View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0456_high_9 (Length: 314)
Name: NF0456_high_9
Description: NF0456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0456_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 31 - 302
Target Start/End: Complemental strand, 19327718 - 19327447
Alignment:
| Q |
31 |
tctcttccatacatggtctctttcaatgatttggacaaattttgacaatgccaaaacagaggaaatacaaggagttatctcagcacttattcagttttat |
130 |
Q |
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| T |
19327718 |
tctcttccatacatggtctctttcaatgatttggacaaattttgacaatgccaaaacagaggagatacaaggagttatctcagcacttattcagttttat |
19327619 |
T |
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| Q |
131 |
tatttnnnnnnntcctaaatttccctttttacgctatcgccgctgtatataaactgggatagcagccactatttcccgcgctggtttcatagcggattca |
230 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19327618 |
tatttaaaaaaatcctaaatttccctttttacgctatcgccgctgtatataaactgggatagcagccactatttcccgcgctggtttcatagcggattca |
19327519 |
T |
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| Q |
231 |
tcaaagtcagctatactatatagcgctgctatcgccactatttcacagcactatagtttttctatcaagaat |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19327518 |
tcaaagtcagctatactatatagcgctgctatcgccactatttcacagcactatagtttttctatcaagaat |
19327447 |
T |
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