View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0469_high_9 (Length: 250)
Name: NF0469_high_9
Description: NF0469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0469_high_9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 25 - 250
Target Start/End: Original strand, 4712002 - 4712227
Alignment:
| Q |
25 |
acaaagctgacaaaaatgttactttgaattatgtatgccaaatggaaaacgttccaaaactttggtttttccttttatacataaaactgataagcttgaa |
124 |
Q |
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| T |
4712002 |
acaaagctgacaaaaatgttactttgaattatgtatgccaaatggaaaacgttccaaaactttggtttttccttttatacataaaactgataagcttgaa |
4712101 |
T |
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| Q |
125 |
aaagttgcaacaacacaacacaaaaagtaacttcacctttcatttactactccttatgataagctatctaaaattacatgcaaacgatataaacacaacc |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4712102 |
aaagttgcaacaacacaacacaaaaagtaacttcacctttcatttactactccttatgataagctatctaaaattacatgcaaacgatataaacacaacc |
4712201 |
T |
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| Q |
225 |
gagtcattcatgaatttataattaac |
250 |
Q |
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|||||||||||||||||||||||||| |
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| T |
4712202 |
gagtcattcatgaatttataattaac |
4712227 |
T |
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