View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0482_high_10 (Length: 283)
Name: NF0482_high_10
Description: NF0482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0482_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 29 - 263
Target Start/End: Complemental strand, 44995740 - 44995506
Alignment:
| Q |
29 |
agatgtaagcataaaattcagtattgttcattcatatggttttaaagtgcagctgtggttatgctatgaccctatatactgtcgaaaaatgcagctaatg |
128 |
Q |
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| T |
44995740 |
agatgtaagcataaaattcagtattgttcgttcatatggttttaaagtgcagctgtggttatgctatgaccctatatactgtcgaaaaatgcagctaatg |
44995641 |
T |
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| Q |
129 |
cgatcaaaattgtcgttgtgatacttcatagactttaaaattattcatatttaggctcttgataggtatgtatgtgactattgttgtgttttcgtgtaag |
228 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44995640 |
cgatcaaaattgtcgttgtgatactgcatagactttaaaattattcatatttaggctcttgataggtatgtatgtgactattgttgtgttttcgtgtaag |
44995541 |
T |
|
| Q |
229 |
gtttgggtttatgggaatagcttcaagtctgtgct |
263 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
44995540 |
gtttgggtttatgggaatagcttcaagtctgtgct |
44995506 |
T |
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