View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0456_high_2 (Length: 425)
Name: NF0456_high_2
Description: NF0456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0456_high_2 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 44871383 - 44871174
Alignment:
Q |
16 |
tgtcaaaagagggagtatattttctgatggtatagtttgtaactgttgtcgtgttaatttcaccgtcagtggatttgaggctcatgctggttgtacaaga |
115 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
44871383 |
tgtcaaaagagggagtatattttctgatggtatagtttgtaactgttgtcgtgttaatttcaccgtcagtggatttgaggctcatgctggttgtacaaga |
44871284 |
T |
 |
Q |
116 |
cacagaccatccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagggaagcgcgtgatcaaaaggggagtcattgtattggggaag |
215 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
44871283 |
cacagaccatccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagggaagcgcgtgatcaaaaggggagtcattgtattggggaag |
44871184 |
T |
 |
Q |
216 |
caaattctga |
225 |
Q |
|
|
|||||||||| |
|
|
T |
44871183 |
caaattctga |
44871174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 230 - 419
Target Start/End: Complemental strand, 44871205 - 44871016
Alignment:
Q |
230 |
gggaatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgttctatttgtggctttggaggtgacttagtactatgtgatcgatgtc |
329 |
Q |
|
|
|||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
44871205 |
gggagtcattgtattggggaagcaaattctgaagcaaataacgacaatgtttgttctatttgtggctttggaggtgacttagtactatgtgatcgatgtc |
44871106 |
T |
 |
Q |
330 |
cttctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctgtccaacttgttgttgcaaaatatgctatc |
419 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
44871105 |
cttctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctgtccaacttgttgttgcaaaatatgctatc |
44871016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 128; Significance: 5e-66; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 232 - 419
Target Start/End: Complemental strand, 9820320 - 9820133
Alignment:
Q |
232 |
gaatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgttctatttgtggctttggaggtgacttagtactatgtgatcgatgtcct |
331 |
Q |
|
|
|||||||||||||| | ||| ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| |
|
|
T |
9820320 |
gaatcattgtgttgtcaaagaaaaatctgaagcaaataatgataatgtttgttctatttgtggttttggaggtgacttagcactatgtgatcgatgccct |
9820221 |
T |
 |
Q |
332 |
tctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctgtccaacttgttgttgcaaaatatgctatc |
419 |
Q |
|
|
|||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
9820220 |
tctgcattccacctaggttgtttaggtctcaatcgagttccaattggtgaatggttctgtccaacttgttgttgcaaaatatgctatc |
9820133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 232 - 419
Target Start/End: Original strand, 9853660 - 9853847
Alignment:
Q |
232 |
gaatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgttctatttgtggctttggaggtgacttagtactatgtgatcgatgtcct |
331 |
Q |
|
|
|||||||||||||| | ||| ||||||||||||||| || || |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| |
|
|
T |
9853660 |
gaatcattgtgttgtcaaagaaaattctgaagcaaagaatgataatgtttgttctatttgtggttttggaggtgacttagcactatgtgatcgatgccct |
9853759 |
T |
 |
Q |
332 |
tctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctgtccaacttgttgttgcaaaatatgctatc |
419 |
Q |
|
|
|||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
9853760 |
tctgcattccacctcggttgtttaggtctcaatcgagttccaattggtgaatggttctgtccaacttgttgttgcaaaatatgctatc |
9853847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 9820575 - 9820411
Alignment:
Q |
16 |
tgtcaaaagagggagtatattttctgatggtatagtttgtaactgttgtcgtgttaatttcaccgtcagtggatttgaggctcatgctggttgtacaaga |
115 |
Q |
|
|
|||||||||||| ||| | |||||||||| |||||||||| | ||||||| ||||| || || ||| || || ||| |||||||||||||||||||| |
|
|
T |
9820575 |
tgtcaaaagaggaagtttgttttctgatgctatagtttgtgattgttgtcatgttacctttactatcaccgggttcgagtctcatgctggttgtacaaga |
9820476 |
T |
 |
Q |
116 |
cacagaccatccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagggaagc |
180 |
Q |
|
|
|| |||||||||| |||||||||||||||||| ||||| || ||||| | |||||||||||||| |
|
|
T |
9820475 |
catagaccatccactagtatcttgttggaagatggaagatcgttgttggattgtcaaagggaagc |
9820411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 9853405 - 9853569
Alignment:
Q |
16 |
tgtcaaaagagggagtatattttctgatggtatagtttgtaactgttgtcgtgttaatttcaccgtcagtggatttgaggctcatgctggttgtacaaga |
115 |
Q |
|
|
|||||||||||| ||| | |||||||||| |||||||||| | ||||||| ||||| || || ||| || || ||| |||||||||||||||||||| |
|
|
T |
9853405 |
tgtcaaaagaggaagtttgttttctgatgctatagtttgtgattgttgtcatgttacctttactatcaccgggttcgagtctcatgctggttgtacaaga |
9853504 |
T |
 |
Q |
116 |
cacagaccatccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagggaagc |
180 |
Q |
|
|
|| |||||||||| |||||||||||||||||| ||||| || ||||| | |||||||||||||| |
|
|
T |
9853505 |
catagaccatccactagtatcttgttggaagatggaagatcgttgttggattgtcaaagggaagc |
9853569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 20683304 - 20683147
Alignment:
Q |
18 |
tcaaaagagggagtatattttctgatggtatagtttgtaactgttgtcgtgttaatttcaccgtcagtggatttgaggctcatgctggttgtacaagaca |
117 |
Q |
|
|
|||||||||| ||||||| |||||| |||||| |||| | ||||||| |||||| ||||| ||| ||| || ||||||||| |||||||||||| |
|
|
T |
20683304 |
tcaaaagaggaagtatatcttctgaatgtatagcttgtgattgttgtcatgttaaattcactctcaccatattcgatgctcatgcttcttgtacaagaca |
20683205 |
T |
 |
Q |
118 |
cagaccatccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagg |
175 |
Q |
|
|
|||||||||| |||||||| ||||| |||| || |||||||| || | ||||||| |
|
|
T |
20683204 |
tagaccatccaaaagtatcttcttggaggacgaaacttcattgttgaactatcaaagg |
20683147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 126; Significance: 8e-65; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 233 - 414
Target Start/End: Original strand, 47528596 - 47528777
Alignment:
Q |
233 |
aatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgttctatttgtggctttggaggtgacttagtactatgtgatcgatgtcctt |
332 |
Q |
|
|
||||||||| ||||||||| ||| | |||||||||||| || | |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |
|
|
T |
47528596 |
aatcattgtattgccgaagcaaactatgaagcaaataatgatactgtttgttctatttgtggttttggacgtgacatagtactatgtgatcgatgtcctt |
47528695 |
T |
 |
Q |
333 |
ctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctgtccaacttgttgttgcaaaatatg |
414 |
Q |
|
|
||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
47528696 |
ctgcattccacctcagttgtttagatcttgatcgagttccggatggtgattggttctgtccaacttgttgttgcaaaatatg |
47528777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 212 - 419
Target Start/End: Original strand, 47523227 - 47523434
Alignment:
Q |
212 |
gaagcaaattctgatgcagggaatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgttctatttgtggctttggaggtgacttag |
311 |
Q |
|
|
|||| ||||||||| | ||||||||| ||||||||| ||| ||||| ||||||||||||||| | ||||||||||||||||| || ||||||||| ||| |
|
|
T |
47523227 |
gaaggaaattctgaagtagggaatcactgtgttgccaaagcaaattatgaagcaaataacgatactgtttgttctatttgtgatttgggaggtgacatag |
47523326 |
T |
 |
Q |
312 |
tactatgtgatcgatgtccttctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctgtccaacttgttgttgcaaaat |
411 |
Q |
|
|
|||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||| |
|
|
T |
47523327 |
tactgtgtgatcaatgtccttctgcattccacctcagttgtttaggtctcgatcgagttccggatggcgattggttctgtccaacatgttgttgcaaaat |
47523426 |
T |
 |
Q |
412 |
atgctatc |
419 |
Q |
|
|
|||||||| |
|
|
T |
47523427 |
atgctatc |
47523434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 16 - 261
Target Start/End: Original strand, 47522896 - 47523150
Alignment:
Q |
16 |
tgtcaaaagagggagtatattttctgatggtatagtttgtaactgttgtcgtgttaatttcaccgtcagtggatttgaggctcatgctggttgtacaaga |
115 |
Q |
|
|
||||||||||||| || ||||||||||||| ||||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
T |
47522896 |
tgtcaaaagagggggtttattttctgatggcatagtttgtgattgttgtcgtgttaatttcaatgtcactggatttgaggctcatgctggttgtacaaga |
47522995 |
T |
 |
Q |
116 |
cacagaccatccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagggaag---------cgcgtgatcaaaaggggagtcattgta |
206 |
Q |
|
|
|| |||||| ||| |||||||||||||| ||| |||||||| ||||| | ||||||||||||| | |||||| ||||| ||| |||||||| |
|
|
T |
47522996 |
catagaccaaccactagtatcttgttgggagatggaaggtcgttgttggactgtcaaagggaagctcttagttcacgtgatgaaaagcggaatcattgta |
47523095 |
T |
 |
Q |
207 |
ttggggaagcaaattctgatgcagggaatcattgtgttgccgaaggaaattctga |
261 |
Q |
|
|
||| |||||||||||||| ||||||||||||||||||||| || ||||||||| |
|
|
T |
47523096 |
ttgctgaagcaaattctgaagcagggaatcattgtgttgcccaattaaattctga |
47523150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 47528416 - 47528570
Alignment:
Q |
26 |
gggagtatattttctgatggtatagtttgtaactgttgtcgtgttaatttcaccgtcagtggatttgaggctcatgctggttgtacaagacacagaccat |
125 |
Q |
|
|
|||||||||| || ||||||||| |||||| | |||||| |||||||||||| || ||||||| ||| |||||||||||||||||||| | | ||| |
|
|
T |
47528416 |
gggagtatatattgtgatggtattgtttgtgattgttgtaatgttaatttcactctcgctggatttaaggatcatgctggttgtacaagacctacatcat |
47528515 |
T |
 |
Q |
126 |
ccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagggaagc |
180 |
Q |
|
|
||| | ||||||| |||||||| |||||||| ||||| |||||||||||||||| |
|
|
T |
47528516 |
ccactggtatcttcttggaagatggaaggtcgttgttggaatgtcaaagggaagc |
47528570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 47550362 - 47550440
Alignment:
Q |
281 |
tgttctatttgtggctttggaggtgacttagtactatgtgatcgatgtccttctgcattccaccttggttgtttaggtc |
359 |
Q |
|
|
|||||| ||||||| ||||||||||||||| || |||||||| ||||||||||| | |||||| || ||||||||||| |
|
|
T |
47550362 |
tgttctgtttgtggttttggaggtgacttaatattatgtgatggatgtccttcttcgttccactctgattgtttaggtc |
47550440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 47523196 - 47523242
Alignment:
Q |
217 |
aaattctgatgcagggaatcattgtgttgccgaaggaaattctgaag |
263 |
Q |
|
|
||||||||| || |||||||||||||| ||||||||||||||||||| |
|
|
T |
47523196 |
aaattctgaagcggggaatcattgtgtcgccgaaggaaattctgaag |
47523242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 47550157 - 47550231
Alignment:
Q |
88 |
atttgaggctcatgctggttgtacaagacacagaccatccattagtatcttgttggaagacggaaggtcattgtt |
162 |
Q |
|
|
|||||||||||||||| ||||||||| || |||||||||| |||||||| ||| ||||| ||| |||||||| |
|
|
T |
47550157 |
atttgaggctcatgcttgttgtacaaaacctagaccatccaaaagtatcttcttgcaagacagaacttcattgtt |
47550231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 47523142 - 47523186
Alignment:
Q |
217 |
aaattctgatgcagggaatcattgtgttgccgaaggaaattctga |
261 |
Q |
|
|
||||||||| || |||||||||| |||||| |||||||||||||| |
|
|
T |
47523142 |
aaattctgacgcggggaatcattatgttgctgaaggaaattctga |
47523186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 69; Significance: 8e-31; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 86 - 419
Target Start/End: Original strand, 21081169 - 21081508
Alignment:
Q |
86 |
ggatttgaggctcatgctggttgtacaagacacagaccatccattagtatcttgttggaagacggaaggtcattgtttaaatgtcaaagggaagcgc--- |
182 |
Q |
|
|
||||| |||| ||||| || || ||||||||| |||||||||| ||||||||| || ||||| |||||||||||| ||||| ||| |||||| | |
|
|
T |
21081169 |
ggattagaggttcatgttgtttttacaagacatagaccatccactagtatctttatgaaagacaaaaggtcattgttggaatgttaaacggaagctccaa |
21081268 |
T |
 |
Q |
183 |
------gtgatcaaaaggggagtcattgtattggggaagcaaattctgatgcagggaatcattgtgttgccgaaggaaattctgaagcaaataacgacaa |
276 |
Q |
|
|
| ||||||||||||| ||||||| ||| |||| ||||||| | | ||||||||||||||||| || || ||||||| | | |||||| | | |
|
|
T |
21081269 |
gttagagcgatcaaaaggggaatcattgtgttgtcgaagaaaattcttaagaagggaatcattgtgttgtcgtagcaaattctaatgaaaataattata- |
21081367 |
T |
 |
Q |
277 |
tgtttgttctatttgtggctttggaggtgacttagtactatgtgatcgatgtccttctgcattccaccttggttgtttaggtcttgatcgagttccagat |
376 |
Q |
|
|
|||||||||||||||| ||||| |||||| | || |||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||| ||| |
|
|
T |
21081368 |
--tttgttctatttgtggttttgggggtgacacaatattatgtgatcgatgtccttctgcattccaccgctgttctttaggtctcgatggagttttggat |
21081465 |
T |
 |
Q |
377 |
ggtgattggttctgtccaacttgttgttgcaaaatatgctatc |
419 |
Q |
|
|
|||||| ||| ||||||||||| | ||||||||||| |||| |
|
|
T |
21081466 |
agtgattagtttcgtccaacttgtggctgcaaaatatgttatc |
21081508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 200 - 419
Target Start/End: Complemental strand, 21080985 - 21080769
Alignment:
Q |
200 |
cattgtattggggaagcaaattctgatgcagggaatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgttctatttgtggctttg |
299 |
Q |
|
|
|||||||||| |||| ||||| ||| ||||| ||||||||||||| ||| | | |||| ||| |||||| | |||||||| |||||| ||| |||| |
|
|
T |
21080985 |
cattgtattgccgaagaaaattttgaagcaggaaatcattgtgttgtcgatgcattttctaaagaaaataatg---atgtttgtcctatttttggttttg |
21080889 |
T |
 |
Q |
300 |
gaggtgacttagtactatgtgatcgatgtccttctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctgtccaacttg |
399 |
Q |
|
|
| ||||| ||||||| |||||| | |||| |||| |||| ||| ||||||||||||||| ||||||||| |||||||||||||||| || || ||| |
|
|
T |
21080888 |
gttgtgacatagtactttgtgattggtgtctttcttcattaaaccatggttgtttaggtctcaatcgagttctggatggtgattggttctttcgaatttg |
21080789 |
T |
 |
Q |
400 |
ttgttgcaaaatatgctatc |
419 |
Q |
|
|
|||||||||||||||||||| |
|
|
T |
21080788 |
ttgttgcaaaatatgctatc |
21080769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 419
Target Start/End: Complemental strand, 21061601 - 21061376
Alignment:
Q |
191 |
aaggggagtcattgtattggggaagcaaattctgatgcagggaatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgttctattt |
290 |
Q |
|
|
||||||| |||||||||| |||||||||| ||| ||||| ||||||||||||| ||| | | || | ||| |||||| || ||||||| |||||| |
|
|
T |
21061601 |
aaggggaaccattgtattgccgaagcaaattttgaagcaggaaatcattgtgttgtcgatgcattttttaaagaaaataatga---tgtttgtcctattt |
21061505 |
T |
 |
Q |
291 |
gtggctttggaggtgacttagtactatgtgatcgatgtccttctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattggttctg |
390 |
Q |
|
|
||| ||||| ||||| ||||||| |||||| | |||| |||| |||| ||| ||||||||||||||| ||||||||| ||||| |||||||||| |
|
|
T |
21061504 |
ttggttttggttgtgacatagtactttgtgattggtgtctttcttcattaaaccatggttgtttaggtctcaatcgagttctggatggggattggttctt |
21061405 |
T |
 |
Q |
391 |
tccaacttgttgttgcaaaatatgctatc |
419 |
Q |
|
|
|| || ||||||||||||||||||||||| |
|
|
T |
21061404 |
tcgaatttgttgttgcaaaatatgctatc |
21061376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 185 - 419
Target Start/End: Original strand, 21061884 - 21062115
Alignment:
Q |
185 |
gatcaaaaggggagtcattgtattggggaagcaaattctgatgcagggaatcattgtgttgccgaaggaaattctgaagcaaataacgacaatgtttgtt |
284 |
Q |
|
|
||||||||||||| |||||| ||| |||| ||||||| | | ||||||||||||||||| || || ||||||| | | |||||| | | |||||| |
|
|
T |
21061884 |
gatcaaaaggggaaccattgtgttgctgaagaaaattcttaagaagggaatcattgtgttgtcgtagcaaattctaatgaaaataattata---tttgtt |
21061980 |
T |
 |
Q |
285 |
ctatttgtggctttggaggtgacttagtactatgtgatcgatgtccttctgcattccaccttggttgtttaggtcttgatcgagttccagatggtgattg |
384 |
Q |
|
|
|||||||||| ||||| |||||| | || |||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||| ||| |||||| |
|
|
T |
21061981 |
ctatttgtggttttgggggtgacacaatattatgtgatcgatgtccttctgcattccaccgctgttctttaggtctcgatggagttttggatagtgatta |
21062080 |
T |
 |
Q |
385 |
gttctgtccaacttgttgttgcaaaatatgctatc |
419 |
Q |
|
|
||| ||||||||||| | ||||||||||| |||| |
|
|
T |
21062081 |
gtttcgtccaacttgtggctgcaaaatatgttatc |
21062115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 123 times since January 2019
Visitors: 3258