View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0462_high_1 (Length: 621)

Name: NF0462_high_1
Description: NF0462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0462_high_1
NF0462_high_1
[»] chr8 (55 HSPs)
chr8 (447-611)||(36119403-36119567)
chr8 (249-434)||(43599303-43599489)
chr8 (249-435)||(10989167-10989354)
chr8 (249-436)||(15010955-15011143)
chr8 (244-435)||(33435670-33435860)
chr8 (311-435)||(8559572-8559696)
chr8 (310-434)||(33435875-33435999)
chr8 (311-435)||(20760649-20760773)
chr8 (338-436)||(12941560-12941658)
chr8 (322-432)||(35561660-35561770)
chr8 (310-428)||(36039782-36039900)
chr8 (311-435)||(30176453-30176577)
chr8 (310-434)||(40902381-40902505)
chr8 (317-435)||(36037185-36037299)
chr8 (311-434)||(10989023-10989146)
chr8 (370-429)||(30117484-30117543)
chr8 (355-434)||(43901050-43901129)
chr8 (330-436)||(18313774-18313880)
chr8 (311-434)||(22451336-22451463)
chr8 (311-436)||(16454624-16454749)
chr8 (320-433)||(42228764-42228877)
chr8 (311-434)||(15010810-15010934)
chr8 (355-434)||(5720900-5720979)
chr8 (249-398)||(35561486-35561637)
chr8 (330-419)||(26122752-26122841)
chr8 (311-413)||(3183900-3184002)
chr8 (317-418)||(34248085-34248186)
chr8 (355-435)||(15968097-15968179)
chr8 (311-418)||(18905864-18905971)
chr8 (355-434)||(45122303-45122381)
chr8 (337-434)||(4195965-4196063)
chr8 (364-434)||(25186764-25186834)
chr8 (389-434)||(8559745-8559790)
chr8 (317-418)||(34248367-34248468)
chr8 (311-396)||(36997196-36997281)
chr8 (355-426)||(3895131-3895202)
chr8 (375-434)||(8559852-8559910)
chr8 (355-434)||(15968461-15968540)
chr8 (311-418)||(32931409-32931516)
chr8 (358-428)||(8056273-8056343)
chr8 (369-434)||(5496553-5496618)
chr8 (311-435)||(15856964-15857089)
chr8 (389-434)||(15857171-15857216)
chr8 (317-433)||(8056482-8056598)
chr8 (394-434)||(43599510-43599550)
chr8 (355-434)||(3895372-3895450)
chr8 (311-418)||(21085137-21085244)
chr8 (311-418)||(21653335-21653442)
chr8 (311-418)||(21653812-21653919)
chr8 (311-386)||(22277564-22277639)
chr8 (350-433)||(37537123-37537206)
chr8 (311-418)||(43984305-43984412)
chr8 (388-434)||(30065983-30066029)
chr8 (317-418)||(23027823-23027924)
chr8 (330-434)||(39124916-39125020)
[»] chr7 (77 HSPs)
chr7 (249-436)||(9378783-9378971)
chr7 (249-435)||(13310351-13310538)
chr7 (249-434)||(23396601-23396787)
chr7 (249-435)||(40703785-40703972)
chr7 (310-434)||(6783030-6783154)
chr7 (311-434)||(33855683-33855806)
chr7 (285-428)||(31374763-31374907)
chr7 (337-434)||(9378992-9379089)
chr7 (311-434)||(23821665-23821788)
chr7 (319-434)||(35866636-35866751)
chr7 (285-434)||(16564886-16565036)
chr7 (285-434)||(16600626-16600776)
chr7 (318-436)||(39808593-39808711)
chr7 (311-432)||(6813067-6813188)
chr7 (340-436)||(6782816-6782912)
chr7 (356-435)||(6751743-6751822)
chr7 (355-434)||(16565090-16565169)
chr7 (355-434)||(16600493-16600572)
chr7 (355-434)||(31357708-31357787)
chr7 (356-434)||(6751539-6751617)
chr7 (340-434)||(29252568-29252662)
chr7 (309-418)||(1661178-1661287)
chr7 (317-434)||(40703647-40703764)
chr7 (355-435)||(33833941-33834021)
chr7 (259-434)||(38948350-38948525)
chr7 (249-434)||(6813211-6813395)
chr7 (355-434)||(22841044-22841123)
chr7 (369-435)||(5775873-5775939)
chr7 (338-434)||(2179646-2179743)
chr7 (370-434)||(48113989-48114053)
chr7 (285-434)||(258423-258571)
chr7 (355-434)||(4258033-4258112)
chr7 (285-427)||(8681883-8682026)
chr7 (355-434)||(33834147-33834226)
chr7 (277-430)||(43565960-43566113)
chr7 (377-434)||(23390582-23390639)
chr7 (366-434)||(33855473-33855541)
chr7 (317-429)||(36621019-36621130)
chr7 (366-434)||(43366399-43366467)
chr7 (379-434)||(4258261-4258316)
chr7 (359-434)||(10903314-10903389)
chr7 (359-434)||(10903521-10903596)
chr7 (311-426)||(23396814-23396929)
chr7 (324-434)||(5266351-5266461)
chr7 (369-426)||(47856038-47856095)
chr7 (311-418)||(1663593-1663701)
chr7 (311-434)||(2232087-2232211)
chr7 (317-397)||(29780176-29780256)
chr7 (331-435)||(36237793-36237897)
chr7 (330-418)||(37272053-37272141)
chr7 (317-412)||(7135238-7135333)
chr7 (391-434)||(23821540-23821583)
chr7 (389-443)||(6214302-6214356)
chr7 (355-412)||(29645829-29645886)
chr7 (318-411)||(39808460-39808553)
chr7 (321-418)||(43384279-43384376)
chr7 (375-435)||(21557007-21557067)
chr7 (330-418)||(27585264-27585352)
chr7 (310-386)||(28910072-28910148)
chr7 (330-434)||(40137704-40137808)
chr7 (311-418)||(12578449-12578556)
chr7 (320-427)||(24426752-24426858)
chr7 (355-434)||(29646056-29646135)
chr7 (317-412)||(43288278-43288373)
chr7 (317-412)||(43288546-43288641)
chr7 (356-434)||(30768410-30768488)
chr7 (324-418)||(34748786-34748880)
chr7 (317-418)||(257262-257363)
chr7 (336-417)||(14691081-14691162)
chr7 (317-390)||(40703406-40703479)
chr7 (317-393)||(12518165-12518241)
chr7 (310-398)||(34590556-34590644)
chr7 (322-418)||(36092599-36092695)
chr7 (310-410)||(43167881-43167981)
chr7 (330-418)||(43383954-43384042)
chr7 (317-393)||(48116291-48116367)
chr7 (368-412)||(49040580-49040624)
[»] chr5 (71 HSPs)
chr5 (259-438)||(18914304-18914484)
chr5 (249-435)||(13413575-13413761)
chr5 (249-434)||(38376723-38376909)
chr5 (249-435)||(20720476-20720663)
chr5 (259-428)||(40168977-40169147)
chr5 (249-434)||(43490389-43490575)
chr5 (249-432)||(3015549-3015731)
chr5 (310-434)||(18914149-18914273)
chr5 (249-427)||(34457095-34457274)
chr5 (317-434)||(28358030-28358147)
chr5 (310-426)||(35526976-35527092)
chr5 (311-434)||(3015406-3015529)
chr5 (311-434)||(34457295-34457418)
chr5 (311-436)||(3762896-3763021)
chr5 (249-435)||(48237-48422)
chr5 (311-434)||(24125054-24125177)
chr5 (310-435)||(35527262-35527388)
chr5 (317-434)||(48099-48216)
chr5 (317-434)||(2908557-2908674)
chr5 (339-434)||(43490273-43490368)
chr5 (259-434)||(2908705-2908881)
chr5 (249-434)||(28156028-28156211)
chr5 (355-435)||(39268009-39268089)
chr5 (311-434)||(15287045-15287168)
chr5 (376-434)||(18107532-18107590)
chr5 (330-432)||(30330643-30330745)
chr5 (355-434)||(36878318-36878397)
chr5 (311-418)||(38131772-38131879)
chr5 (320-434)||(18107825-18107939)
chr5 (366-432)||(32501205-32501271)
chr5 (309-434)||(11632423-11632548)
chr5 (321-434)||(37656731-37656844)
chr5 (321-434)||(37781843-37781956)
chr5 (330-434)||(395359-395463)
chr5 (330-434)||(39268218-39268322)
chr5 (285-434)||(36307885-36308034)
chr5 (337-434)||(22732752-22732849)
chr5 (310-418)||(13844021-13844129)
chr5 (310-434)||(28156231-28156354)
chr5 (355-434)||(10668352-10668431)
chr5 (356-426)||(17135519-17135589)
chr5 (355-433)||(18873227-18873305)
chr5 (355-436)||(4563724-4563805)
chr5 (369-434)||(17130036-17130096)
chr5 (317-418)||(29432420-29432521)
chr5 (317-418)||(37995629-37995730)
chr5 (259-346)||(35527114-35527202)
chr5 (311-418)||(873685-873792)
chr5 (311-418)||(1028082-1028189)
chr5 (355-434)||(5127946-5128025)
chr5 (320-434)||(2716538-2716652)
chr5 (311-434)||(4296654-4296779)
chr5 (393-434)||(13413782-13413823)
chr5 (377-434)||(29008064-29008121)
chr5 (311-412)||(40168848-40168949)
chr5 (330-418)||(22196561-22196649)
chr5 (310-386)||(24994109-24994185)
chr5 (380-428)||(35527199-35527247)
chr5 (317-397)||(38663276-38663356)
chr5 (311-418)||(13843705-13843812)
chr5 (311-393)||(12965235-12965317)
chr5 (317-434)||(15286845-15286963)
chr5 (355-429)||(30870918-30870992)
chr5 (330-407)||(1892098-1892175)
chr5 (287-348)||(6918927-6918988)
chr5 (287-348)||(6919174-6919235)
chr5 (317-386)||(24918201-24918270)
chr5 (370-434)||(1893780-1893844)
chr5 (320-432)||(2716337-2716449)
chr5 (324-384)||(24792124-24792184)
chr5 (355-427)||(40961748-40961820)
[»] chr6 (49 HSPs)
chr6 (249-434)||(16876936-16877122)
chr6 (310-434)||(28149785-28149909)
chr6 (311-434)||(26098746-26098869)
chr6 (311-434)||(15102613-15102737)
chr6 (311-434)||(15102743-15102863)
chr6 (311-434)||(25999015-25999138)
chr6 (311-434)||(11313371-11313494)
chr6 (311-434)||(15101100-15101223)
chr6 (311-434)||(16590176-16590299)
chr6 (311-434)||(16605081-16605204)
chr6 (311-434)||(26098334-26098457)
chr6 (290-434)||(26098540-26098685)
chr6 (249-434)||(11316835-11317019)
chr6 (375-434)||(11317040-11317099)
chr6 (311-434)||(25998809-25998932)
chr6 (311-412)||(5269262-5269363)
chr6 (317-434)||(24558575-24558692)
chr6 (311-427)||(19291907-19292023)
chr6 (310-434)||(24558780-24558904)
chr6 (311-418)||(10418327-10418434)
chr6 (305-418)||(12134466-12134579)
chr6 (311-428)||(16876819-16876936)
chr6 (285-409)||(19712571-19712696)
chr6 (340-436)||(6623443-6623539)
chr6 (375-431)||(30526832-30526889)
chr6 (375-431)||(30539415-30539471)
chr6 (311-418)||(19054501-19054608)
chr6 (311-434)||(19712393-19712516)
chr6 (355-434)||(26394543-26394622)
chr6 (311-418)||(30539243-30539350)
chr6 (317-435)||(15293869-15293987)
chr6 (249-342)||(18494407-18494501)
chr6 (342-427)||(2902819-2902902)
chr6 (317-418)||(8144025-8144126)
chr6 (317-418)||(10733433-10733534)
chr6 (311-418)||(1744831-1744938)
chr6 (311-418)||(24055098-24055205)
chr6 (332-434)||(18494284-18494386)
chr6 (375-418)||(31926-31969)
chr6 (340-411)||(25184018-25184089)
chr6 (388-434)||(12124760-12124806)
chr6 (311-385)||(17147894-17147968)
chr6 (317-371)||(22911485-22911539)
chr6 (377-434)||(2923011-2923068)
chr6 (311-412)||(17096687-17096788)
chr6 (317-418)||(28072467-28072568)
chr6 (385-434)||(30527034-30527083)
chr6 (317-393)||(27914321-27914397)
chr6 (355-434)||(29742469-29742546)
[»] chr4 (91 HSPs)
chr4 (249-434)||(12016817-12017003)
chr4 (249-434)||(17077072-17077256)
chr4 (320-434)||(28245985-28246099)
chr4 (249-435)||(28245782-28245964)
chr4 (311-434)||(17076929-17077052)
chr4 (311-435)||(43943664-43943788)
chr4 (311-434)||(25753594-25753717)
chr4 (311-434)||(27634315-27634438)
chr4 (262-434)||(5488359-5488532)
chr4 (311-434)||(12016672-12016795)
chr4 (311-436)||(28395168-28395292)
chr4 (310-434)||(29113441-29113565)
chr4 (311-434)||(21498523-21498646)
chr4 (311-434)||(53863897-53864020)
chr4 (311-434)||(54210369-54210492)
chr4 (285-434)||(56511289-56511439)
chr4 (329-433)||(3055776-3055880)
chr4 (330-434)||(28497222-28497326)
chr4 (311-434)||(1922980-1923103)
chr4 (311-434)||(8559960-8560083)
chr4 (249-434)||(33629651-33629835)
chr4 (337-434)||(39110899-39110996)
chr4 (295-418)||(990555-990679)
chr4 (355-434)||(8304988-8305067)
chr4 (355-434)||(23350791-23350870)
chr4 (311-434)||(56511496-56511619)
chr4 (340-434)||(49380898-49380992)
chr4 (369-430)||(33629917-33629978)
chr4 (285-420)||(10390437-10390573)
chr4 (311-435)||(22865761-22865884)
chr4 (327-427)||(52827237-52827337)
chr4 (311-418)||(991212-991319)
chr4 (359-434)||(47491883-47491958)
chr4 (311-412)||(23018484-23018585)
chr4 (358-434)||(3640198-3640274)
chr4 (317-420)||(7892646-7892750)
chr4 (249-348)||(27634457-27634557)
chr4 (310-418)||(29669351-29669459)
chr4 (312-412)||(45426926-45427026)
chr4 (320-434)||(26806503-26806615)
chr4 (249-367)||(35399342-35399461)
chr4 (330-429)||(50307273-50307372)
chr4 (311-418)||(51469489-51469596)
chr4 (311-418)||(52214623-52214730)
chr4 (311-386)||(53386101-53386176)
chr4 (311-418)||(53740190-53740297)
chr4 (369-435)||(42312821-42312887)
chr4 (356-434)||(45684208-45684286)
chr4 (340-422)||(49380664-49380746)
chr4 (393-434)||(33629596-33629637)
chr4 (393-434)||(33629855-33629896)
chr4 (310-418)||(15665161-15665269)
chr4 (330-426)||(20093332-20093428)
chr4 (330-434)||(33797117-33797221)
chr4 (355-434)||(3640448-3640527)
chr4 (310-393)||(27048125-27048208)
chr4 (311-418)||(29669667-29669774)
chr4 (311-418)||(51470491-51470598)
chr4 (312-390)||(400373-400451)
chr4 (330-412)||(5212009-5212091)
chr4 (324-434)||(14945135-14945245)
chr4 (366-432)||(20441500-20441566)
chr4 (312-418)||(43972363-43972469)
chr4 (340-425)||(7806413-7806497)
chr4 (359-412)||(9758318-9758371)
chr4 (311-396)||(45427241-45427326)
chr4 (357-418)||(52810660-52810721)
chr4 (317-418)||(56509617-56509718)
chr4 (311-418)||(34205982-34206090)
chr4 (330-434)||(39110709-39110813)
chr4 (365-405)||(40197229-40197269)
chr4 (311-418)||(13254391-13254498)
chr4 (355-410)||(14115524-14115579)
chr4 (319-418)||(21497680-21497779)
chr4 (319-418)||(21498195-21498294)
chr4 (355-434)||(21647614-21647693)
chr4 (311-418)||(27048397-27048504)
chr4 (318-412)||(34206251-34206346)
chr4 (330-433)||(35565072-35565174)
chr4 (311-418)||(36558455-36558562)
chr4 (375-434)||(53559358-53559417)
chr4 (355-434)||(53720703-53720782)
chr4 (311-418)||(53738197-53738304)
chr4 (338-412)||(4645866-4645940)
chr4 (311-385)||(6778665-6778739)
chr4 (312-362)||(39910406-39910456)
chr4 (321-434)||(5065845-5065958)
chr4 (370-419)||(7198034-7198083)
chr4 (249-310)||(21498441-21498502)
chr4 (290-409)||(9938466-9938586)
chr4 (366-418)||(37288913-37288965)
[»] chr3 (85 HSPs)
chr3 (263-434)||(39078711-39078883)
chr3 (250-440)||(9264427-9264618)
chr3 (250-434)||(4191049-4191234)
chr3 (249-435)||(51642561-51642749)
chr3 (249-434)||(9264219-9264405)
chr3 (249-434)||(37058697-37058883)
chr3 (310-434)||(50692518-50692642)
chr3 (311-432)||(49477528-49477649)
chr3 (259-434)||(22407584-22407760)
chr3 (311-435)||(40230628-40230752)
chr3 (260-434)||(50692315-50692486)
chr3 (311-434)||(9264075-9264198)
chr3 (249-435)||(37223566-37223753)
chr3 (311-434)||(40230424-40230546)
chr3 (259-434)||(53640108-53640284)
chr3 (311-434)||(22339733-22339856)
chr3 (249-427)||(39956600-39956779)
chr3 (337-434)||(54495523-54495620)
chr3 (311-435)||(4029633-4029757)
chr3 (310-434)||(54591453-54591577)
chr3 (249-412)||(10758934-10759098)
chr3 (311-434)||(25627909-25628033)
chr3 (310-434)||(35011856-35011980)
chr3 (330-434)||(51338449-51338553)
chr3 (285-435)||(35011648-35011799)
chr3 (311-434)||(51642417-51642540)
chr3 (355-436)||(32034081-32034162)
chr3 (249-404)||(49477349-49477505)
chr3 (310-434)||(50338370-50338494)
chr3 (334-434)||(53639977-53640077)
chr3 (311-427)||(33909619-33909733)
chr3 (317-434)||(35015477-35015594)
chr3 (311-412)||(50203846-50203947)
chr3 (311-427)||(19820517-19820632)
chr3 (340-412)||(32215548-32215620)
chr3 (311-434)||(10758757-10758880)
chr3 (309-424)||(11414366-11414480)
chr3 (312-434)||(38421977-38422097)
chr3 (311-434)||(39956456-39956579)
chr3 (355-434)||(40926446-40926525)
chr3 (311-418)||(43101360-43101467)
chr3 (310-420)||(44461055-44461165)
chr3 (356-438)||(53761432-53761514)
chr3 (317-434)||(42258902-42259019)
chr3 (317-418)||(44145116-44145217)
chr3 (311-427)||(12800089-12800205)
chr3 (330-434)||(44145403-44145506)
chr3 (311-418)||(4256242-4256349)
chr3 (311-434)||(22407430-22407553)
chr3 (355-434)||(25578714-25578792)
chr3 (311-426)||(26366731-26366846)
chr3 (311-426)||(29763685-29763799)
chr3 (356-427)||(34992868-34992939)
chr3 (355-434)||(35358486-35358565)
chr3 (359-430)||(40927026-40927097)
chr3 (359-434)||(47702461-47702536)
chr3 (355-429)||(26926904-26926978)
chr3 (388-434)||(29369793-29369839)
chr3 (311-408)||(16078852-16078949)
chr3 (317-434)||(21832686-21832803)
chr3 (359-428)||(39269498-39269567)
chr3 (366-435)||(42637791-42637860)
chr3 (370-434)||(5440569-5440633)
chr3 (359-427)||(34992576-34992644)
chr3 (311-434)||(21832188-21832311)
chr3 (355-434)||(40926695-40926774)
chr3 (311-418)||(54369047-54369154)
chr3 (364-434)||(26915108-26915178)
chr3 (375-429)||(42604905-42604959)
chr3 (310-396)||(44573966-44574052)
chr3 (310-434)||(21833516-21833640)
chr3 (319-418)||(24539161-24539261)
chr3 (359-435)||(39018827-39018903)
chr3 (311-434)||(51836290-51836411)
chr3 (319-418)||(3985781-3985880)
chr3 (311-418)||(21750483-21750590)
chr3 (311-418)||(34715444-34715551)
chr3 (369-432)||(42311207-42311270)
chr3 (311-386)||(44573679-44573754)
chr3 (317-412)||(46139246-46139341)
chr3 (317-418)||(13769286-13769387)
chr3 (337-418)||(27219337-27219418)
chr3 (355-412)||(37040016-37040073)
chr3 (330-418)||(14170007-14170095)
chr3 (330-418)||(44573334-44573422)
[»] chr2 (72 HSPs)
chr2 (249-435)||(3435412-3435599)
chr2 (249-435)||(12431889-12432076)
chr2 (249-434)||(33985901-33986087)
chr2 (259-434)||(29684003-29684179)
chr2 (317-434)||(17727396-17727513)
chr2 (310-435)||(20998977-20999102)
chr2 (330-434)||(883609-883713)
chr2 (247-427)||(29101749-29101931)
chr2 (337-434)||(884049-884146)
chr2 (309-434)||(32667175-32667300)
chr2 (310-434)||(16006969-16007093)
chr2 (323-434)||(27545117-27545228)
chr2 (311-434)||(34775349-34775472)
chr2 (249-429)||(883847-884028)
chr2 (310-434)||(33985759-33985881)
chr2 (311-434)||(12432097-12432220)
chr2 (311-434)||(25621274-25621397)
chr2 (311-434)||(31761124-31761247)
chr2 (332-434)||(19860029-19860131)
chr2 (311-412)||(6183355-6183456)
chr2 (330-435)||(39386661-39386766)
chr2 (318-434)||(32666969-32667085)
chr2 (355-434)||(6986449-6986528)
chr2 (368-435)||(12419829-12419896)
chr2 (311-434)||(40009966-40010089)
chr2 (356-434)||(29695373-29695451)
chr2 (330-435)||(7257616-7257721)
chr2 (311-434)||(8044534-8044658)
chr2 (311-418)||(3976460-3976567)
chr2 (364-435)||(19859916-19859987)
chr2 (337-434)||(29676286-29676383)
chr2 (310-418)||(18901852-18901960)
chr2 (340-434)||(10570927-10571021)
chr2 (355-429)||(26847276-26847349)
chr2 (364-429)||(4721846-4721911)
chr2 (317-393)||(10429772-10429848)
chr2 (318-398)||(10536925-10537005)
chr2 (330-434)||(10542071-10542175)
chr2 (370-434)||(22447297-22447361)
chr2 (317-405)||(33277548-33277636)
chr2 (311-418)||(42768323-42768428)
chr2 (311-418)||(3976992-3977099)
chr2 (310-361)||(15820100-15820151)
chr2 (311-418)||(23054334-23054441)
chr2 (311-418)||(43195792-43195899)
chr2 (332-418)||(7877852-7877938)
chr2 (317-395)||(10849486-10849564)
chr2 (312-434)||(29684211-29684333)
chr2 (285-434)||(39108080-39108230)
chr2 (375-436)||(14127240-14127301)
chr2 (342-435)||(18607273-18607366)
chr2 (311-396)||(21214190-21214275)
chr2 (369-434)||(21734408-21734473)
chr2 (342-398)||(10485222-10485278)
chr2 (249-340)||(29695471-29695563)
chr2 (311-383)||(39108398-39108470)
chr2 (319-418)||(25286257-25286356)
chr2 (323-434)||(28895519-28895629)
chr2 (340-411)||(32810894-32810965)
chr2 (307-418)||(43169250-43169361)
chr2 (388-434)||(10485170-10485216)
chr2 (356-426)||(17265009-17265079)
chr2 (311-369)||(37812272-37812330)
chr2 (320-426)||(38760315-38760421)
chr2 (311-369)||(39108277-39108335)
chr2 (317-418)||(11969060-11969161)
chr2 (310-362)||(5424770-5424822)
chr2 (355-407)||(6986376-6986428)
chr2 (274-384)||(7257088-7257200)
chr2 (310-434)||(13839247-13839371)
chr2 (330-418)||(21213893-21213981)
chr2 (304-348)||(22447178-22447222)
[»] chr1 (81 HSPs)
chr1 (249-434)||(29273151-29273337)
chr1 (249-434)||(39649010-39649196)
chr1 (259-426)||(43361693-43361861)
chr1 (311-434)||(1233918-1234041)
chr1 (311-429)||(41812647-41812765)
chr1 (249-412)||(15391833-15391997)
chr1 (249-435)||(21428192-21428380)
chr1 (311-434)||(52846838-52846961)
chr1 (311-437)||(5222683-5222809)
chr1 (312-434)||(15392017-15392139)
chr1 (311-434)||(21428047-21428170)
chr1 (311-426)||(43361541-43361656)
chr1 (317-434)||(22892683-22892800)
chr1 (311-434)||(24382349-24382472)
chr1 (311-434)||(48558310-48558433)
chr1 (285-434)||(38871117-38871267)
chr1 (310-434)||(2997044-2997168)
chr1 (311-435)||(13959393-13959517)
chr1 (355-434)||(29413340-29413419)
chr1 (355-434)||(52921500-52921579)
chr1 (317-434)||(21538929-21539046)
chr1 (317-426)||(33342273-33342382)
chr1 (311-435)||(11018845-11018969)
chr1 (355-427)||(22826778-22826850)
chr1 (350-434)||(39648906-39648989)
chr1 (311-418)||(2697320-2697427)
chr1 (311-434)||(9380892-9381015)
chr1 (311-418)||(17419795-17419902)
chr1 (249-367)||(29272992-29273111)
chr1 (259-348)||(5325069-5325159)
chr1 (290-434)||(2997228-2997373)
chr1 (311-418)||(4022114-4022221)
chr1 (376-435)||(45395543-45395602)
chr1 (364-434)||(24382193-24382263)
chr1 (340-434)||(49142674-49142767)
chr1 (330-434)||(25799112-25799217)
chr1 (330-418)||(38474291-38474379)
chr1 (311-434)||(38870938-38871062)
chr1 (311-418)||(8520082-8520189)
chr1 (356-435)||(11590411-11590490)
chr1 (311-406)||(15013545-15013640)
chr1 (339-434)||(20428991-20429086)
chr1 (375-434)||(29265910-29265969)
chr1 (317-412)||(40664224-40664319)
chr1 (317-412)||(43423293-43423388)
chr1 (311-393)||(21638255-21638337)
chr1 (356-434)||(24382602-24382680)
chr1 (370-432)||(29413136-29413198)
chr1 (317-398)||(24131876-24131957)
chr1 (389-434)||(39648827-39648872)
chr1 (249-373)||(46098530-46098655)
chr1 (375-432)||(49828665-49828722)
chr1 (355-435)||(11581746-11581826)
chr1 (330-418)||(20735763-20735851)
chr1 (330-434)||(28119750-28119854)
chr1 (370-434)||(42845069-42845133)
chr1 (370-434)||(45982174-45982238)
chr1 (355-434)||(47377827-47377909)
chr1 (311-426)||(9381099-9381214)
chr1 (356-427)||(15391747-15391818)
chr1 (311-418)||(31305719-31305826)
chr1 (375-434)||(36332303-36332362)
chr1 (355-434)||(47086310-47086389)
chr1 (340-434)||(49895345-49895437)
chr1 (311-397)||(12233312-12233398)
chr1 (396-434)||(22892495-22892533)
chr1 (317-411)||(27957804-27957898)
chr1 (375-434)||(36331907-36331962)
chr1 (389-434)||(12314570-12314615)
chr1 (381-434)||(18374517-18374570)
chr1 (311-396)||(20735552-20735637)
chr1 (317-390)||(22892428-22892501)
chr1 (311-396)||(33879767-33879852)
chr1 (311-396)||(33964403-33964488)
chr1 (370-422)||(10017376-10017428)
chr1 (249-348)||(12314449-12314549)
chr1 (317-412)||(13356911-13357007)
chr1 (330-418)||(19937051-19937139)
chr1 (370-434)||(20429283-20429347)
chr1 (317-397)||(35024242-35024322)
chr1 (330-418)||(45858663-45858751)
[»] scaffold0434 (2 HSPs)
scaffold0434 (249-434)||(13298-13484)
scaffold0434 (311-434)||(13505-13628)
[»] scaffold0029 (1 HSPs)
scaffold0029 (311-427)||(76851-76967)
[»] scaffold0989 (1 HSPs)
scaffold0989 (311-433)||(2936-3058)
[»] scaffold0054 (2 HSPs)
scaffold0054 (311-434)||(21252-21376)
scaffold0054 (317-371)||(11338-11392)
[»] scaffold1138 (1 HSPs)
scaffold1138 (311-427)||(1862-1978)
[»] scaffold0060 (2 HSPs)
scaffold0060 (311-434)||(13621-13744)
scaffold0060 (369-433)||(59518-59579)
[»] scaffold0419 (1 HSPs)
scaffold0419 (311-386)||(4228-4303)
[»] scaffold0339 (1 HSPs)
scaffold0339 (366-435)||(15696-15765)
[»] scaffold0166 (1 HSPs)
scaffold0166 (324-384)||(34507-34567)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 447 - 611
Target Start/End: Complemental strand, 36119567 - 36119403
Alignment:
Q  447 tcatgaaacgtgctataatgtggacagaattggaactatgaactcacctgtcaacattttctgctaggtaagtaaaataactgcaaaatgcagaaatatt 546  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36119567 tcatgaaacgtgctataatgtggacagaattggaactatgaactcacctgtcaacattttctgctaggtaagtataataactgcaaaatgcagaaatatt 36119468  T
Q  547 aatagaaatctaaatcattacttttaaaatgttgtgtacattgaacaaagcattctccatctctg 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36119467 aatagaaatctaaatcattacttttaaaatgttgtgtacattgaacaaagcattctccatctctg 36119403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 43599489 - 43599303
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  43599489 ctcttttggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 43599390  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  43599389 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 43599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 10989167 - 10989354
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || ||| |||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  10989167 ctctttgggcttgatgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 10989266  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||| |||||||    
T  10989267 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataa 10989354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 249 - 436
Target Start/End: Original strand, 15010955 - 15011143
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || ||||||||||||||  ||||||| | |||| ||||||| ||| ||| ||||| ||||| |||||||||  | |||||| |||||||||||    
T  15010955 ctctttgggcttggtgcgtgaatagatttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcttaactcatccttacaaaacc 15011054  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||| ||||||||    
T  15011055 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataaa 15011143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 244 - 435
Target Start/End: Complemental strand, 33435860 - 33435670
Alignment:
Q  244 tagcgctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttaca 342  Q
    |||| |||||| || ||||||||||||| |||  |||  | |||| ||||||| ||| | | ||||| ||||| |||||||||||| |||||| ||||||    
T  33435860 tagcactctttgggcttggtgcgtgaatcagt--aggtggcccttgaattcgacaagctatgataccatgttgaaatttggggtctaactcatccttaca 33435763  T
Q  343 aaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||||||| ||| ||| |||| |||||||||||| |||||||||| ||||||||| | |||||||||||||  |||||| ||||||||||||||    
T  33435762 aaaccgacttgtaagatgaggattgtctcctttatataaactcttatcaagagttttatctatccgatgtgagacttgagtttttcccaataa 33435670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 8559696 - 8559572
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  8559696 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 8559597  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || ||||||||||||||||||||||    
T  8559596 gtgggacttgggtttttcccaataa 8559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 33435999 - 33435875
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||  ||||| ||||||  |||||||||||  ||| |||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||    
T  33435999 ctgttgaaatttaaggtctaactcatctttacaaaaccggcttgtaaggtgaggattgtctcctttatataaactcttatcaagagtcttatctatccga 33435900  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  33435899 tgtgggacttgggtttttcccaata 33435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 20760649 - 20760773
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||||| |||| |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||||    
T  20760649 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccgat 20760748  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || ||||||||||||||||||||||    
T  20760749 gtgggacttgggtttttcccaataa 20760773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 12941658 - 12941560
Alignment:
Q  338 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |||||||||||| |||||| ||||| | |  ||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  12941658 ttacaaaaccgacttgcaaagtgagtagtacctcctttttataaactctcatcatgagtctcatctatctgatgtggtacttgggtttttcccaataaa 12941560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 322 - 432
Target Start/End: Complemental strand, 35561770 - 35561660
Alignment:
Q  322 ggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgg 421  Q
    ||||||| |||||| ||||||||||||   ||||||||||| |||| ||||| ||||||||||||  |||||| ||| ||||||||||||| ||||||||    
T  35561770 ggggtctaactcatccttacaaaaccggcatgcaaggtgaggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggacttgg 35561671  T
Q  422 gtttttcccaa 432  Q
    |||||||||||    
T  35561670 gtttttcccaa 35561660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 310 - 428
Target Start/End: Original strand, 36039782 - 36039900
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||||||||| |||||| ||||||||||||  |||  ||||||| | ||  |||| |||||||||||||||||||||||||||||||||||    
T  36039782 ctgttgaaatttggggtctaactcatccttacaaaaccggcttgtgaggtgagtagtgcatcctctttataaactctcatcaagagtctcatctatccga 36039881  T
Q  410 tgtaggacttgggtttttc 428  Q
    |||  || |||||||||||    
T  36039882 tgtgagatttgggtttttc 36039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 30176453 - 30176577
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||||||  |||  ||||||  | || ||||| ||||||||||||||||||||||||| ||||||||||    
T  30176453 tgttgaaattcggggcctaactcatccttacaaaaccggcttgtgaggtgaagagtgcctcctctttataaactctcatcaagagtctcgtctatccgat 30176552  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || ||||||| ||||||||||||||    
T  30176553 gtgggacttgagtttttcccaataa 30176577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 40902381 - 40902505
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || ||| || ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||    
T  40902381 ctgttgaaatttggggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccga 40902480  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| | |||||||||||||||||||    
T  40902481 tgtggaacttgggtttttcccaata 40902505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 36037299 - 36037185
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||||||||||| |||||| ||||||||||||  |||  ||||||| | ||  |||| |||||||||||||||||||||||||||||||||||||| |||    
T  36037299 aatttggggtctaactcatccttacaaaaccggcttgtgaggtgaggagtgcatcctctttataaactctcatcaagagtctcatctatccgatgtggga 36037200  T
Q  417 cttgggtttttcccaataa 435  Q
    |    ||||||||||||||    
T  36037199 c----gtttttcccaataa 36037185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 10989023 - 10989146
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||| | |||    
T  10989023 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctacctgat 10989122  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||| ||||||    
T  10989123 gtgggacttgggttttttccaata 10989146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 370 - 429
Target Start/End: Original strand, 30117484 - 30117543
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30117484 tcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcc 30117543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 43901050 - 43901129
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  43901050 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 43901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 330 - 436
Target Start/End: Complemental strand, 18313880 - 18313774
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| ||||||||||| | ||| |||||||| |||| ||||| | |||||||| | | ||||||||| ||||||||||||| |||||||| |||||||    
T  18313880 actcatccttacaaaacctacttgaaaggtgaggattgcctcctctatataaacttttaacaagagtcttatctatccgatgtgggacttggatttttcc 18313781  T
Q  430 caataaa 436  Q
    |||||||    
T  18313780 caataaa 18313774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 22451463 - 22451336
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaa----gagtctcatctatc 406  Q
    ||||| |||||||||  | |||||| ||||||||||||  |||  ||||||||| |||||||| |||||||| |||||||||    ||||||| ||||||    
T  22451463 tgttgaaatttggggcataactcatccttacaaaaccggcttgtgaggtgagaagtgtctcctctttataaattctcatcaatcaagagtctcgtctatc 22451364  T
Q  407 cgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||||  |||||||||||||    
T  22451363 cgatgtaggacttaagtttttcccaata 22451336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 16454624 - 16454749
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  | |||||||| |||||||||||    
T  16454624 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttcttaagagtcttatctatccgat 16454723  T
Q  411 gtaggacttgggtttttcccaataaa 436  Q
    ||  ||||||| ||||| ||||||||    
T  16454724 gtgagacttggtttttttccaataaa 16454749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 320 - 433
Target Start/End: Complemental strand, 42228877 - 42228764
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    ||||||||| |||||| ||||||||| ||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||    
T  42228877 ttggggtctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactt 42228778  T
Q  420 gggtttttcccaat 433  Q
     | |||||||||||    
T  42228777 agatttttcccaat 42228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 15010810 - 15010934
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||| |||||||  ||| |||||||| |||| ||||| |||||||| |||  ||||||||||  ||||||||||    
T  15010810 tgttgaaatttggggcctaactcatccttataaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgat 15010909  T
Q  411 gtaggactt-gggtttttcccaata 434  Q
    || |||||| |||||||||||||||    
T  15010910 gtgggacttggggtttttcccaata 15010934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 5720900 - 5720979
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  5720900 aaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 5720979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 398
Target Start/End: Complemental strand, 35561637 - 35561486
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtc-tgactcattcttacaaaac 346  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| | | |||||| ||||||||||    
T  35561637 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttgggggcctaactcatccttacaaaac 35561538  T
Q  347 cgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 398  Q
    ||  || ||||||||| |||  ||||| ||||||||||||  ||||||||||    
T  35561537 cggcttacaaggtgaggattacctcctctttataaactcttctcaagagtct 35561486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 330 - 419
Target Start/End: Original strand, 26122752 - 26122841
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    |||||| |||| |||||| | ||| || ||||| ||||  |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  26122752 actcatccttataaaaccaacttgtaatgtgaggattgcatcctctttataaactctcatcaagagtctcatctatccgatgtgggactt 26122841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 311 - 413
Target Start/End: Original strand, 3183900 - 3184002
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || ||||||  |||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||  |||||||||||    
T  3183900 tgttgaaatttggggcctaactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcctatctatccgat 3183999  T
Q  411 gta 413  Q
    |||    
T  3184000 gta 3184002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 34248186 - 34248085
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| ||||||| |||    
T  34248186 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtggga 34248087  T
Q  417 ct 418  Q
    ||    
T  34248086 ct 34248085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 435
Target Start/End: Original strand, 15968097 - 15968179
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt--aggacttgggtttttcccaataa 435  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| ||| ||| |||||   |||| |||||||||||||||||    
T  15968097 aaggtgaggattgtctcctttatataaactcttatcaagagtcttatcaatctgatgtgggggacatgggtttttcccaataa 15968179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 18905971 - 18905864
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  18905971 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 18905872  T
Q  411 gtaggact 418  Q
    || |||||    
T  18905871 gtgggact 18905864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 45122381 - 45122303
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||| | |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  45122381 aaggtgaggattgtctc-tctttatatactcttctcaagagtcttatctatcagatgtgggacttgggtttttcccaata 45122303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 4195965 - 4196063
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt-gggtttttcccaata 434  Q
    ||||||||||||  ||| |||||||| |||| ||||| || |||||||||  ||||||||||  |||||||||||| || ||| |||||||||||||||    
T  4195965 cttacaaaaccggcttgtaaggtgaggattgcctcctcttgataaactcttctcaagagtcttgtctatccgatgtgggccttggggtttttcccaata 4196063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 25186834 - 25186764
Alignment:
Q  364 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| | |||||||| | ||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  25186834 attgtctcctctatataaacttttatcaagagtcttatctatccgatgtgggacttaggttttttccaata 25186764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 8559745 - 8559790
Alignment:
Q  389 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  8559745 tcaagagtcttatctatccgatgtgggacttgggtttttcccaata 8559790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 34248468 - 34248367
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| || |||| |||    
T  34248468 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtggga 34248369  T
Q  417 ct 418  Q
    ||    
T  34248368 ct 34248367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 396
Target Start/End: Complemental strand, 36997281 - 36997196
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 396  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| |||||||||    
T  36997281 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagt 36997196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 426
Target Start/End: Complemental strand, 3895202 - 3895131
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 426  Q
    |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||| |||||| || |||||    
T  3895202 aaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatataggacatgagtttt 3895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 8559852 - 8559910
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  8559852 tttatatactcttctcaagagtct-atctatccgatgtgggacttgggtttttcccaata 8559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 15968461 - 15968540
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||  ||||||||| |  ||||||||| ||||||||||| |||||| |||||| |||| ||| ||||||||||||    
T  15968461 aaggtgagggttgtctcctctaaataaactcttatcaagagtctaatctatacgatgtgggacatggatttttcccaata 15968540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 32931516 - 32931409
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| |   |||||||||||    
T  32931516 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatgatatctatccgat 32931417  T
Q  411 gtaggact 418  Q
    || |||||    
T  32931416 gtgggact 32931409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 428
Target Start/End: Original strand, 8056273 - 8056343
Alignment:
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 428  Q
    ||||| |||| ||||| | |||||||||| ||||||||||| |||| |||||||| |||| ||||||||||    
T  8056273 gtgaggattgcctcctctatataaactcttatcaagagtcttatctttccgatgtgggacatgggtttttc 8056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 5496618 - 5496553
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| |||||||||| |||||||||||||| |||||  ||||| ||||||| |||||| ||||||    
T  5496618 ctcctctttataaactttcatcaagagtctcgtctatttgatgtgggacttgagttttttccaata 5496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 15857089 - 15856964
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccg-atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    ||||| ||||||||  || |||||| |||| ||||||| ||||| |||||||  |||| ||| | ||||||||||||  || ||||||| |||||| |||    
T  15857089 tgttgaaatttgggacctaactcatccttagaaaaccggatttgtaaggtgatgattgcctcatctttataaactcttctcgagagtcttatctattcga 15856990  T
Q  410 tgtaggacttgggtttttcccaataa 435  Q
     || | |||| |||||||||||||||    
T  15856989 cgttgaacttaggtttttcccaataa 15856964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 15857216 - 15857171
Alignment:
Q  389 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  15857216 tcaagagtcttatctatccgatgtgggacttgagtttttcccaata 15857171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 433
Target Start/End: Original strand, 8056482 - 8056598
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||| |||| || |||||||||||||||| || ||   ||  |||| |||||||||| | ||||||| || ||||||||||| ||||||| ||||| |||    
T  8056482 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttatcaagagtcttatctatctgatgtggga 8056581  T
Q  417 cttgggtttttcccaat 433  Q
    | || |||||| |||||    
T  8056582 catgtgttttttccaat 8056598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 43599550 - 43599510
Alignment:
Q  394 agtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  43599550 agtcttatctatccgatgtgggacttgggtttttcccaata 43599510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 3895450 - 3895372
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||| || || | |||||| ||| ||||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  3895450 aaggtgaggattgccttctctatataaattcttatcaagagtcttatctatccgatgta-gacatgggttttttccaata 3895372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 21085137 - 21085244
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || ||||||  ||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  21085137 tgttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 21085236  T
Q  411 gtaggact 418  Q
    || |||||    
T  21085237 gtgggact 21085244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 21653442 - 21653335
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||| | || |||||| ||||||||||||  ||| |||||||||| || ||||| | ||||||||||  |||||||    |||||||||||    
T  21653442 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaagagcactatctatccgat 21653343  T
Q  411 gtaggact 418  Q
    || |||||    
T  21653342 gtgggact 21653335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 21653919 - 21653812
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| | |||||||| |  |||||||    |||||||||||    
T  21653919 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttttctcaagagcactatctatccgat 21653820  T
Q  411 gtaggact 418  Q
    || |||||    
T  21653819 gtgggact 21653812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 22277639 - 22277564
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 386  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||    
T  22277639 tgttgaaatttggggattaactcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaactct 22277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 37537123 - 37537206
Alignment:
Q  350 tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 433  Q
    |||| |||||| | |||||||||| |||| | |||||  |||| ||||| |||||| |||||| ||||||| ||||||||||||    
T  37537123 tttgtaaggtggggattgtctcctctttacatactcttctcaaaagtcttatctattcgatgtgggacttgagtttttcccaat 37537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 43984305 - 43984412
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| | |||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  43984305 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgat 43984404  T
Q  411 gtaggact 418  Q
    || |||||    
T  43984405 gtgggact 43984412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 30066029 - 30065983
Alignment:
Q  388 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||| ||||||| ||||| ||||||| |||||||||||||    
T  30066029 atcaagagtcttatctatctgatgtgggacttgagtttttcccaata 30065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 23027823 - 23027924
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || ||||||||||| |||||||  ||| |||||||| | || ||||| ||||||| ||||  ||||||||   |||||||| |||| |||    
T  23027823 aatttggggcctaactcattcttaaaaaaccggcttgtaaggtgaggagtgcctcctctttataagctcttctcaagagttctatctatcctatgtggga 23027922  T
Q  417 ct 418  Q
    ||    
T  23027923 ct 23027924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 434
Target Start/End: Complemental strand, 39125020 - 39124916
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    ||||||||||||||||| |  ||| ||| |||| | || ||||| |||||||||||| ||  ||||||   | ||||| |||| |||| |||||||||||    
T  39125020 actcattcttacaaaactggcttgtaagatgaggagtgcctcctctttataaactcttattgagagtcctgtttatccaatgtgggacctgggtttttcc 39124921  T
Q  430 caata 434  Q
    |||||    
T  39124920 caata 39124916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 249 - 436
Target Start/End: Complemental strand, 9378971 - 9378783
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| |||||||||||||||||| |||||| |||||||||||    
T  9378971 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggtctaactcatccttacaaaacc 9378872  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |  ||| ||||  || |||| ||||| ||||||||||||  |||||||||| |||||| |||||| |||||||||||||||||||||||    
T  9378871 ggcttgtaaggcaaggattgcctcctctttataaactcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaataaa 9378783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 13310351 - 13310538
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || ||||||||| || | |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  13310351 ctctttgggcttggtgcgtaaacaggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 13310450  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    | ||||  | ||||| | |||||||| ||||||||||||| |||||||||||||||||| || || ||||||||||||||| ||||||    
T  13310451 ggtttgtgaagtgaggagtgtctcctctttataaactctcgtcaagagtctcatctatctgacgtgggacttgggtttttctcaataa 13310538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 23396787 - 23396601
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  23396787 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 23396688  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||| | |||||| |||||  |||||||||| ||||||||| ||| |||||||| ||||||||||||    
T  23396687 ggcttgtaaggtgaggattgcctcatctttatatactcttctcaagagtcttatctatccgttgtgggacttggatttttcccaata 23396601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 40703785 - 40703972
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| |||   | ||||| | ||| |||||||||  | |||||| |||||||| ||    
T  40703785 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagcgttgataccatattgaaatttggggcataactcatccttacaaatcc 40703884  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    || |||  ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||    
T  40703885 gacttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgagcttttccaaataa 40703972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 6783154 - 6783030
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||    
T  6783154 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccga 6783055  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    |||  ||||||||||||||||||||    
T  6783054 tgtgagacttgggtttttcccaata 6783030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 33855806 - 33855683
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  33855806 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 33855707  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  33855706 gtgggacttgggtttttcccaata 33855683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 31374907 - 31374763
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||||||| | ||||| |||| ||||||| |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||    
T  31374907 ccttgaattcgacaagctctaatatcatgttgaaattcggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaac 31374808  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttc 428  Q
    |||  |||| ||||| |||||||||||||||||||||| ||||||    
T  31374807 tcttctcaatagtcttatctatccgatgtaggacttggatttttc 31374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 9379089 - 9378992
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||| |||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| | |||||||||||||||||||    
T  9379089 cttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaata 9378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 23821665 - 23821788
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| ||||| ||||||| ||||| |||||||||| ||||||| ||||| || ||||||||    
T  23821665 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggtaagaattgcctcctctttataaactgtcatcaaaagtcttatttatccgat 23821764  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    ||   |||||||||||||||||||    
T  23821765 gtgaaacttgggtttttcccaata 23821788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 35866636 - 35866751
Alignment:
Q  319 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||||| || |||||| ||||||||||||  ||| ||| |||| |||| | ||| | |||||||||| ||||||||||| ||||||||||||| |||||    
T  35866636 tttggggcctaactcatccttacaaaaccggcttgtaagttgagtattgccccctctatataaactcttatcaagagtcttatctatccgatgtgggact 35866735  T
Q  419 tgggtttttcccaata 434  Q
    ||||||||||||||||    
T  35866736 tgggtttttcccaata 35866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 16565036 - 16564886
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||||||| ||| ||||| ||||| |||||  || || |||||| |||| ||||||| ||   |||||||| | || ||||| |||||||||    
T  16565036 ccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaac 16564937  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||| || |||||||| ||||||||||||| |||||||||||||||||||||    
T  16564936 tcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16564886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 434
Target Start/End: Original strand, 16600626 - 16600776
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||||||| ||| ||||| ||||| |||||  || || |||||| |||| ||||||| ||   |||||||| | || ||||| |||||||||    
T  16600626 ccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaac 16600725  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||| || |||||||| ||||||||||||| |||||||||||||||||||||    
T  16600726 tcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 436
Target Start/End: Original strand, 39808593 - 39808711
Alignment:
Q  318 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 417  Q
    |||||||| || |||||| || ||||||| |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||    
T  39808593 atttggggcctaactcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggac 39808692  T
Q  418 ttgggtttttcccaataaa 436  Q
    |||||||||||||||||||    
T  39808693 ttgggtttttcccaataaa 39808711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 6813067 - 6813188
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| || |||||||||  |||  || |||| | || ||||| ||||||||||||||||||||||| ||||||||||||    
T  6813067 tgttgaaatttggggcctaactcatcctcacaaaaccggcttgtgagttgaggagtgcctcctctttataaactctcatcaagagtcccatctatccgat 6813166  T
Q  411 gtaggacttgggtttttcccaa 432  Q
    || ||||||| |||||||||||    
T  6813167 gtgggacttgtgtttttcccaa 6813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 340 - 436
Target Start/End: Complemental strand, 6782912 - 6782816
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  6782912 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaataaa 6782816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 435
Target Start/End: Original strand, 6751743 - 6751822
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||||||| | || ||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  6751743 aggtgaggagtgcctcctctttgtaaactctcatcaagaatctcatctatccgatgtgggacttgggtttttcccaataa 6751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 16565169 - 16565090
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16565169 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 16600493 - 16600572
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  16600493 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 31357708 - 31357787
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  31357708 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 31357787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 6751539 - 6751617
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||| | || ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  6751539 aggtgaggagtgcctcctctttgtaaactctcatcaagagtctcatctatccgatttgggacttgggtttttcccaata 6751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 29252662 - 29252568
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||| || |||||||||||||||||||||    
T  29252662 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgacgtgggacttgggtttttcccaata 29252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 309 - 418
Target Start/End: Original strand, 1661178 - 1661287
Alignment:
Q  309 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 408  Q
    ||||||| ||||||||| || |||||||||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||| | |||||||||    
T  1661178 cctgttgaaatttggggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatctatccg 1661277  T
Q  409 atgtaggact 418  Q
    |||| |||||    
T  1661278 atgtgggact 1661287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 40703647 - 40703764
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||| |||| || |||||| ||||||||||||  |||  ||||||| | |||||||| |||||||| |||||||||||||||||| ||| |||||| |||    
T  40703647 aattaggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgtctcctctttataaagtctcatcaagagtctcatttattcgatgtggga 40703746  T
Q  417 cttgggtttttcccaata 434  Q
    ||||| |||||| |||||    
T  40703747 cttggttttttctcaata 40703764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 33834021 - 33833941
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  33834021 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttttccaataa 33833941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 259 - 434
Target Start/End: Original strand, 38948350 - 38948525
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    |||||| ||||||| |||||||||| |||| ||||||| ||| ||| ||||| |  || |||| | ||||| |||||| |||| |||| | |||  ||||    
T  38948350 ttggtgtgtgaataggtttaggcagcccttgaattcgacaagctctgataccataatgaaattggaggtctaactcatcctta-aaaatcaattcacaag 38948448  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||||||| | |||||||||| || |||||||| |||| |||||||| |||| ||  ||||||||||||    
T  38948449 gtgagaattgtctcctctatataaactcttataaagagtcttatctttccgatgtgggacatgattttttcccaata 38948525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 6813211 - 6813395
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||  | || ||||||||    
T  6813211 ctctttgggcttggtgcgtgaatatgt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaacttgtcctcacaaaacc 6813308  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  |||  ||||||| | || ||||| ||||||||||||||||||||||| |||||||| ||||  ||||||||| |||||||||||    
T  6813309 ggcttgtgaggtgaggagtgcctcctctttataaactctcatcaagagtcccatctatctgatgcgggacttggggttttcccaata 6813395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 22841123 - 22841044
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| | |||||||||| | ||||||||| |||||||||||||||| | ||||||||||||||||    
T  22841123 aaggtgaggattgtctcctctatataaactcttaccaagagtcttatctatccgatgtagggcatgggtttttcccaata 22841044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 369 - 435
Target Start/End: Complemental strand, 5775939 - 5775873
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||    
T  5775939 ctcctctttataaactctcattaagagtctcatctatgcgatgtgggacttgagtttttcccaataa 5775873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 2179743 - 2179646
Alignment:
Q  338 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca-tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||| | |||| |||||||| |||||||||| ||||||||||||   |||||||||| ||||||||||||| |||||||  ||||||||||||    
T  2179743 ttacaaaactggtttgtaaggtgaggattgtctcctctttataaactctttctcaagagtcttatctatccgatgtgggacttgaatttttcccaata 2179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 48114053 - 48113989
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  48114053 tcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggttattcccaata 48113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 258571 - 258423
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || ||||||  | ||||||||   |||  | ||||| | || ||||| || || |||    
T  258571 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatcatcacaaaaccagcttgtgaagtgaggagtgcctcctcttcatcaac 258472  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  258471 tctcatcaagagtctcatctatccgatg--ggacttgggtttttcccaata 258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 4258033 - 4258112
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| | || ||||| || ||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||    
T  4258033 aaggtgaggagtgcctcctattgataaactcttatcaagagtcttatctatccgatgtgagacttgggtttttcccaata 4258112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 285 - 427
Target Start/End: Complemental strand, 8682026 - 8681883
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| || || |||||||||||||||||||| ||  | | |||  |||| ||| | |||||||||    
T  8682026 ccttgaattcgacaagctctgataccatgttgaaatttgaggcctaactcattcttacaaaaccgacttatatgttgaagattgcctcttctttataaac 8681927  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    ||| ||||||||||| ||||||| ||||| |||||||| |||||    
T  8681926 tcttatcaagagtcttatctatctgatgtgggacttggattttt 8681883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 33834226 - 33834147
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||| ||||| |||| ||| ||||||||||||    
T  33834226 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggatttttcccaata 33834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 277 - 430
Target Start/End: Complemental strand, 43566113 - 43565960
Alignment:
Q  277 taggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctccttt 375  Q
    ||||||| | || ||||||| ||| ||||||||| ||||| |||||||||||| || ||||||||||||| ||  ||  |||||||| | |||| |||||    
T  43566113 taggcagcctttgaattcgacaagctctaataccatgttgaaatttggggtctaacccattcttacaaaatcggcttataaggtgaggagtgtcaccttt 43566014  T
Q  376 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 430  Q
    | ||||||||||||||| |||||  | |||||||| | | ||||| |||||||||    
T  43566013 t-ataaactctcatcaaaagtcttgtttatccgatatggtacttgagtttttccc 43565960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 23390639 - 23390582
Alignment:
Q  377 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  23390639 tataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 23390582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 434
Target Start/End: Complemental strand, 33855541 - 33855473
Alignment:
Q  366 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| | |||| |||||| ||||||||||| | |||||||||||||||||||||    
T  33855541 tgtctcctctttataaactattatcacgagtcttatctatccgatatgggacttgggtttttcccaata 33855473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 429
Target Start/End: Complemental strand, 36621130 - 36621019
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||||||| |||  ||||| |||||||||||| ||||  || |||| | ||  |||| |||||||| ||||||||||||||||||| |||||||||| ||    
T  36621130 aatttgggatctatctcatccttacaaaaccggtttgtgagatgaggagtgcatcctctttataaaatctcatcaagagtctcatc-atccgatgtaaga 36621032  T
Q  417 cttgggtttttcc 429  Q
    |||| ||||||||    
T  36621031 cttgagtttttcc 36621019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 434
Target Start/End: Complemental strand, 43366467 - 43366399
Alignment:
Q  366 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| ||||||||||||||||||||||||| || || |||||| ||| |||| ||||||||||||    
T  43366467 tgtctcctctttataaactctcatcaagagtctcgtcaattcgatgtgggatttggatttttcccaata 43366399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 434
Target Start/End: Original strand, 4258261 - 4258316
Alignment:
Q  379 taaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  4258261 taaactcttatcaagagtcttatctatccgatgtgggacttgagtttttcccaata 4258316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 10903314 - 10903389
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  10903314 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 10903389  T

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Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 10903521 - 10903596
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  10903521 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 10903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 23396929 - 23396814
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| ||| |||  |||| ||||| |||||| ||||| ||||||||||| ||||||  | |    
T  23396929 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaagttgatgattgcctcctctttatatactcttatcaagagtcttatctatatgtt 23396830  T
Q  411 gtaggacttgggtttt 426  Q
    || |||||||| ||||    
T  23396829 gtgggacttggatttt 23396814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 5266461 - 5266351
Alignment:
Q  324 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggt 423  Q
    ||||| |||||| |||||||||||| ||   ||| |||| ||||  |||| | ||||| |||| ||||||||||| ||||||| ||||| |||| |||||    
T  5266461 ggtctaactcatccttacaaaaccggttcataagttgaggattggatcctctatataatctcttatcaagagtcttatctatctgatgtgggacatgggt 5266362  T
Q  424 ttttcccaata 434  Q
    |||||||||||    
T  5266361 ttttcccaata 5266351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 47856038 - 47856095
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 426  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||| ||| |||||||||    
T  47856038 ctcctctttataaactcttatcaagagtcttatctatccgatgtgggatttgggtttt 47856095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 1663593 - 1663701
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 409  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||||  ||||||||   ||||||||||    
T  1663593 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttttataaactcttctcaagagtgctatctatccga 1663692  T
Q  410 tgtaggact 418  Q
    ||| |||||    
T  1663693 tgtgggact 1663701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 2232211 - 2232087
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||| |||| | |||||  ||||||||| ||  |||  ||||||| |||| ||||| | |||||||||| ||||||||| | |||||||||||    
T  2232211 tgttgaaatttagggtataactcaaccttacaaaatcggcttgtgaggtgaggattgcctcctctatataaactcttatcaagagttttatctatccgat 2232112  T
Q  411 gtaggacttg-ggtttttcccaata 434  Q
    | |||||||| ||||||| ||||||    
T  2232111 gcaggacttgaggttttttccaata 2232087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 29780256 - 29780176
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 397  Q
    ||||||||| || |||||| |||| |||||||| ||| |||||||| | |||||||| ||||||||||||  |||||||||    
T  29780256 aatttggggcctaactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtc 29780176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 435
Target Start/End: Complemental strand, 36237897 - 36237793
Alignment:
Q  331 ctcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 430  Q
    ||||| ||||||||||||  ||| |||| ||| | || ||||| |||||||||||| ||||||||||  || ||||| |||| |||||||||| |||||     
T  36237897 ctcatccttacaaaaccggcttgtaaggagaggagtgcctcctctttataaactcttatcaagagtcctatgtatccaatgtgggacttgggtgtttccg 36237798  T
Q  431 aataa 435  Q
    |||||    
T  36237797 aataa 36237793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 418
Target Start/End: Original strand, 37272053 - 37272141
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  ||||| ||||||| |||||    
T  37272053 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggact 37272141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 7135238 - 7135333
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    ||||||||| || ||||||  |||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||||    
T  7135238 aatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgt 7135333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 434
Target Start/End: Original strand, 23821540 - 23821583
Alignment:
Q  391 aagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  23821540 aagagtctcatctatcctatgtgggacttgggtttttcccaata 23821583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 6214302 - 6214356
Alignment:
Q  389 tcaagagtctcatctatccgatgtaggacttgggtttttcccaataaagaatcct 443  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||  |||||||    
T  6214302 tcaagagtcttgtctatccgatgtgggacttgggtttttcccaatatcgaatcct 6214356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 412
Target Start/End: Complemental strand, 29645886 - 29645829
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |||||||| |||| ||||||| |||||||||  ||||||||||| |||||||||||||    
T  29645886 aaggtgaggattgcctcctttatataaactcatatcaagagtcttatctatccgatgt 29645829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 39808460 - 39808553
Alignment:
Q  318 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||||||| || |||||| || |||||||||  ||  |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||    
T  39808460 atttggggcctaactcatcctcacaaaaccggcttttaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatg 39808553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 43384279 - 43384376
Alignment:
Q  321 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  43384279 tggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 43384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 435
Target Start/End: Complemental strand, 21557067 - 21557007
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||||||||||| |||||||||   ||||||||||||| ||||||| |||||| |||||||    
T  21557067 tttataaactcttatcaagagttctatctatccgatgtgggacttgagttttttccaataa 21557007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 27585352 - 27585264
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| | |||||| | || ||||||||||||||||||  |||||| ||  ||||||||||||| |||||    
T  27585352 actcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccgatgtgggact 27585264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 386
Target Start/End: Complemental strand, 28910148 - 28910072
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 386  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  28910148 ctgttgaaatttgggggctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 28910072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 40137704 - 40137808
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| ||||||||||||  | | |||||||| | |||||| | |||||||||||| || |||||||   ||||||| |||| || |||||||||| ||    
T  40137704 actcatccttacaaaaccggctcgtaaggtgaggagtgtctcttctttataaactcttattaagagtcctgtctatccaatgtggggcttgggttttgcc 40137803  T
Q  430 caata 434  Q
    |||||    
T  40137804 caata 40137808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 12578449 - 12578556
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||| ||| ||| |||| ||| | || ||||| ||| |||||||| ||||||  ||  ||||| |||||    
T  12578449 tgttgaaatttggggtctaactcatccttacaaaatcgaattgtaaggcgaggagtgcctcctctttctaaactctgatcaagcttcctatctaaccgat 12578548  T
Q  411 gtaggact 418  Q
    || |||||    
T  12578549 gtgggact 12578556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 427
Target Start/End: Complemental strand, 24426858 - 24426752
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    ||||||||| ||||| ||||| ||||| | |||  |||||||| | | ||| || |||||||||||| ||||||||| | |||||||||| || ||||||    
T  24426858 ttggggtctaactcactcttataaaactggtttataaggtgaggaatatcttctctttataaactcttatcaagagt-ttatctatccgacgtgggactt 24426760  T
Q  420 gggttttt 427  Q
     |||||||    
T  24426759 tggttttt 24426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 29646135 - 29646056
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||| ||||| | |||||||||  ||||||||||| |||||||| |||| |||| ||  ||||||||||||    
T  29646135 aaggtgaggattgcctcctctatataaactcctatcaagagtcttatctatccaatgtgggacatgaatttttcccaata 29646056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 43288373 - 43288278
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    ||||||||| || |||||  ||||||||||||  ||| ||| |||| | || ||||| |||||||||||| ||||||||||  ||||| |||||||    
T  43288373 aatttggggcctaactcacccttacaaaaccggattgtaagatgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgt 43288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 43288641 - 43288546
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    ||||||||| || ||| || ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||| ||| | |||||||    
T  43288641 aatttggggcctaactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagagtcttatcaaaccgatgt 43288546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 30768488 - 30768410
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||| || ||||||| | |||||| | | ||||||||||| ||||||||||||| |||| || |||||||| ||||    
T  30768488 aggtgaggatcgtctcctctatataaattattatcaagagtcttatctatccgatgtgggacatgagtttttcctaata 30768410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 34748880 - 34748786
Alignment:
Q  324 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||| |||||| ||||||||||||  ||| | |||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  34748880 ggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 34748786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 257262 - 257363
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  | | |||||||| | || ||||| ||||||||||||  |||||| |   ||||||||||||| |||    
T  257262 aatttggggcctaactcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatctatccgatgtggga 257361  T
Q  417 ct 418  Q
    ||    
T  257362 ct 257363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 417
Target Start/End: Complemental strand, 14691162 - 14691081
Alignment:
Q  336 tcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 417  Q
    ||||||||||| |  ||| |||||||| | |||||||| |||||||||||| |||||| |||  ||||| ||||||| ||||    
T  14691162 tcttacaaaactggcttgtaaggtgaggagtgtctcctctttataaactcttatcaagcgtcctatctaaccgatgtgggac 14691081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 40703406 - 40703479
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 390  Q
    ||||||||| || |||||| ||||||||||||  |||  ||||||| | || ||||| ||||||||||||||||    
T  40703406 aatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgcctcctctttataaactctcatc 40703479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 12518165 - 12518241
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    ||||||||| || |||||| ||||||||||||| ||| |||| ||| | || | ||| |||||||||||| ||||||    
T  12518165 aatttggggcctaactcatccttacaaaaccgaattgtaaggcgaggagtgccccctctttataaactctgatcaag 12518241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 34590644 - 34590556
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 398  Q
    |||||| |||||||||  | |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||||| || ||||||||    
T  34590644 ctgttgaaatttggggcttaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatgaagagtct 34590556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 418
Target Start/End: Original strand, 36092599 - 36092695
Alignment:
Q  322 ggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||||| |||||| |||||||||||   ||| |||||||| | || ||||| | ||||||||||  |||||| ||  ||||||||||||| |||||    
T  36092599 ggggtctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatctatccgatgtgggact 36092695  T

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Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 410
Target Start/End: Original strand, 43167881 - 43167981
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||||||  | |||||| ||||||||||||  |   |||||||| |||| ||||| ||||||||||||  ||||||||   ||||||||||    
T  43167881 ctgttgaaatttggggcttaactcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagtgctatctatccga 43167980  T
Q  410 t 410  Q
    |    
T  43167981 t 43167981  T

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Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 418
Target Start/End: Original strand, 43383954 - 43384042
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| |||||||||||| |||| |||| ||| | || ||||| ||||||||||||   ||||| ||  ||||||||||||| |||||    
T  43383954 actcatccttacaaaaccggtttgtaaggggagtagtgcctcctctttataaactctttgcaagactcctatctatccgatgtgggact 43384042  T

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Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 48116291 - 48116367
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    ||||||| | || |||||| ||||||||||||  ||| |||||||| | ||| |||| |||||||||||| ||||||    
T  48116291 aatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtgtcctctttataaactctgatcaag 48116367  T

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Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 49040624 - 49040580
Alignment:
Q  368 tctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |||||| | |||||||||| ||||||||||| |||||||||||||    
T  49040624 tctcctctatataaactcttatcaagagtcttatctatccgatgt 49040580  T

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Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 259 - 438
Target Start/End: Original strand, 18914304 - 18914484
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    ||||||||||||||||||||||| | |||| ||||||| ||| ||  ||||| ||||| ||||||||| || ||||||||||||||||||   ||| |||    
T  18914304 ttggtgcgtgaataagtttaggcggcccttgaattcgacaagctccgataccatgttgaaatttggggcctaactcattcttacaaaaccagcttgtaag 18914403  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaaga 438  Q
    ||||| ||||||||||||||||||||| |  ||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  18914404 gtgaggattgtctcctttttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaataaaga 18914484  T

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Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 249 - 435
Target Start/End: Complemental strand, 13413761 - 13413575
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  13413761 ctctttgggcttggtgcgtgaataggtttaggcagtccttgaattcga-aagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 13413663  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||  ||||| ||||||||||||||||||||||    
T  13413662 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatttgatgtgggacttgggtttttcccaataa 13413575  T

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Target: chr5; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 38376909 - 38376723
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || || |||| |||||| |||||||| | |||| | ||||| ||| ||| ||||| ||||||||||||||| || |||||| |||||||||||    
T  38376909 ctctttgggcttagtgcatgaataggtttaggcggcccttgacttcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaacc 38376810  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  38376809 ggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 38376723  T

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Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 20720476 - 20720663
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || ||||||||||||||||||||||| | |||| ||||||||||| ||| ||||| ||||  |||||||||||| |||||| |||||||||||    
T  20720476 ctctttgggcttggtgcgtgaataagtttaggcggcccttgaattcgataagctctgataccatgttaaaatttggggtctaactcatccttacaaaacc 20720575  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |  ||| || ||||| | || |||||||||| ||||||| ||||||| ||| ||||||| ||||| ||||||| ||||||||||||||    
T  20720576 ggcttgtaaagtgaggagtgcctcctttttacaaactcttatcaagaatcttatctatctgatgtgggacttgagtttttcccaataa 20720663  T

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Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 259 - 428
Target Start/End: Original strand, 40168977 - 40169147
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  40168977 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 40169076  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 428  Q
    |||||||||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||    
T  40169077 gtgagaattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttc 40169147  T

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Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 43490389 - 43490575
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||| | ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  43490389 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcaacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 43490488  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| ||||||| || ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  43490489 ggcttggaaggtgagtattgtcttctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 43490575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 249 - 432
Target Start/End: Original strand, 3015549 - 3015731
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||| ||| || |||||  |||||||||||    
T  3015549 ctctttgggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttagggcctaactcaaccttacaaaacc 3015646  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 432  Q
    |  ||||||||||||  ||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3015647 ggcttgcaaggtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaa 3015731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 18914149 - 18914273
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||||||||||||||| | ||| |||||||| ||||||||||||||||||||| |  ||||||||||   ||||||||    
T  18914149 ctgttgaaatttggggcctaactcattcttacaaaaccaacttgtaaggtgaggattgtctcctttttataaacttttctcaagagtcttgactatccga 18914248  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  18914249 tgtgggacttgggtttttcccaata 18914273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 249 - 427
Target Start/End: Complemental strand, 34457274 - 34457095
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  34457274 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 34457175  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    |  ||| |||||||| ||||  |||| ||||||||||||  ||||||||||  |||||||||| | ||||||||||||||    
T  34457174 ggcttgtaaggtgaggattgcatcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggttttt 34457095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 28358030 - 28358147
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| |||||||||| ||||||||||||  ||||||||||  |||||||||||| |||    
T  28358030 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtggga 28358129  T
Q  417 cttgggtttttcccaata 434  Q
    ||||||||||||||||||    
T  28358130 cttgggtttttcccaata 28358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 310 - 426
Target Start/End: Original strand, 35526976 - 35527092
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||    
T  35526976 ctgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccga 35527075  T
Q  410 tgtaggacttgggtttt 426  Q
    ||| |||||||||||||    
T  35527076 tgtgggacttgggtttt 35527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 3015406 - 3015529
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||  ||||||||||||  |||||| |||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  3015406 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaatgtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgat 3015505  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || || ||||||||||||||||||    
T  3015506 gtggggcttgggtttttcccaata 3015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 34457418 - 34457295
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||||||||  |||| ||||||||||||  ||||||||||  ||||||||||    
T  34457418 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaactcttctcaagagtcttgtctatccgat 34457319  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  34457318 gtgggacttgggtttttcccaata 34457295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 3763021 - 3762896
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||  |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  3763021 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactcttctcaagagtcttatctatccgat 3762922  T
Q  411 gtaggacttgggtttttcccaataaa 436  Q
    || |||| ||||||||||||||||||    
T  3762921 gtgggacatgggtttttcccaataaa 3762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 48237 - 48422
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  48237 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 48336  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  |||||   |||| ||||||||||||||||||||||    
T  48337 ggcttgtaaggtgaggattgcctcctctttataaacttttctcaagagtcttgtctat--aatgtgggacttgggtttttcccaataa 48422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 24125177 - 24125054
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||  ||||||||||  | ||||||||    
T  24125177 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtttatccgat 24125078  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    ||||||||||||||||||||||||    
T  24125077 gtaggacttgggtttttcccaata 24125054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 35527262 - 35527388
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc-aagagtctcatctatccg 408  Q
    |||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||| ||||||||  || |||||||| | |||||||    
T  35527262 ctgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttctctaagagtcttagctatccg 35527361  T
Q  409 atgtaggacttgggtttttcccaataa 435  Q
    |||| ||||||||||||||||||||||    
T  35527362 atgtgggacttgggtttttcccaataa 35527388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 48099 - 48216
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||    
T  48099 aattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtggga 48198  T
Q  417 cttgggtttttcccaata 434  Q
    ||||||||||||||||||    
T  48199 cttgggtttttcccaata 48216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 2908557 - 2908674
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||||||| ||| |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  |||||||||||| |||    
T  2908557 aatttgggatctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatccgatgtggga 2908656  T
Q  417 cttgggtttttcccaata 434  Q
    ||||||||||||||||||    
T  2908657 cttgggtttttcccaata 2908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 339 - 434
Target Start/End: Original strand, 43490273 - 43490368
Alignment:
Q  339 tacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||  ||| |||||||  |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  43490273 tacaaaaccggcttgtaaggtgaagattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 43490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 259 - 434
Target Start/End: Original strand, 2908705 - 2908881
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    |||||| ||||||| |||||||    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  2908705 ttggtgtgtgaataggtttaggtgacccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 2908804  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| |||| ||||| |||||||||| |  |||| |||||  |||||| ||||| |||||||| ||||||||||||    
T  2908805 gtgaggattgcctcctctttataaactattctcaaaagtcttgtctatctgatgtgggacttggatttttcccaata 2908881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 28156211 - 28156028
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagt---ttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaa 344  Q
    |||||| || |||||||||||||| ||   |||||| | |||| ||||||| ||||||| ||| | ||||| ||||||||| || | |||| ||||||||    
T  28156211 ctctttgggcttggtgcgtgaataggtggtttaggcggcccttgaattcgacaagttctgatatcatgttgaaatttggggcctaattcatccttacaaa 28156112  T
Q  345 accgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||  ||| |||||||| |||| ||||| ||||||||||||      ||||||  |||||||||||| |||||||||||||||||||||    
T  28156111 accggcttgtaaggtgaggattgcctcctctttataaactct------gagtcttgtctatccgatgtgggacttgggtttttcccaata 28156028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 39268089 - 39268009
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  39268089 aaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 39268009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 15287168 - 15287045
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||| |||||| ||||||  |||||||||||  ||| |||||||| |||| ||||| || ||| || ||  |||||||||| |||||||||||    
T  15287168 tgttgaaattttgggtctaactcatcattacaaaaccggcttgtaaggtgaggattgcctcctcttaatatacccttctcaagagtcttatctatccgat 15287069  T
Q  411 gtaggacttgggtttttcccaata 434  Q
     |||||||||||||||||||||||    
T  15287068 ataggacttgggtttttcccaata 15287045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 376 - 434
Target Start/End: Original strand, 18107532 - 18107590
Alignment:
Q  376 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18107532 ttataaactctcatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 18107590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 330 - 432
Target Start/End: Complemental strand, 30330745 - 30330643
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||||||||||| |||| |||||||| |||| ||||| | |||||||||| ||  ||||||| ||||||||||||| |||||||| |||||||    
T  30330745 actcatccttacaaaaccggtttgtaaggtgaggattgcctcctctatataaactctaattcagagtcttatctatccgatgtgggacttggatttttcc 30330646  T
Q  430 caa 432  Q
    |||    
T  30330645 caa 30330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 36878397 - 36878318
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||| ||||||| ||||| |||||| ||||||||||||||    
T  36878397 aaggtgaggattgtctcctgtttataaactcttatcaaaagtcttatctatctgatgtgggactttggtttttcccaata 36878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 38131879 - 38131772
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  |||||||||  |||||||||||    
T  38131879 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatctatccgat 38131780  T
Q  411 gtaggact 418  Q
    || |||||    
T  38131779 gtgggact 38131772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 18107939 - 18107825
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    ||||||||| | |||| |||||||||||| |||  |||||||| | || ||||| |||||||| ||| ||||||||||| ||| || |||||| ||| ||    
T  18107939 ttggggtctaattcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaattcttatcaagagtcttatcgattcgatgtgggaatt 18107840  T
Q  420 gggtttttcccaata 434  Q
    |||||||||||||||    
T  18107839 gggtttttcccaata 18107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 432
Target Start/End: Complemental strand, 32501271 - 32501205
Alignment:
Q  366 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 432  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||    
T  32501271 tgtctcctttttacaaactcttatcaagagtcttatctatccgatgtgggacttggatttttcccaa 32501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 11632548 - 11632423
Alignment:
Q  309 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 408  Q
    ||||||| ||||||||| |  |||||| ||||||||||||  ||  |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||    
T  11632548 cctgttgaaatttggggcccaactcatccttacaaaaccggcttataaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccg 11632449  T
Q  409 atgtaggacttgggtttttcccaata 434  Q
    |||| |||||||| ||||| ||||||    
T  11632448 atgtgggacttggattttttccaata 11632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 321 - 434
Target Start/End: Original strand, 37656731 - 37656844
Alignment:
Q  321 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 420  Q
    ||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||  ||||||    
T  37656731 tggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttg 37656830  T
Q  421 ggtttttcccaata 434  Q
     |||||| ||||||    
T  37656831 agttttttccaata 37656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 321 - 434
Target Start/End: Original strand, 37781843 - 37781956
Alignment:
Q  321 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 420  Q
    ||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||  ||||||    
T  37781843 tggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttg 37781942  T
Q  421 ggtttttcccaata 434  Q
     |||||||||||||    
T  37781943 agtttttcccaata 37781956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 434
Target Start/End: Complemental strand, 395463 - 395359
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    ||||||||||||||||||||  || ||||| || | || ||||| |||||||||||| ||||||| ||  |||||||| |||| |||||||||| |||||    
T  395463 actcattcttacaaaaccgacatgtaaggttaggagtgcctcctatttataaactcttatcaagaatcctatctatccaatgtgggacttgggtctttcc 395364  T
Q  430 caata 434  Q
    |||||    
T  395363 caata 395359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 434
Target Start/End: Complemental strand, 39268322 - 39268218
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||| ||||||| ||   |||||||| | || ||||  |||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||    
T  39268322 actcatccttaaaaaaccggttcataaggtgaggagtgcctccaatttataaactcttatcaagagttttatctatccgatgtgggacttgggtttttcc 39268223  T
Q  430 caata 434  Q
    |||||    
T  39268222 caata 39268218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 285 - 434
Target Start/End: Original strand, 36307885 - 36308034
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| ||  | |||||| |||||||| |||  |||||||||||| |||| ||||| |||||||||    
T  36307885 ccttgaattcgacaagctctgataccatgttgaaatttgaggcttaactcatccttacaaatccggcttgcaaggtgaggattgactcctctttataaac 36307984  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||  |||||||||| ||||||||||||| | |||||  ||||| ||||||    
T  36307985 tct-ttcaagagtcttatctatccgatgtggaacttgaattttttccaata 36308034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 22732752 - 22732849
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||| ||   ||||||| | ||||| || ||||||||||||||||| ||||||||||||||||||||  || |||| |||||| |||||    
T  22732752 cttacaaaaccgacttttgaggtgaggagtgtcttctctttataaactctcatcaggagtctcatctatccgatgtgagatttggatttttctcaata 22732849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 418
Target Start/End: Complemental strand, 13844129 - 13844021
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||| ||| || |||||| |||||||||||| |||| |||||||||| || ||||| ||||||||||||  ||||||||   ||||||| ||    
T  13844129 ctgttgaaatttagggcctaactcatccttacaaaaccgttttgtaaggtgagaagtgcctcctctttataaactcttctcaagagtactatctatcaga 13844030  T
Q  410 tgtaggact 418  Q
    ||| |||||    
T  13844029 tgtgggact 13844021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 28156354 - 28156231
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||||| ||| |||||| |||||| ||||   ||| |||||||| |||| ||||| ||||||||||||  |||||||| |   | ||||||    
T  28156354 ctgttgaaatttgggttctaactcatccttacataaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagt-tttgccatccga 28156256  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  28156255 tgtgggacttgggtttttcccaata 28156231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 10668431 - 10668352
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| | |||||||| ||| |||||||| ||||||||| | ||||||  ||||| |||||||||||||||||||||    
T  10668431 aaggtgaggagtgtctcctctttgtaaactcttatcaagagttttatctatttgatgtgggacttgggtttttcccaata 10668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 426
Target Start/End: Complemental strand, 17135589 - 17135519
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 426  Q
    ||||||| | |||||||| |||||||||||| ||||||||||| || |||||||||| ||||||| |||||    
T  17135589 aggtgaggagtgtctcctctttataaactcttatcaagagtcttatttatccgatgtgggacttgagtttt 17135519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 433
Target Start/End: Original strand, 18873227 - 18873305
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 433  Q
    |||||||| |||| ||||| | |||||||||| ||||| ||||| ||||||||||||| |||| |||| ||||||||||    
T  18873227 aaggtgaggattgcctcctctatataaactcttatcaatagtcttatctatccgatgtgggacatgggcttttcccaat 18873305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 4563724 - 4563805
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |||||||| |||||||||| | | |||||||| ||||| ||||| |||||||||||||  ||| || |||||||||||||||    
T  4563724 aaggtgaggattgtctcctctatgtaaactcttatcaaaagtcttatctatccgatgtgagacatgagtttttcccaataaa 4563805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 369 - 434
Target Start/End: Original strand, 17130036 - 17130096
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| ||||||||||||||||||||||||     ||||||||| |||||||||||||||||||||    
T  17130036 ctcctatttataaactctcatcaagagtct-----atccgatgtgggacttgggtttttcccaata 17130096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 29432521 - 29432420
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||||| || || |||||| ||||||||||||  ||| |||||||||| || ||||| |||||||||||| ||||||||||  ||||| || |||| |||    
T  29432521 aatttgtggcctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtggga 29432422  T
Q  417 ct 418  Q
    ||    
T  29432421 ct 29432420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 37995629 - 37995730
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||    
T  37995629 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtgctatctatccgatgtggga 37995728  T
Q  417 ct 418  Q
    ||    
T  37995729 ct 37995730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 346
Target Start/End: Original strand, 35527114 - 35527202
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaac 346  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || || ||| ||||||||||    
T  35527114 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaacacatccttacaaaac 35527202  T

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Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 873685 - 873792
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| | ||||||||||  |||||||||  |||||||||||    
T  873685 tgttgaaatttggggcctaactcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaactcttctcaagagtcctatctatccgat 873784  T
Q  411 gtaggact 418  Q
    || |||||    
T  873785 gtgggact 873792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 1028082 - 1028189
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || ||||||  | ||||||||| |||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  1028082 tgttgaaatttggggcctaactcatcgtcacaaaaccggtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 1028181  T
Q  411 gtaggact 418  Q
    || |||||    
T  1028182 gtgggact 1028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 5127946 - 5128025
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||  ||||||||||||||||||  ||||||| ||  |||||||||||||| |||||| ||||| ||||||    
T  5127946 aaggtgaggattacctcctttttataaactcttctcaagagccttgtctatccgatgtagaacttggattttttccaata 5128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 2716652 - 2716538
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    |||||| || |||||| ||||||||||||  ||  |||||||| | || |||||  ||||||||||| ||||||||||  || ||||| || | ||||||    
T  2716652 ttggggcctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaactcttatcaagagtcatatttatccaatctgggactt 2716553  T
Q  420 gggtttttcccaata 434  Q
    |||| ||||||||||    
T  2716552 gggtatttcccaata 2716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 4296654 - 4296779
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctc--atctatccg 408  Q
    ||||| |||||  ||||| |||||| ||||| |||| || ||| |||||||| |||| ||||| |||||| |||||  |||||||||||  ||||||||     
T  4296654 tgttgaaattttaggtctaactcatccttaccaaactgacttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcttatctatcca 4296753  T
Q  409 atgtaggacttgggtttttcccaata 434  Q
    | ||  ||||||||||||| ||||||    
T  4296754 aggtgagacttgggttttttccaata 4296779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 13413823 - 13413782
Alignment:
Q  393 gagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  13413823 gagtcttatctatccgatgtgggacttgggtttttcccaata 13413782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 29008121 - 29008064
Alignment:
Q  377 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||  ||||||||||| ||||||||||||| | || ||||||||||||||||    
T  29008121 tataaactcctatcaagagtcttatctatccgatgtggaacatgggtttttcccaata 29008064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 40168848 - 40168949
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| ||| |||| |||| ||||| |||||| |||||  |||||||||| ||||||| |||    
T  40168848 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaagatgaggattgcctcctctttatatactcttctcaagagtcttatctatctgat 40168947  T
Q  411 gt 412  Q
    ||    
T  40168948 gt 40168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 418
Target Start/End: Original strand, 22196561 - 22196649
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| | |||||  | |||||||| ||||||||||||  |||||||||  ||||||||||||| |||||    
T  22196561 actcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggact 22196649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 386
Target Start/End: Complemental strand, 24994185 - 24994109
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 386  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  24994185 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactct 24994109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 35527199 - 35527247
Alignment:
Q  380 aaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 428  Q
    |||||||  |||||||||| ||||||||||||| |||||||||||||||    
T  35527199 aaactcttctcaagagtcttatctatccgatgtgggacttgggtttttc 35527247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 38663356 - 38663276
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 397  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||  | || ||||| |||||||||||| ||||||||||    
T  38663356 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtc 38663276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 13843812 - 13843705
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |  | ||||| ||||||||||||  ||||||||   ||||||| |||    
T  13843812 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatctatctgat 13843713  T
Q  411 gtaggact 418  Q
    || |||||    
T  13843712 gtgggact 13843705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 12965235 - 12965317
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | ||  |||| |||||||||||| ||||||    
T  12965235 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactctgatcaag 12965317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 15286963 - 15286845
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctccttttta-taaactctcatcaagagtctcatctatccgatgtagg 415  Q
    |||||||||||| | |||| |||||||||||   ||| || ||||| ||||  |||| || | || |||||  |||||||||| |||||||||||||  |    
T  15286963 aatttggggtctaattcatccttacaaaaccagcttgtaaagtgaggattgcatcctcttaaatatactcttctcaagagtcttatctatccgatgtgag 15286864  T
Q  416 acttgggtttttcccaata 434  Q
    |||||| ||||||||||||    
T  15286863 acttggatttttcccaata 15286845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 30870918 - 30870992
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||||| ||||  |||| ||||||||||||  |||||| ||| ||||||||||||| | | ||||||||||||    
T  30870918 aaggtgaggattgcttcctctttataaactcttctcaagaatcttatctatccgatgtggaatttgggtttttcc 30870992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 1892098 - 1892175
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatcc 407  Q
    |||||| ||||||||||||  ||| |||||||| |  | ||||| |||||||| ||||||||||||||  ||||||||    
T  1892098 actcatccttacaaaaccggcttgtaaggtgaggagggcctcctctttataaattctcatcaagagtcctatctatcc 1892175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 6918927 - 6918988
Alignment:
Q  287 ttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccg 348  Q
    |||||||||| ||| |||||||| ||||| ||||||||| || ||||||  |||||||||||    
T  6918927 ttaaattcgacaagctctaatacatgttgaaatttggggcctaactcatatttacaaaaccg 6918988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 6919174 - 6919235
Alignment:
Q  287 ttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccg 348  Q
    |||||||||| ||| |||||||| ||||| ||||||||| || ||||||  |||||||||||    
T  6919174 ttaaattcgacaagctctaatacatgttgaaatttggggcctaactcatatttacaaaaccg 6919235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 24918270 - 24918201
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 386  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  24918270 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactct 24918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 1893844 - 1893780
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||||||||||| ||||||||||  |||||||| || |  |||||| |||||||||||||    
T  1893844 tcctctttataaactcttatcaagagtcgtatctatccaatatgagacttgagtttttcccaata 1893780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 432
Target Start/End: Complemental strand, 2716449 - 2716337
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    |||||| || |||||| |||||||||||   ||  |||||||| | |||||||| |||||||||| | ||||| |||   |||||| |||||  ||||||    
T  2716449 ttggggcctaactcatccttacaaaaccagcttataaggtgaggagtgtctcctctttataaacttttatcaacagtaatatctattcgatgggggactt 2716350  T
Q  420 gggtttttcccaa 432  Q
     ||||||||||||    
T  2716349 tggtttttcccaa 2716337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 384
Target Start/End: Original strand, 24792124 - 24792184
Alignment:
Q  324 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaact 384  Q
    ||||| |||||||||||||||||||  ||| | |||||| | |||||||| ||||||||||    
T  24792124 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 24792184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 427
Target Start/End: Complemental strand, 40961820 - 40961748
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    |||||||||| ||||||||  ||||||||||| ||||| ||||| ||||||| ||| | | ||||| ||||||    
T  40961820 aaggtgagaagtgtctcctcgttataaactcttatcaaaagtcttatctatctgatatggaacttgagttttt 40961748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 16876936 - 16877122
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  16876936 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 16877035  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  16877036 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16877122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 28149909 - 28149785
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| ||||||||| | ||||||||||    
T  28149909 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatctatccga 28149810  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||| ||||||||||||||||    
T  28149809 tgtgggacatgggtttttcccaata 28149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 26098869 - 26098746
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| ||| |||||||    
T  26098869 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgat 26098770  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    ||||||||||||||||||||||||    
T  26098769 gtaggacttgggtttttcccaata 26098746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 15102613 - 15102737
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccga-tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||||  | ||||| | || ||||| |||||||||||||||||||||||||||||||  ||    
T  15102613 tgttgaaatttggggtctaactcatccttacaaaaccggctttgtgaagtgaggagtgcctcctctttataaactctcatcaagagtctcatctatttga 15102712  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  15102713 tgtgggacttgggtttttcccaata 15102737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 15102743 - 15102863
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||  |||||| |||||||||||| ||||  | ||||| | || ||||| |||||||||||||||||||||||||||||||| |||    
T  15102743 tgttgaaatttggggtc--actcatccttacaaaaccggtttgtgaagtgaggagtgactcctctttataaactctcatcaagagtctcatctatctgat 15102840  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  15102841 gt-ggacttgggtttttcccaata 15102863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 25999138 - 25999015
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || ||||||||||||||||||| ||   |||||||| | |||||||| |||||||||| | |||| |||||| ||| |||||||    
T  25999138 tgttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgat 25999039  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  25999038 gtgggacttgggtttttcccaata 25999015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 11313371 - 11313494
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  11313371 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 11313470  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || ||| |||||||||||||||||    
T  11313471 gtgggatttgggtttttcccaata 11313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 15101100 - 15101223
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  15101100 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 15101199  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||| ||||||||||||    
T  15101200 gtgggacttggatttttcccaata 15101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 16590299 - 16590176
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||||| |||   |||||||||  ||||||||||    
T  16590299 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgat 16590200  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  16590199 gtgggacttgggtttttcccaata 16590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 16605081 - 16605204
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||||| |||   |||||||||  ||||||||||    
T  16605081 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgat 16605180  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  16605181 gtgggacttgggtttttcccaata 16605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 26098457 - 26098334
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||| || ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  26098457 tgttgaaatttggggcctaactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 26098358  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  26098357 gtgggacttgggtttttcccaata 26098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 290 - 434
Target Start/End: Complemental strand, 26098685 - 26098540
Alignment:
Q  290 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 388  Q
    ||||||| ||||||| ||||| ||||| ||||||||| || |||||||||||||||| || ||   |||||||| | |||||||| |||||||||| | |    
T  26098685 aattcgacaagttctgataccatgttgaaatttggggcctaactcattcttacaaaagcggttcataaggtgaggagtgtctcctctttataaactatta 26098586  T
Q  389 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||| |||||| ||| |  |||||| |||||||||||||||||||||    
T  26098585 tcatgagtcttatcaagacgatgtgggacttgggtttttcccaata 26098540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 11317019 - 11316835
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||  |||||||||||    
T  11317019 ctctttgggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcaaccttacaaaacc 11316922  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  |||  | ||||| | || | ||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  11316921 ggcttgtgaagtgaggagtgccccctctttataaactctcatcaagagtctcatctatccgatgtggaacttgagtttttcccaata 11316835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 11317099 - 11317040
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  11317099 tttataaactctcatcaagagtttcatctatccgatgtgggacttgggtttttcccaata 11317040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 25998932 - 25998809
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || | |||| ||||||||| || ||   |||||||| | |||||||| |||||||||| | |||| |||||| |||||||||||    
T  25998932 tgttgaaatttggggcctaaatcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgat 25998833  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  25998832 gtgggacttgggtttttcccaata 25998809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 5269262 - 5269363
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||| |||||| |||||| ||||||||||||  ||| |||||||| |||| || || ||||||||||||  |||||||||| |||||||||||    
T  5269262 tgttgtaatttagggtctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgat 5269361  T
Q  411 gt 412  Q
    ||    
T  5269362 gt 5269363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 24558692 - 24558575
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| || |||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||    
T  24558692 aatttggggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtggga 24558593  T
Q  417 cttgggtttttcccaata 434  Q
    ||||| ||||||||||||    
T  24558592 cttggatttttcccaata 24558575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 19291907 - 19292023
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||| | || |||||| ||||||||||| | ||  |||||||| |||||||||| | || ||||||| ||||||||||| |||||||||||    
T  19291907 tgttgaaatttggagcctaactcatccttacaaaaccaacttataaggtgaggattgtctcctctatacaaactcttatcaagagtcttatctatccgat 19292006  T
Q  411 gtaggacttgggttttt 427  Q
    || |||||| |||||||    
T  19292007 gtgggactttggttttt 19292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 24558904 - 24558780
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| |||||||||||   ||| |||||||| |||||||||| ||||||||||||  | |||||||| ||||||||||    
T  24558904 ctgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaactcttctaaagagtcttatctatccga 24558805  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    |||  ||| | ||||||| ||||||    
T  24558804 tgtgagacataggttttttccaata 24558780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 10418327 - 10418434
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||||||||||||   |||||||||||    
T  10418327 tgttggaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatctatccgat 10418426  T
Q  411 gtaggact 418  Q
    || |||||    
T  10418427 gtgggact 10418434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 305 - 418
Target Start/End: Original strand, 12134466 - 12134579
Alignment:
Q  305 aatacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatcta 404  Q
    |||| |||||| ||||||||| || |||||| |||||||||||| |||| ||||| || | |||||||| ||||||||||||  ||||||||   |||||    
T  12134466 aataactgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatcta 12134565  T
Q  405 tccgatgtaggact 418  Q
    |||||||| |||||    
T  12134566 tccgatgtgggact 12134579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 311 - 428
Target Start/End: Original strand, 16876819 - 16876936
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||| |  ||||||||||  ||||||| ||    
T  16876819 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatcctat 16876918  T
Q  411 gtaggacttgggtttttc 428  Q
    || |||||||| ||||||    
T  16876919 gtgggacttggatttttc 16876936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 285 - 409
Target Start/End: Original strand, 19712571 - 19712696
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||||||| ||||| ||||||||||||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| |||||||||    
T  19712571 ccttgaattcgacaagttctgataccatgttgtaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaac 19712670  T
Q  384 tctcatcaagagtctcatctatccga 409  Q
    |||  ||||||||   ||||||||||    
T  19712671 tcttctcaagagtgctatctatccga 19712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 6623443 - 6623539
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |||||||||  ||| |||||||| |||| | ||  |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  6623443 acaaaaccggcttgtaaggtgaggattgcccccactttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataaa 6623539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 30526889 - 30526832
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggac-ttgggtttttccca 431  Q
    |||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  30526889 tttataaactctcatcaagagtctcatctatccgatgtgggactttaggtttttccca 30526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 30539471 - 30539415
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 431  Q
    |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  30539471 tttataaactcttatcaaaagtcttatctatccgatgtgggacttgggtttttccca 30539415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 19054608 - 19054501
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  |||||||| | |||||||||||    
T  19054608 tgttgaaatttggggactaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaagagtgttatctatccgat 19054509  T
Q  411 gtaggact 418  Q
    || |||||    
T  19054508 gtgggact 19054501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 19712393 - 19712516
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||| ||  ||| |||||| | |||| |||||  ||||||||| |  |||||||||| |||||||||||    
T  19712393 tgttgaaatttggggcctaactcatccttacaaaatcggcttgtaaggtggggattgcctcctccttataaactattctcaagagtcttatctatccgat 19712492  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || | || ||| ||||||||||||    
T  19712493 gtggaacatggatttttcccaata 19712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 26394622 - 26394543
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| | || || |||||||||||||    
T  26394622 aaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtggaacatgagtttttcccaata 26394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 30539350 - 30539243
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| ||   |||| ||||||||||||  ||| |||||||| | ||||||   |||||||||||| ||||||||||| |||||||||||    
T  30539350 tgttgaaatttggggcctagttcatccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttataaactcttatcaagagtcttatctatccgat 30539251  T
Q  411 gtaggact 418  Q
    || |||||    
T  30539250 gtgggact 30539243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 15293869 - 15293987
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||||||||||| | |||| |||| |||||||  |||  ||||||| | ||||||   |||||||||||||||||||| ||| ||||||| ||||   ||    
T  15293869 aatttggggtctaattcatccttataaaaccggcttgtgaggtgaggaatgtctctgctttataaactctcatcaagaatctaatctatctgatgcgaga 15293968  T
Q  417 cttgggtttttcccaataa 435  Q
    |||| ||||||||||||||    
T  15293969 cttgagtttttcccaataa 15293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 249 - 342
Target Start/End: Original strand, 18494407 - 18494501
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttaca 342  Q
    ||||||||| |||||||||||||| |||||||||| |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| ||||||    
T  18494407 ctctttaggcttggtgcgtgaataggtttaggcagcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttaca 18494501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 427
Target Start/End: Complemental strand, 2902902 - 2902819
Alignment:
Q  342 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    |||||||| ||| ||||||||| | ||||||| || ||||||||| || |||||||| ||||||||||||||||||||| ||||||    
T  2902902 aaaaccgacttgtaaggtgagagt-gtctcctctt-ataaactcttatgaagagtcttatctatccgatgtaggacttgagttttt 2902819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 8144126 - 8144025
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||    
T  8144126 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtggga 8144027  T
Q  417 ct 418  Q
    ||    
T  8144026 ct 8144025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 10733433 - 10733534
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  |||||||| | |||| ||| |||| |||    
T  10733433 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtgttatctgtccaatgtggga 10733532  T
Q  417 ct 418  Q
    ||    
T  10733533 ct 10733534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 1744831 - 1744938
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| ||    
T  1744831 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtactatctatccaat 1744930  T
Q  411 gtaggact 418  Q
    || |||||    
T  1744931 gtgggact 1744938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 24055098 - 24055205
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  ||||||||   |||||||||||    
T  24055098 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagtgctatctatccgat 24055197  T
Q  411 gtaggact 418  Q
    || |||||    
T  24055198 gtgggact 24055205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 434
Target Start/End: Original strand, 18494284 - 18494386
Alignment:
Q  332 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 431  Q
    |||| ||||||||||||  ||| ||| |||| |||| ||||| |||||||| | |  ||||||||||  |||||| ||||| ||| ||||||||||||||    
T  18494284 tcatccttacaaaaccggcttgtaagatgaggattgcctcctctttataaattattctcaagagtcttgtctatctgatgtgggatttgggtttttccca 18494383  T
Q  432 ata 434  Q
    |||    
T  18494384 ata 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 418
Target Start/End: Original strand, 31926 - 31969
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||    
T  31926 tttataaactcttatcaagagtcttatctatccgatgttggact 31969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Complemental strand, 25184089 - 25184018
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||||||||  ||| | |||||| ||||||| || |||||||||||| ||||||| ||| ||||||||||||    
T  25184089 acaaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatctatccgatg 25184018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 12124760 - 12124806
Alignment:
Q  388 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||||||||    
T  12124760 atcaatagtctcatctatctgatgtgggacttaggtttttcccaata 12124806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 17147894 - 17147968
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactc 385  Q
    ||||| |||||| || || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||    
T  17147894 tgttgaaatttgtggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactc 17147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 22911485 - 22911539
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctc 371  Q
    ||||| |||||| |||||||||||||||||||| ||| |||||||| | ||||||    
T  22911485 aatttagggtctaactcattcttacaaaaccgacttgtaaggtgaggagtgtctc 22911539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 434
Target Start/End: Original strand, 2923011 - 2923068
Alignment:
Q  377 tataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| ||||||||||  |||||||||| || |||| || |||||||||||||    
T  2923011 tataaactcttatcaagagtcatatctatccgacgtgggacatgagtttttcccaata 2923068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 17096687 - 17096788
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| | || ||| | | |||||| ||||||||||||  |||||| ||  |||||| ||||    
T  17096687 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtacggcgaggagtttctcctctttataaactcttctcaagactcctatctattcgat 17096786  T
Q  411 gt 412  Q
    ||    
T  17096787 gt 17096788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 28072467 - 28072568
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||||||||| | ||||||| ||||||| || | ||| ||| |||| | | |||||| ||||||||||||  ||||| |||| ||||| ||||||| |||    
T  28072467 aatttggggtataactcattgttacaaatccaacttgtaagatgaggagtatctcctctttataaactcttgtcaagcgtcttatctaaccgatgtggga 28072566  T
Q  417 ct 418  Q
    ||    
T  28072567 ct 28072568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 30527083 - 30527034
Alignment:
Q  385 ctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||| ||||||||||||||| ||||||| ||| || ||||||    
T  30527083 ctcatcaagagtttcatctatccgatgtgggacttgagttgtttccaata 30527034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 27914321 - 27914397
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    ||||||||| || |||||| ||||||||||||  ||| ||||| || | || ||||| |||||||||||| ||||||    
T  27914321 aatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactctgatcaag 27914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 29742469 - 29742546
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||| ||||| |||||||||| |||||||||||||  |  ||||||||| ||||||  |||||||| ||||    
T  29742469 aaggtgaggattgcctcctctttataaactttcatcaagagtct--taaatccgatgtgggacttaagtttttcctaata 29742546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 5e-39; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 12016817 - 12017003
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||| ||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  12016817 ctctttgggcttggtgtgtgaataggtttaggcagtccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 12016916  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  12016917 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12017003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 17077072 - 17077256
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    ||||||||| |||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||  |||||||||||    
T  17077072 ctctttaggcttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaacc 17077169  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||||||||||||  ||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17077170 ggcttgcaaggtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaata 17077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 28246099 - 28245985
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    |||||| || |||||| |||||||||||| ||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||||| ||||||    
T  28246099 ttggggcctaactcatccttacaaaaccggtttgcaaggtgaggattgccttctctttataaactctcatcaagagtctcatctatccgatgtgggactt 28246000  T
Q  420 gggtttttcccaata 434  Q
    |||||||||||||||    
T  28245999 gggtttttcccaata 28245985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 435
Target Start/End: Complemental strand, 28245964 - 28245782
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| ||||||||||||||||| ||  |||  | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| |||||||||||    
T  28245964 ctctttgggtttggtgcgtgaataggt--aggtggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaacc 28245867  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |  |||||||||||| |||| ||||| |||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||||    
T  28245866 ggcttgcaaggtgaggattgcctcctctttataaactctcat---gagtctcatctatccgatgtgggacttgggtttttcccaataa 28245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 17076929 - 17077052
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||  ||||||||||||  |||||| |||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  17076929 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaaagtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgat 17077028  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  17077029 gtgggacttgggtttttcccaata 17077052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 43943788 - 43943664
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  43943788 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 43943689  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || ||||||||||||||||||||||    
T  43943688 gtgggacttgggtttttcccaataa 43943664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 25753594 - 25753717
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||  || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| |||||||||||  ||||||||||    
T  25753594 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgat 25753693  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  25753694 gtgggacttgggtttttcccaata 25753717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 27634315 - 27634438
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || |||||| ||||||||| ||  ||| ||||||||||||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  27634315 tgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatctatccgat 27634414  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||| ||||||||||||||    
T  27634415 gtgggactttggtttttcccaata 27634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 262 - 434
Target Start/End: Complemental strand, 5488532 - 5488359
Alignment:
Q  262 gtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtg 360  Q
    ||||||||||| |||||||| | |||  || |||| ||| ||| ||| | ||||| |||||| || || |||||| ||||||||||||  ||| ||||||    
T  5488532 gtgcgtgaataggtttaggcggccctagaactcgacaagctctgatatcatgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtg 5488433  T
Q  361 agaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    || |||| ||||| ||||||||||||  |||||||||| || |||||||||| |||||||||||||||||||||    
T  5488432 aggattgcctcctctttataaactcttctcaagagtcttatttatccgatgtgggacttgggtttttcccaata 5488359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 12016672 - 12016795
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  12016672 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 12016771  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  12016772 gtgggacttgggtttttcccaata 12016795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 28395292 - 28395168
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||| ||    
T  28395292 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt-tcaagagtcttatctatccaat 28395194  T
Q  411 gtaggacttgggtttttcccaataaa 436  Q
    || |||||||||||||||||||||||    
T  28395193 gtgggacttgggtttttcccaataaa 28395168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 29113565 - 29113441
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| |||||||||||   ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||    
T  29113565 ctgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctga 29113466  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||| ||||||||||||||||    
T  29113465 tgtgggacatgggtttttcccaata 29113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 21498646 - 21498523
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| |||  || || |||||| |||||  ||||||||||  ||||||||||    
T  21498646 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattaccttctctttatatactcttctcaagagtcttgtctatccgat 21498547  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  21498546 gtgggacttgggtttttcccaata 21498523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 53864020 - 53863897
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||| ||||| |||||| |||||||||||| ||   |||||||| | |||||||| |||||||||| | ||||| ||||| |||||||||||    
T  53864020 tgttgaaatttgtggtctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcaaaagtcttatctatccgat 53863921  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || ||||||||||||||| |||||    
T  53863920 gttggacttgggtttttctcaata 53863897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 54210492 - 54210369
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| ||  ||||||||  ||||| |||||| |||||  ||||||||||  ||||||||||    
T  54210492 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgagaattacctcctctttatatactcttctcaagagtcttgtctatccgat 54210393  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  54210392 gtgggacttgggtttttcccaata 54210369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 56511439 - 56511289
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||    
T  56511439 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaac 56511340  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||| ||||||||||| |||||  | |||| |||||||||||||||||||||    
T  56511339 tcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 56511289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 3055880 - 3055776
Alignment:
Q  329 gactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 428  Q
    ||||||| ||||||||||||| ||  |||||||| | ||  |||| |||||||||||||||||||||||  |||||||| |||| |||||||||||||||    
T  3055880 gactcatccttacaaaaccgacttttaaggtgaggagtgcatcctctttataaactctcatcaagagtcctatctatccaatgtgggacttgggtttttc 3055781  T
Q  429 ccaat 433  Q
    |||||    
T  3055780 ccaat 3055776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 28497222 - 28497326
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||||||||||| ||| ||||  ||  | || ||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  28497222 actcatccttacaaaaccggtttacaagccgaagagtgcctcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcc 28497321  T
Q  430 caata 434  Q
    |||||    
T  28497322 caata 28497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 1922980 - 1923103
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||||||||||||| |||| |||||||  ||| | |||||  ||||  |||| ||||||||||||  |||||||||| ||||||| |||    
T  1922980 tgttgaaatttggggtctgactcatccttataaaaccggcttgtatggtgatgattgcttcctctttataaactcttctcaagagtcttatctatctgat 1923079  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||| ||||||||||||||||    
T  1923080 gtgggacatgggtttttcccaata 1923103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 8559960 - 8560083
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||  || ||||| |||| |||||   |||||||||| ||||||||||| |||||||||||    
T  8559960 tgttgaaatttggggtctaactcatccttacaaaaccggcttctaaagtgaggattgcctcctcgatataaactcttatcaagagtcttatctatccgat 8560059  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || ||||||||  |||||||||||    
T  8560060 gtgggacttggacttttcccaata 8560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 33629835 - 33629651
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| ||  |||  |||||| || |||| ||| ||| ||||| ||||| ||||||||| || ||||||  | ||||||||    
T  33629835 ctctttgggcttggtgcgtgaataggt--aggtggtccttgaagtcgacaagctctgataccatgttgaaatttggggcctaactcatcgtcacaaaacc 33629738  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  |||  | ||||| | |  ||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  33629737 ggcttgtgatgtgaggagtacctcctatttataaactctcatcaagagtctcatctatccaatgtggaacttgggtttttcccaata 33629651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 39110996 - 39110899
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||  ||| |||| ||| |||||||||| |||||| |||||  |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  39110996 cttacaaaaccggcttgtaaggcgaggattgtctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 39110899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 418
Target Start/End: Complemental strand, 990679 - 990555
Alignment:
Q  295 gataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    |||||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||| ||| |||||||| | || ||||| ||||||||||||  |||||    
T  990679 gataagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaag 990580  T
Q  394 agtctcatctatccgatgtaggact 418  Q
    ||| | ||||||||||||| |||||    
T  990579 agtgttatctatccgatgtgggact 990555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 8304988 - 8305067
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| | |||||||||| ||||| ||||| |||||||||||||||||| || |||||||||||||    
T  8304988 aaggtgaggattgtctcctctatataaactcttatcaaaagtcttatctatccgatgtaggacatgagtttttcccaata 8305067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 23350870 - 23350791
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| |||||| ||||| ||||||||||| || |||||||||| ||| |||||||||||||||||    
T  23350870 aaggtgaggattgtctcctctttatatactcttatcaagagtcttatttatccgatgtgggatttgggtttttcccaata 23350791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 56511619 - 56511496
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||| || ||   |||||||| | || ||||| |||||||||||| ||||||||||| |||||  | ||    
T  56511619 tgttgaaatttggggcctaactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaat 56511520  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  56511519 gtgggacttgggtttttcccaata 56511496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 49380898 - 49380992
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||||  ||||||| ||||||||||||    
T  49380898 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttggatttttcccaata 49380992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 33629978 - 33629917
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 430  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  33629978 ctcctatttataaactctcatcaagagtctcatctatccaatgtgggacttgagtttttccc 33629917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 420
Target Start/End: Original strand, 10390437 - 10390573
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||||||||| |||||| |||||||||| | ||   |||||||| | |||||||| |||||||||    
T  10390437 ccttgaattcgacaagctctgataccatgttgaaatttggggtctaactcatccttacaaaactggttcataaggtgaggaatgtctcctctttataaac 10390536  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttg 420  Q
    | | |||||||| || |||||||| |||| |||||||    
T  10390537 tattatcaagagacttatctatccaatgtgggacttg 10390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 22865884 - 22865761
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||| |||||| |||||| |||||||||||| ||   |||||||| | || | ||| |||||||||| | |||||| |||| |||||||||||    
T  22865884 tgttgaaatttagggtctaactcatccttacaaaaccggttcataaggtgaggactgccccctctttataaactattatcaagggtcttatctatccgat 22865785  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || ||||||| ||||||||||||||    
T  22865784 gt-ggacttgagtttttcccaataa 22865761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 52827237 - 52827337
Alignment:
Q  327 ctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 426  Q
    ||||||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||||  |||||||| ||||  ||||||||||||    
T  52827237 ctgactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctatccaatgtgagacttgggtttt 52827336  T
Q  427 t 427  Q
    |    
T  52827337 t 52827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 991319 - 991212
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| | || |||||  |||||||||||  |||||||| | |||||||||||    
T  991319 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaagagtgttatctatccgat 991220  T
Q  411 gtaggact 418  Q
    || |||||    
T  991219 gtgggact 991212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 47491883 - 47491958
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||| ||||||| |||||||||  ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  47491883 tgaggattgcctcctttatataaactcctatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 47491958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 23018585 - 23018484
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  23018585 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtcatatctatccgat 23018486  T
Q  411 gt 412  Q
    ||    
T  23018485 gt 23018484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 3640274 - 3640198
Alignment:
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| |||||||||| | |||||||||| ||||||||||| |||||||||| || |||| || |||||||||||||    
T  3640274 gtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaata 3640198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 420
Target Start/End: Original strand, 7892646 - 7892750
Alignment:
Q  317 aatttggggtctgactcattcttacaaaacc-gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagg 415  Q
    |||||||||||| |||||| |||| | |||| |  ||| |||||||| |||||||||| | |||||||||  ||||||||||| ||||||||||||| ||    
T  7892646 aatttggggtctaactcatccttaaagaaccagcgttgtaaggtgaggattgtctcctctatataaactcatatcaagagtcttatctatccgatgtggg 7892745  T
Q  416 acttg 420  Q
    |||||    
T  7892746 acttg 7892750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 27634457 - 27634557
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || ||||||  ||||||||||    
T  27634457 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatcgttacaaaacc 27634556  T
Q  348 g 348  Q
    |    
T  27634557 g 27634557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 29669351 - 29669459
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||    
T  29669351 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccga 29669450  T
Q  410 tgtaggact 418  Q
    ||| |||||    
T  29669451 tgtgggact 29669459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 312 - 412
Target Start/End: Original strand, 45426926 - 45427026
Alignment:
Q  312 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||| ||||||||| || |||||| ||||||||||||| ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||    
T  45426926 gttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatg 45427025  T
Q  412 t 412  Q
    |    
T  45427026 t 45427026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 26806615 - 26806503
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    |||||| || |||||| |||||||||| |  ||| ||| |||| | ||||||  | ||||||||||| ||||||||||  ||||||||||| | ||||||    
T  26806615 ttggggcctaactcatccttacaaaactggcttgtaagttgaggagtgtctc--tcttataaactcttatcaagagtcctatctatccgatttgggactt 26806518  T
Q  420 gggtttttcccaata 434  Q
    |||||||||||||||    
T  26806517 gggtttttcccaata 26806503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 35399342 - 35399461
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||  |||||||||||    
T  35399342 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaacc 35399441  T
Q  348 gatttgcaaggtgagaattg 367  Q
    |  ||| |||||||| ||||    
T  35399442 ggcttgtaaggtgaggattg 35399461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 50307372 - 50307273
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||||||||| | ||   |||||||| | || ||||  ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  50307372 actcatccttacaaaactggttcataaggtgaggagtgcctccgctttataaactcttgtcaagagtcttatctatccgatgtgggacttgggtttttcc 50307273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 51469596 - 51469489
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||| |||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  51469596 tgttgaaatttggggcctaactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 51469497  T
Q  411 gtaggact 418  Q
    || |||||    
T  51469496 gtgggact 51469489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 52214730 - 52214623
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||||| | ||||| || ||    
T  52214730 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtattatctacccaat 52214631  T
Q  411 gtaggact 418  Q
    || |||||    
T  52214630 gtgggact 52214623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 53386101 - 53386176
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 386  Q
    ||||| |||||| ||||| |||||| ||||||||||||| ||| |||||||| | |||||||| ||||||||||||    
T  53386101 tgttgaaatttgaggtctaactcatccttacaaaaccgacttgtaaggtgaggaatgtctcctctttataaactct 53386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 53740297 - 53740190
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  53740297 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgat 53740198  T
Q  411 gtaggact 418  Q
    || |||||    
T  53740197 gtgggact 53740190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 369 - 435
Target Start/End: Complemental strand, 42312887 - 42312821
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||||| |||||||||| ||||||||||||||||||||||||| | | ||||| |||||| |||||||    
T  42312887 ctcctctttataaactttcatcaagagtctcatctatccgatatggaacttgagttttttccaataa 42312821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 45684208 - 45684286
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||| ||||||| || | |||||||| | ||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  45684208 aggtgaggattgtcttctctatataaacttttatcaagagtcgtatctatccgatgtgggacatgggtttttcccaata 45684286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 49380746 - 49380664
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 422  Q
    |||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||| ||||||||| ||||    
T  49380746 acaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccaatgtaggacctggg 49380664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 33629637 - 33629596
Alignment:
Q  393 gagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33629637 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 33629896 - 33629855
Alignment:
Q  393 gagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33629896 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 418
Target Start/End: Complemental strand, 15665269 - 15665161
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||| || || |||||| ||||||||||||  ||| |||||||| | || ||||| | ||||||||||  |||||||||  ||||||||||    
T  15665269 ctgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatctatccga 15665170  T
Q  410 tgtaggact 418  Q
    ||| |||||    
T  15665169 tgtgggact 15665161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 20093428 - 20093332
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 426  Q
    |||||| ||||||||||||||||  |||||||||| ||  | || |||||||| ||| ||||||||||| || |||| |||||| |||||| |||||    
T  20093428 actcatccttacaaaaccgatttataaggtgagaagtgcattctctttataaattcttatcaagagtcttatttatctgatgtaagacttgagtttt 20093332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 33797117 - 33797221
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| ||||| ||||||  ||| |||||||| | || ||| | |||||||||||| ||||||||||  |||||||| |||| ||| | ||||||||||    
T  33797117 actcatccttacgaaaccggcttggaaggtgaggagtgcctcgtctttataaactcttatcaagagtcctatctatccaatgtgggattcgggtttttcc 33797216  T
Q  430 caata 434  Q
    |||||    
T  33797217 caata 33797221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 3640527 - 3640448
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||| ||||| | | |||||||| ||||||||||| ||||||||||||| |||  || |||||||||||||    
T  3640527 aaggtgaggattgcctcctctatttaaactcttatcaagagtcttatctatccgatgtgggagatgagtttttcccaata 3640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 393
Target Start/End: Original strand, 27048125 - 27048208
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    |||||| ||||||||| || |||||| ||||||||||||  |||||||||||| | || ||||| |||||||||| | ||||||    
T  27048125 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgcaaggtgaggagtgcctcctctttataaacttttatcaag 27048208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 29669667 - 29669774
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||| | |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  29669667 tgttgaaatttggggtttaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctgat 29669766  T
Q  411 gtaggact 418  Q
    || |||||    
T  29669767 gtgggact 29669774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 51470598 - 51470491
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |  | |||||  |||||||||||  |||||||||  |||||||||||    
T  51470598 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatctatccgat 51470499  T
Q  411 gtaggact 418  Q
    || |||||    
T  51470498 gtgggact 51470491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 400373 - 400451
Alignment:
Q  312 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 390  Q
    |||| ||||||||| || |||||| |||||||||| |  |||||||||||  |||||||| | ||||||||||||||||    
T  400373 gttgaaatttggggcctaactcatccttacaaaactgtcttgcaaggtgaatattgtctcatctttataaactctcatc 400451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 5212009 - 5212091
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |||||||||||||||||||  ||| |||||||| |||||||  | |||||||||||| || |||||||| | ||||| |||||    
T  5212009 actcattcttacaaaaccggattgtaaggtgaggattgtctattctttataaactcttattaagagtcttacctatctgatgt 5212091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 14945245 - 14945135
Alignment:
Q  324 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggt 423  Q
    ||||| |||||| |||||||||||| ||   |||||||| ||||  |||| | ||||||||||    |||||||| ||||||||||||| |||| || ||    
T  14945245 ggtctaactcatccttacaaaaccggttcataaggtgaggattgcatcctctatataaactctttcgaagagtcttatctatccgatgtgggacatgtgt 14945146  T
Q  424 ttttcccaata 434  Q
    |||||||||||    
T  14945145 ttttcccaata 14945135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 432
Target Start/End: Original strand, 20441500 - 20441566
Alignment:
Q  366 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 432  Q
    |||||| | ||||||||||||||| |||| |||||||||||  |||| |||||||||||||| ||||    
T  20441500 tgtctcttctttataaactctcattaagaatctcatctatctaatgtgggacttgggttttttccaa 20441566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 418
Target Start/End: Complemental strand, 43972469 - 43972363
Alignment:
Q  312 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||| |||| |  |||||||||  ||||||||||||    
T  43972469 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatctatccgatg 43972370  T
Q  412 taggact 418  Q
    | |||||    
T  43972369 tgggact 43972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 425
Target Start/End: Original strand, 7806413 - 7806497
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttt 425  Q
    |||||||||  ||| |||||||| | |||||||| ||||||| || ||||||||||||| |||||||||||||  ||| |||||||    
T  7806413 acaaaaccggcttgtaaggtgaggagtgtctcctctttataagctatcatcaagagtct-atctatccgatgtgagacctgggttt 7806497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 9758371 - 9758318
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    ||||| ||||||||| | |||||||||| ||||||||||| |||||||||||||    
T  9758371 tgagagttgtctcctctatataaactcttatcaagagtcttatctatccgatgt 9758318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 45427241 - 45427326
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 396  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  45427241 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 45427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 52810660 - 52810721
Alignment:
Q  357 ggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| | |||||||| ||||||||||||  |||||| ||| |||||||||||||||||||    
T  52810660 ggtgaggagtgtctcctctttataaactcttctcaagaatcttatctatccgatgtaggact 52810721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 56509718 - 56509617
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| | ||||||||||  ||| ||| |||| | || ||||| ||||||||||||  ||||| |||  |||||||||||||||||    
T  56509718 aatttggggcctaactcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagggtcctatctatccgatgtagga 56509619  T
Q  417 ct 418  Q
    ||    
T  56509618 ct 56509617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 34205982 - 34206090
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataa-actctcatcaagagtctcatctatccga 409  Q
    ||||| ||||||||  || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||| ||||| ||||||||||| ||||| ||||    
T  34205982 tgttgaaatttgggacctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccga 34206081  T
Q  410 tgtaggact 418  Q
    ||| |||||    
T  34206082 tgtgggact 34206090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 434
Target Start/End: Complemental strand, 39110813 - 39110709
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    ||||| |||||||||| ||  ||| |||||||| |||| ||||| |||| | |||||  |||||| ||| |||||||||||||  |||||| |||||| |    
T  39110813 actcaatcttacaaaatcggcttgtaaggtgaggattgcctcctctttacatactcttctcaagattcttatctatccgatgtgagacttgagttttttc 39110714  T
Q  430 caata 434  Q
    |||||    
T  39110713 caata 39110709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 40197269 - 40197229
Alignment:
Q  365 ttgtctcctttttataaactctcatcaagagtctcatctat 405  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  40197269 ttgtctcctctttataaactcttatcaagagtctcatctat 40197229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 13254498 - 13254391
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||| | ||||||||||||  |||| ||||  |||||||| ||    
T  13254498 tgttgaaatttggggcctaactcatgcttacaaaaccgggttgtaaggtgaggagtgcctcatctttataaactcttctcaatagtcctatctatccaat 13254399  T
Q  411 gtaggact 418  Q
    || |||||    
T  13254398 gtgggact 13254391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 14115524 - 14115579
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| || |||||||||| | |||||||||| ||||||||||| |||||||||||    
T  14115524 aaggtaaggattgtctcctctatataaactcttatcaagagtcttatctatccgat 14115579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 418
Target Start/End: Original strand, 21497680 - 21497779
Alignment:
Q  319 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  21497680 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 21497779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 21498294 - 21498195
Alignment:
Q  319 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  21498294 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 21498195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 21647614 - 21647693
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||| || || ||||| ||||||| |||| ||||||||||  ||||||||||||| |||||||  |||||| |||||    
T  21647614 aaggtgataagtggctcctctttataacctcttatcaagagtcatatctatccgatgtgggacttgaatttttctcaata 21647693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 27048397 - 27048504
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||  || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  27048397 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcttcctatctaaccgat 27048496  T
Q  411 gtaggact 418  Q
    || |||||    
T  27048497 gtgggact 27048504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 34206251 - 34206346
Alignment:
Q  318 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataa-actctcatcaagagtctcatctatccgatgt 412  Q
    |||||||| || |||||| ||||| ||||||  ||| |||||||| | || ||||| ||||||| ||||| ||||||||||| ||||| |||||||    
T  34206251 atttggggcctaactcatccttacgaaaccggcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatctaaccgatgt 34206346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 433
Target Start/End: Complemental strand, 35565174 - 35565072
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| ||||||||||||  ||| |||| ||| |||| ||| |  ||||||||||  ||||||||||  |||||||| | || ||||||||||||||||    
T  35565174 actcatccttacaaaaccggcttgtaaggggaggattgcctc-tcattataaactcatatcaagagtcctatctatccaacgtgggacttgggtttttcc 35565076  T
Q  430 caat 433  Q
    ||||    
T  35565075 caat 35565072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 36558455 - 36558562
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | ||  | || ||||||||||||  |||| ||||  |||||||||||    
T  36558455 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactcttctcaaaagtcatatctatccgat 36558554  T
Q  411 gtaggact 418  Q
    || |||||    
T  36558555 gtgggact 36558562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 53559358 - 53559417
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||| |||||  |||||||| | ||||||||||||| |||||||| ||||||||||||    
T  53559358 tttatatactcttctcaagagttttatctatccgatgtgggacttggttttttcccaata 53559417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 53720703 - 53720782
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| || |||| ||||| || ||||||| | ||||| ||||| ||||||||||||| ||||||  |||||||||||||    
T  53720703 aaggtaaggattgcctcctcttaataaacttttatcaaaagtcttatctatccgatgtgggacttcagtttttcccaata 53720782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 53738197 - 53738304
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || | |||| |||||||||| |  ||| |||||||  | |||||||| ||||||||||||  |||||||||| |||||| | ||    
T  53738197 tgttgaaatttggggcctaagtcatccttacaaaactggcttgtaaggtgacgagtgtctcctctttataaactcttctcaagagtcttatctattctat 53738296  T
Q  411 gtaggact 418  Q
    || |||||    
T  53738297 gtgggact 53738304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 4645940 - 4645866
Alignment:
Q  338 ttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |||||||| ||  ||| |||||||| ||||| |||| |||||| |||||  |||||||||| |||||||||||||    
T  4645940 ttacaaaaacggcttgtaaggtgaggattgtatcctctttatatactcttctcaagagtcttatctatccgatgt 4645866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 6778665 - 6778739
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactc 385  Q
    ||||| |||||| ||||| |||||  ||||||||||||  |||  ||||||| |||||||||| |||||||||||    
T  6778665 tgttgaaatttgaggtctaactcaaccttacaaaaccggcttgtgaggtgaggattgtctcctctttataaactc 6778739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 39910406 - 39910456
Alignment:
Q  312 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgag 362  Q
    ||||||||||||||||| |||||| ||||||||| ||||||  ||||||||    
T  39910406 gttgtaatttggggtctaactcatccttacaaaatcgatttataaggtgag 39910456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 434
Target Start/End: Complemental strand, 5065958 - 5065845
Alignment:
Q  321 tggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttg 420  Q
    |||||||| ||||||  | |||||||||| ||  |||||||| ||||  |||| |||||| | | |  |||||||||| |||||||||||||  ||||||    
T  5065958 tggggtctaactcatcatcacaaaaccgacttataaggtgaggattgcatcctctttatatatttttttcaagagtcttatctatccgatgtgagacttg 5065859  T
Q  421 ggtttttcccaata 434  Q
     |||||| ||||||    
T  5065858 agttttttccaata 5065845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 7198034 - 7198083
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    |||| |||||||||||| ||||||||||| |||||||| |||| ||||||    
T  7198034 tcctctttataaactcttatcaagagtcttatctatccaatgtgggactt 7198083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 21498502 - 21498441
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc 310  Q
    ||||||||| |||||||||||||| |||||||| | |||| ||||||| ||| ||| |||||    
T  21498502 ctctttaggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgatacc 21498441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 9938586 - 9938466
Alignment:
Q  290 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 388  Q
    ||||||| ||| ||| ||||| ||||| ||||| | |||| ||| || |||||||||| || ||  |||||||||| |||||||  |||||||||||| |    
T  9938586 aattcgaaaagctctgataccatgttgaaattttgcgtctaacttatccttacaaaactgacttataaggtgagaagtgtctcccctttataaactctta 9938487  T
Q  389 tcaagagtctcatctatccga 409  Q
    | || | ||| ||||||||||    
T  9938486 taaaaaatcttatctatccga 9938466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 37288913 - 37288965
Alignment:
Q  366 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||||||||||||||||||  |||||| ||  ||||||||||||| |||||    
T  37288913 tgtctcctttttataaactcttctcaagaatcatatctatccgatgtgggact 37288965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 8e-38; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 263 - 434
Target Start/End: Original strand, 39078711 - 39078883
Alignment:
Q  263 tgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtga 361  Q
    |||||||||| |||||||| | | || ||||||||||||||| ||||| ||||||||||||||| || |||||| ||||||||||||  ||| |||||||    
T  39078711 tgcgtgaataggtttaggcggcctttgaattcgataagttctgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtga 39078810  T
Q  362 gaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    | |||| ||||| ||||||||||||  ||||||||||  |||||||||| | |||||||||||||||||||||    
T  39078811 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcccaata 39078883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 250 - 440
Target Start/End: Original strand, 9264427 - 9264618
Alignment:
Q  250 tctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 348  Q
    ||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||||||||||||| || |||||| ||||||||||||    
T  9264427 tctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaaccg 9264526  T
Q  349 atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaagaat 440  Q
      ||| || ||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  9264527 gcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataacgaat 9264618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 250 - 434
Target Start/End: Original strand, 4191049 - 4191234
Alignment:
Q  250 tctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 348  Q
    ||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| | ||| ||||||||| || |||||| ||||||||||||    
T  4191049 tctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatattgaaatttggggcctaactcatccttacaaaaccg 4191148  T
Q  349 atttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
      ||| ||||| || |||||||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  4191149 gcttgtaaggtcaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 4191234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 51642561 - 51642749
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  51642561 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 51642660  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac-ttgggtttttcccaataa 435  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  51642661 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggactttgggtttttcccaataa 51642749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 9264219 - 9264405
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  9264219 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 9264318  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  9264319 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 9264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 37058697 - 37058883
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||| ||| || |||||| |||||||||||    
T  37058697 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattttgggcctaactcatccttacaaaacc 37058796  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    | |||| |||||||| |||  ||||| |||||| |||||  ||||||||||  |||||| ||||| |||||||||||||||||||||    
T  37058797 ggtttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatctgatgtgggacttgggtttttcccaata 37058883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 50692642 - 50692518
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||||||| |||||||||||  |||||||||    
T  50692642 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccga 50692543  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  50692542 tgtgggacttgggtttttcccaata 50692518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 49477649 - 49477528
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    |||||||| |||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  49477649 tgttgtaaattggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 49477550  T
Q  411 gtaggacttgggtttttcccaa 432  Q
    || |||||||||||||||||||    
T  49477549 gtgggacttgggtttttcccaa 49477528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 259 - 434
Target Start/End: Original strand, 22407584 - 22407760
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||||  ||| |||    
T  22407584 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 22407683  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| | || ||||| |||||| |||||  || |||||||  |||||||||||| |||||||| ||||||||||||    
T  22407684 gtgaggagtgcctcctctttatatactcttctcgagagtcttgtctatccgatgtgggacttggatttttcccaata 22407760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 40230628 - 40230752
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||  | |||||  ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  40230628 tgttgaaatttggggcttaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctcatcaagagtctcatctatccgat 40230727  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || | ||||||||||||| ||||||    
T  40230728 gtggaacttgggtttttctcaataa 40230752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 260 - 434
Target Start/End: Complemental strand, 50692486 - 50692315
Alignment:
Q  260 tggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggt 359  Q
    ||||||||||||| |||||||| | |||| ||||||| ||| | |    | ||||| ||||||||| || |||||| ||||||||||||  ||| |||||    
T  50692486 tggtgcgtgaataggtttaggcggcccttgaattcgacaagctttc---catgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 50692390  T
Q  360 gagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  50692389 gaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 9264075 - 9264198
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  9264075 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 9264174  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  9264175 gtgggacttgggtttttcccaata 9264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 249 - 435
Target Start/End: Complemental strand, 37223753 - 37223566
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||| | || |||| | |||||||||||    
T  37223753 ctctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcttccttacaaaacc 37223654  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |  ||| |||||||  |||| ||||| ||||||||||||  ||| |||||| ||||||||||||| |||||| |||||||||||||||    
T  37223653 ggcttgtaaggtgatgattgcctcctctttataaactcttctcaggagtcttatctatccgatgtgggacttaggtttttcccaataa 37223566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 40230424 - 40230546
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||  ||||||||||||  | | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  40230424 tgttgaaatttggggcctaactcaaccttacaaaaccggctcgtaaggtgaggattg-ctcctctttataaactctcatcaagagtctcatctatccgat 40230522  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || | |||||||||||||||||||    
T  40230523 gtggaacttgggtttttcccaata 40230546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 259 - 434
Target Start/End: Original strand, 53640108 - 53640284
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| | ||| ||||| |||  | |||||| |||||| |||||  ||| |||    
T  53640108 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatattgaaatttagggcataactcatccttacataaccggcttgtaag 53640207  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  53640208 gtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 53640284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 22339856 - 22339733
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||||||| ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  22339856 tgttgaaattgggggcctaactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 22339757  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||| ||||||||||||    
T  22339756 gtgggacttggatttttcccaata 22339733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 249 - 427
Target Start/End: Original strand, 39956600 - 39956779
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||  | |||| ||||||| ||| ||| ||||| ||||| ||||||| | || |||||| |||||||||||    
T  39956600 ctctttgggcttggtgcgtgaataggtttaggtggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcatccttacaaaacc 39956699  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||| ||||| ||||||| ||||||    
T  39956700 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatctgatgtgggacttgagttttt 39956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 54495620 - 54495523
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  54495620 cttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 54495523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 4029633 - 4029757
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||||| |||| |||||||  ||||| |||| ||||||||||||  |||||||||| |||||||||||    
T  4029633 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttatctatccgat 4029732  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || |||||||  || ||||||||||    
T  4029733 gtgggacttgcattattcccaataa 4029757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 54591453 - 54591577
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| |||| |||   ||||||||||||  ||||||||||  |||||||||    
T  54591453 ctgttgaaatttggggtctaactcatgcttacaaaaccggcttgtaaggtgaggattgcctcacctttataaactcttctcaagagtcttgtctatccga 54591552  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||| ||||||||||||    
T  54591553 tgtgggacttggatttttcccaata 54591577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 249 - 412
Target Start/End: Original strand, 10758934 - 10759098
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || ||||||||||||||||||||| | |  ||| ||||||||||| | | ||| | ||||| |||||||||||| |||||| |||||||||||    
T  10758934 ctctttgggcttggtgcgtgaataagtttagacggctcttgaattcgataagctatgatatcatgttgaaatttggggtctaactcatccttacaaaacc 10759033  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    || |||  |||||||||||| ||||| |||||| | |||  |||| | ||| |||||||||||||    
T  10759034 gacttgtgaggtgagaattgcctcctatttatatattcttctcaaaaatcttatctatccgatgt 10759098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 25627909 - 25628033
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 409  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| |||||||| |||| ||||| ||||||| |||||  | |||| ||| ||||||||||    
T  25627909 tgttggaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctcttttatatactcttctgaagaatcttatctatccga 25628008  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  25628009 tgtgggacttgggtttttcccaata 25628033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 35011980 - 35011856
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | || ||||| |||||||||||| ||||||||||| |||||  | |    
T  35011980 ctgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaa 35011881  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  35011880 tgtgggacttgggtttttcccaata 35011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 51338449 - 51338553
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||| ||||| ||||||||||||||||    
T  51338449 actcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcc 51338548  T
Q  430 caata 434  Q
    |||||    
T  51338549 caata 51338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 435
Target Start/End: Complemental strand, 35011799 - 35011648
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||| ||   |||||||| | |||||||| ||||||| |    
T  35011799 ccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataatc 35011700  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||| ||||||||||| |||||  | |||| |||||||||||||| |||||||    
T  35011699 tcttatcaagagtcttatctactcaatgtgggacttgggttttttccaataa 35011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 51642417 - 51642540
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||| |     
T  51642417 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccaac 51642516  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || ||||||||||||||| |||||    
T  51642517 gtgggacttgggtttttcgcaata 51642540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 32034162 - 32034081
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| |||||| |||||| |||| || |||||||||||||||    
T  32034162 aaggtgaggattgtctcctttgtataaactcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaataaa 32034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 404
Target Start/End: Complemental strand, 49477505 - 49477349
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| | | ||| | |||||||| |||||| || |||||| |||||||||||    
T  49477505 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctttgatatcatgttgtaaattggggcctaactcatccttacaaaacc 49477406  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatcta 404  Q
    |  ||| |||||||| |||| ||||| |||||||||| |  |||||||||| |||||    
T  49477405 ggcttgtaaggtgaggattgcctcctctttataaacttttctcaagagtcttatcta 49477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 50338370 - 50338494
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||||||||| |||||  ||||||||||||  ||| |||||||  |||||||||| | |||||||||| ||||||||||| ||||||| ||    
T  50338370 ctgttgaaatttggggtctaactcaaccttacaaaaccggcttgtaaggtgaagattgtctcctctatataaactcttatcaagagtcttatctatctga 50338469  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    | |  |||||| ||||||| |||||    
T  50338470 tatgagacttgagtttttctcaata 50338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 434
Target Start/End: Original strand, 53639977 - 53640077
Alignment:
Q  334 attcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 433  Q
    |||||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||| | |||||||| |||||||||||    
T  53639977 attcttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttgtcaagagtcttatctatccgatatgggacttggatttttcccaat 53640076  T
Q  434 a 434  Q
    |    
T  53640077 a 53640077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 33909619 - 33909733
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||| |||||||||||| |||| |||   |||||||||||| ||||||||| | |  |||| |||    
T  33909619 tgttgaaatttggggtctaactcatccttacaaaaccgacttgcaaggtgaggattgcctc--atttataaactcttatcaagagttttagttatctgat 33909716  T
Q  411 gtaggacttgggttttt 427  Q
    || |||||||| |||||    
T  33909717 gtgggacttggattttt 33909733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 35015594 - 35015477
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| |  |||||| ||||||||||||  ||  || ||||| |||| ||||| |||||||||| | ||||||||| | ||||||||||||| |||    
T  35015594 aatttggggccaaactcatacttacaaaaccggcttataaagtgaggattgcctcctctttataaacttttatcaagagttttatctatccgatgtggga 35015495  T
Q  417 cttgggtttttcccaata 434  Q
    ||||| ||||||||||||    
T  35015494 cttggctttttcccaata 35015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 50203846 - 50203947
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||||| |||  |||||||| | || ||||| ||||||||||||  |||||||||| |||||||||||    
T  50203846 tgttgaaatttggggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatctatccgat 50203945  T
Q  411 gt 412  Q
    ||    
T  50203946 gt 50203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 19820517 - 19820632
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||| || || |||||| |||||||||||| |||| |||||||| |||||||||| ||||||||||||  |||||||| | || ||||||||    
T  19820517 tgttgaaatttgaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagttttat-tatccgat 19820615  T
Q  411 gtaggacttgggttttt 427  Q
    || | || |||||||||    
T  19820616 gtggaacatgggttttt 19820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 32215548 - 32215620
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |||||||||  ||| |||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32215548 acaaaaccggcttgtaaggtgaggatggtctcctctttataaactctcatcaagagtctcatctatacgatgt 32215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 10758757 - 10758880
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||| | |||| |||||| ||||||||||||  |||  ||||||| ||||||| || |||||| | |||  |||||||||| |||||||||||    
T  10758757 tgttgaaatttagagtctaactcatccttacaaaaccggcttgtgaggtgagtattgtcttctatttatataatcttctcaagagtcttatctatccgat 10758856  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || ||||||| |||||| ||||||    
T  10758857 gtgggacttgagttttttccaata 10758880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 309 - 424
Target Start/End: Complemental strand, 11414480 - 11414366
Alignment:
Q  309 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 408  Q
    ||||||| |||||| || || |||||| ||||||||||||  ||  |||||||| |||||||||| ||||||||||||  |||||||||| || ||||||    
T  11414480 cctgttgaaatttgaggcctaactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaagagtcttat-tatccg 11414382  T
Q  409 atgtaggacttgggtt 424  Q
    |||| |||| ||||||    
T  11414381 atgtgggacatgggtt 11414366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 434
Target Start/End: Complemental strand, 38422097 - 38421977
Alignment:
Q  312 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||| |||||||||||| |||||  ||||||||| ||  ||| |||||||||| || ||||| |  ||||||||| || || ||||| ||||||||||||    
T  38422097 gttgaaatttggggtctaactcaaccttacaaaatcggcttgtaaggtgagaactgcctcctat--ataaactcttattaatagtcttatctatccgatg 38422000  T
Q  412 taggacttgggtttttcccaata 434  Q
    | |||||| ||||||||||||||    
T  38421999 tgggacttaggtttttcccaata 38421977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 39956456 - 39956579
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || | |||| |||||||||| |  ||| |||||||| |||||||||| ||||||||||||  | |||| |||  |||||| |||    
T  39956456 tgttgaaatttggggcctaattcatccttacaaaactggcttgtaaggtgaggattgtctcctctttataaactcttcttaagattcttgtctatctgat 39956555  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||| ||||||||||||    
T  39956556 gtgggacttggatttttcccaata 39956579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 40926525 - 40926446
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| ||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| || |||||||||||||    
T  40926525 aaggagaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 40926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 43101360 - 43101467
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| |  |||||| ||||||||||||||||| |||||||| | || ||||| ||||||||||||  |||||||||  ||||||| |||    
T  43101360 tgttgaaatttggggccaaactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgat 43101459  T
Q  411 gtaggact 418  Q
    || |||||    
T  43101460 gtgggact 43101467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 420
Target Start/End: Original strand, 44461055 - 44461165
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||| |||  |||||| |||||||||| ||||  ||||||||| | |||||||| |||||||||||| ||||||||| | || || ||||    
T  44461055 ctgttgaaatttggagtccaactcatccttacaaaactgattcacaaggtgaggaatgtctcctctttataaactcttatcaagagtgttatttacccga 44461154  T
Q  410 tgtaggacttg 420  Q
    ||| |||||||    
T  44461155 tgtgggacttg 44461165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 438
Target Start/End: Original strand, 53761432 - 53761514
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaaga 438  Q
    ||||||| | || ||||| |||||||||||| |||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  53761432 aggtgaggagtgcctcctctttataaactcttatcaagggtcttatctatccgaagtgggacttgggtttttcccagtaaaga 53761514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 42259019 - 42258902
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||| | || |||||| ||| ||||| ||  ||| |||||||| |||| ||||| |||||| |||||  |||||| ||| ||||||||||||| |||    
T  42259019 aatttggagcctaactcatccttgcaaaatcggcttgtaaggtgaggattgcctcctctttatatactcttctcaagaatcttatctatccgatgtggga 42258920  T
Q  417 cttgggtttttcccaata 434  Q
    ||||| ||||||||||||    
T  42258919 cttggatttttcccaata 42258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 44145116 - 44145217
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    |||||||||||| | |||| |||| |||||| | ||  |||||||| |||||||||| |||||||||| | ||||||||||| ||||||| ||||| |||    
T  44145116 aatttggggtctaaatcatccttataaaaccaacttataaggtgagtattgtctcctctttataaactattatcaagagtcttatctatctgatgtggga 44145215  T
Q  417 ct 418  Q
    ||    
T  44145216 ct 44145217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 12800205 - 12800089
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| ||||||  ||| ||||| | ||||||||||||| ||||  ||||||| ||||| | | ||||||||||| ||||||| ||     
T  12800205 tgttgaaatttggggtctaactcatctttataaaacgggtttgcaaggtgaggattgcttccttttaataaatttttatcaagagtcttatctatctgac 12800106  T
Q  411 gtaggacttgggttttt 427  Q
    || ||||||| ||||||    
T  12800105 gtgggacttgagttttt 12800089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 44145403 - 44145506
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||||| |||||  ||  |||||||| | || ||||||||||||| |||| ||||||||||  ||||||||||||| ||| ||||||||||||    
T  44145403 actcatccttacagaaccggcttataaggtgaggagtgcctcctttttataa-ctcttatcaagagtcatatctatccgatgtgggatttgggtttttcc 44145501  T
Q  430 caata 434  Q
    |||||    
T  44145502 caata 44145506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 4256349 - 4256242
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || ||||||||||| |||||||| ||| ||  |||| | |||||||| ||||||||||||  |||||||| | ||| |||||||    
T  4256349 tgttgaaatttggggcctaactcattcttaaaaaaccgacttgtaaaatgaggagtgtctcctctttataaactcttctcaagagtgttatccatccgat 4256250  T
Q  411 gtaggact 418  Q
    || |||||    
T  4256249 gtgggact 4256242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 22407430 - 22407553
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||| |||||  || ||||| |  ||||||||||    
T  22407430 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactcttctcgagagttttgtctatccgat 22407529  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||| | ||||||||||||    
T  22407530 gtgggacttagatttttcccaata 22407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 25578714 - 25578792
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||  |||||||||| | |||||||||| ||||| ||||| ||||||||||||| |||| ||||||||||||||||    
T  25578714 aaggtgaagattgtctcctctatataaactcttatcaa-agtcttatctatccgatgtgggacatgggtttttcccaata 25578792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 26366846 - 26366731
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||| ||   || |||||||| |||| ||| | ||||||||||||  ||||||||||  ||||||||||    
T  26366846 tgttgaaattgggggcctaactcatccttacaaaaacggcatgtaaggtgaggattgcctcatatttataaactcttctcaagagtcttgtctatccgat 26366747  T
Q  411 gtaggacttgggtttt 426  Q
    || |||||||||||||    
T  26366746 gtgggacttgggtttt 26366731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 426
Target Start/End: Original strand, 29763685 - 29763799
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||| |||||| | |||| |||||||||||| ||   ||| || | | |||||||| |||||||||||| ||||||||||| |||||||||||    
T  29763685 tgttgaaatttagggtctaattcatccttacaaaaccggttcataagatggggagtgtctcctctttataaactcttatcaagagtcttatctatccgat 29763784  T
Q  411 gtaggacttgggtttt 426  Q
    || ||| |||||||||    
T  29763785 gtggga-ttgggtttt 29763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 427
Target Start/End: Complemental strand, 34992939 - 34992868
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    ||||||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||    
T  34992939 aggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 35358486 - 35358565
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| ||||||||||||||||| ||| |  |||||||||| ||||||| |||||  ||||||| ||||||||||||    
T  35358486 aaggtgaggattgtctcctttttatatacttttttcaagagtcttatctatctgatgtgagacttggatttttcccaata 35358565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 430
Target Start/End: Complemental strand, 40927097 - 40927026
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccc 430  Q
    |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||| ||||||||    
T  40927097 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttccc 40927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 47702461 - 47702536
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||| ||||| || ||| |||||  |||||||||||||||||||||||| ||||||| |||||||||||||    
T  47702461 tgaggattgcctcctcttcatatactcttctcaagagtctcatctatccgatgtgggacttgtgtttttcccaata 47702536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 26926978 - 26926904
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||| ||||| |||| ||| |||||||    
T  26926978 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggttttttcc 26926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 29369839 - 29369793
Alignment:
Q  388 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  29369839 atcaagagtcttatctatccgatgtgggacttgggtttttcccaata 29369793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 16078852 - 16078949
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 408  Q
    ||||| |||| |||| || |||||  |||| |||||||| |||||||||||  |||| ||||||| |||||||| | ||||||||||| |||||||||    
T  16078852 tgttgaaattgggggcctaactcaaccttaaaaaaccgacttgcaaggtgatgattgcctcctttatataaacttttatcaagagtcttatctatccg 16078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 21832686 - 21832803
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| |||||||||||    |  |||||||| ||||||||||  |||||||||||  ||||||||||  |||||||||||| |||    
T  21832686 aatttggggcctaactcatccttacaaaaccagcatataaggtgaggattgtctcctccttataaactcttctcaagagtcttgtctatccgatgtggga 21832785  T
Q  417 cttgggtttttcccaata 434  Q
    |||| | |||| ||||||    
T  21832786 cttgagatttttccaata 21832803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 39269567 - 39269498
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 428  Q
    |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| ||| ||||||    
T  39269567 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttc 39269498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 435
Target Start/End: Original strand, 42637791 - 42637860
Alignment:
Q  366 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||||||||| |||||||||| ||||||||||| |||||||| |||| |||  || ||||||||||||||    
T  42637791 tgtctcctttatataaactcttatcaagagtcttatctatccaatgtgggatatgagtttttcccaataa 42637860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 5440633 - 5440569
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| ||||||||||||  ||||||||||  |||||||||||| | |||||||||||||||||||    
T  5440633 tcctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 5440569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 34992644 - 34992576
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    |||| |||| ||||| ||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||    
T  34992644 tgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 21832188 - 21832311
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  |||  ||||||| |||| ||| | |||||||||| |  ||||||||||  ||||||||||    
T  21832188 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgaggattgcctcatctttataaacttttctcaagagtcttgtctatccgat 21832287  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    ||  ||||| |||| ||| |||||    
T  21832288 gtgagacttaggttgttctcaata 21832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 40926774 - 40926695
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| ||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| | | ||||| ||||||    
T  40926774 aaggagaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacattgattttttccaata 40926695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 54369154 - 54369047
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||| ||||| || |||||| ||||| |||||| |||| || ||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  54369154 tgttggaatatggggcctaactcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 54369055  T
Q  411 gtaggact 418  Q
    || |||||    
T  54369054 gtgggact 54369047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 26915178 - 26915108
Alignment:
Q  364 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| | |||||||||| ||||||||||| ||||||| ||| | ||||||| |||||| ||||||    
T  26915178 attgtctcctctatataaactcttatcaagagtcttatctatctgatctgggacttgagttttttccaata 26915108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 42604959 - 42604905
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    ||||||||||  ||||||||||||||||||||||||||  ||||||| |||||||    
T  42604959 tttataaacttccatcaagagtctcatctatccgatgtgagacttggatttttcc 42604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 396
Target Start/End: Complemental strand, 44574052 - 44573966
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 396  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  44574052 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 44573966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 21833640 - 21833516
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| ||||| ||||||  ||| | | | || |||| ||||| ||||||||||||  || |||||||  | ||||| |    
T  21833640 ctgttgaaatttggggcctaactcatccttacgaaaccggcttgtaggctaaggattgcctcctctttataaactcttctccagagtcttgtttatccaa 21833541  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| ||||||||||||||| |||||    
T  21833540 tgtgggacttgggtttttctcaata 21833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 24539261 - 24539161
Alignment:
Q  319 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaa-ctctcatcaagagtctcatctatccgatgtaggac 417  Q
    ||||||| || |||||| ||||||||| ||  ||| |||||||| | |||||||| |||| ||| |||| ||||||||||| ||||| | ||||||||||    
T  24539261 tttggggcctaactcatccttacaaaatcggcttgtaaggtgaggagtgtctcctctttacaaaactcttatcaagagtcttatctaactgatgtaggac 24539162  T
Q  418 t 418  Q
    |    
T  24539161 t 24539161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 359 - 435
Target Start/End: Original strand, 39018827 - 39018903
Alignment:
Q  359 tgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||| |||||||||| | |||||||||  ||||||||||| ||||||||||||| ||||    ||||||||||||||    
T  39018827 tgaggattgtctcctctatataaactcctatcaagagtcttatctatccgatgtgggacaaaagtttttcccaataa 39018903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 51836290 - 51836411
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| | ||||||||| |||||| | |||  ||||||| | |||||||| ||||||||  ||||| || | ||||| |||||| ||    
T  51836290 tgttgaaatttggggtctaattcattcttataaaaccaacttgtgaggtgaggagtgtctcctatttataaa--ctcataaaaaatctcaactatccaat 51836387  T
Q  411 gtaggacttgggtttttcccaata 434  Q
     | ||| || ||||||||||||||    
T  51836388 atgggatttaggtttttcccaata 51836411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 3985880 - 3985781
Alignment:
Q  319 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | ||  |||| ||||||||||||  |||| ||||  ||||||||||||| |||||    
T  3985880 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactcttctcaaaagtcatatctatccgatgtgggact 3985781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 21750590 - 21750483
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| |||||||||||| ||||||  ||  ||||| |||||    
T  21750590 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaaccgat 21750491  T
Q  411 gtaggact 418  Q
    || |||||    
T  21750490 gtgggact 21750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 34715444 - 34715551
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||| |||   |||||||||||    
T  34715444 tgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaaagtgctatctatccgat 34715543  T
Q  411 gtaggact 418  Q
    || |||||    
T  34715544 gtgggact 34715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 432
Target Start/End: Complemental strand, 42311270 - 42311207
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 432  Q
    ||||| |||||||||| | |||| || ||  ||||||||||||| |||||||||||||||||||    
T  42311270 ctcctctttataaacttttatcaggattcctatctatccgatgtgggacttgggtttttcccaa 42311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 44573754 - 44573679
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 386  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||    
T  44573754 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 44573679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 46139341 - 46139246
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |||||||||||| |||||||||||||||||    ||| || |||||| ||||| ||| |||||||||| |  |||||||| | |||||||| ||||    
T  46139341 aatttggggtctaactcattcttacaaaactagcttgtaaagtgagatttgtcccctctttataaacttttctcaagagtgttatctatccaatgt 46139246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 13769286 - 13769387
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| |||| |||    
T  13769286 aatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtggga 13769385  T
Q  417 ct 418  Q
    ||    
T  13769386 ct 13769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 418
Target Start/End: Complemental strand, 27219418 - 27219337
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||||    
T  27219418 cttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggact 27219337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 37040016 - 37040073
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    ||||||||||||||||||| | ||| |||||| ||||||||||| |||| | ||||||    
T  37040016 aaggtgagaattgtctcctctatattaactcttatcaagagtcttatcttttcgatgt 37040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 418
Target Start/End: Original strand, 14170007 - 14170095
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||| |||  |||||||| | || |||||||||| |||||    
T  14170007 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaaatcttctcaagagtgttatttatccgatgtgggact 14170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 44573422 - 44573334
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| | |||||| | || ||||| ||||||||||||  ||||||||   ||||||||||||| |||||    
T  44573422 actcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggact 44573334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 3435412 - 3435599
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||||||||||||| || |||||| |||||||||||    
T  3435412 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaacc 3435511  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    | |||| |||||||| |||| ||||| | ||||||||||  |||||||||| ||||||||||||| |||||||  ||||| |||||||    
T  3435512 ggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatctatccgatgtgggacttgaattttttccaataa 3435599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 249 - 435
Target Start/End: Complemental strand, 12432076 - 12431889
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || ||||||| |||||| |||||||| | |||| |||| || ||| | | ||||| ||||| ||||||||| ||  ||||| |||||||||||    
T  12432076 ctctttgggcttggtgcatgaataggtttaggcggcccttgaatttgacaagctttgataccatgttgaaatttggggcctagctcatccttacaaaacc 12431977  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |  ||| |||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12431976 ggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12431889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 33985901 - 33986087
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||| ||||| |  |||| | |||||||||||    
T  33985901 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatctggggcccaactcttccttacaaaacc 33986000  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  33986001 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggagttgggtttttcccaata 33986087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 259 - 434
Target Start/End: Complemental strand, 29684179 - 29684003
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    ||||||||||||||||||||||  |||||| ||||||| ||| ||| ||||| | ||| |||||||| ||| ||| || ||||||||||||  ||| |||    
T  29684179 ttggtgcgtgaataagtttaggtggtccttgaattcgacaagctctgataccatattgaaatttgggttctaacttatccttacaaaaccggcttgtaag 29684080  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| |||| ||||| |||||| |||||  ||||||||||  |||||| ||||  |||||||||||||||||||||    
T  29684079 gtgaggattgcctcctctttatatactcttctcaagagtcttgtctatctgatgcgggacttgggtttttcccaata 29684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 17727513 - 17727396
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| || || ||||||||||||  |||||||||| ||||||||||||| |||    
T  17727513 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtggga 17727414  T
Q  417 cttgggtttttcccaata 434  Q
    ||||||||||||||||||    
T  17727413 cttgggtttttcccaata 17727396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 20998977 - 20999102
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||    
T  20998977 ctgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccga 20999076  T
Q  410 tgtaggacttgggtttttcccaataa 435  Q
    ||| ||||||||||||||||||||||    
T  20999077 tgtgggacttgggtttttcccaataa 20999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 883609 - 883713
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||    
T  883609 actcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcc 883708  T
Q  430 caata 434  Q
    |||||    
T  883709 caata 883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 247 - 427
Target Start/End: Complemental strand, 29101931 - 29101749
Alignment:
Q  247 cgctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaa 345  Q
    |||||||||||||||||||||||||| |||||||| | | || |||| |||||| ||| ||||| ||||| |||||| || || |||||| |||| ||||    
T  29101931 cgctctttaggtttggtgcgtgaataggtttaggcggcctttgaatttgataaggtctgataccatgttgaaatttgaggcctaactcatccttataaaa 29101832  T
Q  346 ccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    |||  |||  |||| || |||||||||| |||||||||||||  ||||| ||||  |||||||||||| ||||||| ||||||    
T  29101831 ccggcttgtgaggtaaggattgtctcctcttttataaactcttctcaagtgtcttgtctatccgatgtgggacttgagttttt 29101749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 884146 - 884049
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  884146 cttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggacttgggtttttcccaata 884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 309 - 434
Target Start/End: Complemental strand, 32667300 - 32667175
Alignment:
Q  309 cctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccg 408  Q
    ||||||| ||||||||| || |||||| ||||||||||||  ||| ||||| || |||| ||||| | |||||||||| ||||||||||| ||||||| |    
T  32667300 cctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaactcttatcaagagtcttatctatctg 32667201  T
Q  409 atgtaggacttgggtttttcccaata 434  Q
    |||| |||||| ||||||||||||||    
T  32667200 atgtgggacttcggtttttcccaata 32667175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 16007093 - 16006969
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| | |||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||  ||||||||||  |||||||||    
T  16007093 ctgttgaactttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatccga 16006994  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||||||||||    
T  16006993 tgtgggacttgggtttttcccaata 16006969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 27545117 - 27545228
Alignment:
Q  323 gggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 422  Q
    |||||| |||||| |||||||||||| |||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||| |||     
T  27545117 gggtctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacatgga 27545216  T
Q  423 tttttcccaata 434  Q
    ||||| ||||||    
T  27545217 ttttttccaata 27545228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 34775472 - 34775349
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||||| |||  ||||||||||  ||||||||||    
T  34775472 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgat 34775373  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  34775372 gtgggacttgggtttttcccaata 34775349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 249 - 429
Target Start/End: Complemental strand, 884028 - 883847
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| | | ||||| ||||  |||| |||| || |||||| |||||||||||    
T  884028 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctttgataccatgttaaaattgggggcctaactcatccttacaaaacc 883929  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |  ||| |||||||| |||| |||   ||||||||||||  ||||||||||  |||||||||| | ||||||||||||||||    
T  883928 ggcttgtaaggtgaggattgcctctcctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcc 883847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 33985759 - 33985881
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||  ||||  |||||||||| ||||||||||    
T  33985759 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata--ctcttctcaagagtcttatctatccga 33985856  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||||||||||| ||||||    
T  33985857 tgtgggacttgggtttttgccaata 33985881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 12432220 - 12432097
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||  || |||||| |||| |||||| ||||| |||||||| |||| ||||| ||||||||||||  |||||| ||| |||||||||||    
T  12432220 tgttgaaatttgggacctaactcatccttaaaaaaccaatttgtaaggtgaggattgcctcctctttataaactcttctcaagattcttatctatccgat 12432121  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||| ||||| ||||||    
T  12432120 gtgggacttggattttttccaata 12432097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 25621274 - 25621397
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||||||||||||  ||| ||||||||  |||| |||| |||||| |||||  |||||||||| |||||||||||    
T  25621274 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgagggttgtttcctctttatatactcttctcaagagtcttatctatccgat 25621373  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    ||  ||||||||||||||||||||    
T  25621374 gtgagacttgggtttttcccaata 25621397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 31761247 - 31761124
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||| | ||| |||||||| |||| ||| | | ||||||||||  |||| ||||| |||||||||||    
T  31761247 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcttctatataaactcttctcaaaagtcttatctatccgat 31761148  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||| ||||||||||||||    
T  31761147 gtgggacttaggtttttcccaata 31761124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 332 - 434
Target Start/End: Complemental strand, 19860131 - 19860029
Alignment:
Q  332 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttccca 431  Q
    |||| ||||||||||||  ||| |||||| | |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||||    
T  19860131 tcatccttacaaaaccggcttgtaaggtgtggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttccca 19860032  T
Q  432 ata 434  Q
    |||    
T  19860031 ata 19860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 6183355 - 6183456
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||||| |||||||| ||||||||||||  ||||||||   |||||||||||    
T  6183355 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatctatccgat 6183454  T
Q  411 gt 412  Q
    ||    
T  6183455 gt 6183456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 39386766 - 39386661
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||||||||||  ||   |||||||| |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  39386766 actcatccttacaaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcc 39386667  T
Q  430 caataa 435  Q
    ||||||    
T  39386666 caataa 39386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 32667085 - 32666969
Alignment:
Q  318 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggac 417  Q
    |||||||| || ||||||  |||||||||||  ||| ||||| ||||||| ||||| | |||||||||| ||||||||||| || ||||| |||  ||||    
T  32667085 atttggggcctaactcatcattacaaaaccggcttgtaaggtaagaattgcctcctctatataaactcttatcaagagtcttatttatccaatgagggac 32666986  T
Q  418 ttgggtttttcccaata 434  Q
    |||||||||||||||||    
T  32666985 ttgggtttttcccaata 32666969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 6986449 - 6986528
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||    
T  6986449 aaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 6986528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 368 - 435
Target Start/End: Complemental strand, 12419896 - 12419829
Alignment:
Q  368 tctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||||| ||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12419896 tctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12419829  T

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Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 40010089 - 40009966
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || || ||| ||||||||||||  ||| |||||||| |||| ||||| ||| ||  ||||  |||||||| | |||||||||||    
T  40010089 tgttgaaatttggggcctaacacatccttacaaaaccggcttgtaaggtgaggattgcctcctctttctatgctcttctcaagagttttatctatccgat 40009990  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  40009989 gtgggacttgggtttttcccaata 40009966  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 29695373 - 29695451
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||| ||||||| || ||||||||||||  |||||||||| |||||||||||||  ||||||||||||||||||||    
T  29695373 aggtgaggattgtctactctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 29695451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 330 - 435
Target Start/End: Original strand, 7257616 - 7257721
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| ||||||||||||| ||| |||||||| ||||  |||| |||||||||| |  |||||||||| ||||||||||| | |||||| | |||||||    
T  7257616 actcatccttacaaaaccgacttgtaaggtgaggattgcatcctctttataaactattctcaagagtcttatctatccgatatgggacttagatttttcc 7257715  T
Q  430 caataa 435  Q
    ||||||    
T  7257716 caataa 7257721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 8044534 - 8044658
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcct-ttttataaactctcatcaagagtctcatctatccga 409  Q
    ||||| ||||||||  || |||||| |||||||||| | ||   |||||||| | || ||||| ||||||||||||| ||||||||||| ||||||| ||    
T  8044534 tgttgaaatttgggacctaactcatccttacaaaactggttcataaggtgaggagtgcctcctcttttataaactcttatcaagagtcttatctatctga 8044633  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||  |||||||||||||||||||||    
T  8044634 tgcgggacttgggtttttcccaata 8044658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 3976460 - 3976567
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| | | |||||||||||    
T  3976460 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatattatctatccgat 3976559  T
Q  411 gtaggact 418  Q
    || |||||    
T  3976560 gtgggact 3976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 364 - 435
Target Start/End: Complemental strand, 19859987 - 19859916
Alignment:
Q  364 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||||||||    
T  19859987 attgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 19859916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 29676383 - 29676286
Alignment:
Q  337 cttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||| ||   |||||||| |||| ||||| | |||||||||| ||||||||||| |||||||||||||  ||| || |||||||||||||    
T  29676383 cttacaaaaccggttcttaaggtgaggattgactcctatatataaactcttatcaagagtcttatctatccgatgtgagacatgtgtttttcccaata 29676286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 18901852 - 18901960
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| ||  |||||||||||||||| |  ||| |||||||  | || ||||| ||||||||||||  |||||||||| ||||||||||    
T  18901852 ctgttgaaatttggggcctatctcattcttacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactcttttcaagagtcttatctatccga 18901951  T
Q  410 tgtaggact 418  Q
    ||| |||||    
T  18901952 tgtgggact 18901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 10571021 - 10570927
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||  ||| |||||||  |||| ||||  |||||| |||||  |||||||||| ||||||| ||||| |||||||||||||||||||||    
T  10571021 acaaaaccggcttgtaaggtgaagattgcctccactttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 10570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 26847276 - 26847349
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||||||| |||||| | |||||||||||| ||||||||||  |||||||| |||| ||||||||||||||||    
T  26847276 aaggtgagaagtgtctc-tctttataaactcttatcaagagtcctatctatccaatgtgggacttgggtttttcc 26847349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 4721846 - 4721911
Alignment:
Q  364 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||| ||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  4721846 attgcctcctctatataaactcttatcaagagtctaatctatccgatgtgggacatgggtttttcc 4721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 10429848 - 10429772
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    |||||||||||| |||||| ||||||||||||  ||| ||| |||| | |||||||| |||||||||||| ||||||    
T  10429848 aatttggggtctaactcatccttacaaaaccggcttgtaagatgaggagtgtctcctctttataaactcttatcaag 10429772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 10536925 - 10537005
Alignment:
Q  318 atttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 398  Q
    |||||||| || |||||| ||| |||||||| ||   |||||||||| || |||||| |||||||||||||||||||||||    
T  10536925 atttggggcctaactcatccttgcaaaaccggttcataaggtgagaagtgcctccttcttataaactctcatcaagagtct 10537005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 10542071 - 10542175
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||||||||||   ||| ||| |||| | |||||||| |||||||||||| |||||||||   |||||||  |||| ||||||| ||||||||    
T  10542071 actcatccttacaaaaccagcttgtaagatgaggagtgtctcctctttataaactcttatcaagagttcaatctatctaatgtgggacttgagtttttcc 10542170  T
Q  430 caata 434  Q
    |||||    
T  10542171 caata 10542175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 22447361 - 22447297
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||| ||||||| ||||| ||||| |||||| | ||||||||||||||||||||||||||    
T  22447361 tcctctttaaaaactcttatcaaaagtcttatctattcaatgtaggacttgggtttttcccaata 22447297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 405
Target Start/End: Original strand, 33277548 - 33277636
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctat 405  Q
    |||||||||||| ||||||  ||||||||| || ||| ||||||||||||| ||| |||||||||||| | ||||| | ||| ||||||    
T  33277548 aatttggggtctaactcatctttacaaaactgacttgtaaggtgagaattgactcatttttataaacttttatcaataatcttatctat 33277636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 42768323 - 42768428
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||  | |||||||||||    
T  42768323 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagag--ttatctatccgat 42768420  T
Q  411 gtaggact 418  Q
    || |||||    
T  42768421 gtgggact 42768428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 3976992 - 3977099
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || |||||| ||||||||||||  ||| ||  |||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  3976992 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatctatccgat 3977091  T
Q  411 gtaggact 418  Q
    || |||||    
T  3977092 gtgggact 3977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 15820100 - 15820151
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtga 361  Q
    |||||| |||||||||||| |||||||||||||||||||| ||| |||||||    
T  15820100 ctgttgaaatttggggtctaactcattcttacaaaaccgacttgtaaggtga 15820151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 23054441 - 23054334
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  23054441 tgttgaaatttggggcctaactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttatatctatctgat 23054342  T
Q  411 gtaggact 418  Q
    || |||||    
T  23054341 gtgggact 23054334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 43195899 - 43195792
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  43195899 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgat 43195800  T
Q  411 gtaggact 418  Q
    || |||||    
T  43195799 gtgggact 43195792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 418
Target Start/End: Complemental strand, 7877938 - 7877852
Alignment:
Q  332 tcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||| ||||||||||||  ||| |||||||| | |||||||| ||||||||||||  || |||||   |||||||||||||||||||    
T  7877938 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcgagagtgctatctatccgatgtaggact 7877852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 10849486 - 10849564
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagag 395  Q
    ||||||||| || |||||| ||||||||||| | ||| |||||||| | || ||||| |||||||||||| ||||||||    
T  10849486 aatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaactcttatcaagag 10849564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 434
Target Start/End: Complemental strand, 29684333 - 29684211
Alignment:
Q  312 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||| |||||| || || ||||||||||| |||| || |||| |||||||| |||| ||||| |||||| |||||  |||||||| |  ||||  |||||    
T  29684333 gttgaaatttgaggcctaactcattcttataaaatcgttttgtaaggtgaggattgcctcctctttatatactcttctcaagagttttgtctaatcgatg 29684234  T
Q  412 taggacttgggtttttcccaata 434  Q
      | |||||||||||||||||||    
T  29684233 cggaacttgggtttttcccaata 29684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 39108230 - 39108080
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| || ||| || ||||||||| ||||||||| ||  ||| |||||||  |||  ||||| | |||||||    
T  39108230 ccttgaattcgacaagctctgataccatgttgaaacttgaggcctgactcatccttacaaaatcggattgtaaggtgatgattacctcctctatataaac 39108131  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||| ||||||| ||| || |||| ||||| |||||||  ||||||||||||    
T  39108130 tcttatcaagattcttatatatctgatgtgggacttgaatttttcccaata 39108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 14127240 - 14127301
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataaa 436  Q
    |||||||| ||| ||||||||||| || |||| ||||| |||||| ||||||||||||||||    
T  14127240 tttataaattcttatcaagagtcttatttatctgatgtgggacttcggtttttcccaataaa 14127301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 435
Target Start/End: Original strand, 18607273 - 18607366
Alignment:
Q  342 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||||||| || | ||||||||||||  ||||| |||||| |||||  | ||||||||  ||||||||||||  |||||| ||||||||||||||    
T  18607273 aaaaccggttcgtaaggtgagaattacctcctctttatatactcttcttaagagtcttgtctatccgatgtgagacttgtgtttttcccaataa 18607366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 21214190 - 21214275
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 396  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  21214190 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 21214275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 21734473 - 21734408
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||| |||||| |||||  |||||||||| ||||||||||||| |||  ||||||||||||||||    
T  21734473 ctcctctttatatactcttctcaagagtcttatctatccgatgtgggatgtgggtttttcccaata 21734408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 10485278 - 10485222
Alignment:
Q  342 aaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 398  Q
    ||||||| || | |||||||| |||||||||| | ||||||||||||||||||||||    
T  10485278 aaaaccggttcgtaaggtgaggattgtctcctctatataaactctcatcaagagtct 10485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 340
Target Start/End: Original strand, 29695471 - 29695563
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattctta 340  Q
    |||||| || |||||||||||||| |||||||||| |||| ||||||| ||| ||| ||||| ||||  ||||||||| || |||||| ||||    
T  29695471 ctctttgggcttggtgcgtgaataggtttaggcagcccttgaattcgacaagctctgataccatgttaaaatttggggcctaactcatcctta 29695563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 39108470 - 39108398
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    ||||| ||| |||||||| |||||| |||||||||||| |||  |||||||| |||||||||| | |||||||    
T  39108470 tgttgaaatatggggtctaactcatccttacaaaaccggtttataaggtgaggattgtctcctctatataaac 39108398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 418
Target Start/End: Original strand, 25286257 - 25286356
Alignment:
Q  319 tttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    ||||||| || |||||| ||||||||||||  ||| |||||||| | ||| |||| |||||||||||| ||||||  ||  ||||| ||||||| |||||    
T  25286257 tttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtttcctctttataaactctgatcaagcttccaatctaaccgatgtgggact 25286356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 434
Target Start/End: Complemental strand, 28895629 - 28895519
Alignment:
Q  323 gggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 422  Q
    |||||| |||||| ||||||||||||  ||| |||||||| | ||||| ||||||||||||||| ||| |||| |  |||| | | |||| ||| |||||    
T  28895629 gggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgtct-ctttttataaactcttatctagagccctatcttttcaatgtgggatttggg 28895531  T
Q  423 tttttcccaata 434  Q
    ||||| ||||||    
T  28895530 ttttttccaata 28895519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 32810894 - 32810965
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||||||||  ||| |||||||  |||||||||| |||||||||||| ||||||| ||  ||||||||||||    
T  32810894 acaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaagaatcctatctatccgatg 32810965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 43169361 - 43169250
Alignment:
Q  307 tacctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatc 406  Q
    ||||||||| ||| ||||| || |||| | |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||    
T  43169361 tacctgttgaaatatggggcctaactcttccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatc 43169262  T
Q  407 cgatgtaggact 418  Q
    |||||| |||||    
T  43169261 cgatgtgggact 43169250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 10485216 - 10485170
Alignment:
Q  388 atcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||| ||||||||||||| |||| ||| ||||||||||||    
T  10485216 atcaagagtcttatctatccgatgtgggacatggatttttcccaata 10485170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 426
Target Start/End: Original strand, 17265009 - 17265079
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 426  Q
    ||||||| |||| ||||| | |||||||| | | ||||||||| ||||||||||||| |||| ||||||||    
T  17265009 aggtgaggattgcctcctctatataaacttttaccaagagtcttatctatccgatgtgggacatgggtttt 17265079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 37812272 - 37812330
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtc 369  Q
    |||||||||||||||||| |||||| ||||||||| ||| |||  ||||||| ||||||    
T  37812272 tgttgtaatttggggtctaactcatccttacaaaatcgacttgtgaggtgaggattgtc 37812330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 426
Target Start/End: Original strand, 38760315 - 38760421
Alignment:
Q  320 ttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggactt 419  Q
    |||||| || ||||||  |||||||||||  ||| |||||||  | || ||||| |||||||||||| ||||||||||  ||||| | ||||  ||||||    
T  38760315 ttggggcctaactcatcgttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactcttatcaagagtcctatctacctgatgcgggactt 38760414  T
Q  420 gggtttt 426  Q
    |||||||    
T  38760415 gggtttt 38760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 39108335 - 39108277
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtc 369  Q
    ||||| || |||||||||||||||| ||||||||||||  ||| |||||||| ||||||    
T  39108335 tgttgaaacttggggtctgactcatccttacaaaaccggcttgtaaggtgaggattgtc 39108277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 11969161 - 11969060
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||| ||| || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||| || |||    
T  11969161 aattttgggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgacgtggga 11969062  T
Q  417 ct 418  Q
    ||    
T  11969061 ct 11969060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 5424770 - 5424822
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgag 362  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||| ||||||||    
T  5424770 ctgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgag 5424822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 6986428 - 6986376
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatcc 407  Q
    |||||||| |||||||||| |||||||||||   |||||||||| ||||||||    
T  6986428 aaggtgaggattgtctcctctttataaactcctctcaagagtcttatctatcc 6986376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 384
Target Start/End: Original strand, 7257088 - 7257200
Alignment:
Q  274 gtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctga-ctcattcttacaaaaccgatttgcaaggtgagaattgtctc 371  Q
    |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || | ||||| ||||||||||||||||| ||| |||| ||||  ||    
T  7257088 gtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaaactcatccttacaaaaccgatttgtaagatgaggattgcatc 7257187  T
Q  372 ctttttataaact 384  Q
    || ||||||||||    
T  7257188 ctctttataaact 7257200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 13839247 - 13839371
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| |||||| ||||| |||| |  | |||||||||  ||| |||||||| |||| ||| | |||| |||||||  ||||||||||  |||||||||    
T  13839247 ctgttgaaatttgaggtctaactcgtcatcacaaaaccggattgtaaggtgaggattgcctcatctttagaaactcttctcaagagtcttgtctatccga 13839346  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    |||   ||||| |||||||| ||||    
T  13839347 tgtgaaacttgagtttttccaaata 13839371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 418
Target Start/End: Original strand, 21213893 - 21213981
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||| |||| |||||    
T  21213893 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccaatgtgggact 21213981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 22447222 - 22447178
Alignment:
Q  304 taatacctgttgtaatttggggtctgactcattcttacaaaaccg 348  Q
    |||||| ||||| |||||||||||| |||||| ||||||||||||    
T  22447222 taatacatgttgaaatttggggtctaactcatccttacaaaaccg 22447178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 29273151 - 29273337
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  29273151 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 29273250  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||  ||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||    
T  29273251 ggcttgtaaggtgaggattgcctcccctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 29273337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 39649010 - 39649196
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| |||| || ||| ||| |||   ||||| |||||||||  | |||||| |||||||||||    
T  39649010 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaatttgacaagctctgatattatgttgaaatttggggcataactcatccttacaaaacc 39649109  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||    
T  39649110 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 39649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 259 - 426
Target Start/End: Original strand, 43361693 - 43361861
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaag 357  Q
    |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||  |||||| |||||| ||||||||||||  ||| |||    
T  43361693 ttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattgagggtctaactcatccttacaaaaccggcttgtaag 43361792  T
Q  358 gtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttt 426  Q
    ||||| ||||  |||| ||||||||||||  ||||||||||  |||||||||||| |||||||||||||    
T  43361793 gtgaggattgcttcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttt 43361861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 1234041 - 1233918
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| ||||||  | ||||||||   |||  ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  1234041 tgttgaaatttggggtctaactcatcatcacaaaaccagcttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgat 1233942  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||| ||||||    
T  1233941 gtgggacttgggtttttaccaata 1233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 311 - 429
Target Start/End: Original strand, 41812647 - 41812765
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||| |||||| |||||| || |||||||||| ||| || ||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||    
T  41812647 tgttgaaatttcgggtctaactcatcctcacaaaaccgacttgtaaagtgagaagtgtctcctctttataaactctcatcaagagtctcatttatccaat 41812746  T
Q  411 gtaggacttgggtttttcc 429  Q
    ||  |||||||||||||||    
T  41812747 gtgagacttgggtttttcc 41812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 249 - 412
Target Start/End: Complemental strand, 15391997 - 15391833
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| ||||||||||     
T  15391997 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggccttactcatccttacaaaact 15391898  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||||    
T  15391897 ggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgt 15391833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 249 - 435
Target Start/End: Original strand, 21428192 - 21428380
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagttt-aggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaac 346  Q
    |||||| || |||||||||||||| |||| | || | |||| ||||||| ||| ||||||||| ||||| ||||||||| || |||||| || |||| ||    
T  21428192 ctctttgggcttggtgcgtgaatatgttttaagcggcccttgaattcgacaagctctaataccatgttgaaatttggggcctaactcatcctcacaatac 21428291  T
Q  347 cgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||| ||| ||||| || |||||||||| | |||||||||| ||||||| ||| |||| || ||||||| |||||| |||||||||||||    
T  21428292 cgacttgtaaggtaaggattgtctcctctgtataaactcttatcaagaatcttatctttctgatgtagaacttggctttttcccaataa 21428380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 52846838 - 52846961
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| |||| ||||| |||||| |||||  |||||||||| |||||||||||    
T  52846838 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgat 52846937  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  52846938 gtgggacttgggtttttcccaata 52846961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 311 - 437
Target Start/End: Complemental strand, 5222809 - 5222683
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||| |||||| |||||| |||| |||||||  ||| |||||||| |||||||||| |  ||||||||| ||||||||||| ||||||| |||    
T  5222809 tgttgaaatttagggtctaactcatccttataaaaccggcttgtaaggtgaggattgtctcctctacataaactcttatcaagagtcttatctatcagat 5222710  T
Q  411 gtaggacttgggtttttcccaataaag 437  Q
    || |||||| |||||||||||||||||    
T  5222709 gtgggacttaggtttttcccaataaag 5222683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 312 - 434
Target Start/End: Complemental strand, 15392139 - 15392017
Alignment:
Q  312 gttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||| ||||||||| || |||||| ||||||||||||  ||| || ||||| |||| ||||| |||||| |||||  |||||||||| ||||||||||||    
T  15392139 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatg 15392040  T
Q  412 taggacttgggtttttcccaata 434  Q
    | |||||||||||||||||||||    
T  15392039 tgggacttgggtttttcccaata 15392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 21428047 - 21428170
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||| || || |||||| || ||||||||| |||| ||||| || |||||| ||||| |||||||||| ||||||||||| |||||||| ||    
T  21428047 tgttgaaatttgagggctaactcatcctcacaaaaccggtttgtaaggtaaggattgtcacctttatataaactcttatcaagagtcttatctatccaat 21428146  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    ||||||||||  ||||||||||||    
T  21428147 gtaggacttgaatttttcccaata 21428170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 311 - 426
Target Start/End: Original strand, 43361541 - 43361656
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| ||||||| |||||| ||||||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  43361541 tgttgaaattgggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 43361640  T
Q  411 gtaggacttgggtttt 426  Q
    || |||||||||||||    
T  43361641 gtgggacttgggtttt 43361656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 22892683 - 22892800
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || |||||| ||||||||||||  |||  ||| ||| | |||||||| |||||||| |||||||||||||||||| |||  ||||| |||    
T  22892683 aatttggggcctaactcatccttacaaaaccggcttgtgaggcgaggagtgtctcctctttataaagtctcatcaagagtctcatttatttgatgtggga 22892782  T
Q  417 cttgggtttttcccaata 434  Q
    ||||||||||||||||||    
T  22892783 cttgggtttttcccaata 22892800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 24382349 - 24382472
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || | ||||  | |||||||||| |||  || |||| | || ||||| ||||||||||||||||||||||||||| ||||||||    
T  24382349 tgttgaaatttggggcctaattcatcatcacaaaaccgacttgtgagatgaggagtgcctcctctttataaactctcatcaagagtctcatttatccgat 24382448  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || ||| |||||||||||||||||    
T  24382449 gttggatttgggtttttcccaata 24382472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 48558310 - 48558433
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||  | |||||| ||||||||||||  ||| |||||||| ||||  |||| |||||| |||||  |||||||||| |||||||||||    
T  48558310 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttatatactcttctcaagagtcttatctatccgat 48558409  T
Q  411 gtaggacttgggtttttcccaata 434  Q
     | |||||||||||||||||||||    
T  48558410 atgggacttgggtttttcccaata 48558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 285 - 434
Target Start/End: Original strand, 38871117 - 38871267
Alignment:
Q  285 ccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaac 383  Q
    |||| ||||||| ||| ||| ||||| ||||| |||||| || || || ||| |||||||||||| ||   |||||||| | || ||||| |||||||||    
T  38871117 ccttgaattcgacaagctctgataccatgttgaaatttgaggcctaacgcatccttacaaaaccggttcttaaggtgaggagtgcctcctctttataaac 38871216  T
Q  384 tctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    | | ||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  38871217 ttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaata 38871267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 2997044 - 2997168
Alignment:
Q  310 ctgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccga 409  Q
    |||||| ||||||||| || |||||| ||||||||||||  |||  ||||||| |||  ||||| |||||| |||||  |||||||| | ||||||||||    
T  2997044 ctgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggtgagtattacctcctctttatatactcttctcaagagttttatctatccga 2997143  T
Q  410 tgtaggacttgggtttttcccaata 434  Q
    ||| |||||| ||||||||||||||    
T  2997144 tgtgggacttaggtttttcccaata 2997168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 13959517 - 13959393
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||| ||||||   ||| ||||||| |||||| |||| ||||||||||||  |||||||||| |||||||||||    
T  13959517 tgttgaaatttggggcctaactcatccttaaaaaaccagcttgtaaggtgaaaattgtatcctctttataaactcttctcaagagtcttatctatccgat 13959418  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    ||  |||||| ||| ||||||||||    
T  13959417 gtgagacttgcgttattcccaataa 13959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 29413419 - 29413340
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| | || ||||| |||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  29413419 aaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctacccgaagtaggacttgggtttttcccaata 29413340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 52921500 - 52921579
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| | || |||||||||||||||||||| |||||||   ||||||||||||| |||||||||||||||||||||    
T  52921500 aaggtgaggaatgcctcctttttataaactctcaccaagagtactatctatccgatgtgggacttgggtttttcccaata 52921579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 21538929 - 21539046
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||||||| || | |||| |||||||||||| |||| |||||||| |||| ||||| |||||||| |||  |||||||||| || |||||||| | |||    
T  21538929 aatttggggcctaaatcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttatttatccgatatggga 21539028  T
Q  417 cttgggtttttcccaata 434  Q
    | ||| ||||||||||||    
T  21539029 catggatttttcccaata 21539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 317 - 426
Target Start/End: Original strand, 33342273 - 33342382
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtagga 416  Q
    ||||| |||||| |||||| ||||||||||||  ||| ||||||||  ||  ||||| |||||| |||||  |||||||||||||||||| ||||| |||    
T  33342273 aatttagggtctaactcatccttacaaaaccggcttgtaaggtgaggtttacctcctctttatatactcttctcaagagtctcatctatctgatgtggga 33342372  T
Q  417 cttgggtttt 426  Q
    ||||||||||    
T  33342373 cttgggtttt 33342382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 11018969 - 11018845
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||| ||||| |||||| ||||||||| |||||||  ||| ||  |||||||||| ||||||||||||  |||||||||| |  |||| |||    
T  11018969 tgttgaaatttgaggtctaactcatccttacaaaatcgatttgtgaggggaagattgtctcctctttataaactcttctcaagagtcttagttatctgat 11018870  T
Q  411 gtaggacttgggtttttcccaataa 435  Q
    || |||||||  |||||||||||||    
T  11018869 gtgggacttgaatttttcccaataa 11018845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 22826778 - 22826850
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    |||||||| |||||||||| | |||||||||| ||||||||||| ||||||||||||| |||| |||||||||    
T  22826778 aaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttt 22826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 434
Target Start/End: Original strand, 39648906 - 39648989
Alignment:
Q  350 tttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||| |||||| |||||||||||||||||||||    
T  39648906 tttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctat-cgatgtgggacttgggtttttcccaata 39648989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 2697320 - 2697427
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||| | ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  2697320 tgttgaaatttggggtctaactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 2697419  T
Q  411 gtaggact 418  Q
    || |||||    
T  2697420 gtgggact 2697427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 9381015 - 9380892
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |  ||||| ||||||| || ||| || ||| |  ||||||||||  ||||||||||    
T  9381015 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtattgtgaggattgtcttctctttttatactattctcaagagtcttgtctatccgat 9380916  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    || |||||||||||||||||||||    
T  9380915 gtgggacttgggtttttcccaata 9380892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 17419902 - 17419795
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   |||||||||||    
T  17419902 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgat 17419803  T
Q  411 gtaggact 418  Q
    || |||||    
T  17419802 gtgggact 17419795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 29272992 - 29273111
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||||||| || |||||| |||||||||||    
T  29272992 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaacc 29273091  T
Q  348 gatttgcaaggtgagaattg 367  Q
    |  ||| |||||||| ||||    
T  29273092 ggcttgtaaggtgaggattg 29273111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 5325069 - 5325159
Alignment:
Q  259 ttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccg 348  Q
    |||||||||||||| |||||| | | |||| ||||||||||| ||| ||||| ||||||||||||| |||| |||||| ||||||||||||    
T  5325069 ttggtgcgtgaataggtttagacggcccttgaattcgataagctctgataccatgttgtaatttggagtctaactcatccttacaaaaccg 5325159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 434
Target Start/End: Original strand, 2997228 - 2997373
Alignment:
Q  290 aattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctca 388  Q
    ||||||| ||| ||||||||| ||||| ||||||||| || ||||||  |||||||||||  ||   ||||||| |||| ||| | |||||| |||||      
T  2997228 aattcgagaagctctaataccatgttgaaatttggggcctaactcatctttacaaaaccggcttatgaggtgaggattgcctcatctttatatactcttc 2997327  T
Q  389 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| ||||||||||||| ||| ||| |||||||| ||||    
T  2997328 tcaagagtcttatctatccgatgtgggatttgagtttttcctaata 2997373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 4022114 - 4022221
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  |||||||||  |||||||||||    
T  4022114 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgat 4022213  T
Q  411 gtaggact 418  Q
    || |||||    
T  4022214 gtgggact 4022221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 45395602 - 45395543
Alignment:
Q  376 ttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  45395602 ttataaactcttatcaagagtcttatctatctgatatgggacttgggtttttcccaataa 45395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 24382193 - 24382263
Alignment:
Q  364 attgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||| ||| ||| |||  |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  24382193 attgtctccttattaaaaattcttctcaagagtcttatctatccgatgtgggacttgggattttcccaata 24382263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 49142767 - 49142674
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||  ||| ||||||| || | ||| || |||||||||| ||||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  49142767 acaaaaccggcttgtaaggtgataaatttcttctctttataaactatcatcaa-agtcttatctatccaatgtgggacttgggtttttcccaata 49142674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 434
Target Start/End: Complemental strand, 25799217 - 25799112
Alignment:
Q  330 actcattcttacaaaaccgatt-tgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttc 428  Q
    |||||| |||||||||||  || || |||||||| |||| | ||| ||||||||||||  |||||||| | ||||||| ||||| |||| ||||||||||    
T  25799217 actcatccttacaaaaccagttctgtaaggtgaggattgccccctctttataaactcttctcaagagttttatctatctgatgtgggacatgggtttttc 25799118  T
Q  429 ccaata 434  Q
    ||||||    
T  25799117 ccaata 25799112  T

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Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 38474379 - 38474291
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| ||  |||||||||||||||||||    
T  38474379 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagaatcctatctatccgatgtaggact 38474291  T

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Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 38870938 - 38871062
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||| || || |||||| |||||||||||| ||   |||||||| | || ||||  |||||||||| | ||||||||||| ||| ||| |||    
T  38870938 tgttgaaatttgaggcctaactcatccttacaaaaccggttcttaaggtgaggagtgcctccactttataaacttttatcaagagtcttatcgatctgat 38871037  T
Q  411 gtaggactt-gggtttttcccaata 434  Q
    || |||||| |||||||||||||||    
T  38871038 gtgggacttggggtttttcccaata 38871062  T

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Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 8520082 - 8520189
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||||||||| ||||||  |||||||||||  ||| |||||||| | || ||| | ||||||||||||  ||||||||   |||||||||||    
T  8520082 tgttgaaatttggggtctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagtgctatctatccgat 8520181  T
Q  411 gtaggact 418  Q
    || |||||    
T  8520182 gtgggact 8520189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 356 - 435
Target Start/End: Complemental strand, 11590490 - 11590411
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    ||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| ||||| |||||| ||| |||||    
T  11590490 aggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactcgggtttctcctaataa 11590411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 406
Target Start/End: Complemental strand, 15013640 - 15013545
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatc 406  Q
    ||||| ||||||||| || ||||||| |||||||||||  ||| |||||||||| ||||| || |||||||||| |  |||||||||  |||||||    
T  15013640 tgttgaaatttggggcctaactcatttttacaaaaccggcttgtaaggtgagaagtgtcttctctttataaactgttctcaagagtcatatctatc 15013545  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 434
Target Start/End: Original strand, 20428991 - 20429086
Alignment:
Q  339 tacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||||   |||||||||| ||  |||| |||||||||| | ||||||||||| || |||||||||| |||||||| | ||| ||||||    
T  20428991 tacaaaaccgattcataaggtgagaaatgcttcctctttataaactattatcaagagtcttatgtatccgatgtgggacttggatgttttccaata 20429086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 29265969 - 29265910
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||| |||||  |||||||||| ||| ||||||||| |||||||||||||||||||||    
T  29265969 tttatatactcttctcaagagtcttatccatccgatgtgggacttgggtttttcccaata 29265910  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 40664319 - 40664224
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    |||||||||||| || ||| ||||||||||||  ||| |||| ||| | || ||||| |||||||||||| ||||||||||  ||||| |||||||    
T  40664319 aatttggggtctaacacatccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgt 40664224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 43423388 - 43423293
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgt 412  Q
    ||||||||| || |||||| |||||||||| |  ||| |||||||| | || ||||| ||||||||||||  |||||||| | |||||||||||||    
T  43423388 aatttggggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgt 43423293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 21638255 - 21638337
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaag 393  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | |||||||| |||||||||||| ||||||    
T  21638255 tgttgaaatttggggcctaactcatccttacaaaaccatcttgtaaggtgaggagtgtctcctctttataaactctgatcaag 21638337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 24382602 - 24382680
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||| |||| ||||  ||||||||||||  | |||||||| ||||||||||||| |||||||| |||||| |||||    
T  24382602 aggtgagtattgcctccagtttataaactctttttaagagtcttatctatccgatgtgggacttggttttttctcaata 24382680  T

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Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 29413198 - 29413136
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 432  Q
    |||| |||||||||||| ||||||||||| ||||| |||| || |||||||||| ||||||||    
T  29413198 tcctctttataaactcttatcaagagtcttatctacccgaagtgggacttgggtctttcccaa 29413136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 24131876 - 24131957
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtct 398  Q
    |||||||||||| ||||||||||| ||||| |  ||| ||| |||| |||| ||||| ||||||||||||  ||||||||||    
T  24131876 aatttggggtctaactcattcttataaaactggcttgtaagttgaggattgcctcctctttataaactcttctcaagagtct 24131957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 39648872 - 39648827
Alignment:
Q  389 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  39648872 tcaagagtcttatctatccgatgtgggacttgggattttcccaata 39648827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 373
Target Start/End: Complemental strand, 46098655 - 46098530
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||||||||||| ||| | | ||||| ||||  ||||||||| || |||||| ||| |||||||    
T  46098655 ctctttgggcttggtgcgtgaataggtttaggcggcccttaaattcgacaagctttgataccatgttaaaatttggggcctaactcatccttgcaaaacc 46098556  T
Q  348 gatttgcaaggtgagaattgtctcct 373  Q
    |  ||| | |||||| |||| |||||    
T  46098555 ggcttgtatggtgaggattgcctcct 46098530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 432
Target Start/End: Complemental strand, 49828722 - 49828665
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaa 432  Q
    |||||||| ||| ||||||||||  ||||||| ||||| |||||||||||||||||||    
T  49828722 tttataaaatcttatcaagagtcctatctatcagatgtgggacttgggtttttcccaa 49828665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 11581826 - 11581746
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||||||  |||| ||||| |||||| | | ||||||||||||| ||||||||||||| ||| ||| |||||| |||||||    
T  11581826 aaggtgatgattgcctcctctttatatattttcatcaagagtcttatctatccgatgtgggatttgagttttttccaataa 11581746  T

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Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 20735851 - 20735763
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  || ||||||| ||||||| ||||| |||||    
T  20735851 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctactcgagagtcttatctatctgatgtgggact 20735763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 28119750 - 28119854
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcc 429  Q
    |||||| |||||||||  ||||   |||||||||| || || || |||||||||||| ||||||||||| ||| |||  |||||| |||||| |||||||    
T  28119750 actcatccttacaaaatagattcataaggtgagaaatggctactctttataaactcttatcaagagtcttatccatctaatgtagaacttggatttttcc 28119849  T
Q  430 caata 434  Q
     ||||    
T  28119850 taata 28119854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 42845069 - 42845133
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||| | ||||| |||||||| ||||    
T  42845069 tcctctttataaactcttatcaagagtcttatctatctgatgtggtacttgagtttttcctaata 42845133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 45982238 - 45982174
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||||||||| | ||||||||| | ||||||| || || |||||||||||||||||||||    
T  45982238 tcctctttataaacttttatcaagagttttatctatctgacgttggacttgggtttttcccaata 45982174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 47377909 - 47377827
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcat---caagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| |||||||||| | |||||||| | ||   ||||||||| ||||||||||||| |||| || |||||||||||||    
T  47377909 aaggtgaggattgtctcctctatataaactattattatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 47377827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 9381214 - 9381099
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||| |||  ||| |||||||| |||| || || ||| || |||||  ||||||||||  ||||||||||    
T  9381214 tgttgaaatttggggcctaactcatccttacaaagccggcttgtaaggtgaggattgccttctctttttatactcttctcaagagtcttgtctatccgat 9381115  T
Q  411 gtaggacttgggtttt 426  Q
    || ||| || ||||||    
T  9381114 gtgggatttaggtttt 9381099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 427
Target Start/End: Complemental strand, 15391818 - 15391747
Alignment:
Q  356 aggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggttttt 427  Q
    ||||||| |||| ||||| |||||| ||| |  |||||||||| ||||||||||||| |||||||| |||||    
T  15391818 aggtgaggattgcctcctctttatatacttttctcaagagtcttatctatccgatgtgggacttggtttttt 15391747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 31305826 - 31305719
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||| | || |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  ||||||||   ||||||| |||    
T  31305826 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatcggat 31305727  T
Q  411 gtaggact 418  Q
    || |||||    
T  31305726 gtgggact 31305719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 36332362 - 36332303
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||| |||||||||   |||||||| |||| ||||||| |||||||||||||    
T  36332362 tttataaactctaatcaagagttctatctatccaatgtgggacttgcgtttttcccaata 36332303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 47086310 - 47086389
Alignment:
Q  355 aaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||| | |||||| | | |||||||||| ||||||||||| ||||||| ||||| |||| ||| ||||| ||||||    
T  47086310 aaggtgaggagtgtctcatgtatataaactcttatcaagagtcttatctatctgatgtgggacatggattttttccaata 47086389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 49895437 - 49895345
Alignment:
Q  340 acaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||||||  |  |||| | || |||||||||||||||  ||||||||||||||||||||| ||  || |||||| |||||| ||||||    
T  49895437 acaaaaccgatttgtgaaatgaggagtgcctcctttttataaacgatcatcaagagtctcatctatctga--tatgacttgagttttttccaata 49895345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 397
Target Start/End: Complemental strand, 12233398 - 12233312
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 397  Q
    ||||||||||||||| || |||||| |||| |||||||  ||| |||||||| | |  ||||| ||||||||||||  |||||||||    
T  12233398 tgttgtaatttggggccttactcatccttataaaaccggcttgtaaggtgaggagtacctcctctttataaactcttctcaagagtc 12233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 22892495 - 22892533
Alignment:
Q  396 tctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  22892495 tctcatctatctgatgtgggacttgggtttttcccaata 22892533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 27957804 - 27957898
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatg 411  Q
    |||||||||||| |||||| ||||||||||||  ||| | |||||| |  ||||||| |||||||||| |  |||||| || |||||||| ||||    
T  27957804 aatttggggtctaactcatccttacaaaaccggcttgtacggtgaggagcgtctcctctttataaacttttctcaagaatcccatctatcagatg 27957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 434
Target Start/End: Complemental strand, 36331962 - 36331907
Alignment:
Q  375 tttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||||| |||||||||    ||||||| |||| |||||||||||||||||||||    
T  36331962 tttataaactcttatcaagagt----tctatccaatgtgggacttgggtttttcccaata 36331907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 12314615 - 12314570
Alignment:
Q  389 tcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  12314615 tcaagagtcttgtctatccgatgtgggacttggatttttcccaata 12314570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 18374570 - 18374517
Alignment:
Q  381 aactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||||||||| ||||||  |||||||| |||| ||||||||||||||| |||||    
T  18374570 aactctcatcgagagtcctatctatccaatgtgggacttgggtttttctcaata 18374517  T

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Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 396
Target Start/End: Complemental strand, 20735637 - 20735552
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 396  Q
    ||||| ||||||||| || |||||| ||||||||||||  ||| |||||||| | || ||||| |||||||| |||  ||||||||    
T  20735637 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagt 20735552  T

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Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 22892428 - 22892501
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatc 390  Q
    ||||||||| || |||||| ||||||||||||  |||  ||||||| | || ||||| ||||||||||||||||    
T  22892428 aatttggggcctaactcatccttacaaaaccggattgtgaggtgaggagtgcctcctctttataaactctcatc 22892501  T

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Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 396
Target Start/End: Original strand, 33879767 - 33879852
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 396  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  33879767 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33879852  T

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Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 396
Target Start/End: Complemental strand, 33964488 - 33964403
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagt 396  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| |||||||| | || ||||| ||||||||||||  ||||||||    
T  33964488 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33964403  T

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Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 10017376 - 10017428
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttggg 422  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||| | |||||||    
T  10017376 tcctctttataaactcttatcaagagtcttatctatctgatgtggcacttggg 10017428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 12314549 - 12314449
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || || ||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| ||||  ||| || |||||| |||||||||||    
T  12314549 ctctttgggcttagtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattcagggcctaactcatccttacaaaacc 12314450  T
Q  348 g 348  Q
    |    
T  12314449 g 12314449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 13356911 - 13357007
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttt-tataaactctcatcaagagtctcatctatccgatgt 412  Q
    ||||| |||||| |||||||| ||||||||||  ||| ||||| || | || |||||||| |||||||||| |||||| |||  ||||| |||||||    
T  13356911 aatttagggtctaactcattcctacaaaaccggcttgtaaggttaggagtgcctccttttttataaactcttatcaagcgtcatatctaaccgatgt 13357007  T

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Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 418
Target Start/End: Original strand, 19937051 - 19937139
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| ||||||||||||  ||| |||||||| | || ||||| ||||||||||||  |||||| |   ||||||||||||| |||||    
T  19937051 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaattctatctatccgatgtgggact 19937139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 20429283 - 20429347
Alignment:
Q  370 tcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |||| |||||||||||| ||||||||||| ||| ||||||| | |||||| || ||| |||||||    
T  20429283 tcctctttataaactcttatcaagagtcttatccatccgatctgggacttaggctttacccaata 20429347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 35024242 - 35024322
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtc 397  Q
    ||||||||| || || ||| ||||||||||||   || |||||||| | || ||||| |||||||||||| ||||||||||    
T  35024242 aatttggggcctaacccatccttacaaaaccggcctgtaaggtgaggagtgcctcctgtttataaactcttatcaagagtc 35024322  T

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Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 45858751 - 45858663
Alignment:
Q  330 actcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggact 418  Q
    |||||| |||| |||||||| ||| | |||||| | || ||||| ||||||||||||  |||||| ||  ||||||||||||| |||||    
T  45858751 actcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggact 45858663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 13484 - 13298
Alignment:
Q  249 ctctttaggtttggtgcgtgaataagtttaggcagtccttaaattcgataagttctaatacc-tgttgtaatttggggtctgactcattcttacaaaacc 347  Q
    |||||| || |||||||||||||| |||||||| | |||| ||||||| ||| ||| ||||| ||||| |||| |||| || |||||| || ||||||||    
T  13484 ctctttgggcttggtgcgtgaataggtttaggcggcccttgaattcgacaagctctgataccatgttgaaattcggggcctaactcatcctcacaaaacc 13385  T
Q  348 gatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaata 434  Q
    |  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  |||||||||||| |||| || |||||||||||||    
T  13384 ggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacctgagtttttcccaata 13298  T

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Target: scaffold0434; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 13628 - 13505
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| |||| || |||||| ||  ||||||||  ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  13628 tgttgaaattcggggcctaactcatcctcgcaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 13529  T
Q  411 gtaggacttgggtttttcccaata 434  Q
     | |||||||||||||||||||||    
T  13528 ttgggacttgggtttttcccaata 13505  T

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Target: scaffold0029 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 76967 - 76851
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||||||||||||| || ||||||  |||||||||||  ||| |||||||| |||| ||||| ||||||||||||  |||||||||| |||||||||||    
T  76967 tgttgtaatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 76868  T
Q  411 gtaggacttgggttttt 427  Q
    || ||||||||||||||    
T  76867 gtgggacttgggttttt 76851  T

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Target: scaffold0989 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 2936 - 3058
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| ||||||||| || |||||| |||||||||||   ||| || ||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  2936 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 3035  T
Q  411 gtaggacttgggtttttcccaat 433  Q
    || ||||||||||||||||||||    
T  3036 gtgggacttgggtttttcccaat 3058  T

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Target: scaffold0054 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 21252 - 21376
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||| || || |||||| ||||||||||| | ||| |||||||| |||| ||||| ||||||||||||  ||||||||||  ||||||||||    
T  21252 tgttgaaatttgaggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgat 21351  T
Q  411 gtaggacttgggt-ttttcccaata 434  Q
    || |||||||||| |||||||||||    
T  21352 gtgggacttgggtattttcccaata 21376  T

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Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 11338 - 11392
Alignment:
Q  317 aatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctc 371  Q
    ||||| |||||| |||||||||||||||||||| ||| |||||||| | ||||||    
T  11338 aatttagggtctaactcattcttacaaaaccgacttgtaaggtgaggagtgtctc 11392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 1862 - 1978
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||||| ||||| |||||| ||||||||||||  ||| |||||||  | || |||||   |||||||||| ||||||||||| |||||||||||    
T  1862 tgttgaaatttgaggtctaactcatgcttacaaaaccggcttgtaaggtgaagagtgcctcctcggtataaactcttatcaagagtcttatctatccgat 1961  T
Q  411 gtaggacttgggttttt 427  Q
    ||  |||||||||||||    
T  1962 gtgagacttgggttttt 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 13621 - 13744
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactctcatcaagagtctcatctatccgat 410  Q
    ||||| |||| ||||||| |||||  ||||||||||||  ||| |||||||| |||| ||| | ||||||  ||||  ||||||||||||||||||||||    
T  13621 tgttgaaattgggggtctaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcgtctttatattctcttctcaagagtctcatctatccgat 13720  T
Q  411 gtaggacttgggtttttcccaata 434  Q
    ||  |||||| ||||| |||||||    
T  13721 gtgtgacttgagttttccccaata 13744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 59579 - 59518
Alignment:
Q  369 ctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaat 433  Q
    ||||| |||||| |||||  ||||||||   ||||||||||||| ||||||||||||||||||||    
T  59579 ctcctctttatatactcttctcaagagt---atctatccgatgtgggacttgggtttttcccaat 59518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 4228 - 4303
Alignment:
Q  311 tgttgtaatttggggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaactct 386  Q
    |||||||||||||||||| |||||| ||||||||||||  ||| |||||||| |||  ||||| |||||| |||||    
T  4228 tgttgtaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactct 4303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 435
Target Start/End: Original strand, 15696 - 15765
Alignment:
Q  366 tgtctcctttttataaactctcatcaagagtctcatctatccgatgtaggacttgggtttttcccaataa 435  Q
    |||||||| |||||||||||| ||||| | ||| ||||||  ||||| | ||||||||||||||| ||||    
T  15696 tgtctcctatttataaactcttatcaaaaatcttatctatttgatgtggtacttgggtttttcccgataa 15765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 384
Target Start/End: Original strand, 34507 - 34567
Alignment:
Q  324 ggtctgactcattcttacaaaaccgatttgcaaggtgagaattgtctcctttttataaact 384  Q
    ||||| |||||||||||||||||||  ||| | |||||| | |||||||| ||||||||||    
T  34507 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 34567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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