017 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 44725919  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  44725918 attttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 44725861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 32711489 - 32711358
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| | ||    
T  32711489 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcatttaa 32711391  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| |||||||||||||||||||| ||||||||    
T  32711390 atttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 10295588 - 10295431
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | || |||| |||| |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  10295588 ttcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 10295490  T
Q  126 attccgaaggattgtttaataaattagattttgatg--attttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||||   |||||||||||||| |||||    
T  10295489 atttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtg 10295431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 4403185 - 4403262
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||| |||||    
T  4403185 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtg 4403262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 18958855 - 18958778
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||| || |||||||||||||||| |||||    
T  18958855 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtg 18958778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 19718088 - 19717932
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  19718088 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 19717990  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||| ||||||||||||||| |||||| || |||||||||||||||| |||||    
T  19717989 atttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtg 19717932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 39467675 - 39467519
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  39467675 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 39467577  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||||||||||||||||||||  |||||||| |||||| ||||||||| |||||    
T  39467576 atttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtg 39467519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 31623694 - 31623825
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  31623694 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 31623792  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| ||||||||||||||||||||| |||||||    
T  31623793 atttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 43959657 - 43959800
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||| | |||||| |||| |||||||||||||| |||| ||||||||          ||| ||||||||||||||| |||    
T  43959657 ttcaatcaagattctttgtcattttaaaaaagtcttgt-gtattcaatcaagattcttaatcacttcaaaaaaga--ctagtggtattcaaaatcattca 43959753  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgg 170  Q
    |||| |||| ||||||||||||||| |||||||||| ||||||||||    
T  43959754 aatttcgaatgattgtttaataaatcagattttgatggattttgtgg 43959800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 16362188 - 16362329
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaat 118  Q
    |||||| ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||| ||||         ||   |||||||||||||    
T  16362188 tgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattactt-aaaaaaagtctcgtggtattcaaaat 16362286  T
Q  119 cactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    || ||||||| ||||||||||||||||||||| ||||||||||    
T  16362287 cattcaaatttcgaaggattgtttaataaattggattttgatg 16362329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 4031465 - 4031334
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||| | ||         || | ||||||||||||||| ||||    
T  4031465 ttcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaatt-aaaaaaagtcttgtggtattcaaaatcattcaa 4031367  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| ||||||||||||||||||||| |||||||    
T  4031366 atttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 4950143 - 4950059
Alignment:
Q  107 ggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||||| |||| || | || |||| ||||||||||||||||||||| || ||||||| ||||||||||||| |||||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaatttta 4950059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 18306168 - 18306037
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  18306168 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 18306070  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| |||| |||||||||||||||| |||||||    
T  18306069 atttcgaaagattgtttaataaattggattttg 18306037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 32497524 - 32497655
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| | | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  32497524 ttcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 32497622  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| |||| |||||||||||||||| |||||||    
T  32497623 atttcgaatgattgtttaataaattggattttg 32497655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 8410528 - 8410455
Alignment:
Q  104 tatggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggatttt 176  Q
    ||||||||||||||||| | |||||  ||||||||||||| |||||| || |||||| ||||||||||||||||    
T  8410528 tatggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 7466334 - 7466465
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| |||||| |||         || | ||||||||||||||| ||||    
T  7466334 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgctt-aaaaaaagtcttgtggtattcaaaatcattcaa 7466432  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    |||  |||| ||||||||||||||| |||||||    
T  7466433 attttgaagaattgtttaataaattggattttg 7466465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 42306041 - 42305977
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    |||||| ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  42306041 tgtgatattcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 42305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 42305992 - 42305862
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||| | ||||    
T  42305992 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaaatcttgtggtattcaaaataattcaa 42305894  T
Q  126 attccgaaggattgtttaataaattagatttt 157  Q
    ||| |||||||||||||||| |||| ||||||    
T  42305893 atttcgaaggattgtttaatcaattggatttt 42305862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 18958976 - 18958914
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatca 88  Q
    ||||||||||| ||||||  |||||| |||||| |||| ||||||||||||||||||| ||||    
T  18958976 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttatca 18958914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 13478376 - 13478307
Alignment:
Q  108 gtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggatttt 176  Q
    ||||||||||||  | ||||| ||||||||||||||||||||||||||| | | |||||||| |||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggatttt 13478307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 14782384 - 14782327
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  14782384 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 14782327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 19718130 - 19718073
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  19718130 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 19718073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 39189940 - 39189860
Alignment:
Q  108 gtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaatttt 188  Q
    |||||||| |||| ||||||| ||||||||||||||||||||| || |||||| |||||||  | |||||||||| ||||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttgatgaattttctagtaaatttt 39189860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 41069938 - 41070003
Alignment:
Q  21 tgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcat 86  Q
    |||| ||||||||||| |||  ||||||||  ||||||||||| |||||||| |||||||||||||    
T  41069938 tgatattcaatcaagactttacgtcatttataaaaagttttgtggtattcaaccaagactcttcat 41070003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 44726059 - 44726002
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  44726059 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 44726002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 37857197 - 37857252
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||| ||| |||||||   ||||||||||||||||||| ||||||||||    
T  37857197 tggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatg 37857252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 7466292 - 7466349
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  7466292 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 7466349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 10295630 - 10295565
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||| ||||||  | ||||||||||| || | | |||||||||||||||||| ||||||    
T  10295630 ttcaatcaagactttttgcaacttaagaaaagtcttctggcattcaatcaagactcttcgtcactt 10295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 18306210 - 18306153
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  18306210 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 18306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 34695273 - 34695437
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||| |||||||         |||  |||||||||||| || ||||    
T  34695273 ttcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcactt-aaaaaaagtccagtggtattcaaaaccattcaa 34695371  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  34695372 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 34695437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 43581297 - 43581133
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  43581297 ttcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 43581199  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  43581198 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 43581133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 973184 - 973348
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         |  || ||||||||||||||| |||    
T  973184 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatt--tagtggtattcaaaatcattca 973281  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  973282 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 973348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 20275470 - 20275306
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  ||||||||||| |||||| || | ||||||||||||||||||| |||||||         || ||||||||||||||||| ||||    
T  20275470 ttcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcactt-aaaaaaagtcttatggtattcaaaatcattcaa 20275372  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  20275371 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 20275306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 30440796 - 30440960
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||| | |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  30440796 ttcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 30440894  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  30440895 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 30440960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 9179873 - 9180027
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||         || | |||||| |||||||||| ||    
T  9179873 ttcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcactt-aaaaaaagtcttgtggtatacaaaatcacttaa 9179971  T
Q  126 attccgaaggattgtttaataaattagattttgatgattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||    
T  9179972 attccgaaggattgtttaataaattggatt---------ttgtgggattttctagtgaattttta 9180027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 7719467 - 7719303
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| ||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  7719467 ttcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaaatctagtggtattcaaaatcattcaa 7719369  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  7719368 atttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7719303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 12893408 - 12893572
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||| ||||||||||||| |||||||         ||  |||||||||||||||| ||||    
T  12893408 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcactt-aaaaaaagtctaatggtattcaaaatcattcaa 12893506  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| ||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  12893507 atttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaatttta 12893572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 40996856 - 40996692
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| ||| |||         ||   ||||||||||||||| ||||    
T  40996856 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgctt-aaaaaaagtctagtggtattcaaaatcattcaa 40996758  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||    
T  40996757 atttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaatttta 40996692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 47914266 - 47914430
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   || |||||||||||| ||||    
T  47914266 ttcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtgatattcaaaatcattcaa 47914364  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  47914365 atttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 47914430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 34009012 - 34009166
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||||| |||||||         ||||| ||||||||||||||| |||    
T  34009012 ttcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcactt-aaaaaaagtcctagtggtattcaaaatcattca 34009110  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttcta 179  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  34009111 aatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttcta 34009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 44343603 - 44343439
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||||| ||||  |||||||||||||||||| |||||||         |  || ||||||| ||||||| |||    
T  44343603 ttcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtt--tagtggtatttaaaatcattca 44343506  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  44343505 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 44343439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 3022919 - 3023075
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| |||||||||||| | |||||| |||  |||||||||||||| | ||||||||||         || | ||||||||||||||| ||||    
T  3022919 ttcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 3023017  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  3023018 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 3023075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 7718549 - 7718405
Alignment:
Q  46 atttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaattccgaaggattgtttaat 145  Q
    |||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||||| ||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat 7718451  T
Q  146 aaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||    
T  7718450 aaatcagattttgatggattttgtgggattttctagtgaaatttta 7718405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 12963773 - 12963858
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  12963773 tggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 12963858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 18914942 - 18914778
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| ||| |||||| ||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  18914942 ttcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 18914844  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| | |||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  18914843 atttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 18914778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 43679493 - 43679578
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  43679493 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 43679578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 190
Target Start/End: Complemental strand, 32143115 - 32142960
Alignment:
Q  37 ttttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnn-tcctatggtattcaaaatcactcaaattccgaagg 135  Q
    ||||||||||||||| |||||| || | ||||| ||||||||||||| ||||||||         ||   ||||||||||||||| |||||||  |||||    
T  32143115 ttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaaaatcattcaaattttgaagg 32143016  T
Q  136 attgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  32143015 attgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 32142960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 9882443 - 9882287
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  9882443 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 9882345  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||| |||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  9882344 atttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtg 9882287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 10068539 - 10068624
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  10068539 tggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaatttta 10068624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 23101291 - 23101447
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  23101291 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 23101389  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  23101390 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 23101447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 33382630 - 33382786
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         ||  |||||||||||||||| | ||    
T  33382630 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtctcatggtattcaaaatcatttaa 33382728  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  33382729 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 33382786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 47879168 - 47879332
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   || |||||||||||| ||||    
T  47879168 ttcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtgatattcaaaatcattcaa 47879266  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||   |||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||    
T  47879267 atttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 47879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 28035012 - 28034856
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| |||||||||||| | |||||| |||   ||||||||||||||| ||||||||||         || | ||||||||||||| | ||||    
T  28035012 ttcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaattattcaa 28034914  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| | ||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  28034913 atttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 28034856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 28342419 - 28342496
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  28342419 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 28342496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 29614971 - 29614815
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | || |||||||||||| ||||    
T  29614971 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtgatattcaaaatcattcaa 29614873  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  29614872 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 29614815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 39784092 - 39784248
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| | ||    
T  39784092 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcatttaa 39784190  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  39784191 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 39784248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 7718490 - 7718344
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta-------------- 190  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||                  
T  7718490 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatct 7718391  T
Q  191 ----tgaaaaaataagatttcttaggattgtttttccttttaagata 233  Q
        |||||| || ||||||||||||||||||||| |||||||||||    
T  7718390 ttcatgaaaacatgagatttcttaggattgttttttcttttaagata 7718344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 44122107 - 44121973
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  44122107 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaaatcttgtggtattcaaaatcattcaa 44122009  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| ||||||||||||||||||||| ||||||||||    
T  44122008 atttcgaaggattgtttaataaattggattttgatg 44121973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 43187486 - 43187400
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    |||||||||||||||| |||||||  |||| ||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||    
T  43187486 atggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaatttta 43187400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 7993135 - 7993291
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||| ||||| | |||||| |||  |||||||||||| ||| ||||||||||         || ||||||||||||||||| ||||    
T  7993135 ttcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt-aaaaaaagtcttatggtattcaaaatcattcaa 7993233  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||||||||||||||||||||  |||||||| |||| ||||||||||| |||||    
T  7993234 atttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtg 7993291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 8675326 - 8675482
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| | | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| | ||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcatttaa 8675424  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    | | ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  8675425 acttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 8675482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 18838461 - 18838538
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  18838461 tggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtg 18838538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 32883775 - 32883931
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| |||||||||||| | |||||| |||  ||||||||| |||||| ||||||||||         || | ||||||||||||||| ||||    
T  32883775 ttcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 32883873  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||| ||||||||| |||||| ||||||||| ||||| |||||||||| |||||    
T  32883874 atttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtg 32883931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 7113531 - 7113606
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctag 180  Q
    ||||||||||||| | ||||||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7113531 tggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctag 7113606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 31638875 - 31639009
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| ||| |||||||||||| |||| || ||| |||||| |||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  31638875 ttcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 31638973  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| |||||||||||||||||||| |||||||||||    
T  31638974 atttcgaaggattgtttaataaatcagattttgatg 31639009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 39219504 - 39219420
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| |||||||  || | |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  39219504 tggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 39219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 3797269 - 3797130
Alignment:
Q  21 tgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatca 120  Q
    |||| ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | |||||||||| ||||    
T  3797269 tgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaagatca 3797171  T
Q  121 ctcaaattccgaaggattgtttaataaattagattttgatg 161  Q
     | |||||  |||||||||||||||||||||||||||||||    
T  3797170 ttaaaattttgaaggattgtttaataaattagattttgatg 3797130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 44623490 - 44623418
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    |||||| ||||||||||| | |||||||||||| |||||| |||| ||||| |||||||||||||||||||||    
T  44623490 tgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactt 44623418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 509649 - 509783
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  509649 ttcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 509747  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| |||| |||||||||||||||| ||||||||||    
T  509748 atttcgaacgattgtttaataaattggattttgatg 509783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 10676546 - 10676463
Alignment:
Q  108 gtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||| |||||| ||| ||||||| ||||| |||||    
T  10676546 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 19251611 - 19251666
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  19251611 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 19251666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 25805764 - 25805838
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttcta 179  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||  ||| |||| |||||||||||||||||||    
T  25805764 tggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttcta 25805838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 40460921 - 40460780
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaat 118  Q
    |||||| |||||| |||| | |||||||||| | |||||| |||   ||||||||||||||| ||||||||||         || | |||||||||||||    
T  40460921 tgtgatattcaattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaat 40460823  T
Q  119 cactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    || ||||||| |||| |||||||||||||||| ||||||||||    
T  40460822 cattcaaatttcgaatgattgtttaataaattggattttgatg 40460780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 12740445 - 12740521
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
T  12740445 tggtattcaaaatcattcaaatttcaaaggattgtttaataaa-tggattttgatagattttgtgggattttatagtg 12740521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 46405638 - 46405494
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||| ||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  46405638 ttcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 46405540  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgg 170  Q
    ||| | || |||||||||||||||| ||||||||| ||||||||||    
T  46405539 atttcaaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 727512 - 727644
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| ||| |||||||||||| |||||| ||||  ||||||||||| |||||| |||||||         ||   | ||||||||||||| ||||    
T  727512 ttcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatcattcaa 727611  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| | |||||||||||||||||| ||||||||    
T  727612 atttcaaaggattgtttaataaatcagattttg 727644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 17001151 - 17001099
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  17001151 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 47066776 - 47066828
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  47066776 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 37327920 - 37328054
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||| ||||         || | ||||||||||||||| ||||    
T  37327920 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattactt-aaaaaaagtcttgtggtattcaaaatcattcaa 37328018  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| | |||||||||||||||||||  |||||||||    
T  37328019 atttcaaaggattgtttaataaattgaattttgatg 37328054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 44256894 - 44256823
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggatttt 176  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||| ||||| |||| ||||||| |||||||    
T  44256894 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggatttt 44256823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 9882485 - 9882428
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| ||||||||||| |||||||||||||||||||    
T  9882485 ttcaatcaagactttttgcaatttaaaaaaagttttgtggtattcaatcaagactctt 9882428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 28342298 - 28342355
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||||||||||  |||||| |||||| |||| |||||||||||||||||||    
T  28342298 ttcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 28342355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 1470361 - 1470289
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatgattttgtgggattttct 178  Q
    ||||||||||||||  |||||||   ||| |||||||||| ||||||||||||||  ||||||||||||||||    
T  1470361 tggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatagttttgtgggattttct 1470289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 33892457 - 33892322
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| | | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  33892457 ttcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaacaaagtcttgtggtattcaaaatcattcaa 33892359  T
Q  126 attccgaaggattgtttaataaattagattttgatga 162  Q
    ||| |||| ||||||| |||||||| |||||| ||||    
T  33892358 atttcgaatgattgttaaataaattggatttttatga 33892322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 29585586 - 29585641
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| |||||||  ||||||||||||||||| || ||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatg 29585641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 39028090 - 39028224
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||   ||||||||||||||| ||||||||||         || | || |||||||||||  ||||    
T  39028090 ttcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcactt-aaaaaaagtcttgtgttattcaaaatcgttcaa 39028188  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| |||| |||||||||||||||| ||||||||||    
T  39028189 attacgaaagattgtttaataaattggattttgatg 39028224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 23101249 - 23101306
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  23101249 ttcaatcaagaatttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 23101306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 29615013 - 29614956
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  29615013 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 29614956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 37972979 - 37972918
Alignment:
Q  122 tcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||| ||||||||| ||||||||||| ||||||||| ||||||| |||||||| |||||    
T  37972979 tcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtg 37972918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 39784050 - 39784107
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  39784050 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 39784107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 10617024 - 10617068
Alignment:
Q  140 tttaataaattagattttgat-gattttgtgggattttctagtga 183  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtga 10617068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 41827401 - 41827445
Alignment:
Q  131 gaaggattgtttaataaattagattttgat-gattttgtgggatt 174  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||    
T  41827401 gaaggattgtttaataaattggattttgatggattttgtgggatt 41827445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 447855 - 447910
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||| ||||||| ||||||| |||| ||||||||||| |||| ||||||||||    
T  447855 tggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatg 447910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 7113456 - 7113503
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaat 73  Q
    |||||| |||||||||| |||||||| ||||||||||| |||||||||    
T  7113456 ttcaattaagattttttatcatttaaaaaaagttttgtggtattcaat 7113503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 8078395 - 8078453
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaa-agttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||||| |||||||||||| ||| | | |||| |||||||||||||||||||    
T  8078395 ttcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagactctt 8078453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 17001272 - 17001215
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  17001272 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 17001215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 19810874 - 19810923
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    |||||||||||| ||||||| | || |||||||||||||||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttg 19810923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 37327878 - 37327935
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  37327878 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 37327935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 48117842 - 48117785
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  48117842 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 48117785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 6197685 - 6197521
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  6197685 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 6197587  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  6197586 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 6197521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 2300945 - 2300781
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||| ||||||| ||||    
T  2300945 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcactt-aaaaaaagtctactggtattgaaaatcattcaa 2300847  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  2300846 atttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 2300781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 7051847 - 7052007
Alignment:
Q  30 atcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaattc 129  Q
    ||||||||| |||||||||||| |||||| |||| |||| ||||||||||||||||||||||         || | || |||||||||||| |||||||     
T  7051847 atcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcactt-aaaaaaagtcgtgtgatattcaaaatcattcaaattt 7051945  T
Q  130 cgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||||| || |||||    
T  7051946 cgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaatttta 7052007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 1391622 - 1391785
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  |||||||||||  ||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  1391622 ttcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 1391720  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt 189  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  1391721 atttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 1391785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 28002663 - 28002827
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||||||||||||||| |||||| || | ||||||||||||||||||| |||||||         ||   || |||||||||||| ||||    
T  28002663 ttcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcactt-aaaaaaagtctagtgatattcaaaatcattcaa 28002761  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||  ||||||||||||| |||||    
T  28002762 atttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaatttta 28002827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 29076596 - 29076761
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||| ||| |||| |||||||         ||   | ||||||||||||| ||||    
T  29076596 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaa 29076695  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||| | ||||||||||||||| |||||    
T  29076696 atttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaatttta 29076761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 31895694 - 31895850
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  31895694 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 31895792  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  31895793 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtg 31895850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 29111569 - 29111735
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||| ||| |||| |||||||           ||| | ||||||||||||| |||    
T  29111569 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattca 29111668  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||| |||||||||||||||||||| |||||||||| |||||| | ||||||||||||||| |||||    
T  29111669 aatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaatttta 29111735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 34773407 - 34773557
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  34773407 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaaatcttgtggtattcaaaatcattcaa 34773505  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggatttt 176  Q
    ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  34773506 atttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 34773557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 34759258 - 34759101
Alignment:
Q  26 ttcaatcaagattttttgtcattt-aagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactca 124  Q
    ||||||||||| | |||||||||| || |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| |||    
T  34759258 ttcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattca 34759160  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||| | ||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  34759159 aatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 34759101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 14262561 - 14262484
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  14262561 tggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 14262484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 7497153 - 7497218
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgg 170  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||| ||||||||||    
T  7497153 tggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgtgg 7497218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 30385185 - 30385133
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  30385185 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 30385133  T

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Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 31067570 - 31067622
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  31067570 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31067622  T

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Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 656955 - 657028
Alignment:
Q  17 aatgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    |||||| | ||||||||||||| |||| ||||||| |||||| |||| ||||||||||||||||||| |||||||    
T  656955 aatgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt 657028  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 14262682 - 14262625
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||||||||||  | |||| |||||| |||| |||||||||||||||||||    
T  14262682 ttcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 14262625  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 31895652 - 31895709
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  31895652 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 31895709  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 34773365 - 34773422
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  34773365 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 34773422  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 4200539 - 4200500
Alignment:
Q  122 tcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  4200539 tcaaatttcgaaggattgtttaataaattggattttgatg 4200500  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 7052036 - 7052076
Alignment:
Q  201 agatttcttaggattgtttttccttttaagatattatctct 241  Q
    ||||||||||| |||||||||||| |||||||| |||||||    
T  7052036 agatttcttagaattgtttttcctgttaagatactatctct 7052076  T

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Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 6460791 - 6460989
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||| |||| ||         ||   ||||||||||||||| ||||    
T  6460791 ttcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcattt-aaaaaaaatctagtggtattcaaaatcattcaa 6460889  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt---atgaaaaaataagatttcttaggattgttttt 221  Q
    ||| |||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||   |||||||||| |||||||||| ||||||||||    
T  6460890 atttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaaatgagatttcttaagattgttttt 6460989  T

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Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 21147066 - 21147230
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  21147066 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 21147164  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  21147165 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 21147230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 33656250 - 33656084
Alignment:
Q  26 ttcaatcaagatt--ttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactc 123  Q
    |||||||||||||  ||||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||  |||||||||||||||| ||    
T  33656250 ttcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaaatctaatggtattcaaaatcattc 33656152  T
Q  124 aaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  33656151 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 33656084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 27459156 - 27458993
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||| |||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| |||     
T  27459156 ttcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactt--aaaaaagtctagtggtattcaaaatcattcag 27459059  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  27459058 attttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 27458993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 32158105 - 32157940
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||| | | |||||||         ||   ||||||||||||||| ||||    
T  32158105 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaa 32158006  T
Q  126 attccgaaggattgtttaataaattagattttga-tgattttgtgggattttctagtgaattttta 190  Q
    ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||    
T  32158005 atttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaatttta 32157940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 5273126 - 5272962
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| || | ||||||||||||||||||| |||| ||         ||   ||||||||||||||| ||||    
T  5273126 ttcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcattt-aaaaaaagtctagtggtattcaaaatcattcaa 5273028  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  5273027 atttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 5272962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 849224 - 849310
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  849224 atggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaatttta 849310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 7016946 - 7016782
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||   |||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  7016946 ttcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 7016848  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  7016847 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7016782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 14465434 - 14465279
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||||| ||||||||| | ||||||||||||||||||||||| |||         || | ||||||||||||||| ||||    
T  14465434 ttcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgctt-aaaaaaagtcttgtggtattcaaaatcattcaa 14465336  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagt 181  Q
    ||| |||| |||||||||||||||  |||||||||| ||||||||| ||||||||||    
T  14465335 atttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 139272 - 139436
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||||||||||| || |||||||         ||   ||||||||||||||| ||||    
T  139272 ttcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 139370  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||  |||||||||| |||||||| |||||||| |||||| |||||    
T  139371 atttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaatttta 139436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 1152310 - 1152154
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| || |||||||         || | ||||||||||||||| ||||    
T  1152310 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 1152212  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  1152211 atttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtg 1152154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 13926009 - 13926086
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  13926009 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 13926086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 4240659 - 4240525
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  4240659 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 4240561  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| ||||||||||||||||||||| ||||||||||    
T  4240560 atttcgaaggattgtttaataaattggattttgatg 4240525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 4550385 - 4550308
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||    
T  4550385 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtg 4550308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 14000233 - 14000156
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  14000233 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 14000156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 7947779 - 7947624
Alignment:
Q  27 tcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaa 126  Q
    |||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || |  | |||||||||||| |||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgcgatattcaaaatcattcaaa 7947681  T
Q  127 ttccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    || ||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||    
T  7947680 tttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtg 7947624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 39852423 - 39852500
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||| ||||||||| |||||| ||||||||| |||||    
T  39852423 tggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtg 39852500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 5949186 - 5949241
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  5949186 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 5949241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 1461263 - 1461211
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  1461263 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 1461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 5273168 - 5273111
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    |||||||||||||||||||||||||| |||||| ||||  ||||||||||||| ||||    
T  5273168 ttcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagattctt 5273111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 9220919 - 9220783
Alignment:
Q  21 tgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatca 120  Q
    |||| ||||||||| | | |||||||||||  |||||| ||||  |||||||||||||||||| |||||||         || |||| ||||||||||||    
T  9220919 tgatattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcactt-aaaaaaagtcttatgatattcaaaatca 9220821  T
Q  121 ctcaaattccgaaggattgtttaataaattagattttg 158  Q
     ||||||| | |||||||||||||| ||||||| ||||    
T  9220820 ttcaaatttctaaggattgtttaatgaattagaatttg 9220783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 22746378 - 22746443
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggat 173  Q
    |||||||||||| ||||||| |||| ||||||||||||||||  |||||||| |||||||||||||    
T  22746378 tattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtgggat 22746443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 37013913 - 37014044
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | ||||||||||   |||||| |||  |||||||||||||||| ||||||||||         || |  |||||||||||||| ||||    
T  37013913 ttcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgcggtattcaaaatcattcaa 37014011  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| |||||| |||||||||||||| |||||||    
T  37014012 atttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 40013958 - 40013894
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    |||||| ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  40013958 tgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 40013894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 40013909 - 40013779
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | || |||||||||||| ||||    
T  40013909 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaaatcttgtgttattcaaaatcattcaa 40013811  T
Q  126 attccgaaggattgtttaataaattagatttt 157  Q
    ||| |||||||||||||||| |||| ||||||    
T  40013810 atttcgaaggattgtttaatcaattggatttt 40013779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 9689696 - 9689821
Alignment:
Q  65 gtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gat 163  Q
    |||||||||||||||||||||||||||         || | ||||||| ||||||| | ||||| |||| |||||||| ||||||||||||||||| |||    
T  9689696 gtattcaatcaagactcttcatcactt-aaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggat 9689793  T
Q  164 tttgtgggattttctagtgaatttttat 191  Q
    | |||| |||||||| || || ||||||    
T  9689794 tgtgtgagattttcttgtaaaattttat 9689821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 1152349 - 1152295
Alignment:
Q  29 aatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    |||||||||||||||  | |||| |||||| |||| |||||||||||||||||||    
T  1152349 aatcaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 1152295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 13925891 - 13925945
Alignment:
Q  29 aatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    |||||||| ||||||  | |||| ||||||||||| |||||||||||||||||||    
T  13925891 aatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctt 13925945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 33656066 - 33656024
Alignment:
Q  190 atgaaaaaataagatttcttaggattgtttttccttttaagat 232  Q
    ||||||| || ||||||||||||||||||||| ||||||||||    
T  33656066 atgaaaatatgagatttcttaggattgttttttcttttaagat 33656024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 1461345 - 1461280
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||| | ||||| |||| | |||||| |||  |||||||||||||||| ||||||||||    
T  1461345 ttcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt 1461280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 4550506 - 4550449
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  4550506 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 4550449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 14000354 - 14000297
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||| | |||| |||||||||||||||||||    
T  14000354 ttcaatcaagactttttgcaatttaaaaaaaatcttgtggtattcaatcaagactctt 14000297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 16894089 - 16894044
Alignment:
Q  46 atttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    |||||| |||||| |||| ||||||||||||||||||| |||||||    
T  16894089 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 37013871 - 37013928
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  37013871 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 37013928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 9689841 - 9689885
Alignment:
Q  193 aaaaaataagatttcttaggattgtttttccttttaagatattat 237  Q
    |||| ||||||||||||| |||||||||| |||||||||| ||||    
T  9689841 aaaacataagatttcttatgattgttttttcttttaagattttat 9689885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 41881291 - 41881126
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         |    ||||||||||||||| ||||    
T  41881291 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaa 41881192  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  41881191 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 41881126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 32951044 - 32950880
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  32951044 ttcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 32950946  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  32950945 atttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaatttta 32950880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 37046660 - 37046501
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||||         ||   || |||| ||||||| ||||    
T  37046660 ttcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaa 37046561  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaa 184  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  37046560 atttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaa 37046501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 7007372 - 7007536
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| | |||||||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  7007372 ttcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 7007470  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  7007471 atttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaatttta 7007536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 12112943 - 12113107
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||||| |||||||         ||  |||||||||||||||| ||||    
T  12112943 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcactt-aaaaaaagtctaatggtattcaaaatcattcaa 12113041  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| ||||||| || |||||||||| ||||||||||||| |||||    
T  12113042 atttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaatttta 12113107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 25331129 - 25331293
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   || |||||||||||| ||||    
T  25331129 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtgatattcaaaatcattcaa 25331227  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  25331228 atttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 25331293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 39479565 - 39479399
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    |||||||||||||  ||||||||||| |||||| |||| ||||||||||||||||||| |||||||           ||  ||||||||||||||| |||    
T  39479565 ttcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattca 39479466  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  39479465 aatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 39479399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 3436591 - 3436755
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||||||||| ||||| |||| | ||||  |||||||||||||||||| |||| ||         ||  |||||||||||||||| ||||    
T  3436591 ttcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcattt-aaaaaaaatctaatggtattcaaaatcattcaa 3436689  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||    
T  3436690 atttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaatttta 3436755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 19741116 - 19740952
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||  ||||||  ||| ||||||| |||||||| || |||||||         || | ||||||| ||||||| ||||    
T  19741116 ttcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcactt-aaaaaaagtcttgtggtattaaaaatcattcaa 19741018  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  19741017 atttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 19740952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 28541696 - 28541860
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| | || ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  28541696 ttcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 28541794  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||    
T  28541795 atttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 28541860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 55302841 - 55303005
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||| | ||||||  ||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  55302841 ttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 55302939  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| |||||    
T  55302940 atttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaatttta 55303005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 1112891 - 1113055
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  1112891 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 1112989  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| | || ||||||||||||||| |||||||||| ||||||||||||||| ||||| || |||||    
T  1112990 atttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaatttta 1113055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 7249894 - 7249809
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  7249894 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 7249809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 9163074 - 9163238
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||||| |||||| |||| |||||||||||||| | |||||||| |         || | || |||||||||||| ||||    
T  9163074 ttcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacat-aaaaaaagtcttgtgatattcaaaatcattcaa 9163172  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||    
T  9163173 atttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaatttta 9163238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 22202013 - 22202177
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| | ||    
T  22202013 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattaaa 22202111  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| | || ||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||    
T  22202112 atttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaatttta 22202177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 23464953 - 23465117
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  ||||||||||| |||||||||||  |||||||||||||||||| |||||||         ||   |||||||||||| || ||||    
T  23464953 ttcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcactt-aaaataagtctagtggtattcaaaaccattcaa 23465051  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| || |||||    
T  23465052 atttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 25446049 - 25446212
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||||| ||||||||| |||| | |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  25446049 ttcaatcaagattttt-gtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 25446146  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  25446147 atttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 25446212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 1044807 - 1044969
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  |||||||||||  ||||| |||| ||||||||||||||||||| |||||||         ||   |||||||||||| || ||||    
T  1044807 ttcaatcaagattccttgtcatttaa--aaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaaccattcaa 1044903  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
     || |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  1044904 ctttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 1044969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 5441402 - 5441558
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  5441402 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 5441500  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  5441501 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 5441558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 27768054 - 27768210
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  27768054 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 27768152  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  27768153 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 27768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 41320887 - 41320972
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||||    
T  41320887 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaatttta 41320972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 54341142 - 54341298
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  54341142 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 54341240  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  54341241 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 54341298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 42786761 - 42786847
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaatttttat 191  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| | |||||||| |||||||||| ||||||||||||| ||||||    
T  42786761 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttat 42786847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 44770983 - 44770897
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||||||| |||||||  |||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||    
T  44770983 atggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaatttta 44770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 46635850 - 46635692
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         |  || | ||||||||||||| |||    
T  46635850 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtt--tagtagtattcaaaatcattca 46635753  T
Q  125 aattccgaaggattgtttaataaattagattttgatgattttgtgggattttctagtgaattttta 190  Q
    |||| |||||||||||||||||||| ||||     ||||||||||||||||| ||||||| |||||    
T  46635752 aatttcgaaggattgtttaataaataagat-----tgattttgtgggattttttagtgaaatttta 46635692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 32322081 - 32322245
Alignment:
Q  18 atgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaa 117  Q
    ||||||| || |||||||| | |||||||||| | |||||| |||  |||||||||||||| | ||||||||||         || | ||||||||||||    
T  32322081 atgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactt-aaaaatagtcttgtggtattcaaaa 32322179  T
Q  118 tcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||| |||||||||||||||||||||  |||||||| |||||||||||||||| |||||    
T  32322180 tcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtg 32322245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 34228791 - 34228627
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||||||| | |||| |||||||         ||   ||||||||||||||| | ||    
T  34228791 ttcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcactt-aaaaaaagtctagtggtattcaaaatcattgaa 34228693  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||    
T  34228692 atttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaatttta 34228627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 37828531 - 37828454
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  37828531 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 37828454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 37915904 - 37915981
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  37915904 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 37915981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 51320919 - 51321075
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  51320919 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 51321017  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||  ||||| |||||    
T  51321018 atttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtg 51321075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 25504847 - 25504696
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| ||  |||||||| |||| | ||||  |||||||||||||||||| |||||||         |||  || |||||||||||| ||||    
T  25504847 ttcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcactt-aaaaaaagtccagtgatattcaaaatcattcaa 25504749  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttc 177  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  25504748 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 48261204 - 48261281
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  48261204 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 48261281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 54853676 - 54853520
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | ||| |||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||| | ||||    
T  54853676 ttcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaattattcaa 54853578  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| | ||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  54853577 atttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 54853520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 23987291 - 23987346
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  23987291 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatg 23987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 28371000 - 28371086
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    |||||||||||||||| |||||||   |||||||||||||||||||  |||||| || ||||||||||||||||||||||| |||||    
T  28371000 atggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 24131095 - 24131026
Alignment:
Q  122 tcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  24131095 tcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 24131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 24131180 - 24131115
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||    
T  24131180 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt 24131115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 39307461 - 39307297
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||||||| ||||| | |||||| |||| |||||||||||||| ||||||||| ||         || | ||||||||| ||||| ||||    
T  39307461 ttcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatca-tttaaaaaaagtcttgtggtattcataatcattcaa 39307363  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||| | || |||| |||||| ||||   |||||||| ||||||||||||||||||||||| |||||    
T  39307362 atttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaatttta 39307297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 27454207 - 27454123
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttt 189  Q
    ||||||||||||||| |||||||  ||| |||| |||||||||| ||||||||||| ||||||||| ||||||||||||| ||||    
T  27454207 tggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaatttt 27454123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 30967507 - 30967376
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | ||||||||||  |||||||||||||| | ||||||||||         || | ||||||||||||||| ||||    
T  30967507 ttcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 30967409  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| | ||||||||||||||||||| |||||||    
T  30967408 atttcaaaggattgtttaataaattggattttg 30967376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 32684195 - 32684065
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||| |||||| |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  32684195 ttcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcattt--aaaaaagtcttgtggtattcaaaatcattcaa 32684098  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| ||||||||||||||||||||| |||||||    
T  32684097 atttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 29649861 - 29649731
Alignment:
Q  40 tttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaattccgaaggattg 139  Q
    |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||||| |||| |||||    
T  29649861 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattg 29649763  T
Q  140 tttaataaattagattttgat-gattttgtgg 170  Q
    ||||||||||| ||||||||| ||||||||||    
T  29649762 tttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 30009882 - 30009721
Alignment:
Q  29 aatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaatt 128  Q
    |||||| ||| ||| |||||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| | |||||    
T  30009882 aatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcatttaaatt 30009784  T
Q  129 ccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
       || ||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||    
T  30009783 ttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaatttta 30009721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 53275837 - 53275990
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||| |||||| |||||||||||| |||||| |||| |||||||||||||| | || |||||||         ||   || |||| ||||||| ||||    
T  53275837 ttcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcactt-aaaaaaagtctagtgatatttaaaatcattcaa 53275935  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttcta 179  Q
    ||| ||||||||||| |||||||| |||||||||| ||||||||| |||||||||    
T  53275936 atttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttcta 53275990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 31314861 - 31314809
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  31314861 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 31314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 49834942 - 49834890
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  49834942 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 40537353 - 40537214
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||||| |||||| |||| |||||||||||| |||||| |||||||            | ||||||||||||||| | ||    
T  40537353 ttcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa------tgtggtattcaaaatcatttaa 40537260  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgg 170  Q
    ||| |||| |||||||||||||||  ||||||||| ||||||||||    
T  40537259 atttcgaatgattgtttaataaatctgattttgatggattttgtgg 40537214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 12913300 - 12913353
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    |||||||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  12913300 atggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttg 12913353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 27768012 - 27768069
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||||||||||  |||||| |||||| |||| |||||||||||||||||||    
T  27768012 ttcaatcaagattttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 27768069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 56445475 - 56445422
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||| |||||||    
T  56445475 atggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 56445422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 5800055 - 5800107
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||| |||||||    
T  5800055 tggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttg 5800107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 28483976 - 28484028
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||    
T  28483976 tggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttg 28484028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 37915783 - 37915839
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactct 82  Q
    ||||||||||| ||||||||| |||| |||||| |||| ||||||||||||||||||    
T  37915783 ttcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactct 37915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 36479360 - 36479305
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||| | ||||||| ||||||||| ||||||||||| ||||||||||    
T  36479360 tggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatg 36479305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 5441360 - 5441417
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  5441360 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 5441417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 11090347 - 11090408
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatc 87  Q
    ||||||||||| | |||| || |||| ||||||||||| |||||||||||||||| ||||||    
T  11090347 ttcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 20021342 - 20021407
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||||| |||||||||| | |||| | |||  |||||||||||||||| ||||||||||    
T  20021342 ttcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatcactt 20021407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 30967549 - 30967492
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  30967549 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 30967492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 51320877 - 51320934
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| ||||||||||| |||||||||||||||||||    
T  51320877 ttcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctt 51320934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 41725205 - 41725276
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtg 182  Q
    |||||||||||| |||||||  |||||||||||   |||||| |||||||||| ||||||||||||||| |||||    
T  41725205 tattcaaaatcattcaaattttgaaggattgtt---taaattggattttgatgaattttgtgggattttatagtg 41725276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 49501636 - 49501588
Alignment:
Q  110 attcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||| ||||||| |||| |||||||||||||||| |||||||    
T  49501636 attcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 49501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 49507701 - 49507653
Alignment:
Q  110 attcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||| ||||||| |||| |||||||||||||||| |||||||    
T  49507701 attcaaaatcattcaaatttcgaatgattgtttaataaattggattttg 49507653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 20021436 - 20021495
Alignment:
Q  132 aaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||| || |||| |||||    
T  20021436 aaggattgtttaataaattagattttgctggattttatgggattttttaatgaaatttta 20021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 8711978 - 8712028
Alignment:
Q  141 ttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||| |||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaatttta 8712028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 24736447 - 24736497
Alignment:
Q  141 ttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    |||||||||| |||||||||| |||||||| |||||||||||||| |||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaatttta 24736497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 37915741 - 37915795
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagact 80  Q
    ||||||||||| ||||||| | |||| |||||| |||| ||||||||||||||||    
T  37915741 ttcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagact 37915795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 54341100 - 54341157
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| || | |||||||||||||||||||    
T  54341100 ttcaatcaagactttttgcaatttaaaaaaagtcttatggtattcaatcaagactctt 54341157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 54853718 - 54853661
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  54853718 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 54853661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 41725074 - 41725138
Alignment:
Q  19 tgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    |||||| ||||||||||||||||||  | |||| |||| | |||| |||||||||||| ||||||    
T  41725074 tgtgatattcaatcaagattttttgcaacttaaaaaaaatattgtggtattcaatcaatactctt 41725138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 50018328 - 50018372
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaatt 150  Q
    |||||||||| |||| |||||||  ||||||||||||||||||||    
T  50018328 tggtattcaagatcattcaaattttgaaggattgtttaataaatt 50018372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 3999853 - 3999689
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  3999853 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaaatctagtggtattcaaaatcattcaa 3999755  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  3999754 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 3999689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 19253825 - 19253989
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  19253825 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 19253923  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  19253924 atttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 19253989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 20498207 - 20498371
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  20498207 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 20498305  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  20498306 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 20498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 33808007 - 33807842
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||| |||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  33808007 ttcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaa 33807908  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  33807907 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 33807842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 33996749 - 33996585
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         |||  ||||||||||||||| ||||    
T  33996749 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaaatccagtggtattcaaaatcattcaa 33996651  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||    
T  33996650 atttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaatttta 33996585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 10139354 - 10139190
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  || |||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  10139354 ttcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 10139256  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  10139255 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 10139190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 51699687 - 51699524
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||| | |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  51699687 ttcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcactt--aaaaaaatctagtggtattcaaaatcattcaa 51699590  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  51699589 atttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaatttta 51699524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 40246842 - 40247005
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| || |||| ||         ||   ||||||||||||||| ||||    
T  40246842 ttcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagtt-aaaaaaagtctagtggtattcaaaatcattcaa 40246940  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt 189  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  40246941 atttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 40247005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 996294 - 996130
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| ||| |||||| | |||||| |||| |||||||||||||| |||| |||||||         ||   ||||||||||||||| ||||    
T  996294 ttcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 996196  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  996195 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 996130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 37820685 - 37820521
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||| | |||| |||||||||||||| |||| |||||||         ||   ||||||||||||||| ||||    
T  37820685 ttcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 37820587  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||||    
T  37820586 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaatttta 37820521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 52618181 - 52618017
Alignment:
Q  18 atgtgatcttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaa 117  Q
    ||||||| ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||    
T  52618181 atgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaa 52618083  T
Q  118 tcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  52618082 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 52618017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 3206334 - 3206249
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  3206334 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 3206249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 29030004 - 29030167
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||| |||| | |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         || | ||||||||||||||| ||||    
T  29030004 ttcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt--aaaaaagtcttgtggtattcaaaatcattcaa 29030101  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||    
T  29030102 attttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaatttta 29030167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 35337733 - 35337897
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  ||||||||| | |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||  | ||||    
T  35337733 ttcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaaaaattcaa 35337831  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  35337832 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 35337897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 40897142 - 40897298
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||| |||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || ||||||||||||||||| ||||    
T  40897142 ttcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttatggtattcaaaatcattcaa 40897240  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  40897241 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtg 40897298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 44906721 - 44906565
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  44906721 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 44906623  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  44906622 atttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtg 44906565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 53929336 - 53929172
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| | ||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcatttaa 53929238  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||  |||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||| |||||    
T  53929237 atatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaatttta 53929172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 54625590 - 54625754
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| |||  ||||||||||| |||| | |||| ||||||||||||||||||| |||||||         ||   ||||||||||||| | ||||    
T  54625590 ttcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaattattcaa 54625688  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  54625689 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 54625754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 1440161 - 1440006
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaa-gttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| |||    
T  1440161 ttcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattca 1440063  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctag 180  Q
    |||| | |||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  1440062 aatttccaaggattgtttaataaatcagattttgatggattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 25418364 - 25418527
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||||| || |||||||         ||    |||||||||||||| ||||    
T  25418364 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcactt-acaaaaaatctagcggtattcaaaatcattcaa 25418462  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt 189  Q
    |||   |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  25418463 atttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 25418527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 6589562 - 6589726
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| |||  ||||||||||| |||||| |||| ||||||||||||||||||| |||| ||         ||   ||||||||||||||| ||||    
T  6589562 ttcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcattt-aaaaaaagtctagtggtattcaaaatcattcaa 6589660  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| ||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  6589661 atttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 6589726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 29449066 - 29448902
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    |||||||||||||  ||||||||||  |||||| ||||  |||||||||||||||||  |||||||         ||   ||||||||||||||| ||||    
T  29449066 ttcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 29448968  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||    
T  29448967 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaatttta 29448902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 44762245 - 44762081
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| ||||||  ||| ||||||||||||||||||| |||||||         ||   ||||||| ||||| | ||||    
T  44762245 ttcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtatttaaaattattcaa 44762147  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
     || |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  44762146 gtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 44762081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 52114526 - 52114691
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||| ||||||| |||||||||||| |||||| |||| |||||||||||||||| || |||||||         ||   ||||||||||||| | ||||    
T  52114526 ttcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaa 52114625  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| || ||||||||||||||||| |||||||||| |||||||||| |||||||||| || |||||    
T  52114626 atttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaatttta 52114691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 182
Target Start/End: Original strand, 26107260 - 26107415
Alignment:
Q  27 tcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaa 126  Q
    |||||||||||| |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| |||||    
T  26107260 tcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaatt-aaaaaaagtcttgtggtattcaaaatcattcaaa 26107358  T
Q  127 ttccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    || ||||||||||||||||||||| ||||||||| ||||||||| |||||| |||||    
T  26107359 tttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtg 26107415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 17946286 - 17946442
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         ||   || |||||||||||| ||||    
T  17946286 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtctcgtgatattcaaaatcattcaa 17946384  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| | ||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  17946385 atttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 17946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 18749689 - 18749766
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  18749689 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 18749766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 22057839 - 22057924
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||| ||||||| ||||||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  22057839 tggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 22057924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 34484238 - 34484082
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         |  | ||||||||||||||| ||||    
T  34484238 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttaaaaaaagttttgtggtattcaaaatcattcaa 34484140  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  34484139 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 34484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 36674338 - 36674182
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  36674338 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 36674240  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  36674239 attttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 36674182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 48379155 - 48379311
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||| ||||| ||||||||||         || | ||||||||||||||| ||||    
T  48379155 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 48379253  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||||||||||||||||||||  |||||||| |||||||||||||||| |||||    
T  48379254 atttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtg 48379311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 54628841 - 54628998
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||           || | ||||||||||||||| ||||    
T  54628841 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaa 54628940  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| | ||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  54628941 atttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 54628998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 5825138 - 5825218
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaa 184  Q
    |||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  5825138 atggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaa 5825218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 51737935 - 51737784
Alignment:
Q  26 ttcaatcaagattttttgtcattt-aagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactca 124  Q
    ||||||||||| | ||| |||||| || |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| |||    
T  51737935 ttcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattca 51737837  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggatttt 176  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  51737836 aatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 51737784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 6035179 - 6035097
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||| ||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  6035179 tattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaatttta 6035097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 31646492 - 31646336
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | ||||| |||| | |||||| ||| ||||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  31646492 ttcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcattt-aaaaaaaatcttgtggtattcaaaatcattcaa 31646394  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||| ||||||||||| |||| ||||||||| |||||||||||||||| |||||    
T  31646393 atttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtg 31646336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 32580253 - 32580330
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  32580253 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtg 32580330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 50903369 - 50903292
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  50903369 tggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 50903292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 23753594 - 23753463
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  23753594 ttcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 23753496  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| ||||||||||||||||||||| |||||||    
T  23753495 atttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 20832993 - 20833139
Alignment:
Q  29 aatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaatt 128  Q
    |||||||| | |||||||||| | |||||| |||  |||||||||||||| | ||||||||||         || | ||||||||||||||| |||||||    
T  20832993 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaaatt 20833091  T
Q  129 ccgaaggattgtttaataaattagattttgat-gattttgtgggattt 175  Q
    | |||||||||||||||||||| ||||||||| ||||||||| |||||    
T  20833092 cggaaggattgtttaataaattggattttgatggattttgtgagattt 20833139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 52810376 - 52810526
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | ||||||||||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  52810376 ttcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 52810474  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggatttt 176  Q
    |||  ||| ||||||||||||||||  |||||||| ||||||||||||||||    
T  52810475 attttgaatgattgtttaataaattgaattttgatggattttgtgggatttt 52810526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 11431603 - 11431680
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||| ||||||| | |||||||||||||||| |||||    
T  11431603 tggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtg 11431680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 1439998 - 1439947
Alignment:
Q  131 gaaggattgtttaataaattagattttgat-gattttgtgggattttctagt 181  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1439998 gaaggattgtttaataaattagattttgatagattttgtgggattttctagt 1439947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 10660612 - 10660667
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  10660612 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 10660667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 10728849 - 10728715
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||| ||||||| ||||    
T  10728849 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-acaaaaagtcttgtggtatttaaaatcattcaa 10728751  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    |||  |||||||||||||||||||| ||||||||||    
T  10728750 atttggaaggattgtttaataaattggattttgatg 10728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 39038038 - 39038172
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | |||||| |||||||| ||||    
T  39038038 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-taaaaaagtcttgtggtatccaaaatcattcaa 39038136  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| ||||| ||||||||||||||| ||||||||||    
T  39038137 atttcgaagaattgtttaataaattggattttgatg 39038172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 27899421 - 27899473
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  27899421 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 27899473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 55235264 - 55235347
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg--attttgtgggattttctagtgaattttta 190  Q
    |||||||||||| ||||||| |||| |||||||||||||||| | ||||||||   ||||||||||||||||| |||| |||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaatttta 55235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 539533 - 539478
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  539533 tggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatg 539478  T

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Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 6131379 - 6131317
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatca 88  Q
    ||||||||||| |  ||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  6131379 ttcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatca 6131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 39842610 - 39842560
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttga 159  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  39842610 tattcaaaatcattcaaatttcgaagaattgtttaataaattagattttga 39842560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 37454859 - 37454982
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||| | |||||| |||   ||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  37454859 ttcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 37454957  T
Q  126 attccgaaggattgtttaataaatt 150  Q
    ||| |||| ||||||||||||||||    
T  37454958 atttcgaatgattgtttaataaatt 37454982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 52080004 - 52080056
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    ||||||||||||||| |||||||  ||||||||||||||||||| ||||||||    
T  52080004 tggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 52080056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 10660491 - 10660548
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  10660491 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 10660548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 36674380 - 36674323
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  36674380 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 36674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 6131421 - 6131366
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactc 81  Q
    ||||||||||||   ||||||||||| |||||||||||  ||||||||||||||||    
T  6131421 ttcaatcaagatccattgtcatttaaaaaaagttttgtgttattcaatcaagactc 6131366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 50762179 - 50762124
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| || |||| |||| |||||||| ||||||| ||||||||||    
T  50762179 tggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatg 50762124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 6131259 - 6131217
Alignment:
Q  190 atgaaaaaataagatttcttaggattgtttttccttttaagat 232  Q
    ||||||| || ||||||||||||||||||||| ||||||||||    
T  6131259 atgaaaacatgagatttcttaggattgttttttcttttaagat 6131217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 10660533 - 10660595
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatca 88  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| |||||||    
T  10660533 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 10660595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 23535940 - 23535890
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattt 156  Q
    ||||||||||||||| |||||||  ||||||| ||||||| ||||||||||    
T  23535940 tggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 6035261 - 6035196
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||| | ||||||||||    
T  6035261 ttcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactt 6035196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 11431482 - 11431539
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| ||||||||| |||||||||    
T  11431482 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaagactctt 11431539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 12103627 - 12103692
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    |||||| |||||| |||||||||| | |||||| |||  |||||||||||||| | ||||||||||    
T  12103627 ttcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactt 12103692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 18749526 - 18749583
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  18749526 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 18749583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 18749568 - 18749633
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcactt 91  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||| ||| ||||||||||    
T  18749568 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt 18749633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 23753636 - 23753579
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||| ||||    
T  23753636 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagattctt 23753579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 27240493 - 27240436
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  27240493 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 27240436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 40897100 - 40897157
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||||||||||  | |||| |||||| |||| ||||||| |||||||||||    
T  40897100 ttcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcattcaagactctt 40897157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 44906763 - 44906706
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  44906763 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 44906706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 50762300 - 50762243
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  50762300 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 50762243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 50903493 - 50903436
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  50903493 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 50903436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 54628799 - 54628856
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  54628799 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 54628856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 6131317 - 6131277
Alignment:
Q  151 agattttgatg-attttgtgggattttctagtgaattttta 190  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  6131317 agattttgatggattttgtgggattttctagtgaaatttta 6131277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 44276465 - 44276514
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttg 158  Q
    |||||||||||||||| |||||||    |||||||||||||||||| |||||||    
T  44276465 atggtattcaaaatcattcaaatt----aggattgtttaataaattggattttg 44276514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 14198787 - 14198623
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||| ||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         |||  ||||||||||||||| ||||    
T  14198787 ttcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtccagtggtattcaaaatcattcaa 14198689  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  14198688 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 14198623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 24776355 - 24776519
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  24776355 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 24776453  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  24776454 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 24776519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 16269691 - 16269855
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  16269691 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 16269789  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  16269790 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaatttta 16269855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 20605236 - 20605400
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| | ||    
T  20605236 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattaaa 20605334  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  20605335 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 20605400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 31170834 - 31170670
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  31170834 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 31170736  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  31170735 atttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 31170670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 12407380 - 12407544
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||| |||||||| |||||||         ||   ||||||||||||||| ||||    
T  12407380 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 12407478  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  12407479 attttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 12407544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 35317062 - 35317226
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| ||||  |||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  35317062 ttcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 35317160  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||    
T  35317161 atttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 35317226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 44765775 - 44765939
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||| |||||||| |||||||         ||   ||||||||||||||| ||||    
T  44765775 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 44765873  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  44765874 atttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 44765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 43847646 - 43847810
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||||||| |||||||         ||   | ||||||||||||| ||||    
T  43847646 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagttgtattcaaaatcattcaa 43847744  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||| |||||    
T  43847745 atttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaatttta 43847810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 1789442 - 1789606
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| || |  ||||||||||| |||||| |||||||         ||   ||||||||||||||| ||||    
T  1789442 ttcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 1789540  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  1789541 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaatttta 1789606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 5093257 - 5093093
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||| ||| |||||||         ||   | ||||||||||||| ||||    
T  5093257 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcactt-aaaaaaagtctagtagtattcaaaatcattcaa 5093159  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  5093158 attttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaatttta 5093093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 10657406 - 10657562
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||  |||||||||| | ||||||||||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  10657406 ttcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 10657504  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| |||| |||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  10657505 atttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtg 10657562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 22551973 - 22551809
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||||| || |||||||         ||   ||||||||||||| | ||||    
T  22551973 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcactt-aaaaaaagtctagtggtattcaaaattattcaa 22551875  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| |||| ||||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||    
T  22551874 atttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaatttta 22551809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 28844555 - 28844711
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  28844555 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 28844653  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  28844654 atttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtg 28844711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 190
Target Start/End: Complemental strand, 305675 - 305511
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||| | |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  305675 ttcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 305577  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||  ||| ||||||||||||||| |||||| ||| ||||||||| |||||||||||||| |||||    
T  305576 attttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaatttta 305511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 25288159 - 25288315
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  ||||||| |||||||| ||||||||||         || | ||||||||||||||| ||||    
T  25288159 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcactt-aaaaaaaatcttgtggtattcaaaatcattcaa 25288257  T
Q  126 attccgaaggattgtttaataaattagattttgatg-attttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  25288258 atttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtg 25288315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 32125332 - 32125417
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||    
T  32125332 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaatttta 32125417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 33135623 - 33135779
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         ||   ||||||||||||||| ||||    
T  33135623 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtctcgtggtattcaaaatcattcaa 33135721  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  33135722 atttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 33135779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 28740493 - 28740349
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  28740493 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 28740395  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgg 170  Q
    ||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  28740394 atttcgaaggattgtttaataaattggattttgatggattttgtgg 28740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 9120208 - 9120290
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    |||||||||||| ||| |||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  9120208 tattcaaaatcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaatttta 9120290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 18177346 - 18177423
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||| ||||||||| |||||||||||||||| |||||    
T  18177346 tggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtg 18177423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 26788865 - 26788942
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  26788865 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 26788942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 7026604 - 7026738
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||| ||         || | ||||||||||||||| ||||    
T  7026604 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-aaaaaaagtcttgtggtattcaaaatcattcaa 7026702  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| ||||||||||||||||||||| ||||||||||    
T  7026703 atttcgaaggattgtttaataaattggattttgatg 7026738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 20605152 - 20605209
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||||    
T  20605152 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 20605209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 379015 - 379079
Alignment:
Q  105 atggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgt 168  Q
    |||||||||||||||| |||||||  |||||||||||||||||||| ||||||||| ||||||||    
T  379015 atggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 3574847 - 3574978
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| |  ||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | || |||||||||||| ||||    
T  3574847 ttcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtgatattcaaaatcattcaa 3574945  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    ||| ||||||||||||||||||||| |||||||    
T  3574946 atttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 13833632 - 13833501
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| ||||| |||||| | |||||| |||   ||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  13833632 ttcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcactt-aaaaaaagtcttctggtattcaaaatcattcaa 13833534  T
Q  126 attccgaaggattgtttaataaattagattttg 158  Q
    |||  |||||||||||||||||||| |||||||    
T  13833533 attttgaaggattgtttaataaattggattttg 13833501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 6224755 - 6224626
Alignment:
Q  29 aatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaatt 128  Q
    |||||||| | |||||||||| | |||||| |||  |||||||||||||| | ||||||||||         || | ||||||||||||| | |||||||    
T  6224755 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatt 6224656  T
Q  129 ccgaaggattgtttaataaattagattttg 158  Q
     ||||||||| ||||||||||| |||||||    
T  6224655 tcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 26601407 - 26601279
Alignment:
Q  29 aatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaaatt 128  Q
    |||||||| | ||||||||| || |||||| |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| |||||||    
T  26601407 aatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcactt-aaaaaaagtcacgtggtattcaaaatcattcaaatt 26601309  T
Q  129 ccgaaggattgtttaataaattagattttg 158  Q
     |||| | ||||||||||||| ||||||||    
T  26601308 tcgaatgtttgtttaataaatcagattttg 26601279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 43078653 - 43078719
Alignment:
Q  117 atcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||| ||||||| |||| |||||||||||||||| |||||| || |||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtg 43078719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 7026562 - 7026619
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  7026562 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 7026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 10125544 - 10125487
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| | ||||  |||||| ||||||||||| |||||||||||||||||||    
T  10125544 ttcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagactctt 10125487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 26788742 - 26788799
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  26788742 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 26788799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 32125250 - 32125307
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||| ||| |||||||||||| ||||||  ||| |||||||||||||||||||    
T  32125250 ttcaatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactctt 32125307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 33135581 - 33135638
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  33135581 ttcaatcaagactttttgcaatttaaaaaaagtattgtggtattcaatcaagactctt 33135638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 3463751 - 3463806
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||| ||||||| |||| || | ||||||||||||||||||| ||||||||||    
T  3463751 tggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatg 3463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 3574805 - 3574859
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagact 80  Q
    ||||||||||| ||||||  | |||| ||||||||||| ||||||||||||||||    
T  3574805 ttcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagact 3574859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 18177267 - 18177329
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatca 88  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| |||||||    
T  18177267 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 18177329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 24776537 - 24776579
Alignment:
Q  190 atgaaaaaataagatttcttaggattgtttttccttttaagat 232  Q
    ||||||| || ||||||||||||||||||||| ||||||||||    
T  24776537 atgaaaacatgagatttcttaggattgttttttcttttaagat 24776579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 26788784 - 26788846
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatca 88  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| |||||||    
T  26788784 ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 26788846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 215477 - 215420
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  215477 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 215420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 10125418 - 10125377
Alignment:
Q  109 tattcaaaatcactcaaattccgaaggattgtttaataaatt 150  Q
    |||||||||||| ||||||| | |||||||||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaatt 10125377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 28844513 - 28844570
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  28844513 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 28844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 102092 - 102258
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaag--ttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactc 123  Q
    ||||||||||||| |||||||||||| |||||  | |||| ||||||||||||||||||| |||||||         ||   ||||||||||||||| ||    
T  102092 ttcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattc 102190  T
Q  124 aaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  102191 aaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 102258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 100210 - 100374
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| |||||||||||| |||||| |||| ||| ||||||||||||||| |||||||         ||   ||||||||||||||| ||||    
T  100210 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcactt-aaaaaaagtctagtggtattcaaaatcattcaa 100308  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||| | |||||||||||||||||| | |||||||| ||||||||||| |||||||||||| |||||    
T  100309 atttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaatttta 100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 39103 - 38940
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||||| ||| |||||||| |||||| |||| ||||||||| ||||||||| |||||||         ||   || |||||||||||| ||||    
T  39103 ttcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcactt-aaaagaagtctagtgatattcaaaatcattcaa 39005  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt 189  Q
    |||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  39004 atttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttt 38940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 747 - 584
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntccta-tggtattcaaaatcactca 124  Q
    ||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||||| |||||||         |  || ||||||||||||||| |||    
T  747 ttcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttt--tagtggtattcaaaatcattca 650  T
Q  125 aattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttt 189  Q
    ||||  ||||||||||||||||||| | |||||||| |||||||||| ||||||||||||| ||||    
T  649 aatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaatttt 584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 38733 - 38649
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtgaattttta 190  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||    
T  38733 tggtattcaaaatcattcaaatttcgaaggattgtttaat-aatcagattttgatggattttgtgggattttctagtgaaatttta 38649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 58205 - 58129
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagt 181  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  58205 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagt 58129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 862 - 1018
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||| |  ||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  862 ttcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaa 961  T
Q  126 attccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||| ||||| ||| ||||||||| ||||||||||| |||||||||||||||| |||||    
T  962 atttcgaagaattatttaataaa-tagattttgatggattttgtgggattttgtagtg 1018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 820 - 877
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  820 ttcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctt 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 39746 - 39669
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||| | ||||||||| ||||||||||| ||||||||| |||||||||||||||| |||||    
T  39746 tggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtg 39669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 39867 - 39810
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| |||||   | |||| ||||||||||| |||||||||||||||||||    
T  39867 ttcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatcaagactctt 39810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 37035 - 36959
Alignment:
Q  107 ggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||||||||||||| | ||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtg 36959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 13881 - 14015
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  13881 ttcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 13979  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| | || |||||||||||||||| ||||||||||    
T  13980 atttcaaaagattgtttaataaattggattttgatg 14015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 21446 - 21312
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactcttcatcacttcnnnnnnnntcctatggtattcaaaatcactcaa 125  Q
    ||||||||||| | |||||||||| | |||||| |||  |||||||||||||||| ||||||||||         || | ||||||||||||||| ||||    
T  21446 ttcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcactt-aaaaaaagtcttgtggtattcaaaatcattcaa 21348  T
Q  126 attccgaaggattgtttaataaattagattttgatg 161  Q
    ||| | || |||||||||||||||| ||||||||||    
T  21347 atttcaaaagattgtttaataaattggattttgatg 21312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 10638 - 10715
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||  |||||||| |||||| ||||||||| |||||    
T  10638 tggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtg 10715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 10517 - 10574
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  |||||| |||||| |||| |||||||||||||||||||    
T  10517 ttcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctt 10574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 4278 - 4333
Alignment:
Q  106 tggtattcaaaatcactcaaattccgaaggattgtttaataaattagattttgatg 161  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| ||||||||||    
T  4278 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatg 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 4157 - 4214
Alignment:
Q  26 ttcaatcaagattttttgtcatttaagaaaagttttgtcgtattcaatcaagactctt 83  Q
    ||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||||    
T  4157 ttcaatcaagactttttgcaaattaaaaaaagtcttgtggtattcaatcaagactctt 4214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 3797 - 3744
Alignment:
Q  130 cgaaggattgtttaataaattagattttgat-gattttgtgggattttctagtg 182  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  3797 cgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtg 3744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 199905 - 199982
Alignment:
Q  108 gtattcaaaatcactcaaattccgaaggattgtttaataaattagattttga-tgattttgtgggattttctagtgaa 184  Q
    ||||| ||||||| |||||||  ||| || |||||||||||||  ||||||| |||||||||| |||||| |||||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaa 199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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