View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0479_low_16 (Length: 251)

Name: NF0479_low_16
Description: NF0479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0479_low_16
NF0479_low_16
[»] chr6 (23 HSPs)
chr6 (1-241)||(7927078-7927317)
chr6 (1-139)||(7929082-7929220)
chr6 (8-89)||(17216957-17217038)
chr6 (7-83)||(5641704-5641779)
chr6 (1-53)||(29284153-29284205)
chr6 (8-83)||(1128434-1128509)
chr6 (7-74)||(9455854-9455920)
chr6 (8-89)||(6228275-6228356)
chr6 (2-79)||(19748108-19748185)
chr6 (1-62)||(20600567-20600627)
chr6 (7-79)||(6217960-6218031)
chr6 (1-36)||(6144016-6144051)
chr6 (1-36)||(9064918-9064953)
chr6 (6-41)||(19642560-19642595)
chr6 (9-88)||(30938392-30938470)
chr6 (1-36)||(33628949-33628984)
chr6 (29-62)||(6283962-6283995)
chr6 (7-88)||(8330505-8330586)
chr6 (7-40)||(12089145-12089178)
chr6 (7-36)||(26669673-26669702)
chr6 (48-88)||(7273051-7273091)
chr6 (4-36)||(17751348-17751380)
chr6 (1-41)||(32540959-32540999)
[»] chr2 (32 HSPs)
chr2 (8-89)||(42678339-42678420)
chr2 (8-83)||(3330216-3330291)
chr2 (7-84)||(31594380-31594457)
chr2 (7-70)||(33613619-33613682)
chr2 (1-41)||(44187751-44187791)
chr2 (3-43)||(44422152-44422192)
chr2 (8-83)||(1962831-1962906)
chr2 (1-36)||(29035028-29035063)
chr2 (1-36)||(32527085-32527120)
chr2 (1-36)||(34034402-34034437)
chr2 (7-41)||(10262786-10262820)
chr2 (7-53)||(11727368-11727414)
chr2 (3-53)||(17115554-17115604)
chr2 (8-74)||(17543105-17543171)
chr2 (1-39)||(20451864-20451902)
chr2 (14-88)||(24202150-24202224)
chr2 (18-88)||(36755622-36755692)
chr2 (10-83)||(6866513-6866586)
chr2 (7-36)||(30474209-30474238)
chr2 (4-53)||(36190089-36190138)
chr2 (27-88)||(36845120-36845180)
chr2 (8-89)||(40203294-40203375)
chr2 (1-41)||(2304337-2304377)
chr2 (7-39)||(4157663-4157695)
chr2 (7-35)||(5207145-5207173)
chr2 (45-97)||(14944154-14944205)
chr2 (8-88)||(20435781-20435861)
chr2 (7-39)||(20942123-20942155)
chr2 (50-90)||(30856574-30856614)
chr2 (20-88)||(31605499-31605566)
chr2 (4-40)||(36413808-36413844)
chr2 (4-36)||(40133531-40133563)
[»] chr8 (31 HSPs)
chr8 (2-79)||(43456661-43456738)
chr8 (7-74)||(10201276-10201343)
chr8 (1-36)||(38790580-38790615)
chr8 (1-79)||(43508456-43508534)
chr8 (8-89)||(1032569-1032650)
chr8 (8-89)||(3311439-3311520)
chr8 (8-89)||(36103937-36104018)
chr8 (8-89)||(41454842-41454923)
chr8 (1-41)||(31129349-31129389)
chr8 (48-88)||(40444705-40444745)
chr8 (1-36)||(2696585-2696620)
chr8 (1-36)||(2800071-2800106)
chr8 (1-36)||(7314785-7314820)
chr8 (8-83)||(8350441-8350516)
chr8 (13-88)||(13105095-13105169)
chr8 (48-83)||(18080944-18080979)
chr8 (8-79)||(38289250-38289321)
chr8 (13-68)||(39362288-39362343)
chr8 (10-88)||(11810570-11810648)
chr8 (3-41)||(33982237-33982275)
chr8 (8-89)||(4259858-4259939)
chr8 (8-41)||(13537326-13537359)
chr8 (8-41)||(13626874-13626907)
chr8 (8-89)||(41845444-41845525)
chr8 (1-89)||(1360142-1360230)
chr8 (1-41)||(10310329-10310369)
chr8 (8-36)||(16935639-16935667)
chr8 (48-88)||(31220344-31220384)
chr8 (8-88)||(39104607-39104686)
chr8 (4-36)||(39432339-39432371)
chr8 (8-40)||(45536766-45536798)
[»] chr5 (28 HSPs)
chr5 (10-83)||(7608080-7608153)
chr5 (16-81)||(87798-87863)
chr5 (7-88)||(20191442-20191522)
chr5 (7-79)||(34729481-34729552)
chr5 (8-83)||(15106902-15106977)
chr5 (1-40)||(18101957-18101996)
chr5 (8-90)||(43227864-43227946)
chr5 (7-88)||(9628117-9628198)
chr5 (13-70)||(16745102-16745159)
chr5 (8-89)||(31250146-31250227)
chr5 (8-89)||(38503272-38503353)
chr5 (8-40)||(2411309-2411341)
chr5 (1-41)||(4674823-4674863)
chr5 (1-41)||(36045142-36045182)
chr5 (1-36)||(1463923-1463958)
chr5 (1-36)||(10943768-10943803)
chr5 (7-41)||(31556865-31556899)
chr5 (7-36)||(1244741-1244770)
chr5 (8-89)||(17077360-17077441)
chr5 (7-36)||(27025443-27025472)
chr5 (7-40)||(29096322-29096355)
chr5 (7-36)||(33800945-33800974)
chr5 (13-89)||(8241053-8241128)
chr5 (8-60)||(18175235-18175287)
chr5 (4-36)||(28537187-28537219)
chr5 (48-88)||(31991816-31991856)
chr5 (1-41)||(37303981-37304021)
chr5 (17-89)||(39405311-39405383)
[»] chr4 (45 HSPs)
chr4 (9-89)||(38690665-38690745)
chr4 (19-88)||(34595928-34595996)
chr4 (8-79)||(45847941-45848012)
chr4 (8-89)||(29430496-29430577)
chr4 (1-41)||(52031254-52031294)
chr4 (7-41)||(38433358-38433392)
chr4 (8-89)||(16556450-16556531)
chr4 (8-89)||(43362183-43362264)
chr4 (8-89)||(46283121-46283202)
chr4 (10-83)||(55308053-55308125)
chr4 (1-41)||(8690261-8690301)
chr4 (1-41)||(15640451-15640491)
chr4 (10-89)||(35909045-35909125)
chr4 (1-36)||(4045076-4045111)
chr4 (1-36)||(7768796-7768831)
chr4 (1-36)||(9693014-9693049)
chr4 (1-36)||(14149845-14149880)
chr4 (1-36)||(28520739-28520774)
chr4 (33-88)||(32006501-32006555)
chr4 (1-36)||(36257746-36257781)
chr4 (1-36)||(37997854-37997889)
chr4 (1-36)||(48968218-48968253)
chr4 (13-88)||(53758975-53759049)
chr4 (1-36)||(56546457-56546492)
chr4 (7-41)||(12856231-12856265)
chr4 (8-74)||(24570224-24570290)
chr4 (7-41)||(45350323-45350357)
chr4 (7-41)||(45359802-45359836)
chr4 (51-89)||(52366206-52366244)
chr4 (7-36)||(3442895-3442924)
chr4 (7-40)||(3465631-3465664)
chr4 (8-69)||(11491234-11491295)
chr4 (1-69)||(11872891-11872960)
chr4 (7-68)||(13264260-13264321)
chr4 (7-36)||(30295565-30295594)
chr4 (7-36)||(30324467-30324496)
chr4 (3-36)||(34773693-34773726)
chr4 (48-89)||(39254599-39254640)
chr4 (48-89)||(49635431-49635472)
chr4 (8-41)||(55485841-55485874)
chr4 (48-88)||(20096291-20096330)
chr4 (2-74)||(23448987-23449059)
chr4 (1-41)||(36954184-36954224)
chr4 (1-41)||(40150520-40150560)
chr4 (1-41)||(42411462-42411502)
[»] chr3 (46 HSPs)
chr3 (7-89)||(50676881-50676963)
chr3 (7-88)||(166788-166869)
chr3 (10-79)||(28054746-28054815)
chr3 (10-79)||(28065171-28065240)
chr3 (2-83)||(38869200-38869281)
chr3 (8-89)||(50381713-50381794)
chr3 (1-68)||(24559408-24559476)
chr3 (26-86)||(42831929-42831988)
chr3 (13-91)||(10828470-10828548)
chr3 (7-89)||(43897601-43897683)
chr3 (7-89)||(45431626-45431708)
chr3 (13-62)||(20407304-20407353)
chr3 (8-89)||(39739273-39739354)
chr3 (7-79)||(1102710-1102782)
chr3 (30-90)||(11661201-11661261)
chr3 (8-40)||(23820677-23820709)
chr3 (13-53)||(32429785-32429825)
chr3 (1-41)||(36331734-36331774)
chr3 (1-36)||(3955360-3955395)
chr3 (1-36)||(9625035-9625070)
chr3 (1-36)||(10959185-10959220)
chr3 (1-32)||(23025953-23025984)
chr3 (1-88)||(25363577-25363662)
chr3 (1-36)||(27183689-27183724)
chr3 (1-88)||(31419583-31419670)
chr3 (1-40)||(36476407-36476446)
chr3 (3-38)||(46710886-46710921)
chr3 (8-79)||(47864645-47864716)
chr3 (7-53)||(335044-335090)
chr3 (3-41)||(362990-363028)
chr3 (7-41)||(16006520-16006554)
chr3 (8-89)||(25165439-25165521)
chr3 (7-41)||(43774232-43774266)
chr3 (3-41)||(49146131-49146169)
chr3 (7-88)||(12977257-12977338)
chr3 (13-62)||(23090282-23090331)
chr3 (7-88)||(23651084-23651165)
chr3 (1-34)||(24136760-24136793)
chr3 (2-79)||(31202916-31202993)
chr3 (8-73)||(32421363-32421428)
chr3 (8-89)||(33528220-33528301)
chr3 (3-36)||(35280713-35280746)
chr3 (19-88)||(46226070-46226137)
chr3 (7-39)||(14417917-14417949)
chr3 (8-36)||(34407105-34407133)
chr3 (48-88)||(35126290-35126329)
[»] chr7 (38 HSPs)
chr7 (8-89)||(25770057-25770138)
chr7 (7-88)||(46243291-46243372)
chr7 (8-89)||(24029984-24030065)
chr7 (8-89)||(25775628-25775709)
chr7 (8-89)||(33248817-33248898)
chr7 (8-89)||(36528234-36528315)
chr7 (1-41)||(41417283-41417323)
chr7 (1-79)||(28914885-28914964)
chr7 (7-90)||(48525575-48525658)
chr7 (1-87)||(3961416-3961502)
chr7 (8-74)||(43440703-43440769)
chr7 (7-88)||(23602274-23602355)
chr7 (8-89)||(31793467-31793548)
chr7 (19-68)||(34809365-34809414)
chr7 (8-89)||(40273820-40273901)
chr7 (16-88)||(9992610-9992682)
chr7 (13-88)||(18223709-18223783)
chr7 (1-36)||(19126789-19126824)
chr7 (1-36)||(31475848-31475883)
chr7 (8-74)||(4956107-4956173)
chr7 (13-87)||(9497971-9498044)
chr7 (14-88)||(29132036-29132110)
chr7 (13-66)||(3392492-3392545)
chr7 (48-89)||(8249704-8249745)
chr7 (4-41)||(16814744-16814781)
chr7 (7-36)||(22965972-22966001)
chr7 (7-36)||(23685568-23685597)
chr7 (7-36)||(30644221-30644250)
chr7 (13-62)||(41090290-41090339)
chr7 (8-89)||(48433725-48433806)
chr7 (8-36)||(12166134-12166162)
chr7 (1-41)||(14818373-14818413)
chr7 (1-41)||(15265371-15265411)
chr7 (1-41)||(24396992-24397032)
chr7 (7-35)||(24579300-24579328)
chr7 (19-83)||(27263347-27263410)
chr7 (1-29)||(36343388-36343416)
chr7 (8-36)||(42841796-42841824)
[»] chr1 (47 HSPs)
chr1 (8-85)||(2465948-2466025)
chr1 (8-89)||(14262736-14262817)
chr1 (7-79)||(19424055-19424127)
chr1 (1-40)||(38021300-38021339)
chr1 (12-86)||(34940436-34940509)
chr1 (8-89)||(7438620-7438701)
chr1 (8-89)||(10123068-10123148)
chr1 (8-89)||(24134639-24134720)
chr1 (1-53)||(24168587-24168639)
chr1 (1-53)||(27984999-27985051)
chr1 (1-41)||(29491517-29491557)
chr1 (1-36)||(17350113-17350148)
chr1 (4-43)||(33844662-33844701)
chr1 (4-43)||(33949277-33949316)
chr1 (1-36)||(39238768-39238803)
chr1 (19-78)||(40209941-40210000)
chr1 (8-74)||(8893874-8893940)
chr1 (1-39)||(9931136-9931174)
chr1 (3-53)||(11213459-11213509)
chr1 (30-88)||(47719110-47719167)
chr1 (7-41)||(48260203-48260237)
chr1 (7-41)||(49251409-49251443)
chr1 (13-87)||(50118977-50119050)
chr1 (48-89)||(4126898-4126939)
chr1 (19-88)||(9639809-9639877)
chr1 (8-41)||(12148588-12148621)
chr1 (48-89)||(12973333-12973374)
chr1 (7-36)||(21884627-21884656)
chr1 (7-36)||(30649145-30649174)
chr1 (7-36)||(32711158-32711187)
chr1 (8-89)||(34702328-34702409)
chr1 (7-40)||(38028585-38028618)
chr1 (8-89)||(48497228-48497309)
chr1 (8-89)||(49619971-49620052)
chr1 (10-83)||(52164388-52164461)
chr1 (8-69)||(52720703-52720764)
chr1 (19-62)||(1813337-1813381)
chr1 (1-41)||(2643823-2643863)
chr1 (7-83)||(4865808-4865883)
chr1 (4-36)||(12553246-12553278)
chr1 (13-57)||(14320924-14320968)
chr1 (48-88)||(19396212-19396251)
chr1 (48-88)||(24631840-24631879)
chr1 (8-72)||(25800348-25800412)
chr1 (48-88)||(27160495-27160535)
chr1 (30-86)||(32874392-32874447)
chr1 (20-88)||(38491045-38491113)
[»] scaffold0072 (1 HSPs)
scaffold0072 (8-64)||(17748-17804)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-36)||(17939-17974)
[»] scaffold0119 (1 HSPs)
scaffold0119 (7-36)||(1091-1120)
[»] scaffold0001 (1 HSPs)
scaffold0001 (8-89)||(419711-419792)


Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7927078 - 7927317
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcatatagacttgtg 100  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  7927078 tttaaagtgaataagtgggatgtc-ggggttcgaactctgatctttgcatatattatacattatcccttaccaagtgagttaagctcatgtagacttgtg 7927176  T
Q  101 ttgagtatgttgttttgtcttttttggatttgtacctttacttggtgactaagcttctcaatagtgagaacttaacttacttccattttttgatgctcaa 200  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  7927177 ttgagtttgttgttttgtattttttggatttgtacctttacttggtgactaagcttctcaatagtgagaacataacttacttccattttttgatgctaaa 7927276  T
Q  201 ttagatcttctattttacacttgagattgatttccttcatc 241  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7927277 ttagatcttctattttacacttgagattgatttccttcatc 7927317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 7929082 - 7929220
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcatatagacttgtg 100  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||| | ||||||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  7929082 tttaaagtgaataagtgggatgtatggggtttgaactccggtctctgcatatattatgtattatcccttatcaagtgagttaaactcatataaacttgtg 7929181  T
Q  101 ttgagtatgttgttttgtcttttttggatttgtaccttt 139  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  7929182 ttgagtttgttgttttgtcttttttggatttgtaccttt 7929220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 17217038 - 17216957
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| || ||||||||||||| |  |||| |||||||||||||||||||||||| |||| ||| |||||    
T  17217038 tgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatcccttaccaaatgagctaagctcat 17216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 5641704 - 5641779
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    |||||||||||||||||| || |||||||| ||| || |  |||| |||||||||||||| ||||||||||||||||    
T  5641704 gtgaataagtggggtgtccggagttcgaaccccggtcctg-cataaattatgcattatccattaccaagtgagttaa 5641779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29284205 - 29284153
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    |||||||||||||||||||||||| ||||||||||| ||||||  ||||||||    
T  29284205 tttaaagtgaataagtggggtgtccggggttcgaaccccgatccctacatata 29284153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 1128434 - 1128509
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||||| ||||||||||||||||||||| || | |  | || |||||||||||||||||||| ||| ||||||||    
T  1128434 tgaataaatggggtgtctggggttcgaaccccaacccctgcacatattatgcattatcccttatcaaatgagttaa 1128509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 9455920 - 9455854
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    ||||||||||||||||| ||||||||||||||||| |  |||||| |  |||||||||||||||||||    
T  9455920 gtgaataagtggggtgtttggggttcgaactccgacccctacataca-aatgcattatcccttaccaa 9455854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 6228275 - 6228356
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  6228275 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 6228356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 19748185 - 19748108
Alignment:
Q  2 ttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||| ||||||||||||||||| | ||||||||| || |||  | || ||||| |||||||||||||||||| ||||    
T  19748185 ttaaaatgaataagtggggtgtccgtggttcgaaccccaatccctgcacatattgtgcattatcccttaccaaatgag 19748108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20600627 - 20600567
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcatt 62  Q
    ||||| |||||||||||||||||| ||| ||||||| | ||||| |||||||||||||||||    
T  20600627 tttaaggtgaataagtggggtgtcaggg-ttcgaaccctgatctctacatatattatgcatt 20600567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 6218031 - 6217960
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    |||||||| ||||| || ||||||| ||||||||| | |||||||||| ||| ||||||| ||||||||||||    
T  6218031 gtgaataaatggggagtttggggtttgaactccgaccattacatatat-atgtattatcctttaccaagtgag 6217960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6144051 - 6144016
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  6144051 tttaaagtgaataagtggggtgtccggggttcgaac 6144016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 9064953 - 9064918
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||| |||||||||||||||||||||||||||    
T  9064953 tttaaagtaaataagtggggtgtctggggttcgaac 9064918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 19642560 - 19642595
Alignment:
Q  6 agtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19642560 agtgaataagtggggtgtctggggttcgaaccccga 19642595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 30938470 - 30938392
Alignment:
Q  9 gaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||| ||||||||||||||||||| ||| ||  | ||||||||||||| | |||| |||||| |||||||| ||||    
T  30938470 gaataagtagggtgtctggggttcgaaccccggtccctgcatatattatgcaatgtccc-taccaactgagttaagctca 30938392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 33628949 - 33628984
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  33628949 tttaaagtgaataagtggggtgtccggggttcgaac 33628984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 6283995 - 6283962
Alignment:
Q  29 gttcgaactccgatctttacatatattatgcatt 62  Q
    ||||||||||||| ||||||||||||||||||||    
T  6283995 gttcgaactccgagctttacatatattatgcatt 6283962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 8330505 - 8330586
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||| |||| | || ||||||||||| ||  |||||||| |||| ||||||| ||| |||| ||||||| ||||    
T  8330505 gtgaataagtggagtgttttggcttcgaactccggtccctacatataatatgtattatcctttatcaagagagttaagctca 8330586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 12089178 - 12089145
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||| |||||||||||||||    
T  12089178 gtgaataagtggggtgtccggggttcgaactccg 12089145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 26669673 - 26669702
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  26669673 gtgaataagtggggtgtctggggttcgaac 26669702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 7273091 - 7273051
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||| |||||||||||||||| |||||||| ||||    
T  7273091 catatattattcattatcccttaccaactgagttaagctca 7273051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 17751348 - 17751380
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||| |||||||||||    
T  17751348 aaagtgaataagtggggtgtccggggttcgaac 17751380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32540959 - 32540999
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||| ||||||||||||||| ||||| |||||||||||||    
T  32540959 tttaaggtgaataagtggggtatctggagttcgaactccga 32540999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 42678339 - 42678420
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||||||||||  |||  ||||| |||||||||||||||||||| ||||||||||||    
T  42678339 tgaataagtggggtgtccggggttcgaactccgatccctacgcatattgtgcattatcccttaccaagtaagttaaactcat 42678420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 3330216 - 3330291
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||||||||||||||| |||||||||||||||| || | || ||||| ||||||||||||||| || ||||||||    
T  3330216 tgaataagtggggtgtccggggttcgaactccgacctctgcacatattgtgcattatcccttactaaatgagttaa 3330291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 31594380 - 31594457
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaa 84  Q
    |||||||| |||||||| |||| |||||||| ||| |  ||||||||||||||||||| ||||||||| |||||||||    
T  31594380 gtgaataaatggggtgtttgggattcgaacttcgacccctacatatattatgcattattccttaccaaatgagttaaa 31594457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 33613619 - 33613682
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatccctta 70  Q
    |||||||||||||||||| |||||||||||||||| | |  |||||| ||||||||||||||||    
T  33613619 gtgaataagtggggtgtccggggttcgaactccgaccctcgcatataatatgcattatccctta 33613682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44187791 - 44187751
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  44187791 tttaaagtgaataagtggggtgtctggggttcgaaccccga 44187751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 44422192 - 44422152
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaactccgatc 43  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  44422192 taaagtgaataagtggggtgtccggggttcgaactccgatc 44422152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 1962906 - 1962831
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||||||||||||||| || ||||||||  ||| |  | |||| | |||||||||||| ||||||||||||||||    
T  1962906 tgaataagtggggtgtccggagttcgaacctcgacccctgcatacaatatgcattatcctttaccaagtgagttaa 1962831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 29035063 - 29035028
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  29035063 tttaaagtgaataagtggggtgtccggggttcgaac 29035028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32527085 - 32527120
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32527085 tttaaagtgaataagtgggttgtctggggttcgaac 32527120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34034437 - 34034402
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  34034437 tttaaagtgaataagtggggtgtccggggttcgaac 34034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 10262820 - 10262786
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||| ||||    
T  10262820 gtgaataagtggggtgtctggggttcgaaccccga 10262786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 11727414 - 11727368
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    ||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  11727414 gtgaataagtggggtgtttggggttcgaactccggtccctacatata 11727368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 17115554 - 17115604
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    |||||||||||| |||| |||| |||||||||||||||| |||| ||||||    
T  17115554 taaagtgaataaatgggatgtccggggttcgaactccgacctttgcatata 17115604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 17543105 - 17543171
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    ||||||||||||||||| || ||||||||||||  |  | || ||||| ||||||||||||||||||    
T  17543105 tgaataagtggggtgtccggcgttcgaactccggcccctgcacatattgtgcattatcccttaccaa 17543171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20451864 - 20451902
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactcc 39  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  20451864 tttaaagtgaataagtggagtgtttggggttcgaactcc 20451902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 24202224 - 24202150
Alignment:
Q  14 agtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||| ||||||||||| |||  |  | |||| || |||||||||||||||||||||||| ||| ||||    
T  24202224 agtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttaccaagtgagctaagctca 24202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 36755692 - 36755622
Alignment:
Q  18 gggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||| ||||||| ||| |||| |  || |||||| || ||||||||||||||||||||||||| ||||    
T  36755692 gggtgtccggggttcaaaccccgacccctatatatataatccattatcccttaccaagtgagttaagctca 36755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 6866586 - 6866513
Alignment:
Q  10 aataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    |||||||| |||||| ||| ||||||||||| |   | || ||||| |||||||||||||||||| ||||||||    
T  6866586 aataagtgaggtgtccgggattcgaactccggttcctgcacatattgtgcattatcccttaccaaatgagttaa 6866513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 30474209 - 30474238
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  30474209 gtgaataagtggggtgtctggggttcgaac 30474238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 36190138 - 36190089
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    ||||||||||||||||||||||| |||||||||  ||| | |||||||||    
T  36190138 aaagtgaataagtggggtgtctgaggttcgaacctcgacccttacatata 36190089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 36845180 - 36845120
Alignment:
Q  27 gggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||| |||||||||| || | ||||||||||||||| |||| |||||||||||||| |||||    
T  36845180 gggtccgaactccgacctctgcatatattatgcattgtccc-taccaagtgagttatactca 36845120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 40203294 - 40203375
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||| |||||||||| ||| | || | ||||| ||||| | |||||||||||||| | |||| ||| |||||    
T  40203294 tgaataagtggggtatctggggttcaaaccctgacccttacacatattgtacattatcccttaccgaatgagctaagctcat 40203375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2304377 - 2304337
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||| ||||||||||||||| ||||||||||| ||||    
T  2304377 tttaaagtaaataagtggggtgtccggggttcgaaccccga 2304337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 4157663 - 4157695
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactcc 39  Q
    |||||||||||||||||| ||||||||||||||    
T  4157663 gtgaataagtggggtgtccggggttcgaactcc 4157695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 5207173 - 5207145
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaa 35  Q
    |||||||||||||||||||||||||||||    
T  5207173 gtgaataagtggggtgtctggggttcgaa 5207145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 14944205 - 14944154
Alignment:
Q  45 ttacatatattatgcattatcccttaccaagtgagttaaactcatatagactt 97  Q
    |||||||||||||||||| ||| |||| ||||||||||| |||| ||||||||    
T  14944205 ttacatatattatgcattgtcc-ttactaagtgagttaagctcacatagactt 14944154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 20435861 - 20435781
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||| |||| | ||||||||| |||  | || |||| | |||||| |||||||||||||||||| ||| ||||    
T  20435861 tgaataagtgggatgtccgaggttcgaaccccgggccttgcataaaatatgcaatatcccttaccaagtgagctaagctca 20435781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 20942123 - 20942155
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactcc 39  Q
    ||||||||||| |||||||||||||||||||||    
T  20942123 gtgaataagtgaggtgtctggggttcgaactcc 20942155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 30856574 - 30856614
Alignment:
Q  50 tatattatgcattatcccttaccaagtgagttaaactcata 90  Q
    ||||||||||||||||||||| ||| |||||||| ||||||    
T  30856574 tatattatgcattatcccttatcaattgagttaatctcata 30856614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 31605566 - 31605499
Alignment:
Q  20 gtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||| ||||||||| ||| ||  | ||||||| |||||||||||||||| ||||||||||| ||||    
T  31605566 gtgtctgaggttcgaaccccgttccctgcatatat-atgcattatcccttactaagtgagttaagctca 31605499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 36413844 - 36413808
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||||||  ||||||||||||||    
T  36413844 aaagtgaataagtggggtgtccagggttcgaactccg 36413808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 40133563 - 40133531
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||||||| ||||    
T  40133563 aaagtgaataagtggggtgtctggggtttgaac 40133531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 43456661 - 43456738
Alignment:
Q  2 ttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||||| |||||||||||||||||| ||||    
T  43456661 ttaaaatgaataagtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatcccttaccaaatgag 43456738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 10201343 - 10201276
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    |||||||| || |||||| ||||||||||| |||| |  |||||||||||||||||||| ||||||||    
T  10201343 gtgaataaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatctcttaccaa 10201276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 38790580 - 38790615
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  38790580 tttaaagtgaataagtggggtgtctggggttcgaac 38790615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43508456 - 43508534
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||| |||||||||||||||||| ||||||| ||| |||  |  ||||||||||||||||| ||||||| ||| ||||    
T  43508456 tttaaggtgaataagtggggtgtccggggttcaaaccccggcccctacatatattatgcattgtcccttatcaactgag 43508534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 1032650 - 1032569
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||||||||||||||| ||   |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  1032650 tgaataagtggggtgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 1032569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 3311520 - 3311439
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| | ||||  | |||| ||| | ||||||||||| |||| |||||||| |||||    
T  3311520 tgaataagtggggtgtccggggttcgaaccctgatccctgcataaattgtacattatcccttgccaaatgagttaagctcat 3311439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 36103937 - 36104018
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||| |||||||||||| |||  |  | || ||||| |||||||||| ||||||| |||||||| |||||    
T  36103937 tgaataagtggggtgtttggggttcgaaccccggcccctgcacatattgtgcattatcctttaccaaatgagttaagctcat 36104018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 41454842 - 41454923
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  41454842 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 41454923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31129389 - 31129349
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  31129389 tttaaagtgaataagtggggtgtccggggttcgaaccccga 31129349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 40444745 - 40444705
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  40444745 catatattatgcattatcccttaccaagtgagctaagctca 40444705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2696620 - 2696585
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  2696620 tttaaagtgaataagtggggtgtccggggttcgaac 2696585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2800106 - 2800071
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  2800106 tttaaagtgaataagtggggtgtccggggttcgaac 2800071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 7314820 - 7314785
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  7314820 tttaaagtgaataagtggggtgtccggggttcgaac 7314785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 8350516 - 8350441
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||||||||||||||| | |||||||||||||  |  | |||||||| || |||||| |||||||| ||||||||    
T  8350516 tgaataagtggggtgtccgaggttcgaactccggcccctgcatatattgtgtattatcacttaccaaatgagttaa 8350441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 13105169 - 13105095
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||| ||||||||| |||  | || ||||||||||||||| |||| |||||| |||||||| ||||    
T  13105169 aagtggggtgtctgaggttcgaaccccggcccttgcatatattatgcattgtccc-taccaactgagttaatctca 13105095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 18080979 - 18080944
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaa 83  Q
    |||||| |||||||||||||||||||||||||||||    
T  18080979 catataatatgcattatcccttaccaagtgagttaa 18080944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 38289250 - 38289321
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    |||||||||||||||| || ||||||||| |||| |  | || ||||| |||||||||||||||||| ||||    
T  38289250 tgaataagtggggtgtttgaggttcgaaccccgacccctgcacatattgtgcattatcccttaccaaatgag 38289321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 39362343 - 39362288
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatccct 68  Q
    ||||||||||||||||||||||||||| | || | |||||| |||||| |||||||    
T  39362343 aagtggggtgtctggggttcgaactccaacctctgcatataatatgcaatatccct 39362288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 11810648 - 11810570
Alignment:
Q  10 aataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||| |||||| | || |||| |||| |  || |||||||||||||||||| |||||||||||| ||| ||||    
T  11810648 aataagtgggatgtctgagttttgaaccccgaccgctatatatattatgcattatccattaccaagtgagctaagctca 11810570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 33982275 - 33982237
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  33982275 taaagtgaataagtgcggtgtctggggttcgaaccccga 33982237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 4259939 - 4259858
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||| ||| |||||| |||| |||  |  | || ||||| |||||||||||||||||| |||||||| |||||    
T  4259939 tgaataagtggggagtccggggttggaaccccggcccctgcacatattgtgcattatcccttaccaaatgagttaagctcat 4259858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 13537326 - 13537359
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||||||||||||| ||||    
T  13537326 tgaataagtggggtgtctggggttcgaaccccga 13537359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 13626874 - 13626907
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||||||||||||| ||||    
T  13626874 tgaataagtggggtgtctggggttcgaaccccga 13626907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 41845444 - 41845525
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||| | ||||||  ||||||||||| ||||||  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  41845444 tgaataaatagggtgttcggggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 41845525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1360142 - 1360230
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||| ||||||||||||||||| ||||||||||| ||   |  |||| ||||| |||||||||| || |||| |||| ||| |||||    
T  1360142 tttaaaatgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtgcattatcctttgccaaatgagctaagctcat 1360230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10310369 - 10310329
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| ||| ||| ||||||||    
T  10310369 tttaaagtgaataagtggggtgtccgggattcaaactccga 10310329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 16935667 - 16935639
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||||||||    
T  16935667 tgaataagtggggtgtctggggttcgaac 16935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 31220384 - 31220344
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||| |||||||||||||||||||||||| ||| ||||    
T  31220384 catatataatgcattatcccttaccaagtgagctaagctca 31220344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 39104686 - 39104607
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||| |||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||||||||    
T  39104686 tgaataagtggg-tgtccggggttcgaaccccggccgctgcacatattgtgcattatcccttaccaaatgagctaaactca 39104607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 39432339 - 39432371
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||| |||||||||    
T  39432339 aaagtgaataagtggggtgtctgaggttcgaac 39432371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 45536798 - 45536766
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccg 40  Q
    ||||||||||||||||| |||||||||||||||    
T  45536798 tgaataagtggggtgtccggggttcgaactccg 45536766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 7608080 - 7608153
Alignment:
Q  10 aataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| ||||||||    
T  7608080 aataagtgaggtgtctggggttcgaactccgatctttacataaattgtgcattatcctttatcaaatgagttaa 7608153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 87863 - 87798
Alignment:
Q  16 tggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagtt 81  Q
    |||||||||||| ||||||||||||| | || |||||||| |||||||||||||||||| ||||||    
T  87863 tggggtgtctggagttcgaactccgacccttgcatatattgtgcattatcccttaccaaatgagtt 87798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 20191522 - 20191442
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||| ||||| ||||||||||| |||| |  | ||||||  |||||||||||||||||||||||||||| ||||    
T  20191522 gtgaataagtggagtgtccggggttcgaaccccgacccctgcatataa-atgcattatcccttaccaagtgagttaagctca 20191442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 34729552 - 34729481
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    |||||||||||||||||| ||| ||||||| |||| |  | |||||| |||||||||||||||||||||||||    
T  34729552 gtgaataagtggggtgtccggg-ttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgag 34729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 15106902 - 15106977
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||||||||||||||| ||||||||||| |||| || | || | ||| |||||||||||||||||| | ||||||    
T  15106902 tgaataagtggggtgtccggggttcgaaccccgacctctgcacaaattgtgcattatcccttaccaaataagttaa 15106977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18101957 - 18101996
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccg 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  18101957 tttaaggtgaataagtggggtgtctggggttcgaactccg 18101996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 43227946 - 43227864
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcata 90  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| ||||||    
T  43227946 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcata 43227864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 9628198 - 9628117
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||| | ||||||||| ||||||||| ||||    | |||||||||||||||||| |||||||| |||||||| ||||    
T  9628198 gtgaataaatagggtgtctgaggttcgaaccccgaatcctgcatatattatgcattatctcttaccaaatgagttaagctca 9628117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 16745159 - 16745102
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatccctta 70  Q
    ||||||||||||||| ||||||||||||| |  |||||||| |||||| |||||||||    
T  16745159 aagtggggtgtctggagttcgaactccgacccctacatataatatgcaatatccctta 16745102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 31250227 - 31250146
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  31250227 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 31250146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 38503272 - 38503353
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  38503272 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 38503353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 2411309 - 2411341
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||||||||||||||||||    
T  2411309 tgaataagtggggtgtctggggttcgaactccg 2411341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4674823 - 4674863
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  4674823 tttaaagtgaataagtggggtgtccggggttcgaaccccga 4674863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36045142 - 36045182
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  36045142 tttaaagtgaataagtggggtgtccggggttcgaaccccga 36045182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1463958 - 1463923
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  1463958 tttaaagtgaataagtggggtgtccggggttcgaac 1463923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 10943803 - 10943768
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  10943803 tttaaagtgaataagtggggtgtccggggttcgaac 10943768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 31556899 - 31556865
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||| ||||||||||||||||    
T  31556899 gtgaataagtggggtgtccggggttcgaactccga 31556865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 1244741 - 1244770
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  1244741 gtgaataagtggggtgtctggggttcgaac 1244770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 17077441 - 17077360
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||  |||| |  | || | ||| |||||||||||||||||| |||| ||| |||||    
T  17077441 tgaataagtggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatcccttaccaaatgagctaagctcat 17077360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 27025443 - 27025472
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  27025443 gtgaataagtggggtgtctggggttcgaac 27025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 29096322 - 29096355
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||| |||||||||||||||    
T  29096322 gtgaataagtggggtgtccggggttcgaactccg 29096355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 33800974 - 33800945
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  33800974 gtgaataagtggggtgtctggggttcgaac 33800945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 8241128 - 8241053
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||| ||||||||||| |||| | || |||||| |||||| |||||| |||||| |||| ||| |||||    
T  8241128 aagtggggtgtccggggttcgaaccccgacccttgcatataatatgcaatatccc-taccaactgagctaagctcat 8241053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 18175287 - 18175235
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgca 60  Q
    |||||||||||| |||||||||||||||| |||| |  |||||||| ||||||    
T  18175287 tgaataagtgggatgtctggggttcgaaccccgacccctacatataatatgca 18175235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 28537219 - 28537187
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||| |||||||||||    
T  28537219 aaagtgaataagtggggtgtccggggttcgaac 28537187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 31991816 - 31991856
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||| |||||||||||||||||||||||| ||| ||||    
T  31991816 catatataatgcattatcccttaccaagtgagctaagctca 31991856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37304021 - 37303981
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||||||||  |||||||||| ||||    
T  37304021 tttaaagtgaataagtggggtgtccagggttcgaaccccga 37303981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 39405383 - 39405311
Alignment:
Q  17 ggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||| ||| ||| |||| |  |||| || ||||||||||||||||||||| |||| ||| |||||    
T  39405383 ggggtgtctgggattcaaaccccgacccctacacatgttatgcattatcccttaccaaatgaggtaacctcat 39405311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 38690745 - 38690665
Alignment:
Q  9 gaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||| ||||||||||| |||| |  | |||||| ||||||||||||||||||||||||| ||| |||||    
T  38690745 gaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgagctaagctcat 38690665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 34595928 - 34595996
Alignment:
Q  19 ggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||| ||| |||| |||||||||||||||||||| | ||||||||| |||||||||||||    
T  34595928 ggtgtctggggttcaaaccccgaactttacatatattatgcattgt-ccttaccaactgagttaaactca 34595996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 45847941 - 45848012
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||||||||||||||| ||||||||||| ||||||  | || |||||||||||||||||||| ||| ||||    
T  45847941 tgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatcccttatcaaatgag 45848012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 29430577 - 29430496
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||| ||||||| ||||||||||| ||||||  | |||||| |||||||| ||||||||||||| || ||| |||||    
T  29430577 tgaataagtagggtgtccggggttcgaaccccgatcactgcatataatatgcattgtcccttaccaagtaagctaagctcat 29430496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52031294 - 52031254
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  52031294 tttaaagtgaataagtggggtgtctggggttcgaaccccga 52031254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 38433392 - 38433358
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||||||||    
T  38433392 gtgaataagtggggtgtctggggttcgaactccga 38433358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 16556531 - 16556450
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||  ||||||||||| |||| |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  16556531 tgaataagtggggtgttcggggttcgaaccccgacccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 16556450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 43362183 - 43362264
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||| |  |  ||||||| |||||||||||||| ||| |||| ||| |||||    
T  43362183 tgaataagtggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaatgagctaagctcat 43362264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 46283202 - 46283121
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  46283202 tgaataagtggggtgtccggggttcgaaccccggccgctgcacatattgtgcattatcccttaccaaatgaggtaagctcat 46283121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 55308053 - 55308125
Alignment:
Q  10 aataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||||||||||||||||||||||||  | ||||  | |||| |||||||||||||| ||||||| ||||||||    
T  55308053 aataagtggggtgtctggggttcgaatcctgatccctgcataaattatgcattatcctttaccaa-tgagttaa 55308125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8690301 - 8690261
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  8690301 tttaaagtgaataagtggggtgtccggggttcgaaccccga 8690261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15640451 - 15640491
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  15640451 tttaaagtgaataagtggggtgtctgaggttcgaaccccga 15640491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 35909045 - 35909125
Alignment:
Q  10 aataagtggggtgtctggggttcgaa-ctccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||||| |||||| |||||| |  | |||||||| ||||||||||||||| || |||| ||| |||||    
T  35909045 aataagtggggtgtctgggattcgaacctccgacccctgcatatattgtgcattatcccttacaaaatgagctaagctcat 35909125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 4045076 - 4045111
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4045076 tttaaagtgaataagtggggtgtttggggttcgaac 4045111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7768796 - 7768831
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  7768796 tttaaagtgaataagtggggtgtccggggttcgaac 7768831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 9693049 - 9693014
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  9693049 tttaaagtgaataagtggggtgtccggggttcgaac 9693014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 14149880 - 14149845
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  14149880 tttaaagtgaataagtggggtgtccggggttcgaac 14149845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 28520739 - 28520774
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  28520739 tttaaagtgaataagtggggtgtccggggttcgaac 28520774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 32006555 - 32006501
Alignment:
Q  33 gaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||| |||| ||||||||||||||||||||||||| |||||| |||| ||||||||    
T  32006555 gaaccccgaactttacatatattatgcattatccc-taccaactgagctaaactca 32006501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 36257781 - 36257746
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  36257781 tttaaagtgaataagtggggtgtccggggttcgaac 36257746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 37997854 - 37997889
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37997854 tttaaggtgaataagtggggtgtctggggttcgaac 37997889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 48968218 - 48968253
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  48968218 tttaaagtgaataagtggggtgtccggggttcgaac 48968253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 53759049 - 53758975
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||| ||||| ||| |||||||||||| |  | ||||||| ||||||||||||||||||| |||| ||||||||    
T  53759049 aagtggagtgtccgggattcgaactccgacccctgcatatat-atgcattatcccttaccaattgagctaaactca 53758975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 56546457 - 56546492
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  56546457 tttaaagtgaataagtggggtgtctgtggttcgaac 56546492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 12856265 - 12856231
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||| ||||||||||||||||    
T  12856265 gtgaataagtggggtgtccggggttcgaactccga 12856231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 24570290 - 24570224
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    ||||||||| ||||||  ||||||||||| || | |  |||||||||| ||||||||||||||||||    
T  24570290 tgaataagtagggtgttcggggttcgaaccccaacccctacatatattgtgcattatcccttaccaa 24570224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 45350357 - 45350323
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||| ||||||||||||||||    
T  45350357 gtgaataagtggggtgtccggggttcgaactccga 45350323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 45359836 - 45359802
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||| ||||||||||||||||    
T  45359836 gtgaataagtggggtgtccggggttcgaactccga 45359802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 52366244 - 52366206
Alignment:
Q  51 atattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  52366244 atattgtgcattatcccttaccaaatgagttaaactcat 52366206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 3442924 - 3442895
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  3442924 gtgaataagtggggtgtctggggttcgaac 3442895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 3465664 - 3465631
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||| |||||||||||||||    
T  3465664 gtgaataagtggggtgtccggggttcgaactccg 3465631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 11491234 - 11491295
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatccctt 69  Q
    ||||||||||||||||| |||||||||||||||  |  | || | |||||||||||||||||    
T  11491234 tgaataagtggggtgtccggggttcgaactccggcccctgcacaaattatgcattatccctt 11491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11872960 - 11872891
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatat-attatgcattatccctt 69  Q
    |||||||||||||||| || |||| |||||||||||||||| |  ||||||| || ||||||| ||||||    
T  11872960 tttaaagtgaataagtaggatgtccggggttcgaactccgacccctacatataataatgcattgtccctt 11872891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 13264260 - 13264321
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatccct 68  Q
    ||||| |||||||||||| ||||||||||| ||| || || |||||| |||||| |||||||    
T  13264260 gtgaagaagtggggtgtccggggttcgaaccccggtccttgcatataatatgcaatatccct 13264321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 30295594 - 30295565
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  30295594 gtgaataagtggggtgtctggggttcgaac 30295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 30324496 - 30324467
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  30324496 gtgaataagtggggtgtctggggttcgaac 30324467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 34773693 - 34773726
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||| |||||||||||    
T  34773693 taaagtgaataagtggggtgtccggggttcgaac 34773726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 39254599 - 39254640
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||| ||||| |||||| |||||||||||||||||    
T  39254599 catatattatgtattattccttactaagtgagttaaactcat 39254640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 49635472 - 49635431
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||| |||||||||||||||||| |||| |||||||||    
T  49635472 catatattgtgcattatcccttaccaaatgagctaaactcat 49635431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 55485841 - 55485874
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||||||||||||| ||||    
T  55485841 tgaataagtggggtgtctggggttcgaaccccga 55485874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 20096291 - 20096330
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  20096291 catatattatgcattatccc-taccaactgagttaaactca 20096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 23449059 - 23448987
Alignment:
Q  2 ttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    ||||| ||||||||||||||||  ||||||||||| || | |  | || ||||| ||||||||||||||||||    
T  23449059 ttaaaatgaataagtggggtgttcggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaa 23448987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36954224 - 36954184
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||| ||||||||| ||||||||||| ||||    
T  36954224 tttaaagtgaataaatggggtgtccggggttcgaaccccga 36954184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40150560 - 40150520
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||| |||||| ||||||||||| ||||    
T  40150560 tttaaagtgaataagtgaggtgtccggggttcgaaccccga 40150520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42411462 - 42411502
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||| ||||||||||||||| ||||||||||| ||||    
T  42411462 tttaaagtaaataagtggggtgtccggggttcgaaccccga 42411502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 50676881 - 50676963
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||||  ||||||||||| || | |  |||||||| |||| ||| ||||||||||||||||||||||||||    
T  50676881 gtgaataagtggggtgttcggggttcgaaccccaacccctacatataatatgtattgtcccttaccaagtgagttaaactcat 50676963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 166869 - 166788
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||| |||||||||||||||||| |||  |  | |||| ||||||||||||||||||||||||||| ||| ||||    
T  166869 gtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatcccttaccaagtgagctaagctca 166788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 28054746 - 28054815
Alignment:
Q  10 aataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||||||||||||||||||||||||||| || |  | |||| |||||||| ||||||||||||||||||    
T  28054746 aataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaagtgag 28054815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 28065171 - 28065240
Alignment:
Q  10 aataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||||||||||||||||||||||||||| || |  | |||| |||||||| ||||||||||||||||||    
T  28065171 aataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaagtgag 28065240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 38869200 - 38869281
Alignment:
Q  2 ttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    |||||||| |||||||| ||||  ||||||||||| |||| |  | ||| ||||||||||||||||||||||||||||||||    
T  38869200 ttaaagtggataagtggcgtgttcggggttcgaaccccgacccctgcatgtattatgcattatcccttaccaagtgagttaa 38869281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 50381794 - 50381713
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||| ||||||| |||| |  | |||||||| |||||||||||||||||| |||||||| |||||    
T  50381794 tgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatcccttaccaaatgagttaagctcat 50381713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24559476 - 24559408
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatat-attatgcattatccct 68  Q
    |||||||||||||||||||||||| ||||||||||| |||| |  | ||||| ||||||||||||||||    
T  24559476 tttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataattatgcattatccct 24559408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 42831929 - 42831988
Alignment:
Q  26 ggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaact 86  Q
    |||||||||||||||| || |||||||| ||||||||||||| ||||||||||| ||||||    
T  42831929 ggggttcgaactccgacctctacatataatatgcattatccc-taccaagtgagctaaact 42831988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 10828548 - 10828470
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcatat 91  Q
    |||||||||||||||||||||||||||| ||| | |||||| ||||||||   || |||||| |||| ||| |||||||    
T  10828548 aagtggggtgtctggggttcgaactccggtctctgcatataatatgcatttgtccctaccaactgagctaagctcatat 10828470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 43897683 - 43897601
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||||||| |||||||||  | |||  |||||||| ||| |||| | ||||||||||| || |||||||||    
T  43897683 gtgaataagtggggtgtctgaggttcgaacatcaatccctacatataatatacatttttccttaccaagtaagctaaactcat 43897601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 45431708 - 45431626
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||||| ||||||||||| | || |  | |||| | || |||||||||||||||||||||| ||| |||||    
T  45431708 gtgaataagtggggtgtccggggttcgaaccctgacccctgcataaaatacgcattatcccttaccaagtgagctaagctcat 45431626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 20407353 - 20407304
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcatt 62  Q
    |||||||||||||||||||||||| ||||||| | |||||| ||||||||    
T  20407353 aagtggggtgtctggggttcgaaccccgatctctgcatataatatgcatt 20407304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 39739354 - 39739273
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||| |||||| ||||||||||| || |||  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  39739354 tgaataagtgaggtgtccggggttcgaaccccaatccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 39739273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 1102710 - 1102782
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||||||||||||||||   |||||||||||||  |  | |||| ||||||||||||||||||||| |||||    
T  1102710 gtgaataagtggggtgtccatggttcgaactccgtcccctgcataaattatgcattatcccttaccaggtgag 1102782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 11661201 - 11661261
Alignment:
Q  30 ttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcata 90  Q
    |||||||||||| |  || ||| |||||||||||||||||| |||||||| ||||||||||    
T  11661201 ttcgaactccgacccctatataaattatgcattatcccttatcaagtgagctaaactcata 11661261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 23820709 - 23820677
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||||||||||||||||||    
T  23820709 tgaataagtggggtgtctggggttcgaactccg 23820677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 32429825 - 32429785
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  32429825 aagtggggtgtctggggttcgaactccgacctctacatata 32429785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36331734 - 36331774
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  36331734 tttaaagtgaataagtggggtgtccggggttcgaaccccga 36331774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 3955395 - 3955360
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  3955395 tttaaagtgaataagtggggtgtccggggttcgaac 3955360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 9625070 - 9625035
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  9625070 tttaaagtgaataagtggggtgtccggggttcgaac 9625035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 10959220 - 10959185
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  10959220 tttaaagtgaataagtggggtgtccggggttcgaac 10959185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23025984 - 23025953
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttc 32  Q
    ||||||||||||||||||||||||||||||||    
T  23025984 tttaaagtgaataagtggggtgtctggggttc 23025953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25363662 - 25363577
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||||||  ||||||| ||||||||||||||| | |  |||||||| |||||| ||| |||||| || |||||||||||||    
T  25363662 tttaaagtgaataaaaggggtgtgtggggttcgaactcc-aacactacatataatatgcaatat-ccttacaaactgagttaaactca 25363577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 27183689 - 27183724
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  27183689 tttaaagtgaataagtggggtgtccggggttcgaac 27183724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31419670 - 31419583
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||| ||||||||||||||||| |||||||||||| ||   |  |||| ||||| ||| || ||||||||||| |||||||| ||||    
T  31419670 tttaaggtgaataagtggggtgtttggggttcgaaccccagcccctacacatattgtgcgttgtcccttaccaaatgagttaagctca 31419583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36476446 - 36476407
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  36476446 tttaaagtgaataagtggggtgttcggggttcgaactccg 36476407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 46710886 - 46710921
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaactc 38  Q
    |||||||||||||||||||||||| |||||||||||    
T  46710886 taaagtgaataagtggggtgtctgaggttcgaactc 46710921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 47864716 - 47864645
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    ||||||||||||||||| ||||||||||| || | |  | || ||||| |||||||||||||||||| ||||    
T  47864716 tgaataagtggggtgtccggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaatgag 47864645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 335044 - 335090
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||    
T  335044 gtgaataagtggggtgtccagggttcgaactccggtccttacatata 335090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 363028 - 362990
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  363028 taaagtgaataagtggggtatccggggttcgaactccga 362990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 16006520 - 16006554
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||| ||||    
T  16006520 gtgaataagtggggtgtctggggttcgaaccccga 16006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 25165521 - 25165439
Alignment:
Q  8 tgaataagtgggg-tgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||| |||| ||||||||||| ||| ||  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  25165521 tgaataagtgggggtgtccggggttcgaaccccggtccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 25165439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 43774266 - 43774232
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||| ||||    
T  43774266 gtgaataagtggggtgtctggggttcgaaccccga 43774232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 49146169 - 49146131
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  49146169 taaagtgaataagtggggtgtccggggttcgaaccccga 49146131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 12977338 - 12977257
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||| ||| |||||||||||||||   | | || |||| ||||| ||||||||||| ||||||||| ||| ||||    
T  12977338 gtgaataagtgtggtatctggggttcgaactttaacccttgcataaattatacattatcccttgccaagtgagctaagctca 12977257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 23090331 - 23090282
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcatt 62  Q
    |||||||||||||||| ||||||| |||| | || |||||||||||||||    
T  23090331 aagtggggtgtctgggattcgaaccccgaccattgcatatattatgcatt 23090282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 23651084 - 23651165
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||||| |||| | |||||||||  |||  | || ||||||||||||||||| |||| ||| |||||||| ||||    
T  23651084 gtgaataagtgggatgtccgaggttcgaacctcgacttctatatatattatgcattatctcttatcaaatgagttaagctca 23651165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24136760 - 24136793
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcga 34  Q
    |||||||||||||||||||||||| |||||||||    
T  24136760 tttaaagtgaataagtggggtgtccggggttcga 24136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 31202993 - 31202916
Alignment:
Q  2 ttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    |||||||||||||||||| |||  | |||||||||  ||| |  ||||||||| ||| |||||||||| |||||||||    
T  31202993 ttaaagtgaataagtgggatgttcgtggttcgaacatcgaccactacatatataatgtattatcccttgccaagtgag 31202916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 32421428 - 32421363
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttacca 73  Q
    ||||||||||||| ||  | ||||||||| |||| |  | ||||||||||||||||||||||||||    
T  32421428 tgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatcccttacca 32421363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 33528220 - 33528301
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||||||||||||||| ||   |  | || | ||| |||||||||||||||||| |||| ||| |||||    
T  33528220 tgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatcccttaccaaatgagctaagctcat 33528301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 35280746 - 35280713
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||| ||||||||||    
T  35280746 taaagtgaataagtggggtgtctagggttcgaac 35280713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 46226070 - 46226137
Alignment:
Q  19 ggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||||||| |||  | || ||||||||||||||| |||| |||||| |||||||||||||    
T  46226070 ggtgtctggggttcgaac-ccggaccttgcatatattatgcattgtccc-taccaattgagttaaactca 46226137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 14417949 - 14417917
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactcc 39  Q
    |||||||||||||||||| ||||||||||||||    
T  14417949 gtgaataagtggggtgtccggggttcgaactcc 14417917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 34407105 - 34407133
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||||||||    
T  34407105 tgaataagtggggtgtctggggttcgaac 34407133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 35126290 - 35126329
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  35126290 catatattatgcattatccc-taccaactgagttaaactca 35126329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 25770057 - 25770138
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||| ||| ||||||||  || |  ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  25770057 tgaataagtggggtgtttggagttcgaacctcggttcttacatatattatacattatcctttaccaagtgagttaaattcat 25770138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 46243372 - 46243291
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||||||  || |||||||||||||||  || ||||| |||||||||||||||||||| |||| ||| ||||    
T  46243372 gtgaataagtggggtgttcggagttcgaactccgatccctatatataatatgcattatcccttaccaaatgagctaagctca 46243291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 24030065 - 24029984
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||| ||||||||||||||||||||| |||  |  |||| ||||| |||||||||||||| ||| |||| |||||||||    
T  24030065 tgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatcccttatcaaatgagctaaactcat 24029984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 25775628 - 25775709
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||| ||| ||||||||  || |  || |||||||||| |||||||| |||||||||||| |||||||||    
T  25775628 tgaataagtggggtgtttggagttcgaacctcggttcttgcatatattatacattatcctttaccaagtgagctaaactcat 25775709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 33248817 - 33248898
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||| ||||||| ||||||||||| |||| || | |||||||| ||||| |||||||||||| |||| ||| |||||    
T  33248817 tgaataagtagggtgtccggggttcgaaccccgacctctgcatatattgtgcatcatcccttaccaaatgagctaagctcat 33248898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 36528234 - 36528315
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||| ||||| |||| |||||||||||||||| |  || | ||||| |||||||||||||||||| |||||||| |||||    
T  36528234 tgaataggtgggatgtccggggttcgaactccgacccctatacatattgtgcattatcccttaccaaatgagttaagctcat 36528315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41417283 - 41417323
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  41417283 tttaaagtgaataagtggggtgtctggggttcgaaccccga 41417323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28914885 - 28914964
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactcc-gatctttacatatattatgcattatcccttaccaagtgag 79  Q
    |||||||||||||||||||||||| ||||||||||| || |  |  | |||||| ||||||||||||||||||| |||||    
T  28914885 tttaaagtgaataagtggggtgtccggggttcgaaccccggccccctgcatataatatgcattatcccttaccatgtgag 28914964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 48525658 - 48525575
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcata 90  Q
    ||||||||||| |||||| ||||||||||| || | |  | |||||| |||||||| ||||||||||||||||||  |||||||    
T  48525658 gtgaataagtgaggtgtccggggttcgaaccccaacccctgcatataatatgcattgtcccttaccaagtgagttggactcata 48525575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3961416 - 3961502
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactc 87  Q
    |||||| |||||||||||| |||| ||||||||||| |||  || | || | ||| |||||||||| ||||||| ||||||||||||    
T  3961416 tttaaaatgaataagtgggatgtccggggttcgaaccccggcctctgcacaaattgtgcattatcctttaccaaatgagttaaactc 3961502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 43440769 - 43440703
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    ||||||||||||||||||||  ||||||| |||| || | || ||||| ||||||||||||||||||    
T  43440769 tgaataagtggggtgtctggaattcgaaccccgacctctgcacatattgtgcattatcccttaccaa 43440703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 23602355 - 23602274
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||| |||||| ||||||||||||||| ||  | |||||| |||||||||| ||||| ||| |||| ||| ||||    
T  23602355 gtgaataagtgaggtgtccggggttcgaactccggtcactgcatataatatgcattattccttatcaaatgagctaagctca 23602274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 31793548 - 31793467
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||| |  | || ||||| |||||||||||||| ||| |||| ||| |||||    
T  31793548 tgaataagtggggtgtccggggttcgaaccccgacccctgcacatattgtgcattatcccttaacaaatgagctaagctcat 31793467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 34809414 - 34809365
Alignment:
Q  19 ggtgtctggggttcgaactccgatctttacatatattatgcattatccct 68  Q
    |||||||||||||||||||||   |||||||||||||||||||| |||||    
T  34809414 ggtgtctggggttcgaactcctgactttacatatattatgcattgtccct 34809365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 40273901 - 40273820
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  40273901 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 40273820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 9992682 - 9992610
Alignment:
Q  16 tggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||  ||||||||||| ||||||| |||||| || ||||||||||||||| ||| |||| ||| ||||    
T  9992682 tggggtgttcggggttcgaaccccgatctctacatacataatgcattatcccttatcaaatgagctaagctca 9992610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 18223709 - 18223783
Alignment:
Q  13 aagtggggtgtctggggttcgaactcc-gatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||| |||||||||||||| |||| ||||||||| |||||| |||||| |||||| |||||||| ||||    
T  18223709 aagtggggtgtccggggttcgaactccggatc-ttacatataatatgcaatatccc-taccaactgagttaagctca 18223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 19126824 - 19126789
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  19126824 tttaaagtgaataagtggggtgtccggggttcgaac 19126789  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 31475848 - 31475883
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  31475848 tttaaagtgaataagtggggtgtcaggggttcgaac 31475883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 4956107 - 4956173
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    |||||||||||||||||  |||||||||| |||| |  | || ||||| ||||||||||||||||||    
T  4956107 tgaataagtggggtgtccagggttcgaaccccgacccctgcacatattgtgcattatcccttaccaa 4956173  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 9498044 - 9497971
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactc 87  Q
    |||||||||||| ||||||||||| |||| |  |||||||| |||||| |||||| |||||| |||| |||||||    
T  9498044 aagtggggtgtccggggttcgaaccccgacccctacatataatatgcaatatccc-taccaattgagctaaactc 9497971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 29132036 - 29132110
Alignment:
Q  14 agtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||||||||||| ||| ||||   || |||| || |||||||||||||| || |||||||||| ||||    
T  29132036 agtggggtgtctggggttcaaaccccgactcttgcatacataatgcattatcccttgccgagtgagttaagctca 29132110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 3392545 - 3392492
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcc 66  Q
    |||||||||||||||||||||||| |||| |  |||||||| |||||| |||||    
T  3392545 aagtggggtgtctggggttcgaaccccgacccctacatataatatgcaatatcc 3392492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 8249745 - 8249704
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||||| |||||||||||| ||| |||||    
T  8249745 catatattatgcattatcctttaccaagtgagctaagctcat 8249704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16814781 - 16814744
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  16814781 aaagtgaataagtggagtgtctggggttcgaaccccga 16814744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 22965972 - 22966001
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  22965972 gtgaataagtggggtgtctggggttcgaac 22966001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 23685568 - 23685597
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  23685568 gtgaataagtggggtgtctggggttcgaac 23685597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 30644250 - 30644221
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  30644250 gtgaataagtggggtgtctggggttcgaac 30644221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 41090339 - 41090290
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcatt 62  Q
    |||||||||||| |||||| |||||||||||  |||||||| ||||||||    
T  41090339 aagtggggtgtccggggtttgaactccgatccatacatataatatgcatt 41090290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 48433725 - 48433806
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| |||||| |||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  48433725 tgaataagtggggtgtccggggtttgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 48433806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 12166162 - 12166134
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||||||||    
T  12166162 tgaataagtggggtgtctggggttcgaac 12166134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14818373 - 14818413
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||||||| ||||||| |||| ||||    
T  14818373 tttaaagtgaataagtggggtgtttggggtttgaaccccga 14818413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15265371 - 15265411
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||||||||||||||||||||| ||||||| |||| ||||    
T  15265371 tttaaagtgaataagtggggtgtttggggtttgaaccccga 15265411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24397032 - 24396992
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||| |||||||  |||||||||||||||    
T  24397032 tttaaagtgaataagtagggtgtccagggttcgaactccga 24396992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 24579300 - 24579328
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaa 35  Q
    |||||||||||||||||||||||||||||    
T  24579300 gtgaataagtggggtgtctggggttcgaa 24579328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 27263410 - 27263347
Alignment:
Q  19 ggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    |||| |||||||||||||||||| | || ||||||||||||||| | || |||||| ||||||||    
T  27263410 ggtggctggggttcgaactccgaaccttgcatatattatgcattgt-ccataccaactgagttaa 27263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 36343388 - 36343416
Alignment:
Q  1 tttaaagtgaataagtggggtgtctgggg 29  Q
    |||||||||||||||||||||||||||||    
T  36343388 tttaaagtgaataagtggggtgtctgggg 36343416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 42841796 - 42841824
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||||||||    
T  42841796 tgaataagtggggtgtctggggttcgaac 42841824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 2465948 - 2466025
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaac 85  Q
    |||||||||||||||| || |||||||||  | |||||| |||| ||||||||| |||||||||||| |||| |||||    
T  2465948 tgaataagtggggtgtatgcggttcgaacctcaatctttgcataaattatgcatcatcccttaccaaatgagctaaac 2466025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 14262736 - 14262817
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||| ||||||| ||||||||||| |||| |  | |||||||| |||||||||||||| ||| |||||||| |||||    
T  14262736 tgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatcccttatcaaatgagttaatctcat 14262817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 19424127 - 19424055
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgag 79  Q
    |||||||||||||||||| ||||||||||| |||| |  | |||||| |||||||||||||||| ||| ||||    
T  19424127 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttatcaaatgag 19424055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38021339 - 38021300
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccg 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  38021339 tttaaagtgaataagtggggtgtccggggttcgaactccg 38021300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 34940436 - 34940509
Alignment:
Q  12 taagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaact 86  Q
    ||||||||||||| ||||||||||| | || |  | |||||| ||||||||||||||||||||||||| ||||||    
T  34940436 taagtggggtgtccggggttcgaac-ctgacccctgcatataatatgcattatcccttaccaagtgagctaaact 34940509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 7438701 - 7438620
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| || |||||||| |||| |  |||| | ||| |||||||||||||||||| |||| ||| |||||    
T  7438701 tgaataagtggggtgtccggagttcgaaccccgacccctacacaaattgtgcattatcccttaccaaatgagctaagctcat 7438620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 10123068 - 10123148
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||||||||| |||||||||||| |||| |  |||| ||||| |  ||||||||||||||| |||||||| |||||    
T  10123068 tgaataagtggggtgtttggggttcgaaccccgacccctacacatattgt-aattatcccttaccaaatgagttaagctcat 10123148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 24134639 - 24134720
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  24134639 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 24134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24168587 - 24168639
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||  ||||||||    
T  24168587 tttaaggtgaataagtggggtgtctggggttcgaaccccggtccctacatata 24168639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27985051 - 27984999
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    |||||||| ||||| | | ||||| ||||||||||||||||||||||||||||    
T  27985051 tttaaagtaaataaatagagtgtccggggttcgaactccgatctttacatata 27984999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29491557 - 29491517
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  29491557 tttaaagtgaataagtggggtgtccggggttcgaaccccga 29491517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17350148 - 17350113
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  17350148 tttaaagtgaataagtggggtgtccggggttcgaac 17350113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 33844701 - 33844662
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaactccgatc 43  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  33844701 aaagtgaataagtggggtgtccggggttcgaaccccgatc 33844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 33949277 - 33949316
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaactccgatc 43  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  33949277 aaagtgaataagtggggtgtccggggttcgaaccccgatc 33949316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 39238803 - 39238768
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  39238803 tttaaagtgaataagtggggtgtccggggttcgaac 39238768  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 40209941 - 40210000
Alignment:
Q  19 ggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtga 78  Q
    ||||| ||||||||||||| ||| |  |||||||| |||||||| |||||||||||||||    
T  40209941 ggtgtttggggttcgaacttcgacccctacatataatatgcattgtcccttaccaagtga 40210000  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 8893940 - 8893874
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaa 74  Q
    |||||||||||||||| |||||||||||| |||| |  |  | ||||| ||||||||||||||||||    
T  8893940 tgaataagtggggtgtttggggttcgaaccccgacccctgtacatattgtgcattatcccttaccaa 8893874  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9931174 - 9931136
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactcc 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  9931174 tttaaggtgaataagtggggtgtttggggttcgaactcc 9931136  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 11213459 - 11213509
Alignment:
Q  3 taaagtgaataagtggggtgtctggggttcgaactccgatctttacatata 53  Q
    |||||| ||||||||||||||| |||||||||||||| | || ||||||||    
T  11213459 taaagtaaataagtggggtgtccggggttcgaactccaacctctacatata 11213509  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 47719110 - 47719167
Alignment:
Q  30 ttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||| | || ||||||||||||||||| ||||||||| |||||||| ||||    
T  47719110 ttcgaactccgaaccttgcatatattatgcattat-ccttaccaactgagttaagctca 47719167  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 48260203 - 48260237
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||| ||||||||||||||||    
T  48260203 gtgaataagtggggtgtccggggttcgaactccga 48260237  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 49251409 - 49251443
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||||||||| ||||    
T  49251409 gtgaataagtggggtgtctggggttcgaaccccga 49251443  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 50119050 - 50118977
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactc 87  Q
    |||||||||||| |||||||||||||||| |  | |||| | |||| ||| |||| |||||||||||||||||||    
T  50119050 aagtggggtgtccggggttcgaactccgacccctgcataaaatatggattgtccc-taccaagtgagttaaactc 50118977  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 4126939 - 4126898
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||| |||||||||||||||||| |||| |||||||||    
T  4126939 catatattgtgcattatcccttaccaaatgagctaaactcat 4126898  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 9639809 - 9639877
Alignment:
Q  19 ggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||| | |||||||||||||  | || ||||||||||||||| | |||||||||||||||||| ||||    
T  9639809 ggtgtccgaggttcgaactccggaccttgcatatattatgcattgt-ccttaccaagtgagttaagctca 9639877  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 12148588 - 12148621
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccga 41  Q
    |||||||||||||||||||||||| |||||||||    
T  12148588 tgaataagtggggtgtctggggtttgaactccga 12148621  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 12973333 - 12973374
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||| |||||||||||||||||| |||| |||||||||    
T  12973333 catatattgtgcattatcccttaccaaatgagctaaactcat 12973374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 21884656 - 21884627
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  21884656 gtgaataagtggggtgtctggggttcgaac 21884627  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 30649174 - 30649145
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  30649174 gtgaataagtggggtgtctggggttcgaac 30649145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 32711158 - 32711187
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  32711158 gtgaataagtggggtgtctggggttcgaac 32711187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 34702328 - 34702409
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    |||||||||| |||||| ||||||||||| |||  |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  34702328 tgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 34702409  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 38028618 - 38028585
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccg 40  Q
    ||||||||||||||||||| ||||||||||||||    
T  38028618 gtgaataagtggggtgtctagggttcgaactccg 38028585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 48497228 - 48497309
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||| ||| ||||| ||| |||||||||||  |  | || ||||| |||||||||||||||||| |||| |||||||||    
T  48497228 tgaataaatggagtgtccgggattcgaactccggcccctgcacatattgtgcattatcccttaccaaatgagctaaactcat 48497309  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 49620052 - 49619971
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| |||||  |||| |||| |  | || ||||| |||||||||||||||||| |||| ||| |||||    
T  49620052 tgaataagtggggtgtccggggtctgaaccccgacccctgcacatattgtgcattatcccttaccaaatgagctaagctcat 49619971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 52164388 - 52164461
Alignment:
Q  10 aataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||||||||||||| ||  ||||||| ||||||  | || ||||| ||||||||| |||||||| ||||||||    
T  52164388 aataagtggggtgtccggaattcgaaccccgatccctgcacatattgtgcattatctcttaccaaatgagttaa 52164461  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 52720764 - 52720703
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatccctt 69  Q
    |||||||||| |||||||||||||||||| ||  ||  |||| | |||||||||||||||||    
T  52720764 tgaataagtgtggtgtctggggttcgaaccccagtccctacacacattatgcattatccctt 52720703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 1813381 - 1813337
Alignment:
Q  19 ggtgtctggggttcgaactccg-atctttacatatattatgcatt 62  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||    
T  1813381 ggtgtttggggttcgaactccggacctttacatatattatgcatt 1813337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2643823 - 2643863
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaactccga 41  Q
    ||||| |||||||||||||||||||||||||| ||| ||||    
T  2643823 tttaaggtgaataagtggggtgtctggggttcaaaccccga 2643863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 4865808 - 4865883
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaa 83  Q
    ||||| |||||| ||||  |||||||||||||||| |  ||||||||||||||| | |||| |||||| ||||||||    
T  4865808 gtgaagaagtggagtgttcggggttcgaactccgacccctacatatattatgcaatgtccc-taccaactgagttaa 4865883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 12553278 - 12553246
Alignment:
Q  4 aaagtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||| |||||||||||    
T  12553278 aaagtgaataagtggggtgtccggggttcgaac 12553246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 14320968 - 14320924
Alignment:
Q  13 aagtggggtgtctggggttcgaactccgatctttacatatattat 57  Q
    |||||||||||| || |||||||| |||| |||||||||||||||    
T  14320968 aagtggggtgtccggagttcgaaccccgacctttacatatattat 14320924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 19396212 - 19396251
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  19396212 catatattatgcattatccc-taccaactgagttaaactca 19396251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 24631879 - 24631840
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  24631879 catatattatgcattatcc-ttaccaactgagttaaactca 24631840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 25800348 - 25800412
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttacc 72  Q
    ||||||||||||||||| |||||| |||| |||  |  |||||| ||| ||||||||||||||||    
T  25800348 tgaataagtggggtgtccggggttggaaccccggaccctacataaattgtgcattatcccttacc 25800412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 27160535 - 27160495
Alignment:
Q  48 catatattatgcattatcccttaccaagtgagttaaactca 88  Q
    |||||||||||||||||||||||| || |||| ||||||||    
T  27160535 catatattatgcattatcccttactaaatgagctaaactca 27160495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 32874392 - 32874447
Alignment:
Q  30 ttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaact 86  Q
    ||||||| |||| ||||||||||||||||||||  |||||||||| |||| ||||||    
T  32874392 ttcgaaccccgaactttacatatattatgcatt-gcccttaccaactgagctaaact 32874447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 38491113 - 38491045
Alignment:
Q  20 gtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactca 88  Q
    ||||||||| |||||||||||| || | |||| |||||||||| ||  ||| |||||||||||| ||||    
T  38491113 gtgtctgggattcgaactccgacctctgcataaattatgcattgtctgttatcaagtgagttaagctca 38491045  T

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Target: scaffold0072 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 17748 - 17804
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattat 64  Q
    |||||||||| |||||||| |||||||||||| |||  | |||||||||||||||||    
T  17748 tgaataagtgaggtgtctgaggttcgaactccaatccctgcatatattatgcattat 17804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 17939 - 17974
Alignment:
Q  1 tttaaagtgaataagtggggtgtctggggttcgaac 36  Q
    |||||||||||||||||| |||||||||||||||||    
T  17939 tttaaagtgaataagtggagtgtctggggttcgaac 17974  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 1120 - 1091
Alignment:
Q  7 gtgaataagtggggtgtctggggttcgaac 36  Q
    ||||||||||||||||||||||||||||||    
T  1120 gtgaataagtggggtgtctggggttcgaac 1091  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 419792 - 419711
Alignment:
Q  8 tgaataagtggggtgtctggggttcgaactccgatctttacatatattatgcattatcccttaccaagtgagttaaactcat 89  Q
    ||||||||||||||||| ||||||||||| |||  |  | || ||||| | |||||||||||||||| |||| ||| |||||    
T  419792 tgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgttcattatcccttaccaaatgagctaagctcat 419711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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