View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0463_low_2 (Length: 373)

Name: NF0463_low_2
Description: NF0463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0463_low_2
NF0463_low_2
[»] chr4 (39 HSPs)
chr4 (50-204)||(1793240-1793394)
chr4 (91-204)||(43433727-43433852)
chr4 (94-204)||(1211738-1211860)
chr4 (130-198)||(26037836-26037904)
chr4 (130-198)||(50286831-50286899)
chr4 (130-204)||(436089-436163)
chr4 (130-204)||(31960162-31960236)
chr4 (126-204)||(39708314-39708392)
chr4 (130-204)||(46583172-46583246)
chr4 (133-204)||(53707657-53707728)
chr4 (130-204)||(23906649-23906723)
chr4 (126-204)||(27450521-27450599)
chr4 (130-204)||(33227069-33227143)
chr4 (144-204)||(12494624-12494684)
chr4 (129-204)||(45205196-45205271)
chr4 (130-196)||(4440716-4440781)
chr4 (144-204)||(33191196-33191256)
chr4 (132-204)||(56375152-56375224)
chr4 (145-204)||(16002802-16002861)
chr4 (129-204)||(41009698-41009773)
chr4 (129-204)||(47265550-47265625)
chr4 (130-196)||(52569871-52569937)
chr4 (140-204)||(39100881-39100945)
chr4 (94-125)||(436041-436072)
chr4 (94-125)||(1777454-1777485)
chr4 (129-204)||(7092567-7092642)
chr4 (94-125)||(23906740-23906771)
chr4 (94-125)||(31960253-31960284)
chr4 (94-125)||(33227021-33227052)
chr4 (94-125)||(48174532-48174563)
chr4 (94-125)||(48622966-48622997)
chr4 (130-204)||(48174441-48174515)
chr4 (97-127)||(50286786-50286816)
chr4 (94-128)||(52569951-52569985)
chr4 (124-190)||(55578885-55578951)
chr4 (153-198)||(27983083-27983128)
chr4 (155-204)||(48622889-48622938)
chr4 (94-122)||(39708270-39708298)
chr4 (94-122)||(53707606-53707634)
[»] chr7 (29 HSPs)
chr7 (126-204)||(7272895-7272973)
chr7 (130-204)||(33072814-33072888)
chr7 (130-204)||(31005083-31005157)
chr7 (130-204)||(33350154-33350228)
chr7 (130-204)||(35906549-35906623)
chr7 (130-204)||(49029136-49029210)
chr7 (94-204)||(11593772-11593894)
chr7 (94-204)||(36651806-36651928)
chr7 (127-204)||(38606862-38606939)
chr7 (130-204)||(12841623-12841697)
chr7 (130-204)||(34869280-34869354)
chr7 (127-204)||(43281533-43281610)
chr7 (130-198)||(39906729-39906797)
chr7 (129-196)||(15681216-15681283)
chr7 (126-204)||(32630451-32630529)
chr7 (94-204)||(36869637-36869759)
chr7 (152-204)||(37617826-37617878)
chr7 (129-204)||(7189581-7189656)
chr7 (94-125)||(31005035-31005066)
chr7 (94-125)||(34869232-34869263)
chr7 (94-125)||(35906640-35906671)
chr7 (94-125)||(39906814-39906845)
chr7 (130-181)||(46356222-46356273)
chr7 (94-128)||(23404230-23404264)
chr7 (94-128)||(33072766-33072800)
chr7 (94-128)||(38606817-38606851)
chr7 (95-125)||(46356290-46356320)
chr7 (91-119)||(13859451-13859479)
chr7 (93-125)||(32630406-32630438)
[»] chr3 (17 HSPs)
chr3 (129-204)||(38849953-38850028)
chr3 (93-198)||(3186580-3186697)
chr3 (128-204)||(25191237-25191313)
chr3 (130-204)||(33272376-33272450)
chr3 (130-204)||(51448057-51448131)
chr3 (130-204)||(52138660-52138734)
chr3 (130-204)||(54278880-54278954)
chr3 (127-204)||(5168685-5168762)
chr3 (147-204)||(26490194-26490251)
chr3 (128-204)||(48953744-48953819)
chr3 (94-125)||(28245249-28245280)
chr3 (129-204)||(43695113-43695188)
chr3 (94-125)||(47542150-47542181)
chr3 (94-125)||(52138612-52138643)
chr3 (130-204)||(28245297-28245371)
chr3 (130-204)||(47542060-47542133)
chr3 (144-196)||(49503915-49503967)
[»] chr8 (17 HSPs)
chr8 (124-198)||(18125029-18125103)
chr8 (94-204)||(36544964-36545081)
chr8 (129-204)||(39946716-39946791)
chr8 (126-204)||(42854352-42854430)
chr8 (130-203)||(36565590-36565663)
chr8 (128-204)||(15215619-15215695)
chr8 (129-204)||(25288761-25288836)
chr8 (129-204)||(25300096-25300171)
chr8 (133-204)||(37077628-37077699)
chr8 (130-187)||(36395318-36395375)
chr8 (127-198)||(18752227-18752298)
chr8 (130-204)||(2796415-2796489)
chr8 (130-204)||(12492190-12492264)
chr8 (146-198)||(8879794-8879846)
chr8 (94-125)||(36395392-36395423)
chr8 (94-125)||(36565680-36565711)
chr8 (94-128)||(4032930-4032964)
[»] chr1 (27 HSPs)
chr1 (126-204)||(32083093-32083171)
chr1 (94-204)||(30202478-30202600)
chr1 (130-204)||(1210605-1210679)
chr1 (130-204)||(43240729-43240803)
chr1 (135-204)||(8391637-8391706)
chr1 (127-204)||(15085791-15085868)
chr1 (135-197)||(3192071-3192133)
chr1 (135-197)||(3200889-3200951)
chr1 (135-197)||(3209726-3209788)
chr1 (130-204)||(9592594-9592668)
chr1 (130-204)||(51441113-51441187)
chr1 (127-204)||(696126-696203)
chr1 (130-203)||(22089954-22090027)
chr1 (132-204)||(34792697-34792768)
chr1 (130-204)||(49347741-49347815)
chr1 (130-189)||(51601918-51601977)
chr1 (147-204)||(32231302-32231359)
chr1 (94-126)||(9592546-9592578)
chr1 (94-125)||(1210557-1210588)
chr1 (94-125)||(22089906-22089937)
chr1 (94-125)||(43240820-43240851)
chr1 (165-204)||(46226630-46226669)
chr1 (94-125)||(51441204-51441235)
chr1 (94-128)||(8671732-8671766)
chr1 (154-196)||(8671804-8671846)
chr1 (129-203)||(18469429-18469503)
chr1 (127-181)||(37463238-37463292)
[»] chr2 (24 HSPs)
chr2 (94-203)||(2610340-2610461)
chr2 (95-204)||(3865885-3866006)
chr2 (95-204)||(36183264-36183385)
chr2 (129-204)||(24583954-24584029)
chr2 (127-204)||(11992454-11992531)
chr2 (127-204)||(41197576-41197653)
chr2 (127-204)||(41763389-41763466)
chr2 (130-198)||(451976-452044)
chr2 (130-204)||(4807452-4807526)
chr2 (130-204)||(8180640-8180714)
chr2 (129-204)||(37281966-37282041)
chr2 (126-204)||(23997473-23997551)
chr2 (126-183)||(32443470-32443527)
chr2 (127-204)||(38429741-38429818)
chr2 (154-204)||(16097338-16097388)
chr2 (94-125)||(452061-452092)
chr2 (94-125)||(8180592-8180623)
chr2 (129-204)||(30743482-30743557)
chr2 (94-125)||(38453059-38453090)
chr2 (130-196)||(3244007-3244073)
chr2 (129-179)||(6238127-6238177)
chr2 (126-204)||(45367972-45368050)
chr2 (97-125)||(4807407-4807435)
chr2 (129-181)||(12734564-12734616)
[»] chr5 (16 HSPs)
chr5 (130-204)||(1287937-1288011)
chr5 (130-204)||(12492735-12492809)
chr5 (130-198)||(28977211-28977279)
chr5 (130-204)||(2075822-2075896)
chr5 (130-204)||(10639157-10639231)
chr5 (130-204)||(20318847-20318921)
chr5 (130-204)||(34272882-34272956)
chr5 (94-204)||(16347726-16347848)
chr5 (147-204)||(24178387-24178444)
chr5 (130-204)||(1275125-1275199)
chr5 (94-125)||(1275077-1275108)
chr5 (94-125)||(2075913-2075944)
chr5 (94-125)||(12492826-12492857)
chr5 (94-125)||(28977296-28977327)
chr5 (127-204)||(36200639-36200716)
chr5 (94-122)||(24178336-24178364)
[»] chr6 (13 HSPs)
chr6 (127-204)||(608016-608093)
chr6 (127-204)||(9706633-9706710)
chr6 (94-204)||(10100205-10100327)
chr6 (127-204)||(14030663-14030740)
chr6 (129-198)||(30031115-30031184)
chr6 (127-204)||(33496041-33496118)
chr6 (128-204)||(20427984-20428060)
chr6 (133-204)||(28085239-28085310)
chr6 (129-203)||(2065105-2065179)
chr6 (126-204)||(5631674-5631752)
chr6 (144-204)||(35043789-35043849)
chr6 (94-128)||(5258586-5258620)
chr6 (94-130)||(24631188-24631224)
[»] scaffold0024 (1 HSPs)
scaffold0024 (96-204)||(82535-82655)
[»] scaffold0570 (2 HSPs)
scaffold0570 (130-204)||(2618-2692)
scaffold0570 (94-125)||(2709-2740)
[»] scaffold0157 (1 HSPs)
scaffold0157 (144-196)||(25801-25853)
[»] scaffold0018 (1 HSPs)
scaffold0018 (130-196)||(31328-31394)
[»] scaffold0113 (1 HSPs)
scaffold0113 (130-204)||(11946-12020)


Alignment Details
Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 1793240 - 1793394
Alignment:
Q  50 tcatttatatagatgtatttttagggatcatttatactaattgtcacttaagttgaaaggaaagttctatcggacaacaatgttgtatgatacagagtgt 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1793240 tcatttatatagatgtatttttagggatcatttatactaattgtcacttaagttgaaaggaaagttctatcggacaacaatgttgtatgatacagagtgt 1793339  T
Q  150 ttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  1793340 ttggcggttaagagccaacactagaatcaagtaagtgtagcggagatgaggatgt 1793394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 43433727 - 43433852
Alignment:
Q  91 tgtcacttaagttgaaaggaaagttctatcggacaacaat------------gttgtatgatacagagtgtttggcggttaagagtcaacactagaatca 178  Q
    ||||||||||||||||||||||||||||||||||| ||||            |||||||| ||| ||||||| ||||||||||||||||||  |||||||    
T  43433727 tgtcacttaagttgaaaggaaagttctatcggacagcaatcagaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatca 43433826  T
Q  179 agtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||||||| |||||    
T  43433827 agtaagtgtagcagagatgaggatgt 43433852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 1211860 - 1211738
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca------------atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    |||||||||||||||||||||||||||||||||||            ||||||| || ||||||||||| | |||||||||| |||||| ||||||||||    
T  1211860 cacttaagttgaaaggaaagttctatcggacaacagtcagaccggtgatgttgtgtggtacagagtgttggacggttaagagccaacacgagaatcaagt 1211761  T
Q  182 aagtgtagcggagatgatgatgt 204  Q
    |||||||||||| |||| |||||    
T  1211760 aagtgtagcggatatgaggatgt 1211738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 26037904 - 26037836
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    ||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||| |||||||||||    
T  26037904 tgttgtatgatacggagtgttgggcggttaagagccaacacgagaatcaagtaagtggagcggagatga 26037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 50286831 - 50286899
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    ||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||    
T  50286831 tgttgtatgatacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatga 50286899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 436089 - 436163
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  436089 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 436163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 31960236 - 31960162
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  31960236 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 31960162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 39708314 - 39708392
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||| ||||||| |||||||||||| |||||| |||||||||||||||||| | |||||| |||||    
T  39708314 acaatgttgtatggtacggagtgttgggcggttaagaggcaacacgagaatcaagtaagtgtagtgcagatgaggatgt 39708392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 46583246 - 46583172
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  46583246 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 46583172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 53707657 - 53707728
Alignment:
Q  133 tgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||| || |||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  53707657 tgtatggtagagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 53707728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 23906723 - 23906649
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| |||  |||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  23906723 tgttgtatggtacgaagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 23906649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 27450599 - 27450521
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||| ||||||| ||| |||||||| |||||| ||| | ||||||||||||||||||||| |||||    
T  27450599 acaatgttgtatggtacggagtgttgggcagttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgt 27450521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 33227069 - 33227143
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||| ||||||||||| ||||||| |||||    
T  33227069 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcatgtaagtgtagcagagatgaggatgt 33227143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 12494624 - 12494684
Alignment:
Q  144 gagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  12494624 gagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 12494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 45205271 - 45205196
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||| ||||||| ||| |||||||  |||||| ||||||||||||| ||||||||||||| |||||    
T  45205271 atgttgtatggtacggagtgttgggcagttaagaaccaacacgagaatcaagtaagcgtagcggagatgaggatgt 45205196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 4440716 - 4440781
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    ||||||||||||| | ||||| ||||||||||||||||||  ||||||||||||||||||| |||||    
T  4440716 tgttgtatgatacggggtgtt-ggcggttaagagtcaacatgagaatcaagtaagtgtagcagagat 4440781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 33191256 - 33191196
Alignment:
Q  144 gagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||| |||| |||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  33191256 gagtgttgggcgattaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 33191196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 56375152 - 56375224
Alignment:
Q  132 ttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||| ||| ||||||| ||||||||||||||||||  ||||||||  ||||||||| ||||||| |||||    
T  56375152 ttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaaacaagtgtagcagagatgaggatgt 56375224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 16002802 - 16002861
Alignment:
Q  145 agtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||| || |||||||||||||||| |||||||||||||||||| | ||| ||||||||    
T  16002802 agtgttgggaggttaagagtcaacacgagaatcaagtaagtgtagtgaagacgatgatgt 16002861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 41009773 - 41009698
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||  ||| ||||||| |||| ||||||| |||||  |||||||||||||||||||||| |||| |||||    
T  41009773 atgttgtatagtacggagtgttgggcgattaagagccaacatgagaatcaagtaagtgtagcggaaatgaggatgt 41009698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 47265625 - 47265550
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| |||| ||| || | ||||||||||||||||| ||||||||||| |||||||  |||||| |||||    
T  47265625 atgttgtatggtacaaagtattggacggttaagagtcaacacgagaatcaagtaggtgtagcaaagatgaggatgt 47265550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 52569937 - 52569871
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    ||||||||| ||| |||||||   ||||||||||||||||  ||||||||||||||||||| |||||    
T  52569937 tgttgtatggtacggagtgttgttcggttaagagtcaacatgagaatcaagtaagtgtagcagagat 52569871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 39100945 - 39100881
Alignment:
Q  140 tacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||| | | |||||||| |||||| ||| ||| ||||||||||||||||||| |||||    
T  39100945 tacagagtgttggacagttaagagccaacacgagagtcatgtaagtgtagcggagatgaggatgt 39100881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 436041 - 436072
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  436041 cacttaagttgaaaggaaagttctatcggaca 436072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 1777485 - 1777454
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  1777485 cacttaagttgaaaggaaagttctatcggaca 1777454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 7092642 - 7092567
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||| |||| || ||| |||||||  |||||| |||| |||||||||||||| ||||||| |||||    
T  7092642 atgttgtatggtacggagttttaggcagttaagaaccaacacgagaagcaagtaagtgtagcagagatgaggatgt 7092567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 23906771 - 23906740
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  23906771 cacttaagttgaaaggaaagttctatcggaca 23906740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 31960284 - 31960253
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  31960284 cacttaagttgaaaggaaagttctatcggaca 31960253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 33227021 - 33227052
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  33227021 cacttaagttgaaaggaaagttctatcggaca 33227052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 48174563 - 48174532
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  48174563 cacttaagttgaaaggaaagttctatcggaca 48174532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 48622997 - 48622966
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  48622997 cacttaagttgaaaggaaagttctatcggaca 48622966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 48174515 - 48174441
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| | ||||||||||||||||  | |||||||||||| ||||  |||||| |||||    
T  48174515 tgttgtatggtacggagtgttggacggttaagagtcaacatgaaaatcaagtaagtatagcaaagatgaggatgt 48174441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 50286786 - 50286816
Alignment:
Q  97 ttaagttgaaaggaaagttctatcggacaac 127  Q
    |||||||||||||||||||||||||||||||    
T  50286786 ttaagttgaaaggaaagttctatcggacaac 50286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 52569985 - 52569951
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca 128  Q
    |||||||||||||||||||||||||| ||||||||    
T  52569985 cacttaagttgaaaggaaagttctattggacaaca 52569951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 55578885 - 55578951
Alignment:
Q  124 caacaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagc 190  Q
    ||||||||||||||| ||   |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  55578885 caacaatgttgtatggtatgaagtgttgggcggttaagaaccaacacgagaatcaattaagtgtagc 55578951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 27983083 - 27983128
Alignment:
Q  153 gcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    |||||||||||||||||  ||| | |||||||||||||||||||||    
T  27983083 gcggttaagagtcaacatgagagtaaagtaagtgtagcggagatga 27983128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 48622938 - 48622889
Alignment:
Q  155 ggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||| |||||||||  ||||||||||||||||||| ||||||| |||||    
T  48622938 ggttaggagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 48622889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 39708270 - 39708298
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcgg 122  Q
    |||||||||||||||||||||||||||||    
T  39708270 cacttaagttgaaaggaaagttctatcgg 39708298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 53707606 - 53707634
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcgg 122  Q
    |||||||||||||||||||||||||||||    
T  53707606 cacttaagttgaaaggaaagttctatcgg 53707634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 7272895 - 7272973
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||| ||||||||| |||||    
T  7272895 acaatgttgtatgatacagagtgttgggcggttgagagccaacacgagaatcaagtaagtgtaccggagatgaggatgt 7272973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 33072814 - 33072888
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||||||||||| ||||||||||||||||||  |||||||| |||||||||| |||||||||||||    
T  33072814 tgttgtatggtacagagtgttgggcggttaagagtcaacatgagaatcaaataagtgtagcagagatgatgatgt 33072888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 31005083 - 31005157
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  31005083 tgttgtatggtacggagtgttaggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 31005157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 33350228 - 33350154
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  33350228 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 33350154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 35906623 - 35906549
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||||||| || |||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  35906623 tgttgtatgatacggagtgttgggtggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 35906549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 49029136 - 49029210
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  49029136 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 49029210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 11593772 - 11593894
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaacaat------------gttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    ||||||||||||||||||||||||||||||||||| |            |||||||| ||| ||||||| | ||||||||||||||||  ||||||||||    
T  11593772 cacttaagttgaaaggaaagttctatcggacaacagttcgaccggcgttgttgtatggtacggagtgttggacggttaagagtcaacatgagaatcaagt 11593871  T
Q  182 aagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||||||| |||||    
T  11593872 aagtgtagcagagatgaggatgt 11593894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 36651806 - 36651928
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaacaat------------gttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    |||||||||||||||||||||||||||||||| ||||            |||||||| ||| ||||||| ||||||||||||||||||  ||||||||||    
T  36651806 cacttaagttgaaaggaaagttctatcggacagcaatccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagt 36651905  T
Q  182 aagtgtagcggagatgatgatgt 204  Q
    ||||||| | ||||||| |||||    
T  36651906 aagtgtaacagagatgaggatgt 36651928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 38606862 - 38606939
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||| ||||||| |||||||||||| |||||| ||| | |||||||||||||||||||||| ||||    
T  38606862 caatgttgtatggtacggagtgttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgataatgt 38606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 12841697 - 12841623
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| || |||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  12841697 tgttgtatggtacggagtgttgggtggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 12841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 34869280 - 34869354
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||  ||||||| |||||    
T  34869280 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagtagagatgaggatgt 34869354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 43281533 - 43281610
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||||||||||| |||||||||||| |||| | ||| | ||||||||||||||| ||||| |||||    
T  43281533 caatgttgtatggtacagagtgttgggcggttaagagccaacgcaagagtaaagtaagtgtagcggggatgaggatgt 43281610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 39906797 - 39906729
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    ||||||||| ||| ||||||| |||| |||||||||||||  ||||||||||||||||||| |||||||    
T  39906797 tgttgtatggtacggagtgttaggcgattaagagtcaacatgagaatcaagtaagtgtagcagagatga 39906729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 15681216 - 15681283
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    |||||||||| || |||||||| |||||||||||| |||||| ||| |||||||||||||| ||||||    
T  15681216 atgttgtatggtatagagtgttgggcggttaagagccaacacgagactcaagtaagtgtagtggagat 15681283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 32630451 - 32630529
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||| ||||| | |||||||||||  |||||| ||| | ||||||||||||||||||||| |||||    
T  32630451 acaatgttgtatggtacggagtgctgggcggttaagaaccaacacgagagtaaagtaagtgtagcggagatgaggatgt 32630529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 36869759 - 36869637
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca------------atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    |||||||||||||||||||||||||||||||||||            |||||||||| ||| || ||||  |||  |||||||||||||  |||||||||    
T  36869759 cacttaagttgaaaggaaagttctatcggacaacagtcaggccggcgatgttgtatggtacggaatgttgagcgactaagagtcaacacgtgaatcaagt 36869660  T
Q  182 aagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||||||| |||||    
T  36869659 aagtgtagcagagatgaggatgt 36869637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 37617826 - 37617878
Alignment:
Q  152 ggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||||||| |||||    
T  37617826 ggcggttaagagtcaacatgagaatcaagcaagtgtagcagagatgaggatgt 37617878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 7189656 - 7189581
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||||||||||| || ||||||||  |||||| | |||||||||||  ||| |||||||| |||||    
T  7189656 atgttgtatggtacagagtgttgggtggttaagaaccaacacaaaaatcaagtaagcatagtggagatgaggatgt 7189581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 31005035 - 31005066
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  31005035 cacttaagttgaaaggaaagttctatcggaca 31005066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 34869232 - 34869263
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  34869232 cacttaagttgaaaggaaagttctatcggaca 34869263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 35906671 - 35906640
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  35906671 cacttaagttgaaaggaaagttctatcggaca 35906640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 39906845 - 39906814
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  39906845 cacttaagttgaaaggaaagttctatcggaca 39906814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 46356273 - 46356222
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||    
T  46356273 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagt 46356222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 23404230 - 23404264
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca 128  Q
    ||||||||||||||||||| |||||||||||||||    
T  23404230 cacttaagttgaaaggaaaattctatcggacaaca 23404264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 33072766 - 33072800
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca 128  Q
    |||||||||| ||||||||||||||||||||||||    
T  33072766 cacttaagttaaaaggaaagttctatcggacaaca 33072800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 38606817 - 38606851
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca 128  Q
    |||||||| ||||||||||||||||||||||||||    
T  38606817 cacttaagctgaaaggaaagttctatcggacaaca 38606851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 125
Target Start/End: Complemental strand, 46356320 - 46356290
Alignment:
Q  95 acttaagttgaaaggaaagttctatcggaca 125  Q
    |||||||||||||||||||||||||||||||    
T  46356320 acttaagttgaaaggaaagttctatcggaca 46356290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 119
Target Start/End: Complemental strand, 13859479 - 13859451
Alignment:
Q  91 tgtcacttaagttgaaaggaaagttctat 119  Q
    |||||||||||||||||||||||||||||    
T  13859479 tgtcacttaagttgaaaggaaagttctat 13859451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 32630406 - 32630438
Alignment:
Q  93 tcacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||| |||||||||||||||||||||||    
T  32630406 tcacttaagctgaaaggaaagttctatcggaca 32630438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 38849953 - 38850028
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  38849953 atgttgtatggtacaaagtgttgggcggttaagagtcaacacgagaatcaagtaagtgtagcagagatgaggatgt 38850028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 3186580 - 3186697
Alignment:
Q  93 tcacttaagttgaaaggaaagttctatcggacaaca------------atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaag 180  Q
    ||||||||||||||||||||||| ||||||||||||            ||||||||||||| | |||||| |||| |||||||||||||| |||||||||    
T  3186580 tcacttaagttgaaaggaaagttatatcggacaacagtcccaccaacgatgttgtatgatatatagtgttgggcgattaagagtcaacacgagaatcaag 3186679  T
Q  181 taagtgtagcggagatga 198  Q
    ||| ||||||| ||||||    
T  3186680 taaatgtagcgtagatga 3186697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 25191237 - 25191313
Alignment:
Q  128 aatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||| ||| | ||||||||||||| ||||||| |||||    
T  25191237 aatgttgtatggtacagagtgttgggctgttaagagtcaacacgagagtaaagtaagtgtagcagagatgaggatgt 25191313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 33272450 - 33272376
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  33272450 tgttgtatggtacggagtgttgggcagttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 33272376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 51448131 - 51448057
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  |||||||| |||||||||| ||||||| |||||    
T  51448131 tgttgtatggtacggagtgttaggcggttaagagtcaacatgagaatcaactaagtgtagcagagatgaggatgt 51448057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 52138660 - 52138734
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| |||  |||||| |||||||||||||||| |  ||||||||||||||||||| ||||||| |||||    
T  52138660 tgttgtatggtacgaagtgttgggcggttaagagtcaagatgagaatcaagtaagtgtagcagagatgaggatgt 52138734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 54278880 - 54278954
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||  ||||||| ||||||||||| ||||||| |||||    
T  54278880 tgttgtatggtacggagtgttgggcagttaagagtcaacataagaatcaggtaagtgtagcagagatgaggatgt 54278954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 5168685 - 5168762
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||| ||||| | |||||||||||| |||||  ||| | ||||||||||||||||||||| |||||    
T  5168685 caatgttgtatggtacggagtgctgggcggttaagagccaacatgagagtaaagtaagtgtagcggagatgaggatgt 5168762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 26490194 - 26490251
Alignment:
Q  147 tgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||| |||||||||||  |||||  ||||||||||||||||||||||||||| |||||    
T  26490194 tgttgggcggttaagaaccaacaagagaatcaagtaagtgtagcggagatgaggatgt 26490251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 48953819 - 48953744
Alignment:
Q  128 aatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||| ||| ||||||| |||| ||||||  |||||| |||| ||||||||||| |||||||||| |||||    
T  48953819 aatgttgtatgttacggagtgttgggcgtttaagatccaacacaagaaacaagtaagtgt-gcggagatgaggatgt 48953744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 28245249 - 28245280
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  28245249 cacttaagttgaaaggaaagttctatcggaca 28245280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 43695188 - 43695113
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||| ||||||| || |||| ||| | ||||| ||||||||||||||||| | ||||||| |||||    
T  43695188 atgttgtatggtacggagtgttgggtggttgagaattaacacgagaatcaagtaagtgtaacagagatgaggatgt 43695113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 47542181 - 47542150
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  47542181 cacttaagttgaaaggaaagttctatcggaca 47542150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 52138612 - 52138643
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  52138612 cacttaagttgaaaggaaagttctatcggaca 52138643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 28245297 - 28245371
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||| | ||| ||||||| ||||||||| ||||||||  ||||| |||||||||||||  |||||| |||||    
T  28245297 tgttgtacggtacggagtgttgggcggttaaaagtcaacatgagaattaagtaagtgtagcaaagatgaggatgt 28245371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 47542133 - 47542060
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||  ||||| ||| ||||||||| ||||||| |||||    
T  47542133 tgttgtatggtacggagtgttgggcagttaagagtcaacatgagaat-aagaaagtgtagcagagatgaggatgt 47542060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 49503967 - 49503915
Alignment:
Q  144 gagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    ||||||| | ||||||||| ||||||  | |||||||||||||||||||||||    
T  49503967 gagtgttggacggttaagaatcaacatgaaaatcaagtaagtgtagcggagat 49503915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 18125029 - 18125103
Alignment:
Q  124 caacaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    ||||||||||||||| ||| ||||||| |||||||||||| |||||  |||||||||||||||||||||||||||    
T  18125029 caacaatgttgtatggtacggagtgttgggcggttaagagccaacatgagaatcaagtaagtgtagcggagatga 18125103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 36544964 - 36545081
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaacaa-------tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtg 186  Q
    |||||||||||||| ||||||||||||||| | |||       ||||||||| ||| ||||||| || |||||||||||||||  |||||||||||||||    
T  36544964 cacttaagttgaaaagaaagttctatcggatagcaaccagcgttgttgtatggtaccgagtgttgggtggttaagagtcaacatgagaatcaagtaagtg 36545063  T
Q  187 tagcggagatgatgatgt 204  Q
    |||| ||||||| |||||    
T  36545064 tagcagagatgaggatgt 36545081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 39946716 - 39946791
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||| || |||| ||||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  39946716 atgttgtatggtacggaatgttgggcggttaagagtcaacacgagaatcaagtaagtgtagcagagatgaggatgt 39946791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 42854430 - 42854352
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||| ||||||| |||||||||||| |||||| ||| | |||| |||||||||||||||| |||||    
T  42854430 acaatgttgtatggtacggagtgttgggcggttaagagccaacacgagagtaaagttagtgtagcggagatgacgatgt 42854352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 36565663 - 36565590
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatg 203  Q
    ||||||||| ||| ||||||| |||||||||||||||| |  ||||||||||||||||||| ||||||| ||||    
T  36565663 tgttgtatggtacggagtgttgggcggttaagagtcaatatgagaatcaagtaagtgtagcagagatgaggatg 36565590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 15215695 - 15215619
Alignment:
Q  128 aatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||| ||| ||||||| |||||||||||| |||||| ||| | ||||||||| ||||||||||| |||||    
T  15215695 aatgttgtatggtacggagtgttgggcggttaagagccaacacgagagtaaagtaagtgaagcggagatgaggatgt 15215619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 25288761 - 25288836
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||| ||||||| |||||||||||| |||||| |||||||| |||||||||| || |||| |||||    
T  25288761 atgttgtatgctacggagtgttgggcggttaagagccaacacgagaatcaaataagtgtagcagatatgaggatgt 25288836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 25300096 - 25300171
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||| ||||||| |||||||||||| |||||| |||||||| |||||||||| || |||| |||||    
T  25300096 atgttgtatgctacggagtgttgggcggttaagagccaacacgagaatcaaataagtgtagcagatatgaggatgt 25300171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 37077628 - 37077699
Alignment:
Q  133 tgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||| ||| ||||||| ||| |||||||| |||||| |||||||||||||||| |||||||||| |||||    
T  37077628 tgtatggtacggagtgttgggcagttaagagccaacacgagaatcaagtaagtgtggcggagatgaggatgt 37077699  T

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Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 36395375 - 36395318
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgt 187  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||    
T  36395375 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgt 36395318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 18752298 - 18752227
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    |||||||||||| ||| ||||| | | |||||||||| |||||| ||| | |||||||||||||||||||||    
T  18752298 caatgttgtatggtacggagtgctggacggttaagagccaacacgagagtaaagtaagtgtagcggagatga 18752227  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 2796415 - 2796489
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||| |||| ||| |||| || || |||||||||||||||| |||||||||||||||||||  |||||| |||||    
T  2796415 tgttatatggtaccgagtcttgggtggttaagagtcaacacgagaatcaagtaagtgtagcaaagatgaggatgt 2796489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 12492264 - 12492190
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||| ||| ||| ||||||| ||||||||||||||||||  ||||||| ||||||||||| || |||| |||||    
T  12492264 tgttgcatggtacggagtgttgggcggttaagagtcaacatgagaatcatgtaagtgtagcagatatgaggatgt 12492190  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 8879846 - 8879794
Alignment:
Q  146 gtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    ||||| |||||| ||||| || ||| |||||||||||||||||||||||||||    
T  8879846 gtgttgggcggtgaagagccagcacaagaatcaagtaagtgtagcggagatga 8879794  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 36395423 - 36395392
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  36395423 cacttaagttgaaaggaaagttctatcggaca 36395392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 36565711 - 36565680
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  36565711 cacttaagttgaaaggaaagttctatcggaca 36565680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 4032964 - 4032930
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca 128  Q
    |||||||||||||||||||||| ||||||||||||    
T  4032964 cacttaagttgaaaggaaagttttatcggacaaca 4032930  T

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Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 32083171 - 32083093
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||| | ||||| ||||||||||||||| |||||    
T  32083171 acaatgttgtatggtacagagtgttgggcggttaagagtcaacacgagagtaaagtatgtgtagcggagatgaggatgt 32083093  T

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Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 30202600 - 30202478
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaacaat------------gttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    ||||||||||||||||||||||||||||||||||| |            ||||| || ||||||||||| ||||||||||||||||||  ||||||||||    
T  30202600 cacttaagttgaaaggaaagttctatcggacaacagtccgaccggcgttgttgtgtggtacagagtgttgggcggttaagagtcaacatgagaatcaagt 30202501  T
Q  182 aagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||||||| |||||    
T  30202500 aagtgtagcagagatgaggatgt 30202478  T

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Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 1210605 - 1210679
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  1210605 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 1210679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 43240803 - 43240729
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||||||| || |||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  43240803 tgttgtatgatacggagtgttgggaggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 43240729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 8391637 - 8391706
Alignment:
Q  135 tatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||| ||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||| |||||    
T  8391637 tatggtacagagtgttgggcggttaagagtcaacacgagagtaaagtaagtgtagcggagatgaagatgt 8391706  T

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Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 15085791 - 15085868
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||| ||||||| |||||||||||| |||||| ||| | ||||||||||||||||||||| |||||    
T  15085791 caatgttgtatggtacggagtgttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgt 15085868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 3192071 - 3192133
Alignment:
Q  135 tatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatg 197  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  3192071 tatggtacagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatg 3192133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 3200889 - 3200951
Alignment:
Q  135 tatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatg 197  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  3200889 tatggtacagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatg 3200951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 3209726 - 3209788
Alignment:
Q  135 tatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatg 197  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  3209726 tatggtacagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatg 3209788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 9592594 - 9592668
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||| ||||||  ||||||||||||||||||| ||||||| |||||    
T  9592594 tgttgtatggtacggagtgttgggcggttaagaatcaacatgagaatcaagtaagtgtagcagagatgaggatgt 9592668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 51441187 - 51441113
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  |||||||||| |||||||| ||||||| |||||    
T  51441187 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtgagtgtagcagagatgaggatgt 51441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 696126 - 696203
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||| ||||||| || ||||||||| |||||| ||| | ||||||||||||||||||||| |||||    
T  696126 caatgttgtatggtacggagtgttgggtggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgt 696203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 22089954 - 22090027
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatg 203  Q
    |||||| || ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  22089954 tgttgtgtggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatg 22090027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 34792768 - 34792697
Alignment:
Q  132 ttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||| ||| ||||||| ||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  34792768 ttgtatggtacggagtgttgggcggttaagagtcaacacgagaatcaag-aagtgtagcagagatgaggatgt 34792697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 49347815 - 49347741
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| |||  |||||| ||||||||||||||||||  |||||||||||||||||||  |||||| |||||    
T  49347815 tgttgtatggtacgaagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcaaagatgaggatgt 49347741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 51601918 - 51601977
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtag 189  Q
    ||||||||| ||| ||||||| || |||||||||||||||  ||||||||||||||||||    
T  51601918 tgttgtatggtacggagtgttgggtggttaagagtcaacatgagaatcaagtaagtgtag 51601977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 32231359 - 32231302
Alignment:
Q  147 tgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||| |||||||||| |||||||| ||||||||||||||||||  ||||||| |||||    
T  32231359 tgttgggcggttaagggtcaacacgagaatcaagtaagtgtagtagagatgaggatgt 32231302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 9592546 - 9592578
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaa 126  Q
    |||||||||||||||||||||||||||||||||    
T  9592546 cacttaagttgaaaggaaagttctatcggacaa 9592578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 1210557 - 1210588
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  1210557 cacttaagttgaaaggaaagttctatcggaca 1210588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 22089906 - 22089937
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  22089906 cacttaagttgaaaggaaagttctatcggaca 22089937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 43240851 - 43240820
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  43240851 cacttaagttgaaaggaaagttctatcggaca 43240820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 46226669 - 46226630
Alignment:
Q  165 caacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  46226669 caacacgagaatcaagtaagtttagcggagatgatgatgt 46226630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 51441235 - 51441204
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  51441235 cacttaagttgaaaggaaagttctatcggaca 51441204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 8671732 - 8671766
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca 128  Q
    ||||||||||||||||||||||||||| |||||||    
T  8671732 cacttaagttgaaaggaaagttctatcagacaaca 8671766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 8671804 - 8671846
Alignment:
Q  154 cggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    ||||||||||||||||  ||||||||||||||||||| |||||    
T  8671804 cggttaagagtcaacatgagaatcaagtaagtgtagcagagat 8671846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 18469503 - 18469429
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatg 203  Q
    ||||||||||||||  |||  | |||||||||||  |||||| ||||||||||||  ||||||||||||| ||||    
T  18469503 atgttgtatgatactaagtactgggcggttaagaaccaacacgagaatcaagtaaacgtagcggagatgacgatg 18469429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 37463292 - 37463238
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    |||||||||||| ||||||||||| || ||||||||  |||||| ||||||||||    
T  37463292 caatgttgtatggtacagagtgttgggtggttaagaaccaacacaagaatcaagt 37463238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 2610340 - 2610461
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaacaat------------gttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    ||||||||||||||||||||||||||||||||||| |            |||||||| ||| ||||||| ||||||||||||||||||  ||||||||||    
T  2610340 cacttaagttgaaaggaaagttctatcggacaacagtcagactggcgttgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagt 2610439  T
Q  182 aagtgtagcggagatgatgatg 203  Q
    ||||||||| ||||||| ||||    
T  2610440 aagtgtagcagagatgaggatg 2610461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 3865885 - 3866006
Alignment:
Q  95 acttaagttgaaaggaaagttctatcggacaacaat------------gttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagta 182  Q
    |||||||||||||||||||||||||||||||||| |            |||||||| ||| ||||||| | ||||||||||||||||  |||||||||||    
T  3865885 acttaagttgaaaggaaagttctatcggacaacagtcagaccgacgttgttgtatggtacggagtgttggacggttaagagtcaacatgagaatcaagta 3865984  T
Q  183 agtgtagcggagatgatgatgt 204  Q
    |||||||| |||||||||||||    
T  3865985 agtgtagcagagatgatgatgt 3866006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 36183264 - 36183385
Alignment:
Q  95 acttaagttgaaaggaaagttctatcggacaacaat------------gttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagta 182  Q
    |||||||||||||||||||||||||||||||||| |            |||||||| ||| ||||||| ||||||||||||||||||  |||||||||||    
T  36183264 acttaagttgaaaggaaagttctatcggacaacagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagta 36183363  T
Q  183 agtgtagcggagatgatgatgt 204  Q
    |||||||| ||||||| |||||    
T  36183364 agtgtagcagagatgaggatgt 36183385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 24584029 - 24583954
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| |||| | |||| ||||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  24584029 atgttgtatggtacaaaatgttgggcggttaagagtcaacacgagaatcaagtaagtgtagcagagatgaagatgt 24583954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 11992531 - 11992454
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||| ||||| | ||||||||||||||||||| ||| | ||||||||||||||||||||| |||||    
T  11992531 caatgttgtatggtacggagtgatgggcggttaagagtcaacacgagagtaaagtaagtgtagcggagatgaggatgt 11992454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 41197653 - 41197576
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| |||| |||||| |||||||||||| |||||| ||| | ||||||||||||||||||||| |||||    
T  41197653 caatgttgtatggtacaaagtgttgggcggttaagagccaacacgagagtaaagtaagtgtagcggagatgaggatgt 41197576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 41763466 - 41763389
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||||||||||| |||||||||||  |||||| ||| | ||||||||||||||||||||| |||||    
T  41763466 caatgttgtatggtacagagtgttgggcggttaagaaccaacacgagagtaaagtaagtgtagcggagatgaggatgt 41763389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 452044 - 451976
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||    
T  452044 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatga 451976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 4807452 - 4807526
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||||||||||  |||||||||||||||||  ||||| ||||||||||||| ||||||| |||||    
T  4807452 tgttgtatgacacagagtgttgagcggttaagagtcaacatgagaattaagtaagtgtagcagagatgaggatgt 4807526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 8180640 - 8180714
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| | ||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  8180640 tgttgtatggtacggagtgttggacggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 8180714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 37281966 - 37282041
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||||||||||||  |||||||||| |||| || |||||||||||||| |||  ||||||| |||||    
T  37281966 atgttgtatgatacagagtgttaagcggttaagaatcaatacgagaatcaagtaagtatagttgagatgaggatgt 37282041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 23997473 - 23997551
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| |||  |||||| ||| ||||||||||||||| |||  |||||||||||| ||||||||| |||||    
T  23997473 acaatgttgtatggtacgaagtgttgggcagttaagagtcaacacgagagccaagtaagtgtaacggagatgaagatgt 23997551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 32443470 - 32443527
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaa 183  Q
    ||||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||||    
T  32443470 acaatgttgtatggtacagagtgttgggtggttaagaatcaacacgagaatcaagtaa 32443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 38429741 - 38429818
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||| ||||||| |||||||||||  |||||| ||| |  |||||||||||||||||||| |||||    
T  38429741 caatgttgtatggtacggagtgttgggcggttaagaaccaacacgagagtagagtaagtgtagcggagatgaggatgt 38429818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 16097388 - 16097338
Alignment:
Q  154 cggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| |||||  ||||||||||||||||||||||||||| |||||    
T  16097388 cggttaagagccaacatgagaatcaagtaagtgtagcggagatgaggatgt 16097338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 452092 - 452061
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  452092 cacttaagttgaaaggaaagttctatcggaca 452061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 8180592 - 8180623
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  8180592 cacttaagttgaaaggaaagttctatcggaca 8180623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 30743482 - 30743557
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||| ||| ||| ||| |||| |||| || |||||| |||||||||||||||| | |||||||| |||||    
T  30743482 atgttgtatggtacggagagttaggcgattaaaagccaacacgagaatcaagtaagtgttgtggagatgaggatgt 30743557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 38453090 - 38453059
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  38453090 cacttaagttgaaaggaaagttctatcggaca 38453059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 3244073 - 3244007
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    ||||| ||| ||| ||||||| | | ||||||||||||||  ||||||||||||||||||| |||||    
T  3244073 tgttgaatggtacggagtgttggacagttaagagtcaacatgagaatcaagtaagtgtagcagagat 3244007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 6238177 - 6238127
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaa 179  Q
    |||||||||| ||| ||||||| || |||||||||||||||| ||||||||    
T  6238177 atgttgtatggtacggagtgttgggtggttaagagtcaacacgagaatcaa 6238127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 45368050 - 45367972
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||| | ||| ||||| | |||| ||||||| |||||| ||| | |||||||| || |||||||||||||||    
T  45368050 acaatgttgtaaggtacggagtgctgggcgattaagagccaacacgagagtaaagtaagtataacggagatgatgatgt 45367972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 125
Target Start/End: Original strand, 4807407 - 4807435
Alignment:
Q  97 ttaagttgaaaggaaagttctatcggaca 125  Q
    |||||||||||||||||||||||||||||    
T  4807407 ttaagttgaaaggaaagttctatcggaca 4807435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 12734564 - 12734616
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    |||||||||| ||||||||||| ||||||| |||| |||||  ||||||||||    
T  12734564 atgttgtatggtacagagtgttgggcggtttagagccaacatgagaatcaagt 12734616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 1288011 - 1287937
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  1288011 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 1287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 12492809 - 12492735
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  12492809 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 12492735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 28977279 - 28977211
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||    
T  28977279 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatga 28977211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 2075896 - 2075822
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| ||||||||||||||||||  ||||| ||||||||||||| ||||||| |||||    
T  2075896 tgttgtatggtacggagtgttgggcggttaagagtcaacatgagaattaagtaagtgtagcagagatgaggatgt 2075822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 10639157 - 10639231
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| |||||| |||||||||||  ||||||||||||||||||| ||||||| |||||    
T  10639157 tgttgtatggtacggagtgttgggcggtgaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 10639231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 20318847 - 20318921
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| |||||||  |||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  20318847 tgttgtatggtacggagtgttgcgcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 20318921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 34272882 - 34272956
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| |||||||||||||||| |  ||||||||||||||||||| ||||||| |||||    
T  34272882 tgttgtatggtacggagtgttgggcggttaagagtcaatatgagaatcaagtaagtgtagcagagatgaggatgt 34272956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 16347848 - 16347726
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca------------atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    |||||||||||||||||||||||||||||||||||            || ||||||| ||| |||||||  ||||||||||| |||||| ||| | ||||    
T  16347848 cacttaagttgaaaggaaagttctatcggacaacactcagaccgacgatattgtatggtacggagtgttgagcggttaagagccaacacgagagttaagt 16347749  T
Q  182 aagtgtagcggagatgatgatgt 204  Q
    ||||||||||||||||| |||||    
T  16347748 aagtgtagcggagatgaggatgt 16347726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 24178387 - 24178444
Alignment:
Q  147 tgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||| ||||||||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  24178387 tgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 24178444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 1275125 - 1275199
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||| ||||||| |||||||| |||||||||  |||||||||||||  |||| ||||||| |||||    
T  1275125 tgttgtatggtacggagtgttgggcggttacgagtcaacatgagaatcaagtaagcatagcagagatgaggatgt 1275199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 1275077 - 1275108
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  1275077 cacttaagttgaaaggaaagttctatcggaca 1275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 2075944 - 2075913
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  2075944 cacttaagttgaaaggaaagttctatcggaca 2075913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 12492857 - 12492826
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  12492857 cacttaagttgaaaggaaagttctatcggaca 12492826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 28977327 - 28977296
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  28977327 cacttaagttgaaaggaaagttctatcggaca 28977296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 36200639 - 36200716
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||||||| |||| | |||||||||||  ||||   ||||||||||||| ||| | ||||||| |||||    
T  36200639 caatgttgtatgatacaaagtggtaggcggttaagaaccaacgtgagaatcaagtaagcgtatcagagatgaggatgt 36200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 24178336 - 24178364
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcgg 122  Q
    |||||||||||||||||||||||||||||    
T  24178336 cacttaagttgaaaggaaagttctatcgg 24178364  T

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Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 608016 - 608093
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||  ||| ||||||| |||||||||||| |||||| ||||| ||||||||||||||||||||| |||||    
T  608016 caatgttgtattgtacggagtgttgggcggttaagagccaacacgagaataaagtaagtgtagcggagatgaggatgt 608093  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 9706633 - 9706710
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| |||  |||||| || |||||||||||||||| ||| | ||||||||||||||||||||| |||||    
T  9706633 caatgttgtatggtacgaagtgttaggtggttaagagtcaacacgagagtaaagtaagtgtagcggagatgaggatgt 9706710  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 10100327 - 10100205
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca------------acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagt 181  Q
    ||||||||||||||||||||||||||||||||            || |||||||||| ||| ||||||| || ||||||||| ||| || ||| ||||||    
T  10100327 cacttaagttgaaaggaaagttctatcggacagtagtcagaccgacgatgttgtatggtacggagtgttgggaggttaagagccaagacgagagtcaagt 10100228  T
Q  182 aagtgtagcggagatgatgatgt 204  Q
    ||||||||||||||||| |||||    
T  10100227 aagtgtagcggagatgaggatgt 10100205  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 14030663 - 14030740
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||| ||||||| ||||||||| ||||||||| ||| | ||||||||||||| ||||||| |||||    
T  14030663 caatgttgtatggtacggagtgttgggcggttaaaagtcaacacgagagtaaagtaagtgtagcagagatgaggatgt 14030740  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 30031115 - 30031184
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatga 198  Q
    |||||||||| ||| ||||||| |||||||||||| |||||  |||||||||| ||||||||||||||||    
T  30031115 atgttgtatggtacggagtgttgggcggttaagagccaacatgagaatcaagttagtgtagcggagatga 30031184  T

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Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 33496041 - 33496118
Alignment:
Q  127 caatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||||||||| ||||||||||| | ||||||| |  |||||  ||||||||||||||||| |||||||||||||||    
T  33496041 caatgttgtatggtacagagtgttggacggttaaaaaccaacatgagaatcaagtaagtgtaacggagatgatgatgt 33496118  T

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Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 20428060 - 20427984
Alignment:
Q  128 aatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||  ||||||||||| || ||||||||| |||||| ||| |||| |||||||||||||||||| |||||    
T  20428060 aatgttgtatagtacagagtgttgggtggttaagagccaacacgagagtcaaataagtgtagcggagatgaggatgt 20427984  T

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Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 28085239 - 28085310
Alignment:
Q  133 tgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    |||||| ||| ||||||| ||||| ||||||||||||  ||||||||||||||||||| ||||||| |||||    
T  28085239 tgtatggtacggagtgttgggcggctaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgt 28085310  T

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Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 2065179 - 2065105
Alignment:
Q  129 atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatg 203  Q
    |||||||||| ||| || |||| | |||||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  2065179 atgttgtatggtacggaatgttggacggttaagagccaacacgagaatcaagtacgtgtagcggagatgaggatg 2065105  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 5631674 - 5631752
Alignment:
Q  126 acaatgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||||||| ||  ||||||| |||||||||||| |||| | ||| | |||||||||||||| |||||| |||||    
T  5631674 acaatgttgtatggtatggagtgttgggcggttaagagccaacgcgagagtaaagtaagtgtagcgaagatgaggatgt 5631752  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 35043849 - 35043789
Alignment:
Q  144 gagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||| | |||||||||| |||||  ||| ||||||||||||||||||||||| |||||    
T  35043849 gagtgttggacggttaagagccaacatgagagtcaagtaagtgtagcggagatgaagatgt 35043789  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 5258620 - 5258586
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaaca 128  Q
    |||||||| ||||||||||||||||||||||||||    
T  5258620 cacttaagctgaaaggaaagttctatcggacaaca 5258586  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 24631224 - 24631188
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggacaacaat 130  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  24631224 cacttaagttgaaatgaaagttatatcggacaacaat 24631188  T

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Target: scaffold0024 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 82535 - 82655
Alignment:
Q  96 cttaagttgaaaggaaagttctatcggacaaca------------atgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaa 183  Q
    |||||||||||||||||||||||||||||||||            || ||||||| ||| ||||||| |||||||||||| |||||  ||||||||||||    
T  82535 cttaagttgaaaggaaagttctatcggacaacagtcagaccgacgatcttgtatggtacggagtgttgggcggttaagagccaacatgagaatcaagtaa 82634  T
Q  184 gtgtagcggagatgatgatgt 204  Q
    ||| ||||||||||| |||||    
T  82635 gtgcagcggagatgaggatgt 82655  T

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Target: scaffold0570 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 2692 - 2618
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||||||| ||  ||||||| ||||||||||||||||||  | ||||||||||||||||| ||||||| |||||    
T  2692 tgttgtatggtatggagtgttgggcggttaagagtcaacatgataatcaagtaagtgtagcagagatgaggatgt 2618  T

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Target: scaffold0570; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 2740 - 2709
Alignment:
Q  94 cacttaagttgaaaggaaagttctatcggaca 125  Q
    ||||||||||||||||||||||||||||||||    
T  2740 cacttaagttgaaaggaaagttctatcggaca 2709  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 25853 - 25801
Alignment:
Q  144 gagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||| |||||    
T  25853 gagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagat 25801  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 31328 - 31394
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagat 196  Q
    ||||||| | ||| ||||||| || |||||||||||||||  ||||||||||||||||||| |||||    
T  31328 tgttgtacggtacggagtgttgggtggttaagagtcaacatgagaatcaagtaagtgtagcagagat 31394  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 12020 - 11946
Alignment:
Q  130 tgttgtatgatacagagtgtttggcggttaagagtcaacactagaatcaagtaagtgtagcggagatgatgatgt 204  Q
    ||||| ||| |||| | |||| ||||| ||||||||||||  ||||||||||| ||||||| ||||||| |||||    
T  12020 tgttgcatggtacaaaatgttgggcgggtaagagtcaacatgagaatcaagtatgtgtagcagagatgaggatgt 11946  T

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