View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0482_low_22 (Length: 303)
Name: NF0482_low_22
Description: NF0482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0482_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 44360910 - 44361060
Alignment:
| Q |
84 |
gatcttccatcatatgttacctcttctgcacctttgactccaaaacttaattccaatattgctaccaacatcatcatcaaacacacccatttttccatct |
183 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44360910 |
gatcttccatcatatgttacctcttctgcacctttgactccaaaacttaattccaatattgctaccaacatcatcatcaaacacacccatttttccatct |
44361009 |
T |
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| Q |
184 |
ccactaatttaatttgtcatacctctttagttatcttaataatactcctat |
234 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
44361010 |
ccactaatttaatttgtcacacctctttagttatcttaataatactcctat |
44361060 |
T |
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