View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0482_low_38 (Length: 233)
Name: NF0482_low_38
Description: NF0482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0482_low_38 |
 |  |
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[»] chr3 (4 HSPs) |
 |  |
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[»] scaffold0101 (4 HSPs) |
 |  |  |
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[»] scaffold1701 (1 HSPs) |
 |  |  |
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[»] scaffold0323 (1 HSPs) |
 |  |  |
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[»] scaffold0051 (2 HSPs) |
 |  |  |
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[»] scaffold0193 (1 HSPs) |
 |  |  |
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[»] scaffold0040 (1 HSPs) |
 |  |  |
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[»] scaffold0270 (1 HSPs) |
 |  |  |
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[»] scaffold0081 (1 HSPs) |
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[»] scaffold0022 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 10792046 - 10791892
Alignment:
Q |
90 |
atcatcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctct-----------ttt |
178 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
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|
T |
10792046 |
atcatcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagttatatatgactgcgagtcatacttttgctcttactttgctccttt |
10791947 |
T |
 |
Q |
179 |
tagttacttttactcctttcaccatccccttcttctaccttacgatccagaatac |
233 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
10791946 |
tagttacttttactcttttcaccatccccttcttctaccttacgatccaaaatac |
10791892 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 224
Target Start/End: Original strand, 14683746 - 14683886
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctctt------------tttagtt |
183 |
Q |
|
|
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| |
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|
T |
14683746 |
aaaaacaactgttccatgcgatgattgacatctgtccagtatcaaaagctatatatgaccctgagtcatacttttactcttacttcatttctctttagtc |
14683845 |
T |
 |
Q |
184 |
acttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
| ||||||| |||||||||||||||||||||||||||||| |
|
|
T |
14683846 |
atttttactattttcaccatccccttcttctaccttacgat |
14683886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 7342060 - 7342121
Alignment:
Q |
93 |
atcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
|||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
7342060 |
atcaaaaacaaccgttccatgcgatgattgacatctgtccaatatcaaaagctatatatgac |
7342121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 7342157 - 7342203
Alignment:
Q |
178 |
ttagttacttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
|||||| |||||||| ||||||||||||||||||||||||| |||| |
|
|
T |
7342157 |
ttagtttattttactcttttcaccatccccttcttctaccttgcgat |
7342203 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 90 - 227
Target Start/End: Original strand, 41369247 - 41369395
Alignment:
Q |
90 |
atcatcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctctt-----------tt |
178 |
Q |
|
|
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
T |
41369247 |
atcataaaaaacaactgttccacgcgatgattgacatctgtccagtatcaaaagctatatatgactatgagtcatacttttgctcttacttcatttcctt |
41369346 |
T |
 |
Q |
179 |
tagttacttttactcctttcaccatccccttcttctaccttacgatcca |
227 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
41369347 |
tagttacttttactcttttcaccatccccttcttctaccttacgatcca |
41369395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 22085941 - 22085857
Alignment:
Q |
92 |
catcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctctt |
176 |
Q |
|
|
||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |
|
|
T |
22085941 |
catcaaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaagctatatatgaccctgagtcatacttttactctt |
22085857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 22085836 - 22085798
Alignment:
Q |
186 |
ttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
|||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
22085836 |
ttttactcttttcaccatccccttcttctaacttacgat |
22085798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 227
Target Start/End: Complemental strand, 1734852 - 1734704
Alignment:
Q |
90 |
atcatcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctct-----------ttt |
178 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
T |
1734852 |
atcatcaaaaacaactattccacgcgatgattgacatctgtccaatatcaaaagctatatatgactctgagtcatacttttgctcttacttcgtttcttt |
1734753 |
T |
 |
Q |
179 |
tagttacttttactcctttcaccatccccttcttctaccttacgatcca |
227 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||| |||||||||| |
|
|
T |
1734752 |
tagttacttttactcttttcaccatccccttcttctactttacgatcca |
1734704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 22333995 - 22334051
Alignment:
Q |
95 |
caaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatat |
151 |
Q |
|
|
|||||||||| | |||||||||| |||||||||||| | ||||||| ||||||||| |
|
|
T |
22333995 |
caaaaacaaccgttccacgcgattgttgacatctgtcaaatatcaaaggctatatat |
22334051 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 14324305 - 14324449
Alignment:
Q |
92 |
catcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgc------------tcttttt |
179 |
Q |
|
|
||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||| ||| |
|
|
T |
14324305 |
catcaaaaacaactgttccatgcgatgattgacatctgttcagtatcaaaagctatatatgaccctgagtcatacttttacttttacttcgtttctcttt |
14324404 |
T |
 |
Q |
180 |
agttacttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
T |
14324405 |
agttatttttactcttttcaccatccccttcttctaccttacgat |
14324449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101 (Bit Score: 53; Significance: 1e-21; HSPs: 4)
Name: scaffold0101
Description:
Target: scaffold0101; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 46862 - 46946
Alignment:
Q |
92 |
catcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctctt |
176 |
Q |
|
|
||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |
|
|
T |
46862 |
catcaaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaagctatatatgaccctgagtcatacttttactctt |
46946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 51500 - 51584
Alignment:
Q |
92 |
catcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctctt |
176 |
Q |
|
|
||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |
|
|
T |
51500 |
catcaaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaagctatatatgaccctgagtcatacttttactctt |
51584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 46967 - 47005
Alignment:
Q |
186 |
ttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
|||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
46967 |
ttttactcttttcaccatccccttcttctaacttacgat |
47005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 51605 - 51643
Alignment:
Q |
186 |
ttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
|||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
51605 |
ttttactcttttcaccatccccttcttctaacttacgat |
51643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 24950672 - 24950588
Alignment:
Q |
92 |
catcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctctt |
176 |
Q |
|
|
||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||| |
|
|
T |
24950672 |
catcaaaaacaaccgttccatgcgatgattgacatctgtccaatatcaaaagctatatatgaccctgagtcatatttttactctt |
24950588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 23190806 - 23190864
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||| |||| ||||||||||||||||||| | |||||| |||||||||||| |
|
|
T |
23190806 |
aaaaacaactgttccatgcgatgattgacatctgtcaaacatcaaaggctatatatgac |
23190864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 23612061 - 23612119
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||| |||| ||||||||||||||||||| | |||||| |||||||||||| |
|
|
T |
23612061 |
aaaaacaactgttccatgcgatgattgacatctgtcaaacatcaaaggctatatatgac |
23612119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 23615716 - 23615774
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||| |||| ||||||||||||||||||| | |||||| |||||||||||| |
|
|
T |
23615716 |
aaaaacaactgttccatgcgatgattgacatctgtcaaacatcaaaggctatatatgac |
23615774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 24950565 - 24950527
Alignment:
Q |
186 |
ttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||| |
|
|
T |
24950565 |
ttttactcttttcaccatccccttcttctaccttacgat |
24950527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1701 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1701
Description:
Target: scaffold1701; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 1457 - 1353
Alignment:
Q |
132 |
cagtatcaaaagctatatatgactgcgagtcatacttttgctctt------------tttagttacttttactcctttcaccatccccttcttctacctt |
219 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||| |
|
|
T |
1457 |
cagtatcaaaagctatatatgaccctgagtcatacttttactcttacttcgtttctctttagttatttttactcttttcaccatccccttcttctacctt |
1358 |
T |
 |
Q |
220 |
acgat |
224 |
Q |
|
|
||||| |
|
|
T |
1357 |
acgat |
1353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0323 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0323
Description:
Target: scaffold0323; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 4066 - 4011
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatat |
151 |
Q |
|
|
||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
T |
4066 |
aaaaacaactgttccatgcgatgattgacatctgtccaatatcaaaggctatatat |
4011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 79333 - 79275
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||| |||| ||||||||||||||||||||| |||||| |||||||||||| |
|
|
T |
79333 |
aaaaacaactgttccatgcgatgattgacatctgtccaacatcaaaggctatatatgac |
79275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 79233 - 79195
Alignment:
Q |
186 |
ttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
T |
79233 |
ttttactcttttcaccatctccttcttctaccttacgat |
79195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0193
Description:
Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 27356 - 27437
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctcttt |
177 |
Q |
|
|
||||||||||| ||| ||||| ||||||||||||| | ||||||| |||||||||||| ||||||||||||| |||||| |
|
|
T |
27356 |
aaaaacaactgtcccatgcgatcattgacatctgtcaaatatcaaaggctatatatgaccttgagtcatacttttactcttt |
27437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 14557476 - 14557536
Alignment:
Q |
94 |
tcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||||| |||| ||||||||||||||||||| | |||||| |||||||||||| |
|
|
T |
14557476 |
tcaaaaacaactgttccatgcgatgattgacatctgtcaggcatcaaaggctatatatgac |
14557536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 13277812 - 13277870
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||| ||||||||||| |||||||||||| | |||||| |||||||||||| |
|
|
T |
13277812 |
aaaaacaactgttccacgcgatggttgacatctgtcaaacatcaaaggctatatatgac |
13277870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 40875 - 40796
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctct |
175 |
Q |
|
|
||||||||||| ||||||||||| |||||||||||| | |||||| |||||||||||| | ||||||||||| |||| |
|
|
T |
40875 |
aaaaacaactgttccacgcgatggttgacatctgtcaaacatcaaaggctatatatgacctcaggtcatacttttactct |
40796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 23496093 - 23496035
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||| |||| ||||||||||||||||||| | |||||| |||||||||||| |
|
|
T |
23496093 |
aaaaacaactgttccatgcgatgattgacatctgtcaaacatcaaaggctatatatgac |
23496035 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 23495992 - 23495954
Alignment:
Q |
186 |
ttttactcctttcaccatccccttcttctaccttacgat |
224 |
Q |
|
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
T |
23495992 |
ttttactcttttcaccatctccttcttctaccttacgat |
23495954 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 21529855 - 21529793
Alignment:
Q |
92 |
catcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||||| | |||| ||||| |||||||||||| | ||||||| |||||||||||| |
|
|
T |
21529855 |
catcaaaaacaaccgttccatgcgatcgttgacatctgtcaaatatcaaaggctatatatgac |
21529793 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0270
Description:
Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 15798 - 15858
Alignment:
Q |
94 |
tcaaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||||||||||| ||||||||||| ||| |||||||| |||||| |||||||||||| |
|
|
T |
15798 |
tcaaaaacaactgttccacgcgatggttgtcatctgtcagacatcaaaggctatatatgac |
15858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:
Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 44842 - 44922
Alignment:
Q |
96 |
aaaaacaactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgactgcgagtcatacttttgctctt |
176 |
Q |
|
|
||||||||| | ||| ||||| | ||||||||||| | ||||||| |||||||||||| ||||||||||||| ||||| |
|
|
T |
44842 |
aaaaacaaccgtcccatgcgatcaatgacatctgtcaaatatcaaaggctatatatgaccttgagtcatacttttactctt |
44922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 58034 - 57982
Alignment:
Q |
102 |
aactgctccacgcgatgattgacatctgtccagtatcaaaagctatatatgac |
154 |
Q |
|
|
||||| ||||||||||| |||||||||||| | |||||| |||||||||||| |
|
|
T |
58034 |
aactgttccacgcgatggttgacatctgtcaaacatcaaaggctatatatgac |
57982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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