View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0469_low_8 (Length: 310)
Name: NF0469_low_8
Description: NF0469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0469_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 88 - 229
Target Start/End: Complemental strand, 43506893 - 43506752
Alignment:
| Q |
88 |
aacctgtgaatgtgatcacagactccgaaaaactcttctattccatcacagtgtgaataattctctccactcccagcttcgctccaagggacattctctt |
187 |
Q |
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| T |
43506893 |
aacctatgaatgtgatcacagactccgaaaaactcttctattccatcacagtgtgaataattctctccactcccagcttcgctccaagggacattctctt |
43506794 |
T |
|
| Q |
188 |
agaacctctcgctgcaatttgttaaacttcttattgcaacag |
229 |
Q |
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||||||||| |||| ||||||||||||||||||||| ||||| |
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| T |
43506793 |
agaacctcttgctgtaatttgttaaacttcttattgtaacag |
43506752 |
T |
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