View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0475_low_3 (Length: 462)

Name: NF0475_low_3
Description: NF0475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0475_low_3
NF0475_low_3
[»] chr8 (25 HSPs)
chr8 (31-462)||(38453278-38453709)
chr8 (35-194)||(38633057-38633216)
chr8 (35-205)||(39848769-39848939)
chr8 (318-400)||(38633358-38633440)
chr8 (35-126)||(34539027-34539118)
chr8 (40-132)||(39848636-39848728)
chr8 (317-396)||(39849066-39849145)
chr8 (35-127)||(34533725-34533817)
chr8 (35-127)||(38632779-38632871)
chr8 (43-118)||(39848261-39848336)
chr8 (48-136)||(34549174-34549262)
chr8 (43-127)||(38632548-38632632)
chr8 (35-126)||(38453890-38453981)
chr8 (35-127)||(34533863-34533955)
chr8 (41-127)||(34916426-34916512)
chr8 (35-127)||(34544775-34544867)
chr8 (35-127)||(39848490-39848582)
chr8 (44-126)||(38632929-38633011)
chr8 (50-127)||(34533587-34533664)
chr8 (35-118)||(34916573-34916656)
chr8 (53-112)||(36951478-36951537)
chr8 (41-127)||(34916150-34916236)
chr8 (51-118)||(39848368-39848435)
chr8 (323-359)||(36951895-36951931)
chr8 (223-274)||(38633242-38633296)
[»] chr4 (4 HSPs)
chr4 (34-309)||(44474634-44474909)
chr4 (40-107)||(44474364-44474431)
chr4 (40-127)||(44474502-44474589)
chr4 (342-399)||(44475299-44475356)
[»] chr3 (2 HSPs)
chr3 (70-273)||(7045679-7045879)
chr3 (330-412)||(7045526-7045608)


Alignment Details
Target: chr8 (Bit Score: 400; Significance: 0; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 31 - 462
Target Start/End: Complemental strand, 38453709 - 38453278
Alignment:
Q  31 gatcatgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtcgac 130  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  38453709 gatcatgagttgggctaatggtgatgtttttgatggttgttggtcaaatggacttatacatggatctggagtttttagatttgcaaatggggatgtcgac 38453610  T
Q  131 attggtaacttcaggagtaaacaacttcatggcaacggaaaatacacattttcaaatggaacaatgtacgagggttgcatatgctcaaatggaaaagtga 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38453609 attggtaacttcaggagtaaacaacttcatggcaacggaaaatacacattttcaaatggaacaatgtacgagggttgcatatgctcaaatggaaaagtga 38453510  T
Q  231 tagagaaaggactgatgatatggggccttcaaaatcccgatggagattgtatatgtcctgattcctcatctggtgtgattctttctgttatcgaaaggga 330  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38453509 tagagaaaagactgatgatatgaggccttcaaaatcccgatggagattgtatatgtcctgattcctcatctggtgtgattctttctgttatcgaaatgga 38453410  T
Q  331 atatatgcaaagagttctgattgtggagaaaattagaccatattcagaagtaacacataataataagaaggaaaagcaagattagatggcaattatctga 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38453409 atatatgcaaagagttctgattgtggagaaaattagaccatattcagaagtaacacataataataagaaggaaaagcaagattagatggcgattatctga 38453310  T
Q  431 ctcttaattagcaacttggcatcaggtaaatt 462  Q
    ||||||||| ||||||||||||||||||||||    
T  38453309 ctcttaatttgcaacttggcatcaggtaaatt 38453278  T

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Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 38633057 - 38633216
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtcgacattg 134  Q
    |||| |||||||| ||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||| ||||| ||| ||| |||||||||| ||||    
T  38633057 atgacttgggctactggtgatgtcttcgatggttgttggtcaaatgggcttatacatggatctggagtttatagatatgctaatggggatgtcgatattg 38633156  T
Q  135 gtaacttcaggagtaaacaacttcatggcaacggaaaatacacattttcaaatggaacaa 194  Q
    ||||||||||||||||||  || |||| ||| |||||||||||||  ||| |||||||||    
T  38633157 gtaacttcaggagtaaacttctccatgtcaatggaaaatacacatgctcagatggaacaa 38633216  T

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Target: chr8; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 39848769 - 39848939
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtcgacattg 134  Q
    |||||||||| |  ||||||||| ||  ||||||||||||||||||| ||||||||||||| |||||||| ||||| ||| ||  |||||||||| ||||    
T  39848769 atgagttgggttgttggtgatgtcttcgatggttgttggtcaaatggacttatacatggatatggagtttatagatatgctaacggggatgtcgatattg 39848868  T
Q  135 gtaacttcaggagtaaacaacttcatggcaacggaaaatacacattttcaaatggaacaatgtacgagggt 205  Q
    ||||||||||||||||||  || |||| ||| ||||||||||||   |||||||||||||| |||||||||    
T  39848869 gtaacttcaggagtaaacttctccatgacaatggaaaatacacacactcaaatggaacaatatacgagggt 39848939  T

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Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 400
Target Start/End: Original strand, 38633358 - 38633440
Alignment:
Q  318 ttatcgaaagggaatatatgcaaagagttctgattgtggagaaaattagaccatattcagaagtaacacataataataagaag 400  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  38633358 ttatcgaaagggaatgtatgcaaggagttctaattgtggagaaaattagacagtattcagaagtaacacataataataagaag 38633440  T

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Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 34539118 - 34539027
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgt 126  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||| |||||||    
T  34539118 atgaattgggctaatggcgatgtttttaatggttgttggtcaaatggacttagacatggttctggagtttatagatttgcaaatggggatgt 34539027  T

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Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 39848636 - 39848728
Alignment:
Q  40 ttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtcgacat 132  Q
    |||||||||||||||||||||| ||||||||  ||||||||| |||| |||||||| |||||||| ||||||||||||| |||||||| ||||    
T  39848636 ttgggctaatggtgatgtttttgatggttgtatgtcaaatggacttagacatggatttggagtttatagatttgcaaatggggatgtctacat 39848728  T

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Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 317 - 396
Target Start/End: Original strand, 39849066 - 39849145
Alignment:
Q  317 gttatcgaaagggaatatatgcaaagagttctgattgtggagaaaattagaccatattcagaagtaacacataataataa 396  Q
    |||||| ||||||||||||||||| ||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  39849066 gttatcaaaagggaatatatgcaaggagttttaattgtggagaaaatcagaccgtattcagaagtaacacataataataa 39849145  T

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Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 34533817 - 34533725
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    ||||| ||||||||||||| ||||||  ||||||||||||||||||| |||| |||||||| |||||||| ||||||| ||||| ||||||||    
T  34533817 atgagatgggctaatggtgttgttttcgatggttgttggtcaaatggacttagacatggatatggagtttgtagatttacaaatggggatgtc 34533725  T

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Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 38632779 - 38632871
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    ||||||||||||| ||||||||| ||  |||||||||||||| |||| ||||||||||||| |||||||| ||||| ||||||| ||||||||    
T  38632779 atgagttgggctactggtgatgtcttcgatggttgttggtcagatggacttatacatggatttggagtttatagatctgcaaatggggatgtc 38632871  T

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Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 39848261 - 39848336
Alignment:
Q  43 ggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaat 118  Q
    ||||||||||||||||||| |||||||||||||||||| | || || |||||| ||||||||||||||||||||||    
T  39848261 ggctaatggtgatgtttttaatggttgttggtcaaatgactttgtatatggatatggagtttttagatttgcaaat 39848336  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 34549262 - 34549174
Alignment:
Q  48 atggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtcgacattggt 136  Q
    |||||||||||||| ||||||||||||| ||||| |||| |||||||| |||||||| ||||||| ||||| || ||||| ||||||||    
T  34549262 atggtgatgtttttgatggttgttggtctaatggacttacacatggatatggagtttatagattttcaaatgggaatgtctacattggt 34549174  T

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Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 38632548 - 38632632
Alignment:
Q  43 ggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||| |||||||||||||  ||||||| ||||||||    
T  38632548 ggctaatggtgatgttttggatgcttgttggtcaaatggacttctacatggatttggagtttttagagctgcaaatggggatgtc 38632632  T

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Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 38453981 - 38453890
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgt 126  Q
    ||||||||| || |||||||||||||| ||||||||||||||||| | ||| ||||||||| |||||||| ||||| || |||| |||||||    
T  38453981 atgagttggcctgatggtgatgtttttgatggttgttggtcaaatagacttgtacatggatatggagtttatagatctgtaaatggggatgt 38453890  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 34533955 - 34533863
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    |||| ||||| | |||||||||||||| ||||||||||||||||| | |||| | |||||| |||||||| ||||| ||||||| ||||||||    
T  34533955 atgaattgggttgatggtgatgtttttgatggttgttggtcaaatagacttaaagatggatatggagtttatagatatgcaaatggggatgtc 34533863  T

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Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 34916512 - 34916426
Alignment:
Q  41 tgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    |||||||| | |||||||||  |||||| |||||||||||| | || |||||||| |||||||| ||||||||||||| ||||||||    
T  34916512 tgggctaacgatgatgttttcgatggttattggtcaaatggacataaacatggatatggagtttatagatttgcaaatggggatgtc 34916426  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 34544867 - 34544775
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    |||| ||||| |||||||||||||||  |||| |||||||||||||| | || |||||||| |||||||| ||||||| ||||| || |||||    
T  34544867 atgaattgggttaatggtgatgttttcaatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc 34544775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 39848490 - 39848582
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    |||||||||| || ||| ||||| || |||||||||||||||||||| |||  |||||||| |||||||| |||||  |||||| ||||||||    
T  39848490 atgagttgggatactggagatgtcttctatggttgttggtcaaatggacttgcacatggatatggagtttatagatccgcaaatggggatgtc 39848582  T

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Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 38632929 - 38633011
Alignment:
Q  44 gctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgt 126  Q
    ||||| |||||||||||| |||||| || ||||||||| |||| | |||||| |||||||| || |||||||||| |||||||    
T  38632929 gctaacggtgatgtttttgatggttatttgtcaaatggacttagatatggatttggagtttataaatttgcaaatggggatgt 38633011  T

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Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 34533664 - 34533587
Alignment:
Q  50 ggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    |||||||||||  |||||||||||| |||||| |||| ||||||||||||||||| || || ||| ||| ||||||||    
T  34533664 ggtgatgttttcgatggttgttggtaaaatggacttaaacatggatctggagtttatacatatgctaatggggatgtc 34533587  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 34916656 - 34916573
Alignment:
Q  35 atgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaat 118  Q
    |||| ||||| |||||||| | ||||  ||||||||||||||||||| |||  |||||||| |||||||| ||||| |||||||    
T  34916656 atgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaat 34916573  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 36951478 - 36951537
Alignment:
Q  53 gatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagattt 112  Q
    ||||||||| |||||||||||| |||||| |||| ||| ||||||||||||| |||||||    
T  36951478 gatgtttttgatggttgttggttaaatggacttagacaaggatctggagtttatagattt 36951537  T

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Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 34916236 - 34916150
Alignment:
Q  41 tgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    |||||||| |||||||||||  |||||| |||||||||||| |  | |||||| | |||||||| ||||||||||||| | ||||||    
T  34916236 tgggctaacggtgatgttttcgatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtc 34916150  T

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Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 39848368 - 39848435
Alignment:
Q  51 gtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaat 118  Q
    ||||||||||| |||||||| | |||| ||  ||||||||||||| |||||||| ||||| |||||||    
T  39848368 gtgatgtttttgatggttgtcgatcaattgcgcttatacatggatttggagtttatagatatgcaaat 39848435  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 36951895 - 36951931
Alignment:
Q  323 gaaagggaatatatgcaaagagttctgattgtggaga 359  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  36951895 gaaagggaatatatgcaaggagttctaattgtggaga 36951931  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 38633242 - 38633296
Alignment:
Q  223 aaaagtgatagagaaagga---ctgatgatatggggccttcaaaatcccgatgga 274  Q
    |||||||| |||||||| |   ||||||||||||| |||||||||||||||||||    
T  38633242 aaaagtgacagagaaagaagaactgatgatatgggcccttcaaaatcccgatgga 38633296  T

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Target: chr4 (Bit Score: 180; Significance: 5e-97; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 34 - 309
Target Start/End: Original strand, 44474634 - 44474909
Alignment:
Q  34 catgagttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtcgacatt 133  Q
    |||||||||| ||||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  44474634 catgagttggactaatggtgatgtttttgaaggttgctggtcaaatggacttatacatggatctggagtttttaaatttgcaaatggggatgtcgacatt 44474733  T
Q  134 ggtaacttcaggagtaaacaacttcatggcaacggaaaatacacattttcaaatggaacaatgtacgagggttgcatatgctcaaatggaaaagtgatag 233  Q
    |||||||||||||||||||  ||| ||| |||||||| |||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||||    
T  44474734 ggtaacttcaggagtaaacttctttatgacaacggaacatacacatgttcaaatgaaacaatgtacaagggttgcatatgctcaaatgaaaaagtgatag 44474833  T
Q  234 agaaaggactgatgatatggggccttcaaaatcccgatggagattgtatatgtcctgattcctcatctggtgtgat 309  Q
    |||||||||||||||||||| |||||||||||||  |||||| |||||||| || | ||| |||||||||||||||    
T  44474834 agaaaggactgatgatatggagccttcaaaatcctaatggaggttgtatatatcataattgctcatctggtgtgat 44474909  T

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Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 44474364 - 44474431
Alignment:
Q  40 ttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagttttta 107  Q
    |||||||| ||| |||||||||  ||||| |||||||||||||||| ||||||||| |||||||||||    
T  44474364 ttgggctattggcgatgtttttattggttcttggtcaaatggccttgtacatggatttggagttttta 44474431  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 44474502 - 44474589
Alignment:
Q  40 ttgggctaatggtgatgttttttatggttgttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtc 127  Q
    ||||||||||| ||||  |||| ||||||||  ||||||||| |||| |||||||| |||||||| || ||||| |||| ||||||||    
T  44474502 ttgggctaatgatgatcattttaatggttgtctgtcaaatgggcttagacatggatttggagtttatacatttgtaaatggggatgtc 44474589  T

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Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 44475299 - 44475356
Alignment:
Q  342 gagttctgattgtggagaaaattagaccatattcagaagtaacacataataataagaa 399  Q
    ||||||| ||||||||||||||| |||  |||||| ||||||||||||| ||||||||    
T  44475299 gagttctaattgtggagaaaattcgacagtattcaaaagtaacacataaaaataagaa 44475356  T

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Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 273
Target Start/End: Complemental strand, 7045879 - 7045679
Alignment:
Q  70 ttggtcaaatggccttatacatggatctggagtttttagatttgcaaatagggatgtcgacattggtaacttcaggagtaaacaacttcatggcaacgga 169  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||| | |||||| ||||||||||||| | |||| |||  ||  ||| |||||||    
T  7045879 ttggtcaaatggacttatacatggatatggagtttttacatttgcaaatggagatgtcaacattggtaactttaagagtcaacttctctatgacaacgga 7045780  T
Q  170 aaatacacattttcaaatggaacaatgtacgagggttgcatatgctcaaatggaaaagtgatagagaaaggactgatgatatggggccttcaaaatcccg 269  Q
    || | |||||  |||||||||||||||||||| ||   ||| ||     ||| ||||||||||||||||||||| ||||||||| ||| ||||||||| |    
T  7045779 aagtgcacatggtcaaatggaacaatgtacgaagg--ccat-tgtgttgatgaaaaagtgatagagaaaggactaatgatatggagccctcaaaatcctg 7045683  T
Q  270 atgg 273  Q
    ||||    
T  7045682 atgg 7045679  T

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Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 7045608 - 7045526
Alignment:
Q  330 aatatatgcaaagagttctgattgtggagaaaattagaccatattcagaagtaacacataataataagaaggaaaagcaagat 412  Q
    ||||||||||| ||||||| |||||||||||||||| |    |||||||||||||| ||||||||| |||  |||||||||||    
T  7045608 aatatatgcaaggagttctaattgtggagaaaattaaataggattcagaagtaacatataataataggaacaaaaagcaagat 7045526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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