View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0457_low_11 (Length: 315)
Name: NF0457_low_11
Description: NF0457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0457_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 37429584 - 37429405
Alignment:
| Q |
80 |
agtaatgtcactgcccaattctgtactcccactaatatcggtcccactattatttgaagatgagcaccgaggggatggatgaaaagaaatttgttttgag |
179 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
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| T |
37429584 |
agtaatgtcactgcccaattctgtactcccactaatgtcggtcccactattatttgaagatgagtaccaaggggatggatgaaaagaaatttgttttgag |
37429485 |
T |
|
| Q |
180 |
gcctgttcctcatttgtggcaggagactttttagcagctc-atctgcttcacttgcttgtgatggtggaattcttttctg |
258 |
Q |
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|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
37429484 |
gcctgttcctcatttgtggcaggagactttgtagcagctctttctgcttcacttgcttgtgatggtggaattcttttctg |
37429405 |
T |
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