View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0456_low_10 (Length: 335)
Name: NF0456_low_10
Description: NF0456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0456_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 94 - 321
Target Start/End: Complemental strand, 43367821 - 43367594
Alignment:
| Q |
94 |
aaaccaacattaagaccaaccaaatcctcagtactcactttcacaacctcttccggttccaacccatcaagcaccgaaaccaaacacgcacaaaaacctt |
193 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
43367821 |
aaaccaacattaagaccaaccaaatcctcagtactcactttcacaacctcttccggttccaacccatcaagcacccaaaccaaacacgcacaaaaacctt |
43367722 |
T |
|
| Q |
194 |
tcgtgatctccgaatcactatctgccgttaatctcaccttcccttcaccgtcgatcttcacctccacccacactctagccgtacaccccatgactcggtt |
293 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43367721 |
tcgtgatctccgaatcactatccgccgttaatctcaccttcccttcaccgtcgatcttcacctccacccacactctagccgtacaccccatgactcggtt |
43367622 |
T |
|
| Q |
294 |
cctgtcaacacgcgctgtctcctccatc |
321 |
Q |
| |
|
|||||||||||||||||||||||||||| |
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| T |
43367621 |
cctgtcaacacgcgctgtctcctccatc |
43367594 |
T |
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