View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0468_high_3 (Length: 292)

Name: NF0468_high_3
Description: NF0468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0468_high_3
NF0468_high_3
[»] chr1 (24 HSPs)
chr1 (34-222)||(50444555-50444743)
chr1 (81-176)||(46110399-46110494)
chr1 (89-225)||(27814360-27814497)
chr1 (81-222)||(15072693-15072835)
chr1 (84-222)||(16963905-16964043)
chr1 (46-156)||(35943315-35943426)
chr1 (52-176)||(48527652-48527775)
chr1 (98-222)||(49802816-49802940)
chr1 (82-156)||(41873875-41873950)
chr1 (159-225)||(52628855-52628921)
chr1 (73-145)||(50442752-50442825)
chr1 (71-177)||(18821632-18821738)
chr1 (130-225)||(45584960-45585057)
chr1 (81-160)||(14470989-14471069)
chr1 (81-139)||(12665944-12666003)
chr1 (81-202)||(30535573-30535694)
chr1 (81-124)||(38280999-38281042)
chr1 (46-214)||(44999329-44999499)
chr1 (46-156)||(46467283-46467393)
chr1 (81-130)||(21507229-21507277)
chr1 (97-170)||(48492853-48492925)
chr1 (46-149)||(15232897-15233000)
chr1 (72-128)||(32693302-32693358)
chr1 (81-156)||(52078047-52078123)
[»] chr3 (24 HSPs)
chr3 (34-225)||(18197215-18197399)
chr3 (84-221)||(34818158-34818295)
chr3 (80-222)||(10730956-10731098)
chr3 (84-222)||(41263709-41263847)
chr3 (84-156)||(40244322-40244395)
chr3 (84-153)||(3209873-3209943)
chr3 (94-222)||(27837991-27838118)
chr3 (56-156)||(42685013-42685114)
chr3 (84-222)||(35372066-35372203)
chr3 (84-207)||(38240992-38241114)
chr3 (130-222)||(3208555-3208648)
chr3 (71-149)||(7270467-7270546)
chr3 (46-176)||(21074148-21074279)
chr3 (130-225)||(38242468-38242564)
chr3 (71-131)||(40892319-40892379)
chr3 (163-222)||(50810819-50810879)
chr3 (163-222)||(50864985-50865045)
chr3 (130-207)||(53622748-53622827)
chr3 (95-177)||(40745384-40745466)
chr3 (106-216)||(53612948-53613058)
chr3 (84-217)||(26887462-26887595)
chr3 (81-222)||(53624266-53624406)
chr3 (70-153)||(35371048-35371132)
chr3 (76-222)||(53194769-53194915)
[»] chr5 (14 HSPs)
chr5 (81-225)||(325089-325233)
chr5 (103-222)||(30912088-30912207)
chr5 (46-222)||(22308667-22308844)
chr5 (52-176)||(1102736-1102859)
chr5 (65-222)||(27705202-27705361)
chr5 (81-222)||(324109-324252)
chr5 (130-222)||(22047803-22047897)
chr5 (46-176)||(30910858-30910990)
chr5 (106-222)||(30857871-30857987)
chr5 (81-156)||(33173862-33173939)
chr5 (12-41)||(1759971-1760000)
chr5 (81-122)||(20539249-20539290)
chr5 (81-222)||(39603924-39604068)
chr5 (130-194)||(1010318-1010381)
[»] chr4 (37 HSPs)
chr4 (46-225)||(1794479-1794661)
chr4 (81-225)||(1587250-1587395)
chr4 (81-225)||(6348223-6348367)
chr4 (81-223)||(1829823-1829966)
chr4 (84-222)||(52963640-52963778)
chr4 (93-222)||(7708704-7708833)
chr4 (70-222)||(13165566-13165718)
chr4 (93-222)||(23203869-23203998)
chr4 (84-222)||(40792822-40792958)
chr4 (81-156)||(53435656-53435732)
chr4 (106-223)||(393566-393684)
chr4 (84-156)||(2311090-2311163)
chr4 (107-222)||(10168711-10168828)
chr4 (46-156)||(15449942-15450053)
chr4 (46-156)||(44498598-44498709)
chr4 (69-207)||(52239963-52240104)
chr4 (96-214)||(52241075-52241192)
chr4 (81-222)||(53205386-53205528)
chr4 (140-222)||(1188914-1188996)
chr4 (164-222)||(2310994-2311052)
chr4 (81-194)||(13533165-13533277)
chr4 (81-222)||(44503582-44503724)
chr4 (61-156)||(27850819-27850916)
chr4 (81-217)||(2312383-2312522)
chr4 (46-149)||(7053321-7053425)
chr4 (90-217)||(42810115-42810243)
chr4 (81-156)||(53432199-53432275)
chr4 (81-176)||(56085465-56085560)
chr4 (108-177)||(4871610-4871680)
chr4 (182-222)||(390288-390328)
chr4 (182-222)||(1831268-1831308)
chr4 (81-156)||(4714157-4714233)
chr4 (182-222)||(10167496-10167536)
chr4 (166-222)||(23201917-23201973)
chr4 (182-222)||(31965906-31965946)
chr4 (182-222)||(42871166-42871206)
chr4 (46-130)||(56000448-56000532)
[»] chr7 (27 HSPs)
chr7 (73-222)||(47454408-47454557)
chr7 (93-222)||(41079751-41079880)
chr7 (85-225)||(32256304-32256443)
chr7 (84-222)||(11501251-11501389)
chr7 (73-146)||(22691116-22691190)
chr7 (49-222)||(47059179-47059357)
chr7 (81-222)||(6173356-6173495)
chr7 (94-207)||(22337288-22337401)
chr7 (84-217)||(43459531-43459664)
chr7 (81-222)||(32255060-32255204)
chr7 (47-156)||(3413669-3413779)
chr7 (98-222)||(22538769-22538893)
chr7 (106-222)||(40812542-40812658)
chr7 (69-156)||(40811458-40811546)
chr7 (81-222)||(43460725-43460868)
chr7 (81-194)||(9662141-9662253)
chr7 (97-175)||(44554687-44554764)
chr7 (81-177)||(669292-669387)
chr7 (183-223)||(30333355-30333395)
chr7 (182-225)||(33096937-33096980)
chr7 (55-156)||(40508515-40508618)
chr7 (56-222)||(47060354-47060520)
chr7 (84-177)||(35295816-35295909)
chr7 (81-160)||(4299951-4300031)
chr7 (90-222)||(13564150-13564284)
chr7 (81-156)||(22115067-22115143)
chr7 (81-156)||(40509637-40509713)
[»] chr8 (22 HSPs)
chr8 (84-222)||(42100013-42100151)
chr8 (93-222)||(41629779-41629908)
chr8 (84-221)||(32693902-32694039)
chr8 (81-225)||(32798434-32798580)
chr8 (46-223)||(22551077-22551254)
chr8 (83-222)||(30786747-30786888)
chr8 (49-156)||(42870952-42871060)
chr8 (84-207)||(13116416-13116539)
chr8 (84-177)||(32797257-32797350)
chr8 (46-207)||(45281056-45281219)
chr8 (163-222)||(28420159-28420219)
chr8 (130-222)||(42872143-42872234)
chr8 (46-156)||(14840767-14840878)
chr8 (70-176)||(24192555-24192661)
chr8 (70-176)||(24305160-24305266)
chr8 (84-222)||(45279751-45279889)
chr8 (70-177)||(9854772-9854879)
chr8 (183-222)||(6398503-6398542)
chr8 (84-223)||(44076267-44076409)
chr8 (163-222)||(28418877-28418937)
chr8 (181-217)||(29103563-29103599)
chr8 (46-130)||(34617066-34617150)
[»] scaffold0031 (2 HSPs)
scaffold0031 (46-225)||(125098-125281)
scaffold0031 (46-222)||(124040-124215)
[»] chr2 (19 HSPs)
chr2 (46-153)||(34513421-34513529)
chr2 (84-214)||(32470482-32470612)
chr2 (84-222)||(1083059-1083197)
chr2 (106-222)||(17460613-17460729)
chr2 (81-225)||(28562713-28562857)
chr2 (56-225)||(43033150-43033319)
chr2 (84-176)||(6028834-6028926)
chr2 (130-222)||(11317320-11317413)
chr2 (46-222)||(6030337-6030515)
chr2 (81-210)||(6032217-6032347)
chr2 (86-222)||(29219456-29219595)
chr2 (86-222)||(29332755-29332894)
chr2 (183-225)||(43034477-43034519)
chr2 (106-217)||(11316009-11316120)
chr2 (130-225)||(32469218-32469313)
chr2 (70-156)||(42641752-42641839)
chr2 (81-222)||(18616907-18617051)
chr2 (130-215)||(11547737-11547824)
chr2 (87-131)||(12095439-12095483)
[»] chr6 (8 HSPs)
chr6 (93-222)||(23397270-23397399)
chr6 (84-222)||(29380262-29380400)
chr6 (84-222)||(17839046-17839184)
chr6 (107-212)||(5186649-5186753)
chr6 (46-217)||(23392290-23392464)
chr6 (81-222)||(29381632-29381775)
chr6 (163-222)||(232245-232305)
chr6 (86-222)||(17837687-17837825)
[»] scaffold0034 (1 HSPs)
scaffold0034 (84-175)||(109652-109743)
[»] scaffold2071 (1 HSPs)
scaffold2071 (53-148)||(556-652)
[»] scaffold0077 (1 HSPs)
scaffold0077 (84-222)||(52663-52801)
[»] scaffold1152 (1 HSPs)
scaffold1152 (106-225)||(2404-2524)
[»] scaffold0219 (1 HSPs)
scaffold0219 (70-177)||(8083-8189)
[»] scaffold0201 (1 HSPs)
scaffold0201 (82-156)||(21264-21339)
[»] scaffold0013 (1 HSPs)
scaffold0013 (46-192)||(32672-32822)
[»] scaffold0118 (1 HSPs)
scaffold0118 (81-217)||(43476-43615)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 34 - 222
Target Start/End: Original strand, 50444555 - 50444743
Alignment:
Q  34 gtaagaaaatattagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacact 133  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50444555 gtaagaaaatattagacatgcataatccaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacact 50444654  T
Q  134 cttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  50444655 cttaaggttggtccaacatagacgttttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatgagggaccaaaa 50444743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 46110494 - 46110399
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaac 176  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||| ||||||||||||||    
T  46110494 aaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccataga-tatttagagttaaagttaac 46110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 27814497 - 27814360
Alignment:
Q  89 aaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagtt-aaagttaacgatttggatt 186  Q
    ||||||||||||| ||||||||||||||||| ||||||||| |||| |||| |||||||||||||||||  ||| ||||| |||||||||  |  |||||    
T  27814497 aaacggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagac-atttagagttaaaagttaaccgtcgggatt 27814399  T
Q  187 tatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    |||||| ||| | ||||||||||||||||||||||||||    
T  27814398 tatttggcaaacagaggaaaaaatgagggaccaaaaggt 27814360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 15072693 - 15072835
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac-ga 178  Q
    ||||||||||||  || |||| || ||||||||||  ||||||| ||||| |||||| ||||||||||||||||||| |||  | |||||||||||| ||    
T  15072693 aaaagatcaaacaatttaaattaagaaaattaatagagtctacggtggaccactctttaggttggtccaccatagacatttgag-gttaaagttaacaga 15072791  T
Q  179 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
      |||||||||||| ||| ||||||||||||| |||||||||||    
T  15072792 catggatttatttggcaaacggaggaaaaaataagggaccaaaa 15072835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 16964043 - 16963905
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||| |||| |||||||||||||| |||| ||  ||| ||||||||||||||  |  |    
T  16964043 agatcgaagggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaac-atttagagttaaagttaacagtcag 16963945  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
     ||||||||| ||| |||||||||| ||||||||| ||||    
T  16963944 catttatttggcaaacggaggaaaagatgagggactaaaa 16963905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 35943315 - 35943426
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggtt--aaaatgaacaaaattaataaggtctacgatgga-cactcttaaggtt 142  Q
    ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||||||  ||||| || ||| ||||||||||||| | |||| |||||||||||||    
T  35943315 tagacctgcgtaattcaatggtcatcctttcaaa-aaaagatcaaacggttttaaaataaa-aaatttaataaggtctatggtggatcactcttaaggtt 35943412  T
Q  143 ggtccaccatagac 156  Q
    ||||||||||||||    
T  35943413 ggtccaccatagac 35943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 176
Target Start/End: Complemental strand, 48527775 - 48527652
Alignment:
Q  52 tgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccacc 150  Q
    |||||||| ||||| ||||| ||||||| |||||||||||| ||| |||| || | |||| ||||| |||| | ||||| |||||||| ||||||| |||    
T  48527775 tgcataatccaatggtcatcatttaaaa-aaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactcttaaagttggtcgacc 48527677  T
Q  151 atagacgttttggagttaaagttaac 176  Q
    |||||| ||| |||||||||||||||    
T  48527676 atagacattt-ggagttaaagttaac 48527652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 49802816 - 49802940
Alignment:
Q  98 aaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaa 196  Q
    |||| |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||  ||| ||||| ||||||||  |  ||||||||||| |||    
T  49802816 aaataaacaaaattaatgaggtctacgatagaccacttttaaggttggtacaccatagac-atttagagttgaagttaaccgtcgggatttatttggcaa 49802914  T
Q  197 tcggaggaaaaaatgagggaccaaaa 222  Q
     ||||| |||| ||||||||| ||||    
T  49802915 acggagaaaaagatgagggactaaaa 49802940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 41873875 - 41873950
Alignment:
Q  82 aaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    ||||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||||||||||    
T  41873875 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccatagac 41873950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 52628855 - 52628921
Alignment:
Q  159 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||| |||||| |||||| ||  |||||||||| ||| ||||||||||||||||||||||||||||    
T  52628855 tttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggt 52628921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 50442825 - 50442752
Alignment:
Q  73 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggt 145  Q
    ||||||||||||||||||| ||||||||| |  ||||||||||  ||||||||||||| |||||||| ||||||    
T  50442825 tttaaaacaaaagatcaaatggttaaaattattaaaattaatacagtctacgatggactactcttaaagttggt 50442752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 18821632 - 18821738
Alignment:
Q  71 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaa 169  Q
    ||||||||||||||||||||||||||||| |  | |||||||||| | |||  | | || ||||||||||||| |||||||||||||  |||| ||||||    
T  18821632 cttttaaaacaaaagatcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagac-atttgaagttaa 18821730  T
Q  170 agttaacg 177  Q
    || |||||    
T  18821731 agataacg 18821738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 45584960 - 45585057
Alignment:
Q  130 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||||||| ||||| ||||||||||| |  |||||  ||||| |||||| |  ||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  45584960 cactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggt 45585057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 14471069 - 14470989
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttt 160  Q
    ||||||||||||||| |||||  | ||||||||| | || || | ||||| ||||||||||||||||||| ||||||||||    
T  14471069 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtttatggtggaccactcttaaggttggtccactatagacgttt 14470989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 12666003 - 12665944
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaag 139  Q
    |||||||||||||||| |||| ||||||||||||||| |||| | |||| ||||||||||    
T  12666003 aaaagatcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaag 12665944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 30535573 - 30535694
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaac-ga 178  Q
    ||||||||| | ||||||||| || ||||| ||||||||||| | |||||  ||| ||| ||||||||||||||||| ||| | || |||||||||  ||    
T  30535573 aaaagatcagagggttaaaattaa-aaaataaataaggtctatggtggactatctataatgttggtccaccatagacattt-gaagctaaagttaataga 30535670  T
Q  179 tttggatttatttgacaatcggag 202  Q
    | |||||||||||||||| |||||    
T  30535671 tgtggatttatttgacaaacggag 30535694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 38281042 - 38280999
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacg 124  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  38281042 aaaagatcaaacggttaaaataaaaaaaattaataaagtctacg 38280999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 214
Target Start/End: Original strand, 44999329 - 44999499
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaa-aagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttg 143  Q
    ||||| ||| |||| ||||| ||||||||| ||| || ||||||||| |||| || | || | |||||||||| |||| | || || ||||||| | |||    
T  44999329 tagacttgcgtaatccaatggtcatcttttgaaaaaacaagatcaaatggtttaagttaaaataattaataagatctatggtgaaccactcttacgattg 44999428  T
Q  144 gtccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggaggaaaaaatgagg 214  Q
    ||||||||||||| |||  | |||||||||||| | |  ||||||||||| ||| | |||||||||||||||    
T  44999429 gtccaccatagacatttaag-gttaaagttaacagctagggatttatttggcaaacagaggaaaaaatgagg 44999499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 46467393 - 46467283
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    |||||| | ||||||||||| ||||||||| | | || | ||||||||||| |||| || ||| |||||||  |||||| |||| |||| |||| |||||    
T  46467393 tagacacgtataattcaatggtcatctttttagaaaatatatcaaacggtttaaattaa-aaatttaataacatctacggtggatcacttttaatgttgg 46467295  T
Q  145 tccaccatagac 156  Q
    ||||||||||||    
T  46467294 tccaccatagac 46467283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 21507277 - 21507229
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac 130  Q
    |||||||||||||| | |||| || |||||||||||||||||||||||||    
T  21507277 aaaagatcaaacggctgaaattaa-aaaattaataaggtctacgatggac 21507229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 48492925 - 48492853
Alignment:
Q  97 aaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaa 170  Q
    ||||| ||||||||||||||| |||||| |||||  |  ||| |||||||||||||||||  ||||||||||||    
T  48492925 aaaattaacaaaattaataagatctacggtggaccattataatgttggtccaccatagac-atttggagttaaa 48492853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 15233000 - 15232897
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    |||||||||||||| ||||| |  |||||||||| |||| ||||||||||| | || || | |||||||| | |||| |||||| |||| |||| |||||    
T  15233000 tagacatgcataatccaatggttctcttttaaaa-aaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttgg 15232902  T
Q  145 tccac 149  Q
    |||||    
T  15232901 tccac 15232897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 32693302 - 32693358
Alignment:
Q  72 ttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgg 128  Q
    |||||||||||||||| ||| | ||||| | || ||| |||||||||||||||||||    
T  32693302 ttttaaaacaaaagataaaatgcttaaatttaagaaatttaataaggtctacgatgg 32693358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 52078047 - 52078123
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagac 156  Q
    |||| |||||||||||||||| || | |||||||| | |||| | || | |||||||||||||||| ||||||||||    
T  52078047 aaaaaatcaaacggttaaaattaaaataattaataggatctatggtgtatcactcttaaggttggttcaccatagac 52078123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 7e-58; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 18197399 - 18197215
Alignment:
Q  34 gtaagaaaatattagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacact 133  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||| ||||||        
T  18197399 gtaagaaaatattagacatgtataatccaatggtcatcttttaaaacaaaagatgaagcggttaaaattaacaaaattaataaggtctatgatgga---- 18197304  T
Q  134 cttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
       ||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||    
T  18197303 ---aaggttggttcaccatagatgttttggagttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggt 18197215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 34818295 - 34818158
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| |||||||||||| |||||||||||||||||||| ||| || || | ||||||||| || |||||||||  |||  ||||||||||||| ||| |    
T  34818295 agatcgaacggttaaaattaacaaaattaataaggtctatgatagatcatttttaaggttgatcaaccatagac-atttaaagttaaagttaactattgg 34818197  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaa 221  Q
    |||||||||| |||  |||||||||  ||||||||||||    
T  34818196 gatttatttggcaaatggaggaaaatctgagggaccaaa 34818158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 222
Target Start/End: Complemental strand, 10731098 - 10730956
Alignment:
Q  80 caaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacga 178  Q
    ||||||||| || | ||||||| ||||||||||||||||| || ||| ||| ||| ||||||||||| |||||||||| ||| | |||||||||||||      
T  10731098 caaaagatcgaatgattaaaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacattt-gaagttaaagttaacag 10731000  T
Q  179 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |  ||||||||||| ||| ||||| ||||| ||| |||||||||    
T  10730999 tcgggatttatttggcaaacggagaaaaaagtgaaggaccaaaa 10730956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 41263847 - 41263709
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||  || ||| ||| ||||||||| |||||||||||  ||| | |||||||||||||  || |    
T  41263847 agatcgaatggttaaaattaacaaaattaataaggtctagaatagaccacttttaaggttgatccaccatagatatttag-agttaaagttaacacttgg 41263749  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||| ||||||| ||||| |||| |||| |||||||||    
T  41263748 gatttaattgacaaacggagaaaaagatgacggaccaaaa 41263709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 40244395 - 40244322
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagac 156  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  40244395 agatcaaagagttaaaattaacaaaattaataaggtctacgatggaccacttttaagtttggtccaccatagac 40244322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 3209873 - 3209943
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccata 153  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| | | |||||||||||||||||||    
T  3209873 agatcaaatggttaaaattaacaaaattaataaggtttacgatggactatttttaaggttggtccaccata 3209943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 27838118 - 27837991
Alignment:
Q  94 gttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttg 192  Q
    |||||||| ||||||||||||||||||||||||||| |||| ||||  |||||| |||||||||  |||| |||| ||||||||  |  |||||||||||    
T  27838118 gttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtctaccatagac-atttgaagtt-aagttaacagtcaggatttatttg 27838021  T
Q  193 acaatcggaggaaaaaatgagggaccaaaa 222  Q
     ||| ||||||||||  |||||||| ||||    
T  27838020 gcaaacggaggaaaaggtgagggactaaaa 27837991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 42685114 - 42685013
Alignment:
Q  56 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatag 154  Q
    |||||||||| ||||||||| ||| || ||||||||||||| |||| || ||| |||||||||| || | |||| |||||||||| ||||| ||||||||    
T  42685114 taattcaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatag 42685015  T
Q  155 ac 156  Q
    ||    
T  42685014 ac 42685013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 35372066 - 35372203
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| |||| ||||  |||||||| |||||||  |||| |||| ||||||||  |  |    
T  35372066 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtccaacatagac-atttgaagtt-aagttaacagtaag 35372163  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| | ||||||||  |||||||| ||||    
T  35372164 gatttatttggcaaacagaggaaaaggtgagggactaaaa 35372203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 38241114 - 38240992
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg 183  Q
    ||||| || ||||||||| ||||||||||||||| ||||||||||||  | || | |||||| ||||||||||  |||||||||||| |||||     ||    
T  38241114 agatcgaatggttaaaattaacaaaattaataagctctacgatggaccatttttaagttggttcaccatagac-atttggagttaaacttaacagccggg 38241016  T
Q  184 atttatttgacaatcggaggaaaa 207  Q
    ||||||||| ||| ||||||||||    
T  38241015 atttatttggcaaacggaggaaaa 38240992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 3208648 - 3208555
Alignment:
Q  130 cactcttaaggttggtccaccatag-acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||||||||||||  |   ||||| |||||| |||||| |  ||||||||||||||| ||||||||||||| ||||| |||||    
T  3208648 cactcttaaggttggtccaccataatatcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataagggatcaaaa 3208555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 7270546 - 7270467
Alignment:
Q  71 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccac 149  Q
    |||||||||||||||||||||| |||||| | || ||| |||||||| |||| | | || ||||||||||||||||||||    
T  7270546 cttttaaaacaaaagatcaaacagttaaagtcaaaaaagttaataagatctatggtagaccactcttaaggttggtccac 7270467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 21074148 - 21074279
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttgg 144  Q
    ||||||||| | |||||||| ||||||||   || |||| |||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||    
T  21074148 tagacatgcgtgattcaatggtcatctttcttaaaaaaatatcaaagggttaaaattgaaaaaattaataaggtctatggtggactatctataatgttgg 21074247  T
Q  145 tccaccatagacgttttggagttaaagttaac 176  Q
    ||||||||| || ||| || |||||| |||||    
T  21074248 tccaccatatacatttgggggttaaacttaac 21074279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 38242468 - 38242564
Alignment:
Q  130 cactcttaaggttggtccaccatagacgt-tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||||||||||||||||||||||||| |  || |||||||| |||||  |  ||||||||||| ||| | ||  ||||| ||||||||||||||||    
T  38242468 cactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggaccaaaaggt 38242564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 40892379 - 40892319
Alignment:
Q  71 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca 131  Q
    ||||||||| | |||||||||| |||||||| || ||| |||||||| |||||||||||||    
T  40892379 cttttaaaatacaagatcaaacagttaaaattaaaaaatttaataagatctacgatggaca 40892319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 50810819 - 50810879
Alignment:
Q  163 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||| ||||    
T  50810819 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaa 50810879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 50865045 - 50864985
Alignment:
Q  163 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||| ||||    
T  50865045 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaa 50864985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 53622827 - 53622748
Alignment:
Q  130 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaa 207  Q
    ||||||||||||||||||||||||||| |  ||||| |||||| |||||  || ||||||| ||| ||| ||||||||||    
T  53622827 cactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaa 53622748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 40745384 - 40745466
Alignment:
Q  95 ttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacg 177  Q
    ||||||| ||||||||||||||||||||||||| | |||| ||||||||| | || |||| ||  |||||| ||||||||||||    
T  40745384 ttaaaattaacaaaattaataaggtctacgatgaaccacttttaaggttgatacatcataaac-atttggaattaaagttaacg 40745466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 53613058 - 53612948
Alignment:
Q  106 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 204  Q
    |||||||||||||||||| ||| || ||| |||| |||||| || ||||||| ||| | |||||||||||||| |  ||||||||||| ||| | |||||    
T  53613058 aaaattaataaggtctacaatgaaccacttttaaagttggttcatcatagacattt-gaagttaaagttaacggtcgggatttatttggcaaacagagga 53612960  T
Q  205 aaaaatgaggga 216  Q
    |||  |||||||    
T  53612959 aaatgtgaggga 53612948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 26887462 - 26887595
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || |||| |||| || ||||||||| ||||||||||| || |||| ||||||||||| |||||||||   |||| |||||||||||||  |  |    
T  26887462 agatcgaatggttgaaataaataaaattaatgaggtctacgatagaccacttttaaggttggtacaccataga-tatttgaagttaaagttaaccgtcag 26887560  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggac 217  Q
     |||||||||  || | |||||||| |||||||||    
T  26887561 aatttatttgggaaacagaggaaaagatgagggac 26887595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 53624266 - 53624406
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||||||||||| || ||| || ||||||  ||||  |    
T  53624266 aaaagatcaaaaggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatatacatttggg-gttaaacctaaccgt 53624363  T
Q  180 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
     |||||||||||| ||| | ||| ||||| |||| ||||||||    
T  53624364 ctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaa 53624406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 35371132 - 35371048
Alignment:
Q  70 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccata 153  Q
    |||||| ||| |||| ||||||  |||||||| || | |||||||| | |||| | ||||| |||||||||||||||||||||||    
T  35371132 tctttttaaaaaaaaaatcaaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccata 35371048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 53194769 - 53194915
Alignment:
Q  76 aaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagtta 174  Q
    |||| |||| |||||| ||||||||| || ||||||||| | ||||| | |||||  ||| ||| ||  ||||||||||||| ||||| ||||||| |||    
T  53194769 aaaaaaaaaaatcaaatggttaaaataaa-aaaattaatgaagtctatggtggactatctataatgtgagtccaccatagacattttg-agttaaactta 53194866  T
Q  175 ac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    || ||  |||||||||||| |||   ||||||||| |||||||||||||    
T  53194867 acagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaa 53194915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 9e-39; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 325089 - 325233
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||| ||||||||||||||  |    
T  325089 aaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagac-atttagagttaaagttaacagt 325187  T
Q  180 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
      ||||||||||| ||| ||||||||||  ||||||||||||||||    
T  325188 cgggatttatttggcaaacggaggaaaacttgagggaccaaaaggt 325233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 30912088 - 30912207
Alignment:
Q  103 aacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcgga 201  Q
    |||||||||||||||||||| |||| || ||| |||||||||||||||||||||  ||| |||||||||||||||  || ||||||||||| ||| ||||    
T  30912088 aacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatattt-ggagttaaagttaacacttgggatttatttggcaaacgga 30912186  T
Q  202 ggaaaaaatgagggaccaaaa 222  Q
    | ||||  |||||||| ||||    
T  30912187 gaaaaaggtgagggactaaaa 30912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 22308667 - 22308844
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    |||||||||||||| ||||| ||||||||| ||| || |||||||| |||| | || || ||| ||||||| ||||| | |||| |||||||||||| ||    
T  22308667 tagacatgcataatccaatggtcatctttttaaaaaacagatcaaatggtttacattaaaaaatttaataatgtctatggtggaccactcttaaggtagg 22308766  T
Q  145 tccaccatagacgttttggagttaaagttaacga-tttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||  ||||| |||||| ||||| |   |||||||||||| ||| ||||| ||||  |||||||| ||||    
T  22308767 tccaccatagac-atttggggttaaacttaacaaccatggatttatttggcaaacggagcaaaatgtgagggactaaaa 22308844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 176
Target Start/End: Complemental strand, 1102859 - 1102736
Alignment:
Q  52 tgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccacc 150  Q
    |||||||| || || ||||| ||||||| |||||||||||||||| |||| || | |||||||||| |||| | ||||| |||||||||||||||| |||    
T  1102859 tgcataatccactggtcatcatttaaaa-aaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctacc 1102761  T
Q  151 atagacgttttggagttaaagttaac 176  Q
    ||||||  ||||| ||||||||||||    
T  1102760 atagac-atttggggttaaagttaac 1102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 222
Target Start/End: Original strand, 27705202 - 27705361
Alignment:
Q  65 gatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt--ttt 161  Q
    ||||||||||||| | |||| ||||||||||| |||| || || ||||||| | |||| | |||| |||| |||||||||||||||||||||| |  |||    
T  27705202 gatcatcttttaataaaaaatatcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacatcattt 27705301  T
Q  162 ggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||| |||||||||||  | || ||||||||| |||  |||||||||  |||||||||||||    
T  27705302 gga-ttaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgagggaccaaaa 27705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 324252 - 324109
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagtt-aaagttaacga 178  Q
    |||| ||||||||||||| || |||  ||||||||||||||| |||||| |||| |||| |||||||||||||||||  ||| ||||| |||||||||      
T  324252 aaaaaatcaaacggttaagattaacgcaattaataaggtctatgatggaccactattaaagttggtccaccatagac-atttagagttaaaagttaacag 324154  T
Q  179 tttggatttatttgacaatcgg-aggaaaaaatgagggaccaaaa 222  Q
    || | |||||||||| || ||| |||||||||||| |||||||||    
T  324153 ttggaatttatttgagaaacggaaggaaaaaatgaaggaccaaaa 324109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 22047897 - 22047803
Alignment:
Q  130 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||||||| |||||||||||| |  ||| |||||||| |||||     ||||||||||| ||| |||||||||||||||||||||||||    
T  22047897 cactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgagggaccaaaa 22047803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 30910990 - 30910858
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 144  Q
    ||||||||| |||||||||| |  |||||||||  ||||  |||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||    
T  30910990 tagacatgcctaattcaatggttctcttttaaagaaaaac-tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttgg 30910892  T
Q  145 tccaccatagacgt--tttggagttaaagttaac 176  Q
    ||||||| |||| |  ||||| ||||||||||||    
T  30910891 tccaccaaagacatcatttggtgttaaagttaac 30910858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 30857987 - 30857871
Alignment:
Q  106 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 204  Q
    ||||||||||||||||  ||| ||| ||| |||||||||||||| ||||||| |||   |||||||||||||  ||  ||||||||||||||  ||||||    
T  30857987 aaaattaataaggtctctgatagaccacttttaaggttggtccatcatagacatttaa-agttaaagttaactgttaagatttatttgacaaaaggagga 30857889  T
Q  205 aaaaatgagggaccaaaa 222  Q
    |||  ||| |||||||||    
T  30857888 aaatctgaaggaccaaaa 30857871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 33173862 - 33173939
Alignment:
Q  81 aaaagatcaaacggttaaaatg-aacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    |||||||||||||||||||||  || ||||||||| | ||||| | | ||| ||||||||||||||||||||||||||    
T  33173862 aaaagatcaaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccatagac 33173939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 1759971 - 1760000
Alignment:
Q  12 cagagagcggaagaggaagagagtaagaaa 41  Q
    ||||||||||||||||||||||||||||||    
T  1759971 cagagagcggaagaggaagagagtaagaaa 1760000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 20539249 - 20539290
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtcta 122  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  20539249 aaaagatcaaacggtttaaattaaaaaaattaataaggtcta 20539290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 39604068 - 39603924
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 177  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | |||| |||| |||||||||||| ||||||||| |  ||||| |||||| |||||     
T  39604068 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaaca 39603969  T
Q  178 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
     |   |||||||||| ||| ||||||||||  |||||||||||||    
T  39603968 gtcatgatttatttggcaaacggaggaaaatttgagggaccaaaa 39603924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 1010318 - 1010381
Alignment:
Q  130 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgac 194  Q
    |||||||||||||||||||||||| ||  ||||| ||||||||||||  |  |||||||||||||    
T  1010318 cactcttaaggttggtccaccatacac-atttggggttaaagttaaccgtcgggatttatttgac 1010381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 225
Target Start/End: Complemental strand, 1794661 - 1794479
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    |||||| ||||||||||||| ||||||||| ||| ||  |||||||||||| |||| || ||| ||||||||||||| | |||| |||||||||||||||    
T  1794661 tagacacgcataattcaatggtcatctttttaaaaaattgatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttgg 1794562  T
Q  145 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||||||| || |  |||||  ||||| |||||  || ||||||||||||||| | ||||||||| ||||||| ||||||||    
T  1794561 tccaccatatacatcatttgggattaaacttaaccgttaggatttatttgacaaacagaggaaaaagtgagggatcaaaaggt 1794479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 1587395 - 1587250
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgg-acactcttaaggttggtccaccatagacgttttggagtt-aaagttaacga 178  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||| || ||||||  ||| ||||| ||||||||| |    
T  1587395 aaaagatcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagac-atttagagttaaaagttaacca 1587297  T
Q  179 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    |  ||||||||||| ||| ||||||||||| ||||||||||||||||    
T  1587296 tcgggatttatttggcaaacggaggaaaaagtgagggaccaaaaggt 1587250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 6348367 - 6348223
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    ||||||||||| ||||||||| |  || |||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||  |||||| ||||| ||    
T  6348367 aaaagatcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccatagac-atttgaggttaaacttaaccat 6348269  T
Q  180 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
      | ||||||||||||| | ||||||||| ||||| ||||||||||    
T  6348268 cagaatttatttgacaaacagaggaaaaagtgaggaaccaaaaggt 6348223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 1829966 - 1829823
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagtt-aaagttaacga 178  Q
    |||| |||||| |||||| || || |||||||||||||||||||||||| |||| |||| |||||||||| ||||||  ||| ||||| |||||||||      
T  1829966 aaaaaatcaaatggttaagattaataaaattaataaggtctacgatggaccacttttaaagttggtccacgatagac-atttagagttaaaagttaacag 1829868  T
Q  179 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaag 223  Q
    |  | ||||||||||||| || |||||||| |||||||| |||||    
T  1829867 tcggaatttatttgacaaacgtaggaaaaagtgagggactaaaag 1829823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 52963778 - 52963640
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||  |||||| |||  |||||||| ||||||| ||| |||||| ||||||||||||||| ||| |||||||||||||||  |       
T  52963778 agatctaaaggttaaaactaacaaatttatgaaggtctatgatggaccacttttaaggctggtccaccatagacattt-ggagttaaagttaacagtcga 52963680  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||||||| ||||| ||||  |||||||||||||    
T  52963679 gatttatttgacaaacggagaaaaacttgagggaccaaaa 52963640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 7708704 - 7708833
Alignment:
Q  93 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 191  Q
    ||||| ||| |||||||||||||||||||| |||| | |||| |||||||||||||||||||||   ||| ||||||||||||||  || ||||||||||    
T  7708704 ggttagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccataga-tatttagagttaaagttaacacttgggatttattt 7708802  T
Q  192 gacaatcggaggaaaaaatgagggaccaaaa 222  Q
    | ||| | ||| ||||  |||||||| ||||    
T  7708803 ggcaaacagagaaaaaggtgagggactaaaa 7708833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 222
Target Start/End: Complemental strand, 13165718 - 13165566
Alignment:
Q  70 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtta 168  Q
    |||||||||| |||||||||||||||| |||| || | ||||||| | ||||| | ||||| |||||||||||||||||||||||||   |||| |||||    
T  13165718 tcttttaaaa-aaaagatcaaacggtttaaattaaaataattaatgaagtctatggtggaccactcttaaggttggtccaccataga-aatttgaagtta 13165621  T
Q  169 aagttaac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    || ||||| |    ||||||||||||||| |||||||||| |||| |||| ||||    
T  13165620 aacttaacagtcaaggatttatttgacaaacggaggaaaagatgaaggacgaaaa 13165566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 23203869 - 23203998
Alignment:
Q  93 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 191  Q
    ||||||||| ||||||||||||||||||||| || || |||| ||||||||| |||||||||||   ||| |||||||||||||   || ||||||| ||    
T  23203869 ggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccataga-tatttagagttaaagttaatacttgggatttaatt 23203967  T
Q  192 gacaatcggaggaaaaaatgagggaccaaaa 222  Q
    | ||| ||||| |||| |||| |||||||||    
T  23203968 ggcaaacggagaaaaagatgacggaccaaaa 23203998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 40792958 - 40792822
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| ||||| |||||| || |||||||||||||||||| || || |||| ||||||||||||||| ||||||  |||  |||||||||||||  |  |    
T  40792958 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccacttttaaggttggtccactatagac-atttaaagttaaagttaac--tcgg 40792862  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| ||||| ||||  |||||||||||||    
T  40792861 gatttatttggcaaacggagaaaaatctgagggaccaaaa 40792822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 53435656 - 53435732
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagac 156  Q
    |||||||||||||||||||||  | ||||||||| | ||||||| |||| ||||||||||||||||| |||||||||    
T  53435656 aaaagatcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagac 53435732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 393566 - 393684
Alignment:
Q  106 aaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggagg 203  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| ||| ||  ||| || ||||||||||| |    ||||||||||| ||| |||||     
T  393566 aaaattaataaggtctacgatggaccacttttaaggttggtccactataaac-atttagaattaaagttaacagtccgggatttatttggcaaacggaga 393664  T
Q  204 aaaaaatgagggaccaaaag 223  Q
    ||||| ||||||||||||||    
T  393665 aaaaagtgagggaccaaaag 393684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 2311163 - 2311090
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagac 156  Q
    ||||| || ||||||||| ||||| |||||||||||||||||| || |||| ||||| ||||||||||||||||    
T  2311163 agatcgaatggttaaaattaacaatattaataaggtctacgatagaccacttttaagattggtccaccatagac 2311090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 10168711 - 10168828
Alignment:
Q  107 aaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggagga 204  Q
    ||||||||||||| |||| |||||  ||| ||| ||||||||||||||||| ||| || |||||||||||| |   |||||||||||| ||| |||||||    
T  10168711 aaattaataaggtgtacggtggaccatctataatgttggtccaccatagacatttgggggttaaagttaactgtcatggatttatttggcaaacggagga 10168810  T
Q  205 aaaaatgagggaccaaaa 222  Q
    |||  |||||||| ||||    
T  10168811 aaatgtgagggactaaaa 10168828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 15449942 - 15450053
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 144  Q
    ||||||||||| ||  || ||||||||||||| | |||||| ||||| ||| |||| || || ||||||| | |||| | ||||| ||||||||||||||    
T  15449942 tagacatgcatgatctaacgatcatcttttaataaaaaagagcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttgg 15450041  T
Q  145 tccaccatagac 156  Q
    ||||| ||||||    
T  15450042 tccacgatagac 15450053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 44498709 - 44498598
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 144  Q
    ||||||||| ||||  |||| ||||||||||| | |||| |||||||||||  ||| || | |||||||| | |||| | ||||| |||||||||||||     
T  44498709 tagacatgcgtaatctaatggtcatcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttga 44498610  T
Q  145 tccaccatagac 156  Q
    ||||||||||||    
T  44498609 tccaccatagac 44498598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 52240104 - 52239963
Alignment:
Q  69 atcttttaa-aacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttgga 164  Q
    ||||||||| || |||| ||||||||||| |||| || || ||||||| | |||| | ||||| |||||||||||||||||||||||||| |  |||||     
T  52240104 atcttttaataaaaaaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcatttgg- 52240006  T
Q  165 gttaaagttaacgatttggatttatttgacaatcggaggaaaa 207  Q
    ||||||||||||  || | ||||||||| ||| ||||| ||||    
T  52240005 gttaaagttaacccttggaatttatttggcaaacggagaaaaa 52239963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 52241075 - 52241192
Alignment:
Q  96 taaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgac 194  Q
    |||||| ||||||| ||||||||||||  |||||| ||| |||||| ||||| ||||||||  ||| |||||||||||||||| |  | ||||||||| |    
T  52241075 taaaattaacaaaactaataaggtctatcatggaccacttttaaggatggtc-accatagatattt-ggagttaaagttaacggtcggaatttatttggc 52241172  T
Q  195 aatcggaggaaaaaatgagg 214  Q
    || |||||||||| ||||||    
T  52241173 aaacggaggaaaagatgagg 52241192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 53205386 - 53205528
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaac-ga 178  Q
    ||||||||||| ||||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| |||||||||||| |||  || |||||||||||       
T  53205386 aaaagatcaaagggttaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatccaccatagacatttgaga-ttaaagttaacacc 53205484  T
Q  179 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
      |||||||||||| ||| ||||||||||| |||||||| ||||    
T  53205485 catggatttatttggcaaacggaggaaaaagtgagggactaaaa 53205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 1188996 - 1188914
Alignment:
Q  140 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||| |||||||||| ||| ||  | |||||||||| |  ||||||||||| ||| ||||||||||| |||||||||||||    
T  1188996 gttggttcaccatagacatttagggttaaaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaa 1188914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 2311052 - 2310994
Alignment:
Q  164 agttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||||||  || ||||||||||| ||||||||||||||  |||||||||||||    
T  2311052 agttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaa 2310994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 13533165 - 13533277
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||||||||||||||  |||| ||||||| |||||  |    
T  13533165 aaaagatcaaatggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatagac-atttgaagttaaatttaacagt 13533262  T
Q  180 ttggatttatttgac 194  Q
     ||||||||||||||    
T  13533263 ctggatttatttgac 13533277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 44503582 - 44503724
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactctt-aaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    |||| |||||| |||| |||| ||  |||||| ||||||||||| |||||  |||  || |||||| |||||||||| ||| ||  | |||||||||| |    
T  44503582 aaaaaatcaaatggtttaaattaagcaaattattaaggtctacggtggaccatctacaatgttggttcaccatagacatttagggttaaaagttaacggt 44503681  T
Q  180 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
      ||||||||||| ||| | ||||||||| |||||||||||||    
T  44503682 cgggatttatttggcaaacagaggaaaaagtgagggaccaaaa 44503724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 27850819 - 27850916
Alignment:
Q  61 caatgatcatcttttaaaacaaaaga-tcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    |||||||| || ||||||| |||||| |||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||||||||||||||||||||    
T  27850819 caatgatcctcctttaaaaaaaaagaatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagac 27850916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 2312383 - 2312522
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 177  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | ||||| ||| ||||| |||||||||||||||| |  ||||| |||||| ||||||    
T  2312383 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacg 2312482  T
Q  178 atttggatttatttgacaatcggaggaaaaaatgagggac 217  Q
     |   |||||||||| ||| ||||||||||| ||||||||    
T  2312483 gtcatgatttatttggcaaacggaggaaaaagtgagggac 2312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 7053425 - 7053321
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    ||||||||||| ||  || |||| |||||||| | ||||||||||||| || |||| || |||||||||| | |||| | |||| |||||||||| ||||    
T  7053425 tagacatgcatgatctaacgatcctcttttaataaaaaagatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattgg 7053326  T
Q  145 tccac 149  Q
    |||||    
T  7053325 tccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 42810115 - 42810243
Alignment:
Q  90 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggattta 188  Q
    ||||||| |||| || ||| ||||||||||||| | ||||| ||||||||| ||||| |||||||||| | | || |||||| |||||     |||||||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatctgggggttaaacttaacaccaaggattta 42810214  T
Q  189 tttgacaatcggaggaaaaaatgagggac 217  Q
    |||| ||| ||||||||||  ||||||||    
T  42810215 tttggcaaacggaggaaaatgtgagggac 42810243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 53432275 - 53432199
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatg-gacactcttaaggttggtccaccatagac 156  Q
    |||||||||||||||||||||  | |||||||||||||| || | || | ||||||||| |||||| ||||||||||    
T  53432275 aaaagatcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccatagac 53432199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 56085560 - 56085465
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac 176  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||||||| |||||||||||||  ||||| ||||||||||||    
T  56085560 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccatagac-atttggggttaaagttaac 56085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 4871680 - 4871610
Alignment:
Q  108 aattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacg 177  Q
    |||||||| | |||||| ||||| |||||| ||||||||||||||||||| |||  | |||||||||||||    
T  4871680 aattaataggatctacggtggaccactctttaggttggtccaccatagacatttgagggttaaagttaacg 4871610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 390328 - 390288
Alignment:
Q  182 ggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||| ||| |||||||| ||||||||||||||||    
T  390328 ggatttatttggcaaacggaggaagaaatgagggaccaaaa 390288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 1831268 - 1831308
Alignment:
Q  182 ggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  1831268 ggatttatttgaaaaatggaggaaaaaatgagggaccaaaa 1831308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 4714233 - 4714157
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    ||||||||||| |||||||||  | || |||||| | ||||| | ||||| ||||||||||||| ||||||||||||    
T  4714233 aaaagatcaaatggttaaaatttaaaatattaatgaagtctatggtggaccactcttaaggttgatccaccatagac 4714157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 10167536 - 10167496
Alignment:
Q  182 ggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||| |||||||||| ||||||||| ||||    
T  10167536 ggatttatttgacaaacggaggaaaatatgagggactaaaa 10167496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 23201973 - 23201917
Alignment:
Q  166 ttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||| |||||| || ||||||||||| ||| ||||||||||  |||||||||||||    
T  23201973 ttaaacttaacggttgggatttatttggcaaacggaggaaaaggtgagggaccaaaa 23201917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 31965946 - 31965906
Alignment:
Q  182 ggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||| ||| ||||||||||| |||||||||||||    
T  31965946 ggatttatttggcaaacggaggaaaaagtgagggaccaaaa 31965906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 42871206 - 42871166
Alignment:
Q  182 ggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||| ||| ||||||||||| |||||||||||||    
T  42871206 ggatttatttggcaaacggaggaaaaagtgagggaccaaaa 42871166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 56000532 - 56000448
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac 130  Q
    ||||||| || ||| ||| |||| |||||| || ||||| |||||| ||||||||| || ||| ||| ||||||||||| |||||    
T  56000532 tagacatacacaatccaacgatcctctttttaatcaaaatatcaaatggttaaaattaaaaaacttagtaaggtctacggtggac 56000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 222
Target Start/End: Complemental strand, 47454557 - 47454408
Alignment:
Q  73 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaag 171  Q
    ||||||| |||| |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||| |||||||||    
T  47454557 tttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagac-atttagagttaaag 47454459  T
Q  172 ttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||   |  ||||||||||| ||| || || ||||  |||||||||||||    
T  47454458 ttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaa 47454408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 41079751 - 41079880
Alignment:
Q  93 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 191  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||| |||| |||||||||||   ||||||||||||||||||| |  ||||||||||    
T  41079751 ggttaaaatcaacaaaattaataaggtctacgatggaccacttttaatgttgttccaccataga-tatttggagttaaagttaacggtagggatttattt 41079849  T
Q  192 gacaatcggaggaaaaaatgagggaccaaaa 222  Q
      ||| |||||||||| || |||||||||||    
T  41079850 agcaaacggaggaaaagataagggaccaaaa 41079880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 32256304 - 32256443
Alignment:
Q  85 gatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg 183  Q
    |||| |||||||||||| |||||||| | |||||| ||| |||||| ||| |||| ||||||||||||||||| ||| | |||||||||||||| || |     
T  32256304 gatcgaacggttaaaattaacaaaat-attaaggtttacaatggaccacttttaatgttggtccaccatagacattt-gaagttaaagttaacggttgga 32256401  T
Q  184 atttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||||||| |||  |||||||||| ||||||||||||||||    
T  32256402 atttatttggcaaatggaggaaaaagtgagggaccaaaaggt 32256443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 11501389 - 11501251
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||  |||| |||||||||||||  |  |    
T  11501389 agatcgaatggttaaaattaacaaaattaataaggtctacaatgaaccacttttaaggttggtccaccatagac-atttgaagttaaagttaacagtcgg 11501291  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| |||  |||||||||  |||||||| ||||    
T  11501290 gatttatttggcaaatggaggaaaaggtgagggactaaaa 11501251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 22691190 - 22691116
Alignment:
Q  73 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtc 146  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||    
T  22691190 tttaaaacaaaagatcaaacggttaaaataaacaaaatttataaggtatacgatggaccactcttaagattggtc 22691116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 47059357 - 47059179
Alignment:
Q  49 acatgcataattcaatgatcatcttttaaaacaaa-agatcaaacggttaaaatgaacaaaa--ttaataaggtctacgatggac-actcttaaggttgg 144  Q
    |||||| |||| ||||| ||||| ||| ||| ||| ||||||||||||| |||| || ||||  ||||||||||||| | ||| | |||||||||||||     
T  47059357 acatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggctactcttaaggttgc 47059258  T
Q  145 tccaccatagacgttttggag--ttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||||| ||||||||  ||||| |||||| |  ||||||||||| ||| ||||||||||| ||||||| |||||    
T  47059257 tccaccatagac-ttttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaa 47059179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 6173356 - 6173495
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    |||| ||||||| ||||| || |||||||||| ||||||||||||||||| ||| |||| |||||||||| |||||  ||| | ||||||||||||  |     
T  6173356 aaaaaatcaaacagttaagattaacaaaatta-taaggtctacgatggaccacttttaaagttggtccactatagatatttag-agttaaagttaat-ag 6173452  T
Q  180 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
     |||||||||||| ||| ||||||||||| |||||||||||||    
T  6173453 atggatttatttggcaaacggaggaaaaagtgagggaccaaaa 6173495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 22337288 - 22337401
Alignment:
Q  94 gttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttg 192  Q
    |||||||| |||||||||||||||||||||| || || ||  ||||||||||||||||||||||  |||| ||||||| |||||| |  |||||||||||    
T  22337288 gttaaaattaacaaaattaataaggtctacggtgtactacatttaaggttggtccaccatagac-atttgaagttaaatttaacggtcaggatttatttg 22337386  T
Q  193 acaatcggaggaaaa 207  Q
     ||| ||||||||||    
T  22337387 gcaaacggaggaaaa 22337401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 43459664 - 43459531
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| | || | ||||||||| ||||||||||||  |||||||||||| |||||          
T  43459664 agatcgaatggttaaaattaacaaaattaataaggtctacgatgtaccatttttaaggttgatccaccatagac-atttggagttaaacttaacagccga 43459566  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggac 217  Q
    |||||||||| ||| |||||||||| |||||||||    
T  43459565 gatttatttggcaaacggaggaaaacatgagggac 43459531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 32255204 - 32255060
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 177  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||||||||||| || |  ||||| |||||| |||||     
T  32255204 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaacc 32255105  T
Q  178 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
     |  ||||||||||| ||| ||||||||||| ||||||| |||||    
T  32255104 gtcgggatttatttggcaaacggaggaaaaagtgagggatcaaaa 32255060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 3413779 - 3413669
Alignment:
Q  47 agacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggt 145  Q
    ||||| ||||||||||||||| ||||||| |   || ||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||||||| ||| |    
T  3413779 agacacgcataattcaatgatgatctttttagcaaacagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgat 3413680  T
Q  146 ccaccatagac 156  Q
    |||||||||||    
T  3413679 ccaccatagac 3413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 22538769 - 22538893
Alignment:
Q  98 aaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaa 196  Q
    |||| |||||||||||| ||||||||||| || | || |||| |||||| |||||||||   ||||||||||||||||||  |   |||||||||| |||    
T  22538769 aaataaacaaaattaatgaggtctacgatagaccgcttttaatgttggtacaccataga-tatttggagttaaagttaaccgtcgagatttatttggcaa 22538867  T
Q  197 tcggaggaaaaaatgagggaccaaaa 222  Q
     |||||||||| ||||||||| ||||    
T  22538868 acggaggaaaagatgagggactaaaa 22538893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 40812542 - 40812658
Alignment:
Q  106 aaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 204  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||| |    |||||||||||||| |||  |  |||| |||||||||| | |||||    
T  40812542 aaaattaataagatctacgatggatcacttttaaggttggtccaccat-ggttatttggagttaaagtaaacagtcgggatatatttgacaaacagagga 40812640  T
Q  205 aaaaatgagggaccaaaa 222  Q
    ||| |||||||| |||||    
T  40812641 aaatatgagggagcaaaa 40812658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 40811546 - 40811458
Alignment:
Q  69 atcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    ||||||||| | |||||||||||||||| |||| || || |||||||   |||| | ||||| ||||||||||||||||||||||||||    
T  40811546 atcttttaataaaaaagatcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagac 40811458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 43460725 - 43460868
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt-tttggagttaaagttaacga 178  Q
    ||||||||||| |||| |||| || | |||||||| | |||| | ||||| |||||||| ||||||||||||||||| |  || |||||||| |||||      
T  43460725 aaaagatcaaagggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactg 43460824  T
Q  179 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |  ||||||||||| |||  |||||||||| |||||||| ||||    
T  43460825 tgaggatttatttggcaaatggaggaaaaagtgagggactaaaa 43460868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 9662141 - 9662253
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||||||||||||||  |||| ||||||| |||||  |    
T  9662141 aaaagatcaaatggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatagac-atttgaagttaaatttaacagt 9662238  T
Q  180 ttggatttatttgac 194  Q
     ||||||||||||||    
T  9662239 ctggatttatttgac 9662253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 44554687 - 44554764
Alignment:
Q  97 aaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaa 175  Q
    ||||| ||||||||||||||| |||||| |||||  |  ||| |||||||||||||||||  |||||||||||||||||    
T  44554687 aaaattaacaaaattaataagatctacggtggaccattataatgttggtccaccatagac-atttggagttaaagttaa 44554764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 669292 - 669387
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacg 177  Q
    |||||||||||||||| |||| ||||||||||||| | |||| | |||| ||||||||| | |||||||||||||||  ||||  |||||||||||||    
T  669292 aaaagatcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaa-gatggtccaccatagac-atttgaggttaaagttaacg 669387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 30333395 - 30333355
Alignment:
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaag 223  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaag 30333355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 33096980 - 33096937
Alignment:
Q  182 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||    
T  33096980 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggt 33096937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 40508618 - 40508515
Alignment:
Q  55 ataattcaatgatcat-cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccat 152  Q
    ||||| |||||||||| ||||||||| || | ||||||||||||||||  | ||||||||| |  |||| | ||||| ||||||||| ||| ||||||||    
T  40508618 ataatccaatgatcattcttttaaaaaaacatatcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccat 40508519  T
Q  153 agac 156  Q
    ||||    
T  40508518 agac 40508515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 47060354 - 47060520
Alignment:
Q  56 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatag 154  Q
    |||||||||| ||||| ||| ||| || | |||||||| ||||| |  | ||| ||||||||||||| | ||||| | |||||||||||||||||||||     
T  47060354 taattcaatggtcatccttttaaaaaacaaatcaaacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccatat 47060453  T
Q  155 acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||  ||||| |||||| |||||  |  ||||||||||| ||| ||||  |||   |||||||||||||    
T  47060454 ac-atttggtgttaaacttaacagtccggatttatttggcaaacggaaaaaagggtgagggaccaaaa 47060520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 35295909 - 35295816
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacg 177  Q
    ||||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||||||||| |||   ||||| |||||||||||||    
T  35295909 agatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccacaga-tatttggggttaaagttaacg 35295816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 4299951 - 4300031
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttt 160  Q
    ||||||||||||||| |||||  | ||||||||| | ||||| | ||| | ||||||||||||| ||||| ||||||||||    
T  4299951 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtctatggtgggccactcttaaggttgatccactatagacgttt 4300031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 13564150 - 13564284
Alignment:
Q  90 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgtt--ttggagttaaagttaacgatttggatt 186  Q
    ||||||| |||| || | |||||||| | |||| | ||||| |||||||||| || |||||||||||| ||  |||| |||||| |||||| |  |||||    
T  13564150 aacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaacg-tcgggatt 13564248  T
Q  187 tatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||| ||| ||||||||||  |||||||| ||||    
T  13564249 tatttggcaaacggaggaaaatgtgagggactaaaa 13564284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 22115067 - 22115143
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    |||||||||||| || |||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||| ||||||    
T  22115067 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagac 22115143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 40509637 - 40509713
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    |||||||||||| || |||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||| ||||||    
T  40509637 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagac 40509713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 42100013 - 42100151
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||  |||| |||||||||||||  |  |    
T  42100013 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagac-atttgaagttaaagttaacagtcgg 42100111  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    || ||||||| ||| |||||||||| |||||||| |||||    
T  42100112 gaattatttggcaaacggaggaaaatatgagggatcaaaa 42100151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 41629908 - 41629779
Alignment:
Q  93 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 191  Q
    ||||||||| ||||||||||||||||| ||||||| | |||| ||||||||||| |||||||||| |||||||||| ||||||||| |  ||||||||||    
T  41629908 ggttaaaattaacaaaattaataaggtatacgatgaaccacttttaaggttggttcaccatagac-ttttggagttcaagttaacggtcgggatttattt 41629810  T
Q  192 gacaatcggaggaaaaaatgagggaccaaaa 222  Q
    | ||| |||| |||||  ||||||| |||||    
T  41629809 ggcaaacggaagaaaacttgagggatcaaaa 41629779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 32694039 - 32693902
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgat-ggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    |||||||||||||||||| || ||||||||||||||||| ||| || |||| |||||||||||||| |||| ||  |||  |||||||||||||  || |    
T  32694039 agatcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcatatac-atttaaagttaaagttaactgttgg 32693941  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaa 221  Q
    |||||||||| ||| ||||||||||  ||| ||||||||    
T  32693940 gatttatttggcaaacggaggaaaatctgaaggaccaaa 32693902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 32798434 - 32798580
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgtt-ttggagttaaagttaacga 178  Q
    |||||||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||| |||||||||||| |  || |||||||| |||||      
T  32798434 aaaagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccg 32798533  T
Q  179 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    |  ||||||||||||||| ||||| ||||| |||||||| |||||||    
T  32798534 tgaggatttatttgacaaacggagaaaaaattgagggactaaaaggt 32798580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 22551254 - 22551077
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    |||||||||| ||||||||  ||||||||| ||| || ||||||||||||| |||| |  ||| |||||||||| || | |||| |||| |||||||| |    
T  22551254 tagacatgcaaaattcaattgtcatctttttaaaaaacagatcaaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttg 22551155  T
Q  145 tccaccatagacgttttggagttaaagttaacgat-ttggatttatttgacaatcggaggaaaaaatgagggaccaaaag 223  Q
    ||||||||||| | ||||| |||||| ||||| ||   ||||||||||| |||  ||| |||||| ||||||||||||||    
T  22551154 tccaccataga-gatttggggttaaacttaacaatccaggatttatttggcaaatgga-gaaaaagtgagggaccaaaag 22551077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 30786888 - 30786747
Alignment:
Q  83 aagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagtt--aaagttaacgat 179  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||| |||| |||| |||| ||||||||||||  ||| |||||  |||||||||  |    
T  30786888 aagatcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagac-atttagagttaaaaagttaacagt 30786790  T
Q  180 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
      | ||||||||| ||| ||||| ||||| ||||||| |||||    
T  30786789 cggaatttatttggcaaacggagaaaaaagtgagggatcaaaa 30786747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 42871060 - 42870952
Alignment:
Q  49 acatgcataattcaatgatcatc-ttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtc 146  Q
    |||||| |||||||||| ||||| |||||||||| | |||||||||||| |||| |  ||| ||||||||||||||| |||| |||||||||| ||||||    
T  42871060 acatgcgtaattcaatggtcatccttttaaaacaca-gatcaaacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtc 42870962  T
Q  147 caccatagac 156  Q
    ||| ||||||    
T  42870961 cacaatagac 42870952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 13116539 - 13116416
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||| ||||| ||||||||||||| |||||| ||| |||||| |  ||||||  ||||||||||||||||||  |  |    
T  13116539 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattatagac-atttggagttaaagttaacagtcgg 13116441  T
Q  183 gatttatttgacaatcggaggaaaa 207  Q
    |||||||||| ||| ||||||||||    
T  13116440 gatttatttggcaaacggaggaaaa 13116416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 32797350 - 32797257
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacg 177  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| | || | ||||||||| |||| |||||||  |||||||||||| ||||||    
T  32797350 agatcgaatggttaaaattaacaaaattaataaggtctacgatgaaccatttttaaggttgatccatcatagac-atttggagttaaacttaacg 32797257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 207
Target Start/End: Original strand, 45281056 - 45281219
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 144  Q
    ||||||||||| ||  || | ||||||||||| | |||||||||||||||| |||| || || ||||||| | | || | | ||| ||||||||||||||    
T  45281056 tagacatgcatgatctaacgttcatcttttaataaaaaagatcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttgg 45281155  T
Q  145 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaa 207  Q
    |||||| ||||| |  |||||| |||||||||||  || ||||||||||| |||  |||||||||    
T  45281156 tccaccgtagacatcatttgga-ttaaagttaactgttgggatttatttggcaaatggaggaaaa 45281219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 28420159 - 28420219
Alignment:
Q  163 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||  |||| |||||||||||||| |||||||||||||||||||| ||||    
T  28420159 gagttaaagttaacagtttgagatttatttgacaaacggaggaaaaaatgagggactaaaa 28420219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 42872143 - 42872234
Alignment:
Q  130 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||||| ||||||||| |||  | ||||||||||||  |  ||||||||||||||| ||||||||||| ||| |||| ||||    
T  42872143 cactcttaaggttggtctaccatagacatttgag-gttaaagttaaccgtcaggatttatttgacaaacggaggaaaaagtgaaggactaaaa 42872234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 14840767 - 14840878
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    |||||| ||||||||||||| ||||||||| | | || | ||||||||||| |||| || ||| ||||||||  ||| | |||| |||| |||| |||||    
T  14840767 tagacacgcataattcaatggtcatctttttagaaaacatatcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttgg 14840866  T
Q  145 tccaccatagac 156  Q
    ||||||||||||    
T  14840867 tccaccatagac 14840878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 24192555 - 24192661
Alignment:
Q  70 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtta 168  Q
    |||||||| | |||| |||||||||||  ||| || | |||||||| | |||| | ||||| |||||||||||||||||||||||||| ||| || ||||    
T  24192555 tcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacatttagg-gtta 24192653  T
Q  169 aagttaac 176  Q
    ||||||||    
T  24192654 aagttaac 24192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 24305266 - 24305160
Alignment:
Q  70 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagtta 168  Q
    ||||||||||||||||||||||  ||| || |  | |||||||||| | |||| ||| || ||||||||| ||||||||||||||||| ||| || ||||    
T  24305266 tcttttaaaacaaaagatcaaatagttgaagtttaaaaaattaataggatctaagatagatcactcttaatgttggtccaccatagacatttagg-gtta 24305168  T
Q  169 aagttaac 176  Q
    ||||||||    
T  24305167 aagttaac 24305160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 45279889 - 45279751
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| |||||||||| ||||||||||||| || |||| |||||  |||||||||||| ||  ||| ||||||||||||||  |  |    
T  45279889 agatcgaatggttaaaattaacaaaattattaaggtctacgatagaccacttttaagactggtccaccatatac-atttagagttaaagttaaccgtcgg 45279791  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| || |  ||||  |||||||||||||    
T  45279790 gatttatttgccaaacgaaaaaaaacttgagggaccaaaa 45279751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 9854772 - 9854879
Alignment:
Q  70 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtta 168  Q
    |||||||||| |||| |||||| |||| |||| |  | |||||||| | |||| | ||||| |||||||| ||||||||||||||||| ||| || ||||    
T  9854772 tcttttaaaaaaaaa-atcaaatggtttaaattagaagaattaataggatctatggtggaccactcttaaagttggtccaccatagacatttgggggtta 9854870  T
Q  169 aagttaacg 177  Q
    |||||||||    
T  9854871 aagttaacg 9854879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 6398503 - 6398542
Alignment:
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  6398503 gatttatttgacaaacggaggaaaaaatgagggactaaaa 6398542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 44076267 - 44076409
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatt 180  Q
    |||||||| |||| |||| || |||||||||||| | || | |||| || | |||| |||| |||||||||||| |  ||||| |||||| |||||  |     
T  44076267 agatcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgta 44076366  T
Q  181 tggatttatttgacaatcggaggaaaaaatgagggaccaaaag 223  Q
     ||||||||||| ||| ||||||||||| ||||| ||||||||    
T  44076367 gggatttatttggcaaacggaggaaaaattgaggcaccaaaag 44076409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 28418937 - 28418877
Alignment:
Q  163 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||  |||| |||||||||| ||| ||||||||||| |||||||| ||||    
T  28418937 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaa 28418877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 29103599 - 29103563
Alignment:
Q  181 tggatttatttgacaatcggaggaaaaaatgagggac 217  Q
    |||||||||||  ||||||||||||||||||||||||    
T  29103599 tggatttatttagcaatcggaggaaaaaatgagggac 29103563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 34617066 - 34617150
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac 130  Q
    |||||||||| ||| ||| |||| |||||| ||  |||| |||||| ||||||||| || ||| ||| ||||||||||| |||||    
T  34617066 tagacatgcagaatccaacgatcctctttttaactaaaatatcaaatggttaaaattaaaaaatttagtaaggtctacggtggac 34617150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 225
Target Start/End: Original strand, 125098 - 125281
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaatt-aataaggtctacgatggac-actcttaaggttg 143  Q
    |||||| ||||||| ||||| ||||||||| ||| ||  ||||||| |||| |||| || |||||| ||||||||||| | ||||| ||| |||||||||    
T  125098 tagacacgcataatccaatggtcatctttttaaaaaactgatcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttg 125197  T
Q  144 gtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||| |||| || |  ||||| |||||| |||||  || ||||||||||| ||| ||||||||||| ||||||||||||||||    
T  125198 gtccatcatatacatcatttggggttaaacttaaccgttaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggt 125281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 222
Target Start/End: Complemental strand, 124215 - 124040
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 144  Q
    |||||||||||||| | ||| | ||||||| ||| || |||||||||| || |||| |||||  |||||| | |||| | ||||| ||||||||||||||    
T  124215 tagacatgcataatcctatggttatctttttaaaaaatagatcaaacgatttaaattaacaat-ttaatacgatctatggtggaccactcttaaggttgg 124117  T
Q  145 tccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||||   ||||| |||||| |||||  |  ||||||||||| ||| | ||||||||| |||||||||||||    
T  124116 tccaccataga-tatttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggaccaaaa 124040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 34513421 - 34513529
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    |||||| ||||||| ||||||||||||||| ||| || ||||||||||||| |||| || ||||||||||||||||| | |||| |||||||||||||||    
T  34513421 tagacacgcataatccaatgatcatctttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttgg 34513520  T
Q  145 tccaccata 153  Q
    || ||||||    
T  34513521 tcaaccata 34513529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 32470482 - 32470612
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| || | ||||||||  ||||||||||||  |||||||||||| |||||     |    
T  32470482 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccatttttaaggtttatccaccatagac-atttggagttaaacttaacagccgg 32470580  T
Q  183 gatttatttgacaatcggaggaaaaaatgagg 214  Q
    |||||||||||||| |||||||||| ||||||    
T  32470581 gatttatttgacaaacggaggaaaacatgagg 32470612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 1083197 - 1083059
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||| || || |||| ||||||||| |||||||||||   ||| ||||||||||||||  || |    
T  1083197 agatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccataga-tatttagagttaaagttaacacttgg 1083099  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||| ||| ||| ||||| |||| |||| |||||||||    
T  1083098 gatttaattggcaaacggagaaaaagatgacggaccaaaa 1083059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 17460613 - 17460729
Alignment:
Q  106 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 204  Q
    ||||||||||||||||||||| ||| ||| ||||| |||||||||||||||| |||   |||||||||||||| |  |||||||||||  || |||||||    
T  17460613 aaaattaataaggtctacgatagaccacttttaagattggtccaccatagacatttaa-agttaaagttaacggtcgggatttatttgggaaacggagga 17460711  T
Q  205 aaaaatgagggaccaaaa 222  Q
    |||  |||||||||||||    
T  17460712 aaatttgagggaccaaaa 17460729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 28562713 - 28562857
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 179  Q
    ||||||||||| |||||||||    ||| ||||||||||||| | |||||  ||| ||| |||||||||||||| |  ||| ||| ||||| |||||  |    
T  28562713 aaaagatcaaagggttaaaattggaaaatttaataaggtctatggtggactatctataatgttggtccaccatatatatttggga-ttaaacttaacagt 28562811  T
Q  180 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
     |||||||||||||||| ||||||||||| ||||||||||||||||    
T  28562812 ctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggt 28562857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 43033319 - 43033150
Alignment:
Q  56 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatag 154  Q
    |||| ||||| || ||||||| || ||| ||||| | |||| |||| || | |||||||| ||| || | ||||| |||||||||||||||| |||||||    
T  43033319 taatccaatggtcctcttttagaagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatag 43033220  T
Q  155 acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    || |||  | |||||| |||||     ||||||||||| ||| ||||||||||| ||||||||||||||||    
T  43033219 acatttgag-gttaaacttaacatcgaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggt 43033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 6028926 - 6028834
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaac 176  Q
    ||||| || ||||||||| |||||||||| |||||||||||||||| |||| |||||  |||||||||||| ||  ||| ||||||||||||||    
T  6028926 agatcgaatggttaaaattaacaaaattattaaggtctacgatggaccacttttaagactggtccaccatatac-atttagagttaaagttaac 6028834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 11317320 - 11317413
Alignment:
Q  130 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||||| ||||||||| |  || |||||||| |||||  |  ||||||||||| ||| ||||||||||| |||||||||||||    
T  11317320 cactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattgagggaccaaaa 11317413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 6030337 - 6030515
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 144  Q
    ||||||||||| ||  || | ||||||||||| | |||||||||||||||| |||| || || ||||||| | |||| | | || |||||||||||||||    
T  6030337 tagacatgcatgatataacgttcatcttttaataaaaaagatcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttgg 6030436  T
Q  145 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||| ||||| |  ||||| ||||||||||||  ||  |||||||||| |||   |||||||| |||| ||| |||||    
T  6030437 tccaccgtagacatcatttgg-gttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatcaaaa 6030515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 6032217 - 6032347
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-ca-ctcttaaggttggtccaccatagacgttttggagttaaagttaacga 178  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||||||| ||  |||| | ||||||| |||||||||  |||| ||||||||||||||     
T  6032217 aaaagatcaaacggctaaaattaattaaattaataaggtctacgatggatcatgtctt-atgttggtcaaccatagac-atttgaagttaaagttaacgg 6032314  T
Q  179 t-ttggatttatttgacaatcggaggaaaaaat 210  Q
    |  |||||||||||| ||| | |||||||||||    
T  6032315 tcatggatttatttggcaaacagaggaaaaaat 6032347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 29219595 - 29219456
Alignment:
Q  86 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttg 182  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||| |||||||||||||||| |  ||||| |||||| |||||  || |    
T  29219595 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29219496  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| ||||||||||  |||||||| ||||    
T  29219495 gatttatttggcaaacggaggaaaaggtgagggactaaaa 29219456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 29332894 - 29332755
Alignment:
Q  86 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttg 182  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||| |||||||||||||||| |  ||||| |||||| |||||  || |    
T  29332894 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29332795  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| ||||||||||  |||||||| ||||    
T  29332794 gatttatttggcaaacggaggaaaaggtgagggactaaaa 29332755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 43034477 - 43034519
Alignment:
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  43034477 gatttatttgacaaacggaggaaaaagtgagggaccaaaaggt 43034519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 11316120 - 11316009
Alignment:
Q  106 aaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 204  Q
    ||||||||||||||||||| |||| || | ||||||||| ||||||||||||  |||||| ||||| |||||     ||||||||||| ||| |||||||    
T  11316120 aaaattaataaggtctacggtggaccatttttaaggttgatccaccatagac-atttggaattaaacttaacagccgggatttatttggcaaacggagga 11316022  T
Q  205 aaaaatgagggac 217  Q
    |||  ||||||||    
T  11316021 aaacctgagggac 11316009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 32469313 - 32469218
Alignment:
Q  130 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggt 225  Q
    ||||||||| |||||||||||||| || |  || |||||||| ||||| ||  ||||||||||| ||| ||||||||||| ||| ||||||||||||    
T  32469313 cactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggatttatttggcaa-cggaggaaaaagtgaaggaccaaaaggt 32469218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 42641752 - 42641839
Alignment:
Q  70 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    |||||||||| |||||||||||| ||| |||| || | |||||||| | |||| | | ||| |||||||||||||| |||||||||||    
T  42641752 tcttttaaaaaaaaagatcaaacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagac 42641839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 18616907 - 18617051
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 177  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||| |||||  ||||||||||||||| |  ||||| |||||| ||||      
T  18616907 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaata 18617006  T
Q  178 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
     || ||||||||||| ||| ||||||||||  |||||||| ||||    
T  18617007 gttgggatttatttggcaaacggaggaaaaggtgagggactaaaa 18617051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 11547824 - 11547737
Alignment:
Q  130 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgaggg 215  Q
    ||||| |||||||||||||  |||||| |  ||||| |||||| |||||  |  ||||||||||||||| || |||||||||||||||    
T  11547824 cactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtcaggatttatttgacaaacgaaggaaaaaatgaggg 11547737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 12095483 - 12095439
Alignment:
Q  87 tcaaacggttaaaatgaacaaaattaataaggtctacgatggaca 131  Q
    |||||| |||||||| || ||| ||||||||||||||||||||||    
T  12095483 tcaaacagttaaaattaaaaaatttaataaggtctacgatggaca 12095439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 222
Target Start/End: Original strand, 23397270 - 23397399
Alignment:
Q  93 ggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 191  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||  |||| ||||||| |||||| |  ||||||||||    
T  23397270 ggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagac-atttgaagttaaatttaacggtcgggatttattt 23397368  T
Q  192 gacaatcggaggaaaaaatgagggaccaaaa 222  Q
    | ||| ||||||||||  |||||||| ||||    
T  23397369 ggcaaacggaggaaaaggtgagggactaaaa 23397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 29380400 - 29380262
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||  |||| ||||||| |||||| |  |    
T  29380400 agatcgaatggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccatatac-atttgaagttaaaattaacggtcgg 29380302  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| |||| |||||  |||||||| ||||    
T  29380301 gatttatttggcaaacggaagaaaaggtgagggactaaaa 29380262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 17839046 - 17839184
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||| ||| ||||||||  ||||||||  ||  |||| ||||||| |||||| |  |    
T  17839046 agatcgaatggttaaaattaacaaaattaataaggtctacaatggactacttttaaggttaatccaccatctac-atttgaagttaaaattaacggtcgg 17839144  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| ||||||||||  |||||||| ||||    
T  17839145 gatttatttggcaaacggaggaaaaggtgagggactaaaa 17839184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 212
Target Start/End: Complemental strand, 5186753 - 5186649
Alignment:
Q  107 aaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaa 206  Q
    |||||||||||||||||||| |||  | |||||||| || |||||||||  ||| | |||||||||||||| |  ||||||||||| ||| |||||||||    
T  5186753 aaattaataaggtctacgattgaccattttaaggtttgttcaccatagatattt-gaagttaaagttaacggtcgggatttatttggcaaacggaggaaa 5186655  T
Q  207 aaatga 212  Q
    | ||||    
T  5186654 agatga 5186649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 23392464 - 23392290
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaaaacaaaag-atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttg 143  Q
    ||||| ||||||||  |||| | ||||||||||| ||||  ||||||||||| |||| || | |||||||| | |||| | ||||| ||| |||||||||    
T  23392464 tagacttgcataatctaatggttatcttttaaaaaaaaaatatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttg 23392365  T
Q  144 gtccaccatag-acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggac 217  Q
     |||||| ||| |   ||||| |||||| |||||  || ||||||||||| ||| ||||||||||  ||||||||    
T  23392364 atccaccttagcatcatttggggttaaacttaacatttaggatttatttggcaaacggaggaaaaggtgagggac 23392290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 29381632 - 29381775
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 177  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | |||| ||||||||||||| |||||||| |||| |  ||||| |||||| |||||     
T  29381632 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaac- 29381730  T
Q  178 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
      |||||||||||||  || |||||||||| |||| |||| ||||    
T  29381731 tgttggatttatttggtaaacggaggaaaagatgaaggactaaaa 29381775  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 232305 - 232245
Alignment:
Q  163 gagttaaagttaacgatttgg-atttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||||||  ||||| ||||||||| ||| ||||||||||| |||||||| ||||    
T  232305 gagttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaa 232245  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 17837825 - 17837687
Alignment:
Q  86 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttg 182  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||| ||| ||||||||||||| |  ||||| |||||| |||||  || |    
T  17837825 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgtt-g 17837727  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    ||||||||||  || |||| ||||| ||||||||| ||||    
T  17837726 gatttatttggtaaacggaagaaaagatgagggactaaaa 17837687  T

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Target: scaffold0034 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 109652 - 109743
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaa 175  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||| ||  |||| ||||||||||||    
T  109652 agatcaaatggttaaaattaacaaaattaataaggtctacgatggactatttttaaggttggtccaccatatac-atttgaagttaaagttaa 109743  T

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Target: scaffold2071 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 556 - 652
Alignment:
Q  53 gcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtcca 148  Q
    ||||||| ||||| ||||||||| ||| || ||||||||||||| |||| || ||| ||||||||||||| | |||| |||||||||||||||||||    
T  556 gcataatccaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtcca 652  T

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Target: scaffold0077 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 52801 - 52663
Alignment:
Q  84 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 182  Q
    ||||| ||||| |||||| || |||||||||||||||||| || || || | ||||||||||||||||||| ||  |||  |||||||||||||  |  |    
T  52801 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccatttttaaggttggtccaccatatac-atttaaagttaaagttaactgtcgg 52703  T
Q  183 gatttatttgacaatcggaggaaaaaatgagggaccaaaa 222  Q
    |||||||||| ||| ||||| ||||  |||||||||||||    
T  52702 gatttatttggcaaacggagaaaaatctgagggaccaaaa 52663  T

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Target: scaffold1152 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 2404 - 2524
Alignment:
Q  106 aaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt-tttggagttaaagttaacgatttggatttatttgacaatcggagg 203  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||  || | ||||||||||||||||||  |  | |||||||||  || | ||||    
T  2404 aaaattaataaggtctacgatagaccacttttaaggttggtccaccat-tacatatttggagttaaagttaacagtcggaatttatttggaaaacagagg 2502  T
Q  204 aaaaaatgagggaccaaaaggt 225  Q
    ||||| | ||||||||||||||    
T  2503 aaaaactaagggaccaaaaggt 2524  T

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Target: scaffold0219 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 8083 - 8189
Alignment:
Q  70 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaa 169  Q
    |||||||||| |||  ||||||||||| |||| || | ||||||||   |||| ||||||| |||||||||||| ||||||||||||  ||||| |||||    
T  8083 tcttttaaaaaaaacaatcaaacggtttaaattaaaataattaatataatctatgatggaccctcttaaggttgatccaccatagac-atttggggttaa 8181  T
Q  170 agttaacg 177  Q
    | ||||||    
T  8182 aattaacg 8189  T

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Target: scaffold0201 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 21339 - 21264
Alignment:
Q  82 aaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 156  Q
    ||||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||| ||||||||||||||||||||    
T  21339 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccatagac 21264  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 32822 - 32672
Alignment:
Q  46 tagacatgcataattcaatgatcatcttttaa--aacaaaagatcaaacggttaaaatgaacaaaat--taataaggtctacgatggac-actcttaagg 140  Q
    ||||||||||| ||  |||| || ||||||||  || |||||||||||||||| |||| || ||||   ||||| | |||| ||||||| |||| |||||    
T  32822 tagacatgcatgatctaatggtcctcttttaataaaaaaaagatcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaagg 32723  T
Q  141 ttggtccaccatagacgttttggagttaaagttaacgatttggatttatttg 192  Q
    |||||||||||||||| |||  | ||||||||||||  || |||||||||||    
T  32722 ttggtccaccatagacatttaag-gttaaagttaacagttaggatttatttg 32672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 43476 - 43615
Alignment:
Q  81 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 177  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||| |||||||||||||||| |   |||| |||||| |||||     
T  43476 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaacc 43575  T
Q  178 atttggatttatttgacaatcggaggaaaaaatgagggac 217  Q
     |  ||| ||||||| ||| ||||||||||| ||||||||    
T  43576 gtcaggacttatttggcaaacggaggaaaaagtgagggac 43615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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