View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0475_low_9 (Length: 287)
Name: NF0475_low_9
Description: NF0475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0475_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 26 - 283
Target Start/End: Original strand, 39978931 - 39979188
Alignment:
| Q |
26 |
cacctaattcaccgccgattccacctccaattccaccaaaaggaagtccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctg |
125 |
Q |
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||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39978931 |
cacctaaatcaccaccgattccacctccaattccaccaaaaggaagtccattgtttcctattccagaataaccaccagcaaatgtcatgaagttcttctg |
39979030 |
T |
|
| Q |
126 |
gtccttcaaaccagcatcagttggtacatttcttgcacttgttgtagccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctc |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39979031 |
gtccttcaaaccagcatcagttggtacatttcttgcacttgttgtagccacaacaagagcaagaaccaacaacaacatacaccacttcgccatatctctc |
39979130 |
T |
|
| Q |
226 |
ccacttactaggaatatgtataataactgcactcactctcgctctccctttgtttctt |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
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| T |
39979131 |
ccacttactaggaatatgtataataactgcactcactctcactctccctttgtgtctt |
39979188 |
T |
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