View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0456_high_18 (Length: 225)

Name: NF0456_high_18
Description: NF0456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0456_high_18
NF0456_high_18
[»] scaffold0303 (2 HSPs)
scaffold0303 (1-131)||(20-150)
scaffold0303 (1-131)||(4439-4569)
[»] chr6 (22 HSPs)
chr6 (1-131)||(35015149-35015279)
chr6 (1-131)||(18002488-18002618)
chr6 (1-131)||(18583450-18583580)
chr6 (1-131)||(26089868-26089998)
chr6 (9-131)||(19983284-19983406)
chr6 (1-131)||(23995056-23995186)
chr6 (1-131)||(15742211-15742342)
chr6 (1-130)||(22585539-22585668)
chr6 (1-130)||(22590370-22590499)
chr6 (1-130)||(15889699-15889828)
chr6 (14-131)||(4991219-4991335)
chr6 (1-130)||(15004900-15005028)
chr6 (2-130)||(25640549-25640676)
chr6 (10-130)||(32276756-32276876)
chr6 (14-115)||(19629477-19629578)
chr6 (24-118)||(17374924-17375018)
chr6 (14-131)||(18823379-18823496)
chr6 (14-93)||(16300010-16300089)
chr6 (14-131)||(18839234-18839351)
chr6 (28-93)||(21931364-21931429)
chr6 (28-93)||(19175311-19175376)
chr6 (28-92)||(16136423-16136487)
[»] chr5 (11 HSPs)
chr5 (1-131)||(2031943-2032073)
chr5 (1-131)||(11342818-11342948)
chr5 (1-131)||(21650828-21650958)
chr5 (1-131)||(21205059-21205189)
chr5 (8-130)||(22662668-22662790)
chr5 (14-131)||(16105790-16105906)
chr5 (8-130)||(25004956-25005078)
chr5 (10-131)||(7529043-7529164)
chr5 (14-115)||(17909652-17909753)
chr5 (14-131)||(9730374-9730491)
chr5 (16-93)||(108862-108939)
[»] chr4 (16 HSPs)
chr4 (1-131)||(14951895-14952025)
chr4 (1-131)||(5682519-5682649)
chr4 (1-131)||(15272304-15272434)
chr4 (1-131)||(25119199-25119329)
chr4 (1-119)||(19559492-19559610)
chr4 (23-130)||(49071842-49071949)
chr4 (10-130)||(34177633-34177753)
chr4 (10-131)||(14500208-14500329)
chr4 (10-131)||(32460699-32460820)
chr4 (32-102)||(21417471-21417541)
chr4 (14-131)||(16522965-16523082)
chr4 (38-118)||(12133606-12133686)
chr4 (14-131)||(8045091-8045208)
chr4 (14-93)||(9295841-9295920)
chr4 (14-93)||(14996274-14996353)
chr4 (10-115)||(9795359-9795464)
[»] chr3 (31 HSPs)
chr3 (1-131)||(30153075-30153205)
chr3 (1-131)||(54685293-54685423)
chr3 (1-131)||(38168047-38168177)
chr3 (1-131)||(45581764-45581894)
chr3 (1-131)||(53771174-53771304)
chr3 (4-131)||(55513006-55513133)
chr3 (1-131)||(7854115-7854245)
chr3 (1-131)||(16261586-16261716)
chr3 (1-131)||(17955976-17956106)
chr3 (1-131)||(23492506-23492636)
chr3 (1-131)||(2844324-2844454)
chr3 (1-131)||(33342014-33342144)
chr3 (1-131)||(3992683-3992813)
chr3 (1-131)||(54038116-54038246)
chr3 (3-131)||(28558306-28558434)
chr3 (1-131)||(18970054-18970184)
chr3 (8-130)||(48421717-48421839)
chr3 (2-130)||(15550732-15550860)
chr3 (28-116)||(14177017-14177105)
chr3 (10-131)||(19946841-19946962)
chr3 (28-118)||(12539066-12539156)
chr3 (10-131)||(14285104-14285225)
chr3 (24-118)||(17393590-17393684)
chr3 (14-115)||(9303107-9303208)
chr3 (30-118)||(11402752-11402840)
chr3 (47-118)||(37915290-37915361)
chr3 (14-115)||(8275852-8275953)
chr3 (14-86)||(16934010-16934082)
chr3 (18-115)||(8268752-8268849)
chr3 (13-118)||(38375693-38375798)
chr3 (13-118)||(10913031-10913136)
[»] chr1 (7 HSPs)
chr1 (1-131)||(15861418-15861548)
chr1 (1-131)||(22367151-22367281)
chr1 (1-131)||(44034963-44035093)
chr1 (1-131)||(21860144-21860274)
chr1 (17-93)||(20254463-20254539)
chr1 (14-86)||(21650076-21650148)
chr1 (17-118)||(40436266-40436367)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-131)||(6535-6665)
[»] chr8 (22 HSPs)
chr8 (1-131)||(24385744-24385874)
chr8 (1-131)||(41506801-41506931)
chr8 (1-131)||(39115408-39115538)
chr8 (1-131)||(274576-274706)
chr8 (1-131)||(641143-641273)
chr8 (1-131)||(826949-827079)
chr8 (1-131)||(22321438-22321568)
chr8 (1-131)||(24716854-24716984)
chr8 (2-130)||(21259484-21259612)
chr8 (1-131)||(17502294-17502424)
chr8 (1-130)||(4233988-4234117)
chr8 (1-88)||(16038916-16039003)
chr8 (1-130)||(23218010-23218139)
chr8 (10-131)||(21494452-21494573)
chr8 (28-123)||(18118281-18118376)
chr8 (14-131)||(22886473-22886590)
chr8 (14-115)||(22147585-22147686)
chr8 (16-115)||(18612555-18612654)
chr8 (16-118)||(18619460-18619562)
chr8 (2-93)||(16002132-16002223)
chr8 (10-88)||(2545089-2545167)
chr8 (17-131)||(3431272-3431386)
[»] chr7 (18 HSPs)
chr7 (1-131)||(126548-126678)
chr7 (1-131)||(111261-111391)
chr7 (1-131)||(2029054-2029184)
chr7 (1-131)||(32494038-32494168)
chr7 (1-131)||(42056281-42056411)
chr7 (1-127)||(2190182-2190308)
chr7 (1-131)||(3049716-3049845)
chr7 (1-131)||(1937009-1937134)
chr7 (1-119)||(39291513-39291631)
chr7 (11-130)||(13352095-13352214)
chr7 (84-131)||(15516854-15516901)
chr7 (24-119)||(15977845-15977940)
chr7 (44-118)||(17984753-17984827)
chr7 (28-118)||(18151309-18151399)
chr7 (14-131)||(371236-371353)
chr7 (28-93)||(8563369-8563434)
chr7 (44-90)||(15575874-15575920)
chr7 (13-118)||(45149729-45149834)
[»] chr2 (13 HSPs)
chr2 (1-131)||(9652888-9653018)
chr2 (1-131)||(21274041-21274171)
chr2 (1-131)||(22274855-22274985)
chr2 (1-131)||(22284088-22284218)
chr2 (14-131)||(25213195-25213311)
chr2 (2-130)||(7321651-7321779)
chr2 (28-123)||(20279571-20279666)
chr2 (10-131)||(15633356-15633477)
chr2 (10-131)||(28031230-28031351)
chr2 (14-131)||(33128191-33128308)
chr2 (14-131)||(24826710-24826827)
chr2 (14-131)||(17204478-17204595)
chr2 (16-93)||(25595168-25595245)
[»] scaffold0251 (2 HSPs)
scaffold0251 (1-131)||(13378-13508)
scaffold0251 (1-51)||(21432-21482)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-131)||(31272-31402)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-131)||(30227-30357)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-131)||(41442-41572)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-131)||(55714-55844)
[»] scaffold0686 (2 HSPs)
scaffold0686 (1-131)||(6075-6205)
scaffold0686 (77-131)||(5869-5923)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-131)||(970-1100)
[»] scaffold0465 (1 HSPs)
scaffold0465 (13-131)||(9975-10093)
[»] scaffold0234 (1 HSPs)
scaffold0234 (1-131)||(17396-17526)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-131)||(79997-80127)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-131)||(15082-15212)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-131)||(162170-162300)
scaffold0016 (1-131)||(166256-166386)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-131)||(12510-12642)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-131)||(443-573)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-96)||(193515-193610)
scaffold0004 (1-89)||(186560-186648)
[»] scaffold0507 (1 HSPs)
scaffold0507 (8-130)||(1494-1616)
[»] scaffold1295 (1 HSPs)
scaffold1295 (1-130)||(239-368)
[»] scaffold0063 (1 HSPs)
scaffold0063 (7-130)||(44107-44230)
[»] scaffold0028 (1 HSPs)
scaffold0028 (14-131)||(130703-130819)
[»] scaffold0057 (1 HSPs)
scaffold0057 (2-118)||(6017-6133)
[»] scaffold0574 (1 HSPs)
scaffold0574 (1-115)||(9515-9629)
[»] scaffold0037 (1 HSPs)
scaffold0037 (9-115)||(95120-95226)
[»] scaffold0207 (1 HSPs)
scaffold0207 (10-131)||(17841-17962)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-119)||(3841-3963)
[»] scaffold0173 (1 HSPs)
scaffold0173 (14-131)||(5368-5485)
[»] scaffold0335 (1 HSPs)
scaffold0335 (9-123)||(5580-5694)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-131)||(61218-61335)
[»] scaffold0118 (1 HSPs)
scaffold0118 (10-129)||(34406-34525)
[»] scaffold0132 (1 HSPs)
scaffold0132 (82-131)||(42568-42617)
[»] scaffold0001 (1 HSPs)
scaffold0001 (14-115)||(164973-165074)
[»] scaffold0162 (1 HSPs)
scaffold0162 (10-93)||(11887-11970)
[»] scaffold0029 (1 HSPs)
scaffold0029 (10-93)||(49877-49960)
[»] scaffold0615 (1 HSPs)
scaffold0615 (14-131)||(6207-6324)
[»] scaffold0367 (1 HSPs)
scaffold0367 (14-131)||(17305-17422)
[»] scaffold0601 (1 HSPs)
scaffold0601 (14-118)||(877-981)
[»] scaffold0090 (1 HSPs)
scaffold0090 (38-118)||(34455-34535)
[»] scaffold0047 (1 HSPs)
scaffold0047 (38-118)||(19932-20012)
[»] scaffold0009 (1 HSPs)
scaffold0009 (29-118)||(244830-244920)
[»] scaffold0468 (1 HSPs)
scaffold0468 (41-90)||(10992-11041)
[»] scaffold0013 (1 HSPs)
scaffold0013 (28-81)||(7112-7165)
[»] scaffold0317 (1 HSPs)
scaffold0317 (30-118)||(12600-12688)
[»] scaffold0084 (1 HSPs)
scaffold0084 (38-118)||(2853-2933)


Alignment Details
Target: scaffold0303 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 150 - 20
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  150 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 51  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  50 cataagcacgaatttcaaagattgggttcat 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 4569 - 4439
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4569 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatttaaacatatctctacaa 4470  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||| |||||||||||||||||||||    
T  4469 cataagcactaatttcaaagattgggttcat 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 4e-68; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 35015279 - 35015149
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015279 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 35015180  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  35015179 cataagcacgaatttcaaagattgggttcat 35015149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18002618 - 18002488
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18002618 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatgaacatattcaaacatatctctacaa 18002519  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  18002518 cataagcacgaatttcaaagattgggttcat 18002488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18583450 - 18583580
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18583450 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatctctacaa 18583549  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  18583550 cataagcacgaatttcaaagattgggttcat 18583580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26089868 - 26089998
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26089868 taatttacaaactacccattttcatacattatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 26089967  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  26089968 cataagcacgaatttcaaagattgggttcat 26089998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 19983406 - 19983284
Alignment:
Q  9 aaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983406 aaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagca 19983307  T
Q  109 cgaatttcaaagattgggttcat 131  Q
    ||||||||||||||||| |||||    
T  19983306 cgaatttcaaagattggattcat 19983284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 23995056 - 23995186
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  23995056 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaa 23995155  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||| |||| |||||||||||    
T  23995156 cataagcacgaattccaaatattgggttcat 23995186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15742342 - 15742211
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaa-catcaaattaacatattcaaacatatctctaca 99  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  15742342 taatatacaaattacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaatcatcaaattaacataatcaaacatatctctaca 15742243  T
Q  100 acataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||||||||||||||||||||||||    
T  15742242 acataagcacgaatttcaaagattgggttcat 15742211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 22585668 - 22585539
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||| ||||||    
T  22585668 taattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaatactcaaacatatcactacaa 22585569  T
Q  101 cataagcacgaatttcaaagattgggttca 130  Q
    ||| ||||||||||||||||||||||||||    
T  22585568 catgagcacgaatttcaaagattgggttca 22585539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 22590499 - 22590370
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||| ||||||    
T  22590499 taattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaatactcaaacatatcactacaa 22590400  T
Q  101 cataagcacgaatttcaaagattgggttca 130  Q
    ||| ||||||||||||||||||||||||||    
T  22590399 catgagcacgaatttcaaagattgggttca 22590370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 15889828 - 15889699
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||| ||||||    
T  15889828 taattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaaatcaattatcatcaaattaacatactcaaacatatcactacaa 15889729  T
Q  101 cataagcacgaatttcaaagattgggttca 130  Q
    ||| |||||||||||||||| |||||||||    
T  15889728 catgagcacgaatttcaaaggttgggttca 15889699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 4991219 - 4991335
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  4991219 acccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaaat-aacatatccaaacatatctctacaacataagcacgaat 4991317  T
Q  114 ttcaaagattgggttcat 131  Q
    ||||||||||||||||||    
T  4991318 ttcaaagattgggttcat 4991335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 15005028 - 15004900
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| |||||||||||||||  ||||||||| ||| ||||||||| |||||||||||||| | ||||||||||| ||||| ||||||||||| ||||||    
T  15005028 taattcacaaactacccatttatatacatcataaacatgcaatttcctcatcaacaattcaatcaacatcaaatt-acatactcaaacatatcactacaa 15004930  T
Q  101 cataagcacgaatttcaaagattgggttca 130  Q
    ||| ||||||||||||||||||||||||||    
T  15004929 catgagcacgaatttcaaagattgggttca 15004900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 25640676 - 25640549
Alignment:
Q  2 aatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaac 101  Q
    |||| |||||||||||||||   |||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  25640676 aattcacaaactacccatttatctacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatc-ctacaac 25640578  T
Q  102 ataagcacgaatttcaaagattgggttca 130  Q
    || |||||||||||||||  |||||||||    
T  25640577 atgagcacgaatttcaaaagttgggttca 25640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 32276876 - 32276756
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||    
T  32276876 aactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcac 32276777  T
Q  110 gaatttcaaagattgggttca 130  Q
    ||| |||||||||||||||||    
T  32276776 gaaattcaaagattgggttca 32276756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 19629477 - 19629578
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | ||||||  |||||||||    
T  19629477 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccacaacaagagcacgaat 19629576  T
Q  114 tt 115  Q
    ||    
T  19629577 tt 19629578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 17375018 - 17374924
Alignment:
Q  24 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    ||||| ||||||| || |||||||||||||| |||||| ||| || ||||||| |||| ||||||||||| |||||||   ||||||||||||||    
T  17375018 atacaccatgaacatgtaatttcatcatcaataattcaattatcaacaaattagcatactcaaacatatcactacaactagagcacgaatttcaa 17374924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 18823496 - 18823379
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||||||     
T  18823496 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaa 18823397  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  18823396 attagagattgggttcat 18823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 16300089 - 16300010
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| ||||    
T  16300089 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatc 16300010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 18839351 - 18839234
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  | |||||||| |||||| |||| | | ||||  ||||||||     
T  18839351 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcagttaacatactcaaacttatcaccaaaacaagagcacgaaa 18839252  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  18839251 attagagattgggttcat 18839234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 21931364 - 21931429
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    ||||||||| ||||||||||||| |||||||||| ||| |||||| || | |||||||||||||||    
T  21931364 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaatttcatatattcaaacatatc 21931429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 19175311 - 19175376
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    ||||||||| |||||||| |||| |||||||||| ||| |||||| || | ||| |||||||||||    
T  19175311 atcatgaacatgcaattttatcaacaacaattcaattatcatcaattttatatactcaaacatatc 19175376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 16136423 - 16136487
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatat 92  Q
    ||||||||| |||||||||||||  ||| ||||| ||| |||||| || | ||||||||||||||    
T  16136423 atcatgaacatgcaatttcatcaaaaactattcaattatcatcaatttcatatattcaaacatat 16136487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 4e-68; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2031943 - 2032073
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2031943 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 2032042  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  2032043 cataagcacgaatttcaaagattgggttcat 2032073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11342818 - 11342948
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342818 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 11342917  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  11342918 cataagcacgaatttcaaagattgggttcat 11342948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21650828 - 21650958
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21650828 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 21650927  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  21650928 cataagcacgaatttcaaagattgggttcat 21650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21205059 - 21205189
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21205059 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatccaaacatatctctacaa 21205158  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  21205159 cataagcacgaatttcaaagattgggttcat 21205189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 22662790 - 22662668
Alignment:
Q  8 caaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagc 107  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| |||    
T  22662790 caaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatattcaaatatatcactacaacatgagc 22662691  T
Q  108 acgaatttcaaagattgggttca 130  Q
    |||||||||||||||||||||||    
T  22662690 acgaatttcaaagattgggttca 22662668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 16105790 - 16105906
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  16105790 acccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacatatccaaacatatctctacaacataagcacgaat 16105888  T
Q  114 ttcaaagattgggttcat 131  Q
    ||||||||||||||||||    
T  16105889 ttcaaagattgggttcat 16105906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 25004956 - 25005078
Alignment:
Q  8 caaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagc 107  Q
    |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| ||| | | ||||||||| | ||||||||||| || |||||| |||    
T  25004956 caaactacccatttacatacatcatgaacatgcaatttcataattaacaattcaattatccttaaattaacacactcaaacatatcacttcaacatgagc 25005055  T
Q  108 acgaatttcaaagattgggttca 130  Q
    |||||||||||||||||||||||    
T  25005056 acgaatttcaaagattgggttca 25005078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 7529043 - 7529164
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||    
T  7529043 aactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcac 7529142  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||| | ||||||||||    
T  7529143 gaaattcaagggttgggttcat 7529164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 17909652 - 17909753
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||||||    
T  17909652 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaat 17909751  T
Q  114 tt 115  Q
    ||    
T  17909752 tt 17909753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 9730491 - 9730374
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||| | |||| | | ||||  ||||||||     
T  9730491 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaatcttatcaccaaaacaagagcacgaaa 9730392  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  9730391 attagagattgggttcat 9730374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 108939 - 108862
Alignment:
Q  16 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    |||||||||||||| |||||| ||  | ||||||| |||||||||||||| |||  |||||||||| |||||| ||||    
T  108939 ccattttcatacattatgaacatgttaattcatcaccaacaattcatttatcattcaattaacatactcaaacttatc 108862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 14951895 - 14952025
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14951895 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 14951994  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  14951995 cataagcacgaatttcaaagattgggttcat 14952025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5682649 - 5682519
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5682649 taatttacaaactacccaatttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacca 5682550  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  5682549 cataagcacgaatttcaaagattgggttcat 5682519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15272434 - 15272304
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  15272434 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcgtttaacatcaaattaacatatccaaacatatctctacaa 15272335  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  15272334 cataagcacgaatttcaaagattgggttcat 15272304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25119329 - 25119199
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25119329 taatttacaaactatccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacca 25119230  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||  ||||||||||||||    
T  25119229 cataagcacgaattttcaagattgggttcat 25119199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 19559492 - 19559610
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  19559492 taattcacaaactacccatttacatacatcatgaacatgcaatttcatcatcaacaattcaattaacatcaaattaacatgctcaaacatatcactacaa 19559591  T
Q  101 cataagcacgaatttcaaa 119  Q
    ||| |||| ||||||||||    
T  19559592 catgagcaggaatttcaaa 19559610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 49071842 - 49071949
Alignment:
Q  23 catacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagat 122  Q
    |||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||| || |||||||||||||| | |    
T  49071842 catatatcatgaacatgcaatttcatcatcaataattcaattaacatcaaattaacatactcaaacatatcactacaatatgagcacgaatttcaacggt 49071941  T
Q  123 tgggttca 130  Q
    ||||||||    
T  49071942 tgggttca 49071949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 34177753 - 34177633
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    ||||||||||||  ||||||||||||| |||||||| ||||||||||||||| ||| |||  |||||||||| ||||||||||| ||||||||| |||||    
T  34177753 aactacccatttatatacatcatgaacatgcaattttatcatcaacaattcaattatcatgtaattaacatactcaaacatatcactacaacatgagcac 34177654  T
Q  110 gaatttcaaagattgggttca 130  Q
    ||||||  |||||||| ||||    
T  34177653 gaattttcaagattggattca 34177633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 14500329 - 14500208
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||||||||||||||||| |||||| ||  ||||||||| ||| |||||||||| ||| ||||||||||| |||||| |||| | | ||||  |||||    
T  14500329 aactacccattttcatacattatgaacatgttatttcatcaccaataattcatttatcattaaattaacatactcaaacttatcaccaaaacaagagcac 14500230  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||||||||||||||||    
T  14500229 gaaattcaaagattgggttcat 14500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 32460820 - 32460699
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||||| ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||  |||  | | ||||  |||||    
T  32460820 aactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaattataaccaaaacaagagcac 32460721  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||||||||||||||||    
T  32460720 gaaattcaaagattgggttcat 32460699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 21417471 - 21417541
Alignment:
Q  32 tgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaaca 102  Q
    ||||| || ||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||| ||||    
T  21417471 tgaacatgaaatttcatcatcaacaattcaattatcaacaaattcacatattcaaacatatctctaaaaca 21417541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 16522965 - 16523082
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||||||     
T  16522965 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaa 16523064  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  16523065 attagagattgggttcat 16523082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 12133686 - 12133606
Alignment:
Q  38 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||  |||||||||| |||||||   ||||| ||||||||    
T  12133686 tgcaatttcatcattaacaattcaattaacaacaaattaacatacccaaacatatcactacaactagagcaccaatttcaa 12133606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 8045091 - 8045208
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    ||||||| |||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||||||     
T  8045091 acccattctcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaa 8045190  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  8045191 attagagattgggttcat 8045208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 9295841 - 9295920
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    |||||||||||||||| |||||| ||  ||||||| | |||||||||||||| |||  |||||||||| |||||| ||||    
T  9295841 acccattttcatacattatgaacatgttatttcattaccaacaattcatttatcattcaattaacatactcaaacttatc 9295920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 14996274 - 14996353
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    |||||||||||||||| |||||| ||  ||||||||| ||||||||| |||| |||  |||||||||| |||||| ||||    
T  14996274 acccattttcatacattatgaacatgttatttcatcaccaacaattcttttatcattcaattaacatactcaaacttatc 14996353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 9795359 - 9795464
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||| |||||| | |||| |||||| ||  ||||||||| ||| |||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||    
T  9795359 aactactcattttgacacattatgaacatgttatttcatcaccaagaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcac 9795458  T
Q  110 gaattt 115  Q
    ||||||    
T  9795459 gaattt 9795464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30153075 - 30153205
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30153075 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 30153174  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  30153175 cataagcacgaatttcaaagattgggttcat 30153205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 54685423 - 54685293
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54685423 taatttaccaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 54685324  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  54685323 cataagcacgaatttcaaagattgggttcat 54685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38168047 - 38168177
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38168047 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatttctacaa 38168146  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||| ||||||||||||||||||||||||    
T  38168147 cataagtacgaatttcaaagattgggttcat 38168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 45581764 - 45581894
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  45581764 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcattaatcatcaaattaacatattcaaacatatctctacaa 45581863  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  45581864 cataagcacgaatttcaaagattgggttcat 45581894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 53771174 - 53771304
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  53771174 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaa 53771273  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  53771274 cataagcacgaatttcaaagattgggttcat 53771304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 55513006 - 55513133
Alignment:
Q  4 tttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacat 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55513006 tttacaaactacccattttcatacatcattaacttgcaatttcatcatcaacaattcatttaacatcgaattaacatattcaaacatatctctacaacat 55513105  T
Q  104 aagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||||||||||||||||||||    
T  55513106 aagcacgaatttcaaagattgggttcat 55513133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7854115 - 7854245
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7854115 taatttaccaattatccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 7854214  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  7854215 cataagcacgaatttcaaagattgggttcat 7854245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16261586 - 16261716
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  16261586 taatttacaaactacccattttcgtacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaa 16261685  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  16261686 cataagcacgaatttcaaagattgggttcat 16261716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17956106 - 17955976
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  17956106 taatttacaaactactcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcagacatatctctacca 17956007  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  17956006 cataagcacgaatttcaaagattgggttcat 17955976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 23492506 - 23492636
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23492506 taatttacaaactacccattttcatacatcatgaacttgcaatttcataatcaacaattcatttaacatcaaattaacacattcaaacatatctctacaa 23492605  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||| ||||||||||||||||||||||    
T  23492606 cataagcaagaatttcaaagattgggttcat 23492636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2844324 - 2844454
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||    
T  2844324 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaaaatctacaa 2844423  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  2844424 cataagcacgaatttcaaagattgggttcat 2844454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 33342014 - 33342144
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  33342014 taatttaccaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatctctacca 33342113  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||| |||||||||||||||||||||||||||    
T  33342114 cattagcacgaatttcaaagattgggttcat 33342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3992683 - 3992813
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3992683 taatttacaaactacccattttcctacatcatgaacctgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 3992782  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||| ||||||||| ||| ||||||    
T  3992783 cataagcacggatttcaaaggttgagttcat 3992813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 54038246 - 54038116
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54038246 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaa 54038147  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
     |||||||||||| ||||| |||| ||||||    
T  54038146 tataagcacgaatgtcaaacattgagttcat 54038116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 28558306 - 28558434
Alignment:
Q  3 atttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaaca 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||    
T  28558306 atttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttatcatcaaattaacatattcaaacatatctctatcaca 28558405  T
Q  103 taagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||||||||||||| |||||||    
T  28558406 taagcacgaatttcaaagattaggttcat 28558434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18970054 - 18970184
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||    
T  18970054 taattcacaaactacccatttacatacatcatgaacatgaaatttcatcatcaacaattcaattaacatcaaattaacatacttaaacatatcactacaa 18970153  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||| |||||||||||||||||||||||||||    
T  18970154 catgagcacgaatttcaaagattgggttcat 18970184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 48421717 - 48421839
Alignment:
Q  8 caaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagc 107  Q
    ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||| ||||||||| |||    
T  48421717 caaactacccatttatatacatcatgaacatgcaatttcatcaccaacaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagc 48421816  T
Q  108 acgaatttcaaagattgggttca 130  Q
    | |||||||||||||||||||||    
T  48421817 atgaatttcaaagattgggttca 48421839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 15550732 - 15550860
Alignment:
Q  2 aatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaac 101  Q
    |||| |||||||||||||||  ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  15550732 aattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatcactacaac 15550831  T
Q  102 ataagcacgaatttcaaagattgggttca 130  Q
    || |||||||||||||||  |||||||||    
T  15550832 atgagcacgaatttcaaaagttgggttca 15550860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 14177105 - 14177017
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttc 116  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||||| |||||| | ||||||||| ||||||||| || |||||||||    
T  14177105 atcatgaacatgcaatttcatcatcaacaattcaattatcatcaaatgaacatactgaaacatatcactacaacatgaggacgaatttc 14177017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 19946841 - 19946962
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||| ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||  |||| | | ||||  |||||    
T  19946841 aactactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaatttatcaccaaaacaagagcac 19946940  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||||||||||||||||    
T  19946941 gaaattcaaagattgggttcat 19946962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 12539156 - 12539066
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    ||||||||| |||||||||||||||||||||||| ||| || |||||| ||||| |||| |||||| ||| ||||  ||||||||||||||    
T  12539156 atcatgaacatgcaatttcatcatcaacaattcaattatcaacaaattcacatactcaaccatatcactaaaacaagagcacgaatttcaa 12539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 14285104 - 14285225
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||    
T  14285104 aactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcac 14285203  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||| | ||||||||||    
T  14285204 gaaattcaagggttgggttcat 14285225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 17393590 - 17393684
Alignment:
Q  24 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    ||||| ||||||| |||||||||||| |||| |||||| ||| || ||||||||||||  |||||||||| |||||||   ||||||||||||||    
T  17393590 atacagcatgaacatgcaatttcatcgtcaataattcaattatcaacaaattaacatacccaaacatatcactacaactagagcacgaatttcaa 17393684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 9303208 - 9303107
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||||||    
T  9303208 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaat 9303109  T
Q  114 tt 115  Q
    ||    
T  9303108 tt 9303107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 11402752 - 11402840
Alignment:
Q  30 catgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    ||||||| || |||||||||| |||||||||| ||| ||||||||| | ||| ||||||||||| ||| || || ||||||||||||||    
T  11402752 catgaacatgaaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcactataatatgagcacgaatttcaa 11402840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 37915361 - 37915290
Alignment:
Q  47 atcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    ||||||||||||||| |||||| ||||||||||||  |||||||||| |||||||   ||||||||||||||    
T  37915361 atcatcaacaattcaattaacaacaaattaacatacccaaacatatcactacaactagagcacgaatttcaa 37915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 8275953 - 8275852
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| | |  |||||||||| |||||| |||| | | ||||  |||||||||    
T  8275953 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcgttcaattaacatactcaaacttatcaccaaaacaagagcacgaat 8275854  T
Q  114 tt 115  Q
    ||    
T  8275853 tt 8275852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 16934082 - 16934010
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaa 86  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| ||||    
T  16934082 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaa 16934010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 8268849 - 8268752
Alignment:
Q  18 attttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaattt 115  Q
    |||||||||||| |||||| ||  ||||||||| |||||||||||||| | |  |||||||||| |||||| |||| | | ||||  |||||||||||    
T  8268849 attttcatacattatgaacatgttatttcatcaccaacaattcatttatcgttcaattaacatactcaaacttatcaccaaaacaagagcacgaattt 8268752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 38375798 - 38375693
Alignment:
Q  13 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaa 112  Q
    |||||||||||| | || |||||| ||||||||||||  |||||||||| ||| ||||||||| |  || |||||||||||   | ||||  ||||||||    
T  38375798 tacccattttcacaaattatgaacatgcaatttcatctacaacaattcaattatcatcaaattcatgtactcaaacatatcatcataacaagagcacgaa 38375699  T
Q  113 tttcaa 118  Q
    ||||||    
T  38375698 tttcaa 38375693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 10913031 - 10913136
Alignment:
Q  13 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaa 112  Q
    |||||||||||| | || ||| || ||||||||||||| |||||||||| ||| || |||||| |  || |||||||||||   | ||||  ||||||||    
T  10913031 tacccattttcacatattatggacatgcaatttcatcaacaacaattcaattatcaccaaattcatgtactcaaacatatcatcataacaagagcacgaa 10913130  T
Q  113 tttcaa 118  Q
    ||||||    
T  10913131 tttcaa 10913136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15861548 - 15861418
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15861548 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 15861449  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  15861448 cataagcacgaatttcaaagattgggttcat 15861418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22367151 - 22367281
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22367151 taatttacaaactactcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 22367250  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  22367251 cataagcacgaatttcaaagattgggttcat 22367281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 44035093 - 44034963
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  44035093 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatatctacaa 44034994  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||| || ||||||||||||||||||||||    
T  44034993 cataaacaagaatttcaaagattgggttcat 44034963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21860144 - 21860274
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  21860144 taatttacaaactactcattttcattcatcatgaacttgcaatttcatcattaacaattcatttaacatcaaattaacatattcaaacatatctctacca 21860243  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||| ||||||||||||||||||||||||    
T  21860244 cataagtacgaatttcaaagattgggttcat 21860274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 20254463 - 20254539
Alignment:
Q  17 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| ||||    
T  20254463 cattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatc 20254539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 21650148 - 21650076
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaa 86  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| ||||    
T  21650148 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaa 21650076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 40436367 - 40436266
Alignment:
Q  17 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttc 116  Q
    |||||||| | || |||||| ||||||||||||| |||||||||| ||| || ||| || | |||||||||||||||   | ||||  ||||||||||||    
T  40436367 cattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatatattcaaacatatcatcataacaagagcacgaatttc 40436268  T
Q  117 aa 118  Q
    ||    
T  40436267 aa 40436266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 6665 - 6535
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6665 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttgacatcaaattaacatattcaaacatatctctacaa 6566  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  6565 cataagcacgaatttcaaagattgggttcat 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24385874 - 24385744
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24385874 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattatcatattcaaacatatctctacaa 24385775  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  24385774 cataagcacgaatttcaaagattgggttcat 24385744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 41506931 - 41506801
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41506931 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 41506832  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||| ||||||||||||||||||||    
T  41506831 cataagcacggatttcaaagattgggttcat 41506801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 39115408 - 39115538
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39115408 taatttacaaattacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctttacaa 39115507  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||||| |||||||||||||||||    
T  39115508 cataagcacgaatgtcaaagattgggttcat 39115538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 274576 - 274706
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  274576 taatttacaaactacacattttcatacatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctacca 274675  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||| ||||||||||||||||||||||||||    
T  274676 catacgcacgaatttcaaagattgggttcat 274706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 641273 - 641143
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  641273 taatttacaaactacacattttcatacatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctacca 641174  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||| ||||||||||||||||||||||||||    
T  641173 catacgcacgaatttcaaagattgggttcat 641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 827079 - 826949
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  827079 taatttacaaactacacattttcatacatcatgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctacca 826980  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||| ||||||||||||||||||||||||||    
T  826979 catacgcacgaatttcaaagattgggttcat 826949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22321568 - 22321438
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22321568 taatttacaaactacccattttcatacgtcatgaacttgcaatttcatcatcaacaattcaattaacatcaaattaacatattcaaacatatctctacaa 22321469  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    | | |||||||||||||||||||||||||||    
T  22321468 cctgagcacgaatttcaaagattgggttcat 22321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24716984 - 24716854
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24716984 taatttacaaactatccattttcatacatcgtgaacttgcaatttcattatcaacaattcatttaacatcaaattaacatattcaaacatatctctacca 24716885  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
     |||| |||||||||||||||| ||||||||    
T  24716884 tataaccacgaatttcaaagatcgggttcat 24716854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 21259612 - 21259484
Alignment:
Q  2 aatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaac 101  Q
    |||| |||||||||||||||  ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  21259612 aattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatcactacaac 21259513  T
Q  102 ataagcacgaatttcaaagattgggttca 130  Q
    || |||||||||||||||  |||||||||    
T  21259512 atgagcacgaatttcaaaagttgggttca 21259484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17502294 - 17502424
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| ||||||||||| |||  ||||||||||||| |||||||||||||| ||||||||| | | ||||||||||||||| ||||||||||| ||||||    
T  17502294 taattcacaaactacccttttatatacatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatcactacaa 17502393  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||| ||||| |||||||||||||||||||||    
T  17502394 catgagcacaaatttcaaagattgggttcat 17502424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4233988 - 4234117
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| |||||||||||||||  ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||| ||||||||||| || |||    
T  4233988 taattcacaaactacccatttatatacatcataaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatcactgcaa 4234087  T
Q  101 cataagcacgaatttcaaagattgggttca 130  Q
    ||| ||||| ||||||||||||||||||||    
T  4234088 catgagcacaaatttcaaagattgggttca 4234117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16039003 - 16038916
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaac 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||    
T  16039003 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacatactcaaac 16038916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23218010 - 23218139
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| |||||||| ||||||  ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||| ||||||||||| |||| |    
T  23218010 taattcacaaactagccatttatatacatcattaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatcactacca 23218109  T
Q  101 cataagcacgaatttcaaagattgggttca 130  Q
    |||||||||||||||||||  |||||||||    
T  23218110 cataagcacgaatttcaaaagttgggttca 23218139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 21494573 - 21494452
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||||| ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||  |||| | | ||||  |||||    
T  21494573 aactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaattatcaccaaaacaagagcac 21494474  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||||||||||||||||    
T  21494473 gaaattcaaagattgggttcat 21494452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 18118376 - 18118281
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagatt 123  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||  |||||||||||||| ||||  |||||||||||||| ||||    
T  18118376 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaatttatatacgcaaacatatctctataacacgagcacgaatttcaacgatt 18118281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 22886473 - 22886590
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||  | | ||||  ||||||||     
T  22886473 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttattaccaaaacaagagcacgaaa 22886572  T
Q  114 ttcaaagattgggttcat 131  Q
    |||||||||||| |||||    
T  22886573 ttcaaagattggattcat 22886590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 22147585 - 22147686
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||||||    
T  22147585 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaat 22147684  T
Q  114 tt 115  Q
    ||    
T  22147685 tt 22147686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 18612555 - 18612654
Alignment:
Q  16 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaattt 115  Q
    |||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||||||||    
T  18612555 ccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaattt 18612654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 18619460 - 18619562
Alignment:
Q  16 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaattt 115  Q
    |||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||||||| |    
T  18619460 ccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaatnt 18619559  T
Q  116 caa 118  Q
    |||    
T  18619560 caa 18619562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 16002132 - 16002223
Alignment:
Q  2 aatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    |||||||||  ||| |||||||| | ||||||||| | ||||||||||| |||||||| | ||| ||||||||| | ||| |||||||||||    
T  16002132 aatttacaatatactcattttcacatatcatgaacatacaatttcatcaacaacaattaaattatcatcaaattcatatactcaaacatatc 16002223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 2545089 - 2545167
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaac 88  Q
    ||||||||||||||| |||| |||||  ||  ||||||||| |||||||||||||| |||  |||||||||| ||||||    
T  2545089 aactacccattttcacacattatgaatatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaac 2545167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 3431386 - 3431272
Alignment:
Q  17 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttc 116  Q
    ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||| | |||| | | ||||  ||||||||  |     
T  3431386 cattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaatcttatcaccaaaacaagagcacgaaaatt 3431287  T
Q  117 aaagattgggttcat 131  Q
    | |||||||||||||    
T  3431286 agagattgggttcat 3431272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 126548 - 126678
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  126548 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctgcaa 126647  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  126648 cataagcacgaatttcaaagattgggttcat 126678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 111391 - 111261
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  111391 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatattcaaacatatctctacaa 111292  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||||||||||| |||||||||||    
T  111291 cataagcacgaatttcaaatattgggttcat 111261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2029054 - 2029184
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2029054 taatttacaaactacccattttcgtacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaa 2029153  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  2029154 cataagcacgaatttcaaagattgggttcat 2029184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32494168 - 32494038
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32494168 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctacaa 32494069  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||| |||||||||||||||||||||||||    
T  32494068 cataaacacgaatttcaaagattgggttcat 32494038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 42056411 - 42056281
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  42056411 taattcacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaa 42056312  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  42056311 cataagcacgaatttcaaagattgggttcat 42056281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2190308 - 2190182
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  2190308 taatttacaaactatccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaa 2190209  T
Q  101 cataagcacgaatttcaaagattgggt 127  Q
    |||||||||||||||||||||||||||    
T  2190208 cataagcacgaatttcaaagattgggt 2190182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3049716 - 3049845
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3049716 taatttacaaactacccatattcatacatcatgaacttgcaatttcatcatcc-caattcatttaacatcaaattaacatattcaaacatatctctacaa 3049814  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
     |||| |||||||||||||||||||||||||    
T  3049815 tataaacacgaatttcaaagattgggttcat 3049845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1937134 - 1937009
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  1937134 taatttacaaactacccatttt-----atcatgaacttgcaatttcatcatgaacaattcatttaacatcaaattaacatattcaaacatatctctacca 1937040  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  1937039 cataagcacgaatttcaaagattgggttcat 1937009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39291631 - 39291513
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| |||||||||||||||  ||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||    
T  39291631 taattcacaaactacccatttatatacatcatcaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatcactacaa 39291532  T
Q  101 cataagcacgaatttcaaa 119  Q
    ||| |||||||||||||||    
T  39291531 catgagcacgaatttcaaa 39291513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 13352095 - 13352214
Alignment:
Q  11 actacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacg 110  Q
    |||||||||||  ||||||||||||| |||||||||| ||||||||| |||  || ||||||||||||||| | ||||||||| ||||||||| ||||||    
T  13352095 actacccatttatatacatcatgaacatgcaatttcaccatcaacaaatcaaatatcatcaaattaacatactgaaacatatcactacaacatgagcacg 13352194  T
Q  111 aatttcaaagattgggttca 130  Q
    |||||||| | |||||||||    
T  13352195 aatttcaagggttgggttca 13352214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 15516901 - 15516854
Alignment:
Q  84 caaacatatctctacaacataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15516901 caaacatatctctacaacataagcacgaatttcaaagattgggttcat 15516854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 15977940 - 15977845
Alignment:
Q  24 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaa 119  Q
    ||||| ||||||| ||||||||||||||||| |||||| ||| || |||||||||||| ||||||||||| |||||||   |||| ||||||||||    
T  15977940 atacaccatgaacatgcaatttcatcatcaataattcaattatcaacaaattaacatactcaaacatatcactacaactagagcatgaatttcaaa 15977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 17984827 - 17984753
Alignment:
Q  44 ttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    |||||||||||||||||| ||| || ||||||||||||  |||||||||| ||| ||||  ||||||||||||||    
T  17984827 ttcatcatcaacaattcaattatcaacaaattaacatacccaaacatatcactaaaacaagagcacgaatttcaa 17984753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 18151399 - 18151309
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    ||||||||| | ||| ||| |||||||||||||| ||| || ||||||||||||   || |||||| ||||||||| ||||||||||||||    
T  18151399 atcatgaacatacaaattcgtcatcaacaattcaattatcaacaaattaacatacctaatcatatcactacaacatgagcacgaatttcaa 18151309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 371236 - 371353
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||| | |||| | | ||||  ||||||||     
T  371236 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaatcttatcaccaaaacaagagcacgaaa 371335  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  371336 attagagattgggttcat 371353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 8563434 - 8563369
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | ||| |||||||||||    
T  8563434 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatc 8563369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 15575920 - 15575874
Alignment:
Q  44 ttcatcatcaacaattcatttaacatcaaattaacatattcaaacat 90  Q
    |||||||||||||| | | |||||||||||||||||||| |||||||    
T  15575920 ttcatcatcaacaacttaattaacatcaaattaacatatccaaacat 15575874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 45149729 - 45149834
Alignment:
Q  13 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaa 112  Q
    |||||||||||| | ||  ||||| ||||||||||||| |||||||||| ||| || ||| || |  || |||||||||||  || ||||  ||||||||    
T  45149729 tacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcattataacaagagcacgaa 45149828  T
Q  113 tttcaa 118  Q
    ||||||    
T  45149829 tttcaa 45149834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9653018 - 9652888
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9653018 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 9652919  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||| |||||||||||||||||||||||||    
T  9652918 cataaccacgaatttcaaagattgggttcat 9652888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 21274171 - 21274041
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  21274171 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaa 21274072  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  21274071 cataagcacgaatttcaaagattgggttcat 21274041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22274855 - 22274985
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22274855 taatttacaaacaacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacca 22274954  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  22274955 cataagcacgaatttcaaagattgggttcat 22274985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22284088 - 22284218
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  22284088 taatttactaactattcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacattaaattaacatattcaaacatatctctacca 22284187  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||| ||||||    
T  22284188 cataagcacgaatttcaaagattgagttcat 22284218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 25213195 - 25213311
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  25213195 acccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacatatccaaacatatctctacaacataagcacgaat 25213293  T
Q  114 ttcaaagattgggttcat 131  Q
    ||||||||||||||||||    
T  25213294 ttcaaagattgggttcat 25213311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 7321651 - 7321779
Alignment:
Q  2 aatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaac 101  Q
    |||| |||||||||||||||  ||||||||| ||| || ||||||||||| || |||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  7321651 aattcacaaactacccatttatatacatcataaacatgaaatttcatcataaaaaattcaattatcatcaaattaacatactcaaacatatcactacaac 7321750  T
Q  102 ataagcacgaatttcaaagattgggttca 130  Q
    || |||||||||||||||  |||||||||    
T  7321751 atgagcacgaatttcaaaagttgggttca 7321779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 20279571 - 20279666
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagatt 123  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||  |||||||||||||| ||||| |||||||||||||| ||||    
T  20279571 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatacccaaacatatctctataacatgagcacgaatttcaacgatt 20279666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 15633356 - 15633477
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||    
T  15633356 aactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcac 15633455  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| |||||  |||||||||||    
T  15633456 gaaattcaagaattgggttcat 15633477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 28031351 - 28031230
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| ||   |||||||||| | |||| |||| | | ||||  |||||    
T  28031351 aactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacatactaaaacttatcaccaaaacaagagcac 28031252  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||||||||||||||||    
T  28031251 gaaattcaaagattgggttcat 28031230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 33128191 - 33128308
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||||||     
T  33128191 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaa 33128290  T
Q  114 ttcaaagattgggttcat 131  Q
     | |||||||||||||||    
T  33128291 attaaagattgggttcat 33128308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 24826827 - 24826710
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||||||     
T  24826827 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaa 24826728  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  24826727 attagagattgggttcat 24826710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 17204478 - 17204595
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| ||||||||||||||  ||  |||||||||| |||| | |||| | | ||||  ||||||||     
T  17204478 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatgatgcaattaacatactcaatcttatcaccaaaacaagagcacgaaa 17204577  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  17204578 attagagattgggttcat 17204595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 25595168 - 25595245
Alignment:
Q  16 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    ||||||||| | || ||| || ||||||||||||| |||||||||||||| || |||||| |  || |||||||||||    
T  25595168 ccattttcacatattatggacatgcaatttcatcaacaacaattcatttatcaccaaattcatgtactcaaacatatc 25595245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13508 - 13378
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  13508 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaa 13409  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  13408 cataagcacgaatttcaaagattgggttcat 13378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21482 - 21432
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcat 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21482 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcat 21432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 31402 - 31272
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  31402 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaa 31303  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  31302 cataagcacgaatttcaaagattgggttcat 31272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30227 - 30357
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30227 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 30326  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||| ||||||||||||| ||||||||    
T  30327 cataagcatgaatttcaaagatagggttcat 30357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 41442 - 41572
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  41442 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaa 41541  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  41542 cataagcacgaatttcaaagattgggttcat 41572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 55714 - 55844
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55714 taatttacaaactacccattttcctacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaa 55813  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  55814 cataagcacgaatttcaaagattgggttcat 55844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 6205 - 6075
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  6205 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcattaacaaatcatttaacatcaaattaacatattcaaacacatctctacaa 6106  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  6105 cataagcacgaatttcaaagattgggttcat 6075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 5923 - 5869
Alignment:
Q  77 acatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcat 5869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1100 - 970
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  1100 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaacctctacaa 1001  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  1000 cataagcacgaatttcaaagattgggttcat 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 10093 - 9975
Alignment:
Q  13 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10093 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaa 9994  T
Q  113 tttcaaagattgggttcat 131  Q
    |||||||||||||||||||    
T  9993 tttcaaagattgggttcat 9975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17526 - 17396
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  17526 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaaaatcaaattaacatattcaaacatatctctacca 17427  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||| |||||||||||||||||||||    
T  17426 cataagcactaatttcaaagattgggttcat 17396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 79997 - 80127
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  79997 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctacca 80096  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||| |||||||||||||||||||||    
T  80097 cataagcacaaatttcaaagattgggttcat 80127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15082 - 15212
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15082 taatttacaaaataaacattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacga 15181  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  15182 cataagcacgaatttcaaagattgggttcat 15212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 162300 - 162170
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  162300 taatttacaaactacccatttacatacatcatgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaa 162201  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  162200 cataagcacgaatttcaaagattgggttcat 162170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 166386 - 166256
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  166386 taatttacaaactacccatttacatacatcatgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaa 166287  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    |||||||||||||||||||||||||||||||    
T  166286 cataagcacgaatttcaaagattgggttcat 166256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12642 - 12510
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattca--tttaacatcaaattaacatattcaaacatatctctac 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||||||||||||||||||||||||    
T  12642 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcacattaatcatcaaattaacatattcaaacatatctctac 12543  T
Q  99 aacataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||||| |||||||||||||||||||||    
T  12542 aacataagcacaaatttcaaagattgggttcat 12510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 573 - 443
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  573 taatttacaaactattcattttcatacatcatgaacttgcaatttcatcatctacaattcatttaacatcaaattaacatattcaaatatatctctacaa 474  T
Q  101 cataagcacgaatttcaaagattgggttcat 131  Q
    ||||||||| ||||||||| |||||||||||    
T  473 cataagcacaaatttcaaatattgggttcat 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 193610 - 193515
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193610 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctct 193515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 186648 - 186560
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaaca 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186648 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaaca 186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 1616 - 1494
Alignment:
Q  8 caaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagc 107  Q
    |||||||| |||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||| |||    
T  1616 caaactactcatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatcactacaacatgagc 1517  T
Q  108 acgaatttcaaagattgggttca 130  Q
    |||||||||||||||||||||||    
T  1516 acgaatttcaaagattgggttca 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 239 - 368
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    ||||| ||||||||| |||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||    
T  239 taattcacaaactacacatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatcactacaa 338  T
Q  101 cataagcacgaatttcaaagattgggttca 130  Q
    ||| |||| |||||||||||||||||||||    
T  339 catgagcaagaatttcaaagattgggttca 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 44230 - 44107
Alignment:
Q  7 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataag 106  Q
    |||||||||  |||| |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||| ||    
T  44230 acaaactacttatttacatacatcatgaacatgcaatttcatcatcaacaattcaattaccatcaaattaacatactcaaacatatcactacaacatgag 44131  T
Q  107 cacgaatttcaaagattgggttca 130  Q
    ||||||||||||||||| ||||||    
T  44130 cacgaatttcaaagattaggttca 44107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 130703 - 130819
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||    
T  130703 acccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacgtatccaaacatatctctacaacatgagcacgaat 130801  T
Q  114 ttcaaagattgggttcat 131  Q
    ||||||||||||||||||    
T  130802 ttcaaagattgggttcat 130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 6017 - 6133
Alignment:
Q  2 aatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaac 101  Q
    |||| ||||||||||||||| | || ||||||||| |||||||||||||||||||||||| ||| |||||| |||||||| ||||||||||| |||||||    
T  6017 aattcacaaactacccatttacttatatcatgaacatgcaatttcatcatcaacaattcaattatcatcaatttaacatactcaaacatatcactacaac 6116  T
Q  102 ataagcacgaatttcaa 118  Q
    || ||||| ||||||||    
T  6117 atgagcacaaatttcaa 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9629 - 9515
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||   |||||||||| |||||| |||| | | ||    
T  9629 taatttacaaactacccattttcatacatcataaacttgcaatttcatcatcaacaattcatttagcaatcaattaacatactcaaacttatcaccaaaa 9530  T
Q  101 cataagcacgaattt 115  Q
    ||  |||||||||||    
T  9529 caagagcacgaattt 9515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 95120 - 95226
Alignment:
Q  9 aaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagca 108  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||    
T  95120 aaactatctattttcatacatcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagca 95219  T
Q  109 cgaattt 115  Q
    |||||||    
T  95220 cgaattt 95226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 17841 - 17962
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    |||||||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||    
T  17841 aactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcac 17940  T
Q  110 gaatttcaaagattgggttcat 131  Q
    ||| ||||||||||||||||||    
T  17941 gaaattcaaagattgggttcat 17962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3963 - 3841
Alignment:
Q  1 taatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaac----atatctct 96  Q
    ||||| |||||||||||||||  ||| ||||||||| |||||||||||||| ||||||||| | | ||||||||||||||| ||||||    ||||| ||    
T  3963 taattcacaaactacccatttatatatatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatatatcact 3864  T
Q  97 acaacataagcacgaatttcaaa 119  Q
    ||||||| |||||||||||||||    
T  3863 acaacatgagcacgaatttcaaa 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 5368 - 5485
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| ||   |||||||||| |||||| |||| | | ||||  ||||||||     
T  5368 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacatactcaaacttatcaccaaaacaagagcacgaaa 5467  T
Q  114 ttcaaagattgggttcat 131  Q
    ||||||||||||||||||    
T  5468 ttcaaagattgggttcat 5485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 5694 - 5580
Alignment:
Q  9 aaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagca 108  Q
    |||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||    
T  5694 aaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagca 5595  T
Q  109 cgaatttcaaagatt 123  Q
    |||| ||||||||||    
T  5594 cgaaattcaaagatt 5580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 61335 - 61218
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  ||||||||     
T  61335 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaaa 61236  T
Q  114 ttcaaagattgggttcat 131  Q
     | |||||||||||||||    
T  61235 attaaagattgggttcat 61218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 34525 - 34406
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcac 109  Q
    ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| ||||  || ||||  |||||    
T  34525 aactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcattaaaacaagagcac 34426  T
Q  110 gaatttcaaagattgggttc 129  Q
    ||| ||||| |||| |||||    
T  34425 gaaattcaaggattaggttc 34406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 42568 - 42617
Alignment:
Q  82 ttcaaacatatctctacaacataagcacgaatttcaaagattgggttcat 131  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  42568 ttcaaccatatctctaccacataagcacgaatttcaaagattgggttcat 42617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 165074 - 164973
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| |||| | | ||||  |||||||||    
T  165074 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatcaccaaaacaagagcacgaat 164975  T
Q  114 tt 115  Q
    ||    
T  164974 tt 164973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 11887 - 11970
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| ||||    
T  11887 aactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatc 11970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 49960 - 49877
Alignment:
Q  10 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 93  Q
    |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||| ||||    
T  49960 aactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaacttatc 49877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 6324 - 6207
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||| | |||| | | ||||  ||||||||     
T  6324 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaatcttatcaccaaaacaagagcacgaaa 6225  T
Q  114 ttcaaagattgggttcat 131  Q
     | | |||||||||||||    
T  6224 attagagattgggttcat 6207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 17422 - 17305
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| ||| || |||| | | ||||  || |||||     
T  17422 acccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcatacttatcaccaaaacaagagtacgaaa 17323  T
Q  114 ttcaaagattgggttcat 131  Q
     | |||||||||||||||    
T  17322 attaaagattgggttcat 17305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 981 - 877
Alignment:
Q  14 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaat 113  Q
    ||||||||||| | || |||||| ||||||||||||| |||||||||| ||| || |||||| |  || |||||||||||   | ||||  |||||||||    
T  981 acccattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaaattcatttactcaaacatatcatcataacaagagcacgaat 882  T
Q  114 ttcaa 118  Q
    |||||    
T  881 ttcaa 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 34535 - 34455
Alignment:
Q  38 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    |||||||||  |||||||| |||| ||| |||||| || ||||| ||||||||||| |||||||   ||||||||||||||    
T  34535 tgcaatttccacatcaacagttcagttatcatcaatttcacatactcaaacatatcactacaactagagcacgaatttcaa 34455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 20012 - 19932
Alignment:
Q  38 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    |||||||||  ||||||||||||| ||| |||||| || |||||  |||||||| | ||| ||||| ||||||||||||||    
T  20012 tgcaatttccacatcaacaattcaattatcatcaatttcacatacccaaacataacactaaaacatgagcacgaatttcaa 19932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 244920 - 244830
Alignment:
Q  29 tcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctct-acaacataagcacgaatttcaa 118  Q
    |||||||| | ||||||||||||| | |||||| ||| || ||||||||||||  ||||||||||| | | ||||  ||||||||||||||    
T  244920 tcatgaacatacaatttcatcatccataattcaattatcaacaaattaacatacccaaacatatctataaaaacaagagcacgaatttcaa 244830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 11041 - 10992
Alignment:
Q  41 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacat 90  Q
    ||||||||||||||||| ||| | ||||||||||| ||||| ||||||||    
T  11041 aatttcatcatcaacaactcaatcaacatcaaattcacatactcaaacat 10992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 7165 - 7112
Alignment:
Q  28 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 81  Q
    ||||||||| ||||| |||||||||||||||||| ||| || ||| ||||||||    
T  7165 atcatgaacatgcaaattcatcatcaacaattcaattatcaacaagttaacata 7112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 12688 - 12600
Alignment:
Q  30 catgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    ||||||| ||||||||||||||||| |||||| ||| || ||| ||||||||  ||| |||||| ||| |||   ||||| ||||||||    
T  12688 catgaacatgcaatttcatcatcaataattcaattatcaacaagttaacatacccaatcatatcactaaaactagagcacaaatttcaa 12600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 2853 - 2933
Alignment:
Q  38 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaa 118  Q
    |||||||||  ||||||||||||| ||| ||||| ||| |||||   ||||||||| |||||||   ||||||||||||||    
T  2853 tgcaatttctacatcaacaattcagttatcatcagattcacataccgaaacatatcactacaactagagcacgaatttcaa 2933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 116 times since January 2019
Visitors: 3270