View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0479_low_17 (Length: 210)
Name: NF0479_low_17
Description: NF0479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0479_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 34122524 - 34122664
Alignment:
| Q |
21 |
tatatgggaaagatgttgtaataagaatcatcaatagatgaacaataacaacaatgtccatcaatgtatagtgtcattcttagggtaacatatttttggt |
120 |
Q |
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| T |
34122524 |
tatatgggaaagatgttgtaataagaatcatcaatagatgaacaataacaacaatgtccatcaatgtatagtgtcattcttagggtaacatatttttggt |
34122623 |
T |
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| Q |
121 |
tgattgaaaaattcattttatttttataacagtagaaatat |
161 |
Q |
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| T |
34122624 |
tgattgaaaaattcattttatttttataacaggagaaatat |
34122664 |
T |
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