View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0484_low_17 (Length: 258)

Name: NF0484_low_17
Description: NF0484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0484_low_17
NF0484_low_17
[»] chr6 (54 HSPs)
chr6 (30-244)||(3815031-3815245)
chr6 (83-244)||(12221921-12222085)
chr6 (83-244)||(1346931-1347090)
chr6 (83-244)||(1354764-1354923)
chr6 (83-240)||(29355862-29356022)
chr6 (83-243)||(2166417-2166579)
chr6 (83-243)||(2178050-2178212)
chr6 (87-244)||(20400634-20400791)
chr6 (83-235)||(9161099-9161252)
chr6 (88-234)||(32728169-32728314)
chr6 (107-244)||(13905011-13905146)
chr6 (114-242)||(6024202-6024332)
chr6 (87-206)||(33138838-33138957)
chr6 (143-244)||(8409210-8409311)
chr6 (89-244)||(7947384-7947539)
chr6 (89-240)||(15866052-15866201)
chr6 (126-241)||(1941825-1941940)
chr6 (92-240)||(24097552-24097696)
chr6 (83-226)||(18277200-18277343)
chr6 (83-193)||(26097178-26097286)
chr6 (86-233)||(28007604-28007750)
chr6 (85-235)||(12889402-12889553)
chr6 (83-193)||(25557743-25557851)
chr6 (137-241)||(14553482-14553585)
chr6 (164-244)||(14975168-14975248)
chr6 (89-225)||(23240837-23240971)
chr6 (85-180)||(19340859-19340954)
chr6 (87-244)||(23930138-23930294)
chr6 (83-219)||(17432332-17432476)
chr6 (102-244)||(24734600-24734753)
chr6 (183-241)||(8417442-8417500)
chr6 (83-148)||(13267788-13267853)
chr6 (93-201)||(32579436-32579543)
chr6 (190-244)||(33922942-33922996)
chr6 (86-244)||(3116139-3116298)
chr6 (139-239)||(27855500-27855601)
chr6 (157-229)||(4136598-4136670)
chr6 (83-138)||(6808468-6808523)
chr6 (106-235)||(11849031-11849159)
chr6 (190-241)||(12063437-12063488)
chr6 (83-155)||(12885967-12886041)
chr6 (83-153)||(383767-383837)
chr6 (137-235)||(2755485-2755583)
chr6 (83-154)||(12892064-12892137)
chr6 (137-233)||(32068074-32068167)
chr6 (146-219)||(17448316-17448389)
chr6 (141-178)||(24751139-24751176)
chr6 (167-243)||(22967139-22967215)
chr6 (167-243)||(23821178-23821254)
chr6 (209-244)||(19649300-19649335)
chr6 (104-212)||(15865885-15865992)
chr6 (83-124)||(16895704-16895745)
chr6 (85-133)||(10734914-10734962)
chr6 (140-172)||(14341134-14341166)
[»] chr3 (76 HSPs)
chr3 (83-244)||(40272819-40272980)
chr3 (86-244)||(46421044-46421205)
chr3 (83-240)||(13628797-13628957)
chr3 (83-244)||(13730609-13730772)
chr3 (83-244)||(8247693-8247857)
chr3 (83-244)||(26869696-26869856)
chr3 (83-244)||(29366727-29366890)
chr3 (83-244)||(1217079-1217238)
chr3 (88-244)||(26573117-26573272)
chr3 (83-244)||(22122924-22123083)
chr3 (83-244)||(16735430-16735590)
chr3 (83-244)||(22609756-22609915)
chr3 (87-242)||(6411833-6411987)
chr3 (89-234)||(34420656-34420802)
chr3 (83-240)||(39203509-39203664)
chr3 (83-244)||(12914042-12914203)
chr3 (83-244)||(52926226-52926378)
chr3 (83-225)||(516417-516562)
chr3 (86-244)||(45948848-45949008)
chr3 (85-235)||(53996574-53996725)
chr3 (125-243)||(4495713-4495831)
chr3 (83-230)||(7942993-7943140)
chr3 (135-244)||(7696946-7697053)
chr3 (93-244)||(9607192-9607345)
chr3 (83-244)||(5173726-5173889)
chr3 (83-201)||(14986989-14987109)
chr3 (149-244)||(10870025-10870119)
chr3 (88-218)||(54374357-54374488)
chr3 (83-193)||(54484730-54484841)
chr3 (83-204)||(31592878-31592997)
chr3 (83-205)||(10795430-10795554)
chr3 (125-222)||(54032608-54032705)
chr3 (92-235)||(28904941-28905084)
chr3 (129-244)||(45620881-45620996)
chr3 (88-234)||(25944468-25944615)
chr3 (96-231)||(30928167-30928302)
chr3 (85-235)||(44403564-44403715)
chr3 (85-235)||(19731000-19731150)
chr3 (129-231)||(39211992-39212094)
chr3 (83-244)||(25517177-25517341)
chr3 (83-237)||(33235526-33235681)
chr3 (83-180)||(45786221-45786320)
chr3 (103-180)||(9276317-9276393)
chr3 (85-169)||(34771373-34771457)
chr3 (85-222)||(45139487-45139624)
chr3 (83-180)||(49013480-49013579)
chr3 (83-175)||(353356-353450)
chr3 (92-222)||(33926094-33926224)
chr3 (83-169)||(15797284-15797370)
chr3 (85-201)||(55401208-55401325)
chr3 (133-242)||(26782357-26782466)
chr3 (159-235)||(53062036-53062112)
chr3 (86-244)||(829452-829609)
chr3 (88-174)||(31904868-31904955)
chr3 (113-180)||(47624095-47624161)
chr3 (85-235)||(19751576-19751726)
chr3 (131-242)||(21875011-21875116)
chr3 (83-169)||(26292394-26292480)
chr3 (151-244)||(12525399-12525489)
chr3 (161-244)||(35417906-35417988)
chr3 (85-214)||(52428479-52428616)
chr3 (90-200)||(43114882-43114994)
chr3 (137-233)||(1121286-1121382)
chr3 (96-227)||(8410887-8411016)
chr3 (83-151)||(24578007-24578075)
chr3 (136-244)||(29106539-29106646)
chr3 (83-142)||(24851308-24851367)
chr3 (88-174)||(31672752-31672839)
chr3 (83-125)||(47624207-47624249)
chr3 (90-171)||(4537096-4537179)
chr3 (83-131)||(10484623-10484671)
chr3 (85-180)||(50624962-50625057)
chr3 (95-141)||(10300583-10300629)
chr3 (83-133)||(30452895-30452945)
chr3 (144-234)||(32418221-32418311)
chr3 (86-151)||(24577917-24577982)
[»] chr1 (92 HSPs)
chr1 (83-240)||(46247960-46248117)
chr1 (83-241)||(46991797-46991955)
chr1 (83-244)||(34725105-34725264)
chr1 (83-244)||(18944633-18944797)
chr1 (83-244)||(14617028-14617189)
chr1 (83-240)||(41319813-41319970)
chr1 (96-244)||(18724565-18724712)
chr1 (90-242)||(23768334-23768486)
chr1 (87-244)||(30395737-30395896)
chr1 (83-244)||(32632564-32632724)
chr1 (87-238)||(6925096-6925247)
chr1 (83-244)||(10668210-10668378)
chr1 (83-241)||(20004097-20004257)
chr1 (88-244)||(47214501-47214655)
chr1 (86-240)||(27474275-27474428)
chr1 (83-244)||(38478289-38478448)
chr1 (90-236)||(27201645-27201793)
chr1 (96-244)||(11596504-11596650)
chr1 (105-236)||(20036218-20036350)
chr1 (85-235)||(35117774-35117927)
chr1 (85-234)||(44485119-44485267)
chr1 (83-244)||(45402085-45402247)
chr1 (86-244)||(2435796-2435954)
chr1 (83-241)||(8197036-8197194)
chr1 (83-244)||(45812544-45812703)
chr1 (98-234)||(25468285-25468421)
chr1 (105-244)||(19932782-19932920)
chr1 (83-244)||(9939450-9939615)
chr1 (83-244)||(18741964-18742129)
chr1 (83-236)||(19414437-19414588)
chr1 (83-218)||(35005139-35005276)
chr1 (85-236)||(6983820-6983969)
chr1 (89-244)||(12126850-12127003)
chr1 (88-234)||(19701570-19701717)
chr1 (86-220)||(35253197-35253329)
chr1 (83-173)||(4349699-4349789)
chr1 (130-244)||(4430080-4430194)
chr1 (113-244)||(22930106-22930235)
chr1 (137-232)||(22327101-22327196)
chr1 (137-235)||(17470407-17470505)
chr1 (85-244)||(35019221-35019378)
chr1 (85-235)||(10378744-10378884)
chr1 (85-234)||(39214967-39215117)
chr1 (135-244)||(34679278-34679386)
chr1 (85-236)||(15511157-15511311)
chr1 (137-244)||(33222974-33223080)
chr1 (157-244)||(25290153-25290242)
chr1 (85-178)||(20999859-20999952)
chr1 (138-235)||(50760288-50760385)
chr1 (89-244)||(50811930-50812085)
chr1 (87-166)||(15505632-15505710)
chr1 (121-244)||(18335333-18335456)
chr1 (89-223)||(19974087-19974221)
chr1 (121-235)||(27136696-27136811)
chr1 (88-218)||(45264411-45264542)
chr1 (83-193)||(31382221-31382330)
chr1 (166-235)||(2435983-2436052)
chr1 (85-234)||(23371124-23371271)
chr1 (135-244)||(24564334-24564443)
chr1 (83-180)||(1517318-1517416)
chr1 (190-244)||(40424732-40424786)
chr1 (90-244)||(43207480-43207640)
chr1 (92-224)||(31272397-31272522)
chr1 (183-244)||(34714613-34714674)
chr1 (135-235)||(52910216-52910317)
chr1 (85-180)||(23796519-23796614)
chr1 (86-170)||(42304217-42304303)
chr1 (85-168)||(43768205-43768288)
chr1 (83-171)||(31442396-31442485)
chr1 (126-244)||(10163749-10163867)
chr1 (109-170)||(21910682-21910743)
chr1 (88-202)||(22324925-22325039)
chr1 (83-143)||(4587570-4587630)
chr1 (144-244)||(18335914-18336014)
chr1 (96-180)||(20169109-20169193)
chr1 (83-139)||(50606498-50606554)
chr1 (146-241)||(14987989-14988084)
chr1 (137-171)||(46859129-46859163)
chr1 (85-233)||(19656114-19656263)
chr1 (171-236)||(25554817-25554882)
chr1 (106-170)||(21723747-21723811)
chr1 (87-146)||(50548535-50548594)
chr1 (85-139)||(30555210-30555264)
chr1 (144-230)||(49722641-49722726)
chr1 (88-153)||(4249455-4249520)
chr1 (88-153)||(4249779-4249844)
chr1 (88-153)||(4250103-4250168)
chr1 (170-243)||(22151495-22151568)
chr1 (183-224)||(43768168-43768209)
chr1 (91-155)||(4430014-4430078)
chr1 (212-240)||(21723658-21723686)
chr1 (89-133)||(33594144-33594188)
[»] chr8 (61 HSPs)
chr8 (83-244)||(36720763-36720924)
chr8 (83-241)||(28817633-28817791)
chr8 (83-244)||(35261646-35261807)
chr8 (83-244)||(44530116-44530277)
chr8 (83-244)||(12670257-12670416)
chr8 (83-244)||(39461001-39461164)
chr8 (83-244)||(13160669-13160829)
chr8 (83-244)||(18164767-18164927)
chr8 (83-244)||(7136534-7136697)
chr8 (83-244)||(30454104-30454263)
chr8 (88-244)||(2626486-2626645)
chr8 (83-244)||(17823543-17823704)
chr8 (83-244)||(29521692-29521853)
chr8 (83-242)||(12625858-12626018)
chr8 (83-238)||(45071238-45071392)
chr8 (83-240)||(8897771-8897928)
chr8 (83-242)||(20284076-20284239)
chr8 (83-244)||(6760789-6760952)
chr8 (83-242)||(21070704-21070868)
chr8 (89-244)||(44781517-44781673)
chr8 (87-234)||(24365071-24365218)
chr8 (85-244)||(8483947-8484105)
chr8 (88-235)||(22598133-22598279)
chr8 (103-244)||(20869527-20869664)
chr8 (83-240)||(25250493-25250652)
chr8 (83-244)||(28407383-28407531)
chr8 (85-210)||(5135299-5135423)
chr8 (83-236)||(26954107-26954263)
chr8 (85-235)||(44742527-44742678)
chr8 (88-194)||(29877111-29877217)
chr8 (86-212)||(389642-389770)
chr8 (86-229)||(31457155-31457297)
chr8 (144-241)||(11748269-11748366)
chr8 (112-232)||(35105902-35106023)
chr8 (95-241)||(24245421-24245565)
chr8 (83-193)||(20869941-20870053)
chr8 (87-244)||(40604917-40605073)
chr8 (136-244)||(14018029-14018136)
chr8 (83-180)||(16225050-16225149)
chr8 (90-244)||(42083712-42083866)
chr8 (86-180)||(5689662-5689756)
chr8 (83-180)||(10857859-10857957)
chr8 (89-200)||(17250888-17251001)
chr8 (117-225)||(23000260-23000365)
chr8 (89-169)||(19729382-19729462)
chr8 (113-235)||(11000986-11001109)
chr8 (83-150)||(26102578-26102645)
chr8 (150-232)||(30962847-30962929)
chr8 (136-233)||(36918102-36918199)
chr8 (83-139)||(35107318-35107374)
chr8 (83-164)||(26457776-26457855)
chr8 (83-133)||(27507988-27508038)
chr8 (83-124)||(27468099-27468140)
chr8 (183-220)||(27635020-27635057)
chr8 (83-203)||(33866957-33867080)
chr8 (110-180)||(43942355-43942427)
chr8 (125-169)||(23286374-23286418)
chr8 (191-242)||(40607839-40607890)
chr8 (83-154)||(16013511-16013584)
chr8 (83-139)||(18595910-18595966)
chr8 (214-242)||(23286431-23286459)
[»] chr7 (80 HSPs)
chr7 (83-244)||(11617595-11617756)
chr7 (83-244)||(2541026-2541188)
chr7 (83-244)||(42798636-42798797)
chr7 (83-244)||(21172016-21172175)
chr7 (83-244)||(19426897-19427057)
chr7 (83-244)||(48735129-48735289)
chr7 (83-244)||(32758228-32758387)
chr7 (83-244)||(35334823-35334982)
chr7 (83-244)||(27629601-27629762)
chr7 (83-244)||(42805491-42805654)
chr7 (83-242)||(22698974-22699136)
chr7 (83-244)||(10693080-10693239)
chr7 (83-242)||(43557441-43557603)
chr7 (83-237)||(33871917-33872070)
chr7 (114-244)||(46354161-46354293)
chr7 (83-207)||(7879642-7879766)
chr7 (83-240)||(47716430-47716589)
chr7 (83-229)||(42391107-42391251)
chr7 (105-235)||(14099035-14099165)
chr7 (105-235)||(14409052-14409182)
chr7 (87-244)||(40463844-40464000)
chr7 (83-243)||(34626215-34626374)
chr7 (85-244)||(23419683-23419841)
chr7 (86-244)||(47077865-47078021)
chr7 (85-250)||(19265777-19265939)
chr7 (83-235)||(29907393-29907546)
chr7 (97-235)||(19266426-19266564)
chr7 (86-220)||(38262206-38262340)
chr7 (83-212)||(18512460-18512588)
chr7 (90-242)||(5180169-5180323)
chr7 (85-244)||(28362155-28362312)
chr7 (83-244)||(42476840-42476999)
chr7 (126-244)||(48123534-48123651)
chr7 (86-244)||(14732831-14732990)
chr7 (85-225)||(18747472-18747613)
chr7 (96-236)||(13805077-13805216)
chr7 (137-236)||(7644931-7645030)
chr7 (137-244)||(12473271-12473378)
chr7 (120-240)||(8148989-8149110)
chr7 (91-235)||(42101899-42102044)
chr7 (83-214)||(31591116-31591245)
chr7 (115-234)||(6736867-6736984)
chr7 (83-232)||(11741774-11741921)
chr7 (88-236)||(39123865-39124018)
chr7 (86-199)||(1408469-1408582)
chr7 (81-244)||(2662941-2663099)
chr7 (95-213)||(35203437-35203557)
chr7 (85-235)||(16341254-16341405)
chr7 (85-207)||(21566439-21566562)
chr7 (157-244)||(42495917-42496003)
chr7 (138-244)||(1423972-1424078)
chr7 (87-180)||(23231588-23231681)
chr7 (119-244)||(28078175-28078299)
chr7 (84-180)||(38604558-38604654)
chr7 (91-244)||(3469190-3469346)
chr7 (169-244)||(7193052-7193127)
chr7 (157-244)||(18327001-18327087)
chr7 (85-228)||(32233144-32233286)
chr7 (166-243)||(7794596-7794673)
chr7 (83-155)||(27889323-27889395)
chr7 (83-180)||(35787276-35787372)
chr7 (95-235)||(44123641-44123780)
chr7 (83-244)||(25198689-25198854)
chr7 (86-155)||(36267827-36267897)
chr7 (103-168)||(33500556-33500623)
chr7 (85-168)||(39093448-39093532)
chr7 (157-244)||(5814438-5814525)
chr7 (89-180)||(21139761-21139851)
chr7 (87-175)||(13792161-13792250)
chr7 (167-236)||(22065563-22065632)
chr7 (86-183)||(23065935-23066032)
chr7 (203-244)||(29140487-29140528)
chr7 (165-244)||(21447557-21447636)
chr7 (142-235)||(43852026-43852111)
chr7 (83-155)||(45018930-45019006)
chr7 (85-196)||(27697452-27697565)
chr7 (136-208)||(15108457-15108528)
chr7 (209-241)||(28685267-28685299)
chr7 (83-123)||(36602535-36602575)
chr7 (88-124)||(42495874-42495910)
[»] chr2 (74 HSPs)
chr2 (83-244)||(8455323-8455484)
chr2 (83-244)||(10543665-10543828)
chr2 (83-244)||(14530285-14530448)
chr2 (83-244)||(9671147-9671307)
chr2 (86-244)||(12023929-12024086)
chr2 (86-244)||(11514403-11514560)
chr2 (83-241)||(24200630-24200790)
chr2 (83-244)||(21779268-21779427)
chr2 (83-240)||(17623535-17623692)
chr2 (83-240)||(17667973-17668130)
chr2 (83-241)||(23397736-23397892)
chr2 (83-220)||(10546153-10546291)
chr2 (83-244)||(25079724-25079886)
chr2 (83-244)||(25249745-25249905)
chr2 (90-242)||(17896228-17896381)
chr2 (83-236)||(40416878-40417031)
chr2 (83-244)||(39914313-39914474)
chr2 (83-220)||(14444720-14444856)
chr2 (83-244)||(27573588-27573748)
chr2 (110-233)||(5450263-5450387)
chr2 (96-236)||(32781308-32781448)
chr2 (85-244)||(4516360-4516518)
chr2 (113-240)||(22371028-22371152)
chr2 (114-235)||(23145736-23145857)
chr2 (114-235)||(23557526-23557647)
chr2 (88-244)||(19977726-19977882)
chr2 (87-235)||(21377085-21377232)
chr2 (86-244)||(24859998-24860154)
chr2 (87-233)||(5841006-5841154)
chr2 (83-240)||(7214505-7214664)
chr2 (85-231)||(17380247-17380391)
chr2 (83-180)||(40762241-40762338)
chr2 (88-244)||(14544030-14544189)
chr2 (96-235)||(33795261-33795400)
chr2 (92-234)||(99281-99421)
chr2 (88-222)||(19614981-19615116)
chr2 (86-243)||(26684630-26684789)
chr2 (88-233)||(31158451-31158598)
chr2 (83-195)||(36871509-36871619)
chr2 (139-241)||(17705465-17705567)
chr2 (83-176)||(25632544-25632637)
chr2 (137-235)||(29419946-29420048)
chr2 (86-226)||(25641487-25641626)
chr2 (85-236)||(44643497-44643649)
chr2 (135-235)||(44521432-44521532)
chr2 (86-215)||(17471544-17471675)
chr2 (156-239)||(44604826-44604908)
chr2 (92-234)||(45235833-45235976)
chr2 (89-171)||(24890451-24890533)
chr2 (88-180)||(30826068-30826158)
chr2 (88-226)||(31821355-31821491)
chr2 (90-234)||(4795730-4795876)
chr2 (91-202)||(15296421-15296533)
chr2 (83-157)||(23488535-23488611)
chr2 (86-146)||(31525771-31525831)
chr2 (135-217)||(2003595-2003678)
chr2 (209-244)||(27466263-27466298)
chr2 (88-222)||(44449395-44449529)
chr2 (83-125)||(124921-124963)
chr2 (83-125)||(22371198-22371240)
chr2 (86-180)||(30864427-30864520)
chr2 (83-133)||(34766333-34766383)
chr2 (83-133)||(40579756-40579806)
chr2 (211-244)||(39189556-39189589)
chr2 (136-172)||(12315712-12315748)
chr2 (189-244)||(35017785-35017840)
chr2 (84-146)||(31523296-31523358)
chr2 (83-133)||(34080179-34080229)
chr2 (88-170)||(39499242-39499324)
chr2 (83-133)||(41409940-41409990)
chr2 (89-142)||(4794871-4794924)
chr2 (173-234)||(34752759-34752820)
chr2 (166-226)||(4852304-4852364)
chr2 (83-131)||(8575975-8576023)
[»] chr5 (64 HSPs)
chr5 (83-244)||(38879548-38879711)
chr5 (83-244)||(24448857-24449018)
chr5 (83-244)||(41014286-41014446)
chr5 (83-244)||(43334169-43334332)
chr5 (83-244)||(4619111-4619274)
chr5 (83-244)||(8169991-8170150)
chr5 (90-242)||(27328721-27328875)
chr5 (83-224)||(32703411-32703550)
chr5 (83-244)||(35710280-35710439)
chr5 (89-236)||(19142956-19143102)
chr5 (83-244)||(1565398-1565559)
chr5 (85-207)||(43574610-43574732)
chr5 (96-239)||(22600426-22600569)
chr5 (85-244)||(39301091-39301249)
chr5 (85-235)||(208936-209086)
chr5 (86-227)||(1850624-1850764)
chr5 (87-244)||(12006339-12006498)
chr5 (90-244)||(22187252-22187408)
chr5 (83-244)||(30006292-30006453)
chr5 (86-228)||(1405170-1405312)
chr5 (83-180)||(16880654-16880751)
chr5 (83-235)||(28516440-28516593)
chr5 (146-241)||(37024626-37024719)
chr5 (86-219)||(42924840-42924977)
chr5 (83-202)||(13801774-13801895)
chr5 (151-244)||(23974748-23974840)
chr5 (103-244)||(2838745-2838886)
chr5 (87-240)||(22861680-22861830)
chr5 (83-196)||(7368413-7368524)
chr5 (83-165)||(34154821-34154903)
chr5 (96-233)||(24323725-24323862)
chr5 (96-233)||(24360349-24360486)
chr5 (88-180)||(7097772-7097863)
chr5 (83-151)||(16957374-16957442)
chr5 (85-180)||(29334426-29334522)
chr5 (120-211)||(41425948-41426039)
chr5 (83-180)||(20135635-20135734)
chr5 (85-235)||(24903705-24903855)
chr5 (85-171)||(3771379-3771465)
chr5 (126-234)||(4809986-4810094)
chr5 (126-226)||(22907915-22908014)
chr5 (137-241)||(31299602-31299705)
chr5 (135-231)||(34074621-34074717)
chr5 (86-169)||(9794388-9794471)
chr5 (157-244)||(10634227-10634313)
chr5 (157-216)||(22025538-22025597)
chr5 (88-234)||(31694120-31694266)
chr5 (83-133)||(39801594-39801644)
chr5 (86-138)||(25622533-25622585)
chr5 (192-244)||(39079882-39079933)
chr5 (85-156)||(13774920-13774991)
chr5 (90-233)||(18426017-18426160)
chr5 (85-154)||(12575669-12575739)
chr5 (183-244)||(17419881-17419942)
chr5 (85-180)||(5873331-5873425)
chr5 (95-149)||(10306493-10306548)
chr5 (85-233)||(24313581-24313732)
chr5 (85-233)||(24355918-24356069)
chr5 (83-133)||(16028631-16028681)
chr5 (85-146)||(10943854-10943914)
chr5 (88-160)||(12477132-12477205)
chr5 (195-236)||(31362454-31362495)
chr5 (83-124)||(32354214-32354255)
chr5 (87-139)||(21784343-21784395)
[»] chr4 (97 HSPs)
chr4 (83-244)||(20224951-20225110)
chr4 (83-244)||(5648226-5648386)
chr4 (83-244)||(6430633-6430793)
chr4 (83-244)||(16408608-16408771)
chr4 (83-244)||(30639347-30639507)
chr4 (83-244)||(11054155-11054314)
chr4 (83-244)||(48598832-48598991)
chr4 (83-241)||(47528537-47528693)
chr4 (83-244)||(23501760-23501917)
chr4 (83-244)||(5306667-5306831)
chr4 (83-244)||(16911529-16911692)
chr4 (83-244)||(21646931-21647094)
chr4 (86-238)||(40915802-40915953)
chr4 (86-236)||(19027823-19027973)
chr4 (83-238)||(44363137-44363294)
chr4 (90-241)||(37494821-37494972)
chr4 (85-235)||(35567146-35567296)
chr4 (96-225)||(25463108-25463237)
chr4 (85-231)||(54175043-54175191)
chr4 (95-231)||(17043413-17043549)
chr4 (83-236)||(47443928-47444085)
chr4 (85-244)||(54966989-54967145)
chr4 (83-219)||(29207905-29208039)
chr4 (87-244)||(54730216-54730376)
chr4 (83-194)||(20639665-20639777)
chr4 (83-233)||(9832320-9832468)
chr4 (92-239)||(14983806-14983953)
chr4 (88-233)||(30690188-30690340)
chr4 (103-228)||(7385503-7385628)
chr4 (83-180)||(25629080-25629177)
chr4 (83-241)||(13256406-13256562)
chr4 (127-244)||(14590804-14590922)
chr4 (83-244)||(8473627-8473788)
chr4 (87-244)||(30352591-30352759)
chr4 (83-230)||(39077803-39077948)
chr4 (113-244)||(47441567-47441697)
chr4 (141-235)||(487200-487294)
chr4 (138-244)||(10660371-10660477)
chr4 (138-244)||(10874516-10874622)
chr4 (86-180)||(51865048-51865142)
chr4 (84-233)||(32478800-32478942)
chr4 (89-235)||(20908649-20908797)
chr4 (137-236)||(25343162-25343261)
chr4 (89-228)||(41018807-41018945)
chr4 (83-199)||(21489099-21489216)
chr4 (96-234)||(3580860-3580994)
chr4 (83-180)||(48327770-48327869)
chr4 (85-199)||(9987843-9987957)
chr4 (90-242)||(20405062-20405210)
chr4 (87-244)||(30496333-30496488)
chr4 (94-235)||(39029078-39029220)
chr4 (85-242)||(55766475-55766632)
chr4 (83-223)||(7038041-7038180)
chr4 (167-244)||(17315389-17315466)
chr4 (151-244)||(42164224-42164315)
chr4 (137-233)||(23580269-23580365)
chr4 (83-193)||(7909287-7909397)
chr4 (92-233)||(30581481-30581624)
chr4 (152-235)||(43035224-43035307)
chr4 (94-232)||(49938611-49938746)
chr4 (85-244)||(36589712-36589870)
chr4 (88-242)||(55830733-55830887)
chr4 (83-166)||(20225119-20225204)
chr4 (88-179)||(12711461-12711553)
chr4 (97-169)||(49796839-49796911)
chr4 (85-169)||(16494259-16494345)
chr4 (116-202)||(17079691-17079777)
chr4 (139-244)||(51420541-51420646)
chr4 (104-236)||(44357195-44357328)
chr4 (83-147)||(38786673-38786737)
chr4 (189-244)||(5313107-5313162)
chr4 (137-236)||(11579819-11579918)
chr4 (92-226)||(32629285-32629418)
chr4 (83-138)||(38755915-38755970)
chr4 (168-235)||(41549358-41549425)
chr4 (83-150)||(33836494-33836563)
chr4 (166-244)||(54640429-54640506)
chr4 (86-167)||(2813169-2813253)
chr4 (83-140)||(11394923-11394980)
chr4 (83-140)||(11404650-11404707)
chr4 (83-130)||(40553944-40553991)
chr4 (88-170)||(12047730-12047811)
chr4 (83-133)||(32484311-32484361)
chr4 (117-235)||(35894502-35894613)
chr4 (83-124)||(35532079-35532120)
chr4 (136-220)||(10380003-10380086)
chr4 (89-177)||(14783746-14783834)
chr4 (83-170)||(36816391-36816479)
chr4 (158-233)||(7227710-7227785)
chr4 (83-138)||(25388249-25388304)
chr4 (86-207)||(10277767-10277886)
chr4 (214-244)||(18969708-18969738)
chr4 (190-244)||(20373908-20373962)
chr4 (190-244)||(50856350-50856403)
chr4 (190-235)||(12257707-12257752)
chr4 (90-139)||(47482864-47482913)
chr4 (85-133)||(19027989-19028037)
[»] scaffold0057 (4 HSPs)
scaffold0057 (83-244)||(46798-46959)
scaffold0057 (90-244)||(24786-24935)
scaffold0057 (89-169)||(43699-43780)
scaffold0057 (188-234)||(46995-47041)
[»] scaffold0311 (1 HSPs)
scaffold0311 (83-241)||(10780-10938)
[»] scaffold0168 (1 HSPs)
scaffold0168 (83-244)||(30546-30705)
[»] scaffold0049 (1 HSPs)
scaffold0049 (83-241)||(58947-59107)
[»] scaffold1176 (1 HSPs)
scaffold1176 (83-242)||(1594-1751)
[»] scaffold0187 (4 HSPs)
scaffold0187 (83-242)||(10057-10214)
scaffold0187 (83-242)||(20385-20542)
scaffold0187 (192-244)||(8912-8964)
scaffold0187 (192-244)||(19240-19292)
[»] scaffold0258 (1 HSPs)
scaffold0258 (83-244)||(13031-13191)
[»] scaffold0223 (1 HSPs)
scaffold0223 (83-244)||(11099-11257)
[»] scaffold0254 (1 HSPs)
scaffold0254 (112-243)||(4125-4259)
[»] scaffold0018 (1 HSPs)
scaffold0018 (83-244)||(72874-73029)
[»] scaffold0005 (2 HSPs)
scaffold0005 (127-244)||(226456-226574)
scaffold0005 (89-177)||(55896-55984)
[»] scaffold0036 (1 HSPs)
scaffold0036 (121-241)||(35062-35184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (83-202)||(48641-48758)
[»] scaffold0954 (1 HSPs)
scaffold0954 (87-180)||(3575-3668)
[»] scaffold0180 (1 HSPs)
scaffold0180 (86-163)||(24143-24220)
[»] scaffold0024 (1 HSPs)
scaffold0024 (182-244)||(83842-83904)
[»] scaffold0167 (1 HSPs)
scaffold0167 (115-220)||(23590-23695)
[»] scaffold0116 (1 HSPs)
scaffold0116 (167-237)||(8865-8935)
[»] scaffold0028 (1 HSPs)
scaffold0028 (122-235)||(32906-33020)
[»] scaffold0031 (1 HSPs)
scaffold0031 (167-243)||(43097-43173)
[»] scaffold0194 (1 HSPs)
scaffold0194 (183-233)||(24642-24692)


Alignment Details
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 30 - 244
Target Start/End: Original strand, 3815031 - 3815245
Alignment:
Q  30 tatagtataaacataaagtacaaaactttagcaaacacatttgttacttatggaacccggtgcactaaagcttccgcatacgtagggtccgggaaagggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3815031 tatagtataaacataaagtacaaaactttagcaaacacatttgttacttatggaacccggtgcactaaagcttccgcatacgtagggttcgggaaagggt 3815130  T
Q  130 cccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac 229  Q
    |||| ||||||||||||||||||||||| |||| | |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  3815131 cccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaac 3815230  T
Q  230 tttaccagttgcgcc 244  Q
    |||||||||||||||    
T  3815231 tttaccagttgcgcc 3815245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 12221921 - 12222085
Alignment:
Q  83 aacccggtgcactaaa-gcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaaga 179  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  12221921 aacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaaga 12222020  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |  |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12222021 ggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12222085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 1347090 - 1346931
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  ||||||||||| |      
T  1347090 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagtggc 1346993  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1346992 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 1346931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 1354764 - 1354923
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  1354764 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 1354861  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1354862 tgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgcc 1354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 29355862 - 29356022
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||| |||||||||||    
T  29355862 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagag 29355961  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaa-ctttaccagttg 240  Q
      |||| |||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  29355962 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttg 29356022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 2166417 - 2166579
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||| |||  ||||||||||||| |||||||| ||||  ||||||||||||||||  |||| ||||| |||||||||||||    
T  2166417 aacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagag 2166516  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
     ||||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  2166517 gttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2166579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 2178050 - 2178212
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||| |||  ||||||||||||| |||||||| ||||  ||||||||||||||||  |||| ||||| |||||||||||||    
T  2178050 aacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagag 2178149  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
     ||||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  2178150 gttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcgc 2178212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 244
Target Start/End: Complemental strand, 20400791 - 20400634
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||| ||| ||||||||||||| ||| ||||||||||   |||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  20400791 cggtgcactaaagtttctgcatacgtagggttcggaaaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtt 20400692  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     |||  ||||||||| ||||| |||||||||||||||||||||| ||||| |||||||    
T  20400691 tccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgcc 20400634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 235
Target Start/End: Complemental strand, 9161252 - 9161099
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||| |||||||||||||||||||||||| |||||||| ||| |||||||| ||||  || |||||||||||||| ||||| |||||||| |||||||||    
T  9161252 aacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgttttt-acacaagag 9161154  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
      |||| |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  9161153 gctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 234
Target Start/End: Original strand, 32728169 - 32728314
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||||||||||| | |||||||||||||||| ||||||||| ||  | ||||||| |||||||| |||||||||||||||||||||| ||||| |||||     
T  32728169 ggtgcactaaagttcccgcatacgtagggtctgggaaagggaccact-atttggtatattgtacacagtcttaccctgttttttacataagaggttgttt 32728267  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    |||  ||||||| | ||||| ||||||||||||||||||||||||||    
T  32728268 ccaaaacttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 244
Target Start/End: Original strand, 13905011 - 13905146
Alignment:
Q  107 atacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtga 206  Q
    ||||| ||||| ||||||||||||| | ||||||||| |||||| |||| |||||||||||||||||||||||| | |||  |||||||||| |||||||    
T  13905011 atacgcagggttcgggaaagggtcc-accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtga 13905109  T
Q  207 catttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    | ||||||||||||||||||||||||||| ||||||||    
T  13905110 cctttcagtcacatgacaacaactttacc-gttgcgcc 13905146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 6024332 - 6024202
Alignment:
Q  114 gggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacattt 211  Q
    |||||||||||  ||||||||||||  |||||||||||||||||||||||| |||||||||||||||||  |||| | |||| ||||| ||||||| ||     
T  6024332 gggtccgggaagaggtcccatcattattggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttc 6024233  T
Q  212 cagtcacatgacaacaactttaccagttgcg 242  Q
    || ||||||||||||||||||||||||||||    
T  6024232 caatcacatgacaacaactttaccagttgcg 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 33138957 - 33138838
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||||| | ||||||  ||||||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||||| |||||    
T  33138957 cggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtt 33138858  T
Q  187 gccaggacttgaacccgtga 206  Q
     |||||||||||||||||||    
T  33138857 tccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 244
Target Start/End: Complemental strand, 8409311 - 8409210
Alignment:
Q  143 gtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    ||||||||||||| ||||||||||||||||||||||||   ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcg 8409212  T
Q  243 cc 244  Q
    ||    
T  8409211 cc 8409210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 244
Target Start/End: Original strand, 7947384 - 7947539
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||||||| || |||||| | |||||||||| ||| |||| ||||| |||||||||||||||| ||||||||| |||||||||| ||| |||||     
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgttt 7947483  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||| ||||||| ||||| ||||||||||   ||| |||||||||| ||||||||    
T  7947484 ccaggagttgaaccggtgacctttcagtcacgcaacaccaactttacc-gttgcgcc 7947539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 15866052 - 15866201
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgc 188  Q
    |||||||| || | ||||| ||| |||||||||||| |||||||| |||||||||||||  ||||||  ||||||||||||||||  |||||  |||| |    
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttc 15866149  T
Q  189 caggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    ||||| |||||||| |||| ||||| ||||||| ||||||||||||||||||    
T  15866150 caggaattgaacccatgacctttcaatcacatgccaacaactttaccagttg 15866201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 241
Target Start/End: Complemental strand, 1941940 - 1941825
Alignment:
Q  126 gggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||||||||| |||||  || ||||| || ||| ||| || |||||| |||||||    
T  1941940 gggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaa 1941841  T
Q  226 caactttaccagttgc 241  Q
    ||||||||||||||||    
T  1941840 caactttaccagttgc 1941825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 24097696 - 24097552
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||||    |||| |||| |||||||||||||||| |||||||  || | | ||    
T  24097696 cactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggt----tgtaagcagccttaccctgttttttatacaagaggctggttcgag 24097601  T
Q  192 gacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    ||||| ||| |||||| ||||||| |||||||| ||| |||||||||||    
T  24097600 gacttaaactcgtgacctttcagtaacatgacatcaattttaccagttg 24097552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 18277200 - 18277343
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||| ||||||| |||||||||||| |||  |||| |||||||| ||||||||||  ||||| ||  ||||||||| ||||||||||||||      
T  18277200 aacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggc 18277299  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaac 226  Q
    |||| ||| || ||||||||||||| ||| ||||||| ||||||    
T  18277300 tgtttccaagatttgaacccgtgaccttttagtcacaggacaac 18277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 26097286 - 26097178
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| ||||||| |||||||||||||||||||||| |||||||||  |||||||||||||      
T  26097286 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 26097189  T
Q  183 tgttgccagga 193  Q
    |||| ||||||    
T  26097188 tgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 28007750 - 28007604
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    ||||||||||| |||||||||||| | ||| |  ||||| |||||||| ||||||||||||||||||||| || ||||||  |||||||||||||  | |    
T  28007750 ccggtgcactagagcttccgcatatggaggtta-gggaaggggtcccagcatttggtgtattgtacgcagcctgaccctg--ttttacacaagaggctct 28007654  T
Q  186 tgccaggacttgaacccgtga-catttca-gtcacatgacaacaacttta 233  Q
    | ||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  28007653 ttccaggacttgaacccgtgaccttttcatgtcacatgacaacaacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 12889553 - 12889402
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||| |||||||||||| || || ||  ||||||||| || |||||||||| ||| ||||||||||| |||| ||| |||||||||| |||||||||  |    
T  12889553 cccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatcgtttaggtgtattgtatgcagccttgccctgtttttaacacaagaggct 12889454  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||  || |||||||||| ||||| ||||| |||| ||||||||||||||||    
T  12889453 gttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 25557851 - 25557743
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||| || |||||||||||||||||||||| |||||||||  |||||||||||||      
T  25557851 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 25557754  T
Q  183 tgttgccagga 193  Q
    |||| ||||||    
T  25557753 tgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 14553585 - 14553482
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||||| ||| ||| |||||||| ||||||||||||||   | || |||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  14553585 tttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt-agtcacatgacaacaactttacca 14553487  T
Q  237 gttgc 241  Q
    |||||    
T  14553486 gttgc 14553482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 14975168 - 14975248
Alignment:
Q  164 tgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||||  |||| |||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  14975168 tgttttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgcc 14975248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 23240837 - 23240971
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgc 188  Q
    ||||||||||||| ||||||||| |  ||||  ||| |||||||| || ||||| |||||||||||  |||||||||  |||||||||||||  |||| |    
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctg--ttttacacaagaggctgtttc 23240934  T
Q  189 caggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    ||||||||| ||| ||||| |||||||||| ||||||    
T  23240935 caggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 19340954 - 19340859
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||| ||||||||||||||||||||||  |||||| |||| ||||||||||| |||||||||||||  |||  ||||||||||||||||||||||||    
T  19340954 cccgttgcactaaagcttccgcatacgccgggtccaggaaggggtcccatcattttggtgtattgt-tgcaaccttaccctgttttttacacaagag 19340859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 23930138 - 23930294
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||||| ||||||| | |||||||| ||| |||||||| ||| ||||||||||||||||    || | ||||||||||||| |||  ||||    
T  23930138 cggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca--actatcttgttttttacacatgagactgtt 23930235  T
Q  187 gccaggactt-gaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     ||| ||||| |||| |||||| ||| || |||||||||||| |||||  |||||||||    
T  23930236 tccatgacttggaactcgtgacctttgagacacatgacaacatctttatgagttgcgcc 23930294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 219
Target Start/End: Complemental strand, 17432476 - 17432332
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttg--gtgtattgtacgcagtcttaccct------gttttttaca 174  Q
    ||||||||||||||||||| |||||| |  ||| ||||||||| |||| || |||||   ||||||||||| ||| ||||||||      ||||||||||    
T  17432476 aacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgttttttaca 17432377  T
Q  175 caagagtttgttgccaggacttgaacccgtgacatttcagtcaca 219  Q
    |||||  ||||| |||||||||||||| ||||| |||||||||||    
T  17432376 caagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 24734753 - 24734600
Alignment:
Q  102 tccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgtt---------ttttacacaagagtttgttgcca 190  Q
    |||||||||| ||| |||||||| |||||||| | |||  | |||||||||||||  |||||||||||         ||||||||||||| ||||| | |    
T  24734753 tccgcatacgcaggatccgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgtttttttttttttttacacaagaggttgtttcaa 24734654  T
Q  191 ggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||| ||||||   |||| ||||||||||||||||||||||||||||||||||||    
T  24734653 ggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgcc 24734600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 8417500 - 8417442
Alignment:
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8417500 tgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 13267853 - 13267788
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattg 148  Q
    ||||||||||||| ||||| ||||||||| ||||||| |||| |||||||| ||||||||||||||    
T  13267853 aacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 32579543 - 32579436
Alignment:
Q  93 actaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccagg 192  Q
    ||||||||| ||||||| | |||||| ||||| |||||||| ||||||| ||||||||||||| |||||| |  |||||| || ||||  |||| |||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgt-atttttataccagaggctgtttccagg 32579445  T
Q  193 acttgaacc 201  Q
    |||||||||    
T  32579444 acttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 33922942 - 33922996
Alignment:
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||    
T  33922942 aggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgcc 33922996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 3116139 - 3116298
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||| ||||||||| ||||||||| | |||||| ||| |||||||| |||||  |||||||||| |||||||         |||||| ||||||| ||    
T  3116139 ccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtc--------atttttatacaagaggtt 3116230  T
Q  184 gttgccaggacttgaacccgtgacatttcag-------tcacatgacaacaactttaccagttgcgcc 244  Q
    ||| ||| ||||||||||| |||| ||||||       ||||||||||||||||||||| ||||||||    
T  3116231 gtttccatgacttgaacccatgacctttcagtcgcaactcacatgacaacaactttaccggttgcgcc 3116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 27855500 - 27855601
Alignment:
Q  139 tggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccag 237  Q
    ||||||||| ||||||| |||||||| |||||| ||||| ||   ||||  | |||||| ||| || ||||||||||||||||||||| |||||||||||    
T  27855500 tggtgtattatacgcagccttaccctatttttttacacaggaagctgttttcgggacttaaactcgcgacatttcagtcacatgacaaaaactttaccag 27855599  T
Q  238 tt 239  Q
    ||    
T  27855600 tt 27855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 4136598 - 4136670
Alignment:
Q  157 cttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac 229  Q
    |||||||||| ||||||||||||  |||||   |||||||||||||||||||||| |||||| || |||||||    
T  4136598 cttaccctgtattttacacaagatgttgtttttaggacttgaacccgtgacattttagtcacgtggcaacaac 4136670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 6808523 - 6808468
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt 138  Q
    ||||||||||||||||||| ||||||||  |||||||||||| |||||||| ||||    
T  6808523 aacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 11849159 - 11849031
Alignment:
Q  106 catacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgt 204  Q
    |||||| || || |||||| |||||||| ||||| ||||||||||  |||   ||| ||||||||| ||||||||| ||||| || |||||||||||       
T  11849159 catacgcagagttcgggaaggggtcccaccattttggtgtattgtgggcaactttatcctgtttttaacacaagaggttgtttcctggacttgaacc--a 11849062  T
Q  205 gacatttcagtcacatgacaacaactttacc 235  Q
     ||||||||||||| |||||| |||||||||    
T  11849061 aacatttcagtcacgtgacaataactttacc 11849031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 12063488 - 12063437
Alignment:
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||||||||||||||||| |||||||| ||||| |||||||||| |||||||    
T  12063488 aggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgc 12063437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 12886041 - 12885967
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgcag 155  Q
    ||||||||||||||||||| || |||||| |||||| ||||| |||||||| ||  ||| |||||||||||||||    
T  12886041 aacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 383767 - 383837
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgc 153  Q
    ||||||||| ||| ||||| ||||||||| |||||| | ||| ||||||||  ||||||||||||||||||    
T  383767 aacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 2755485 - 2755583
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||||||||||||||| |||| ||| |||||   | |||||  ||||  || ||||||||||   ||| |||||||||||||||||||||||||||    
T  2755485 tttggtgtattgtacgcagccttagcctatttttggtataagaggatgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 12892137 - 12892064
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcat--ttggtgtattgtacgca 154  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| |||||||| |||  |||||||||| ||||||    
T  12892137 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 32068167 - 32068074
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||||||||||||||  |||  ||| |||||||||||||||||||   ||| ||| |||||||||  ||||| |||| ||||| ||||||||||||||    
T  32068167 tttggtgtattgtaaacagcattatcctgttttttacacaagag---gtttccaagacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 17448389 - 17448316
Alignment:
Q  146 ttgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcaca 219  Q
    |||||||||| ||||||||||||||||||||| |  |||||  ||  ||||||||||||||| ||||| |||||    
T  17448389 ttgtacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttcaatcaca 17448316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 24751139 - 24751176
Alignment:
Q  141 gtgtattgtacgcagtcttaccctgttttttacacaag 178  Q
    |||||||||||||||||||||||| |||||||||||||    
T  24751139 gtgtattgtacgcagtcttaccctattttttacacaag 24751176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 22967215 - 22967139
Alignment:
Q  167 tttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    |||||||||||||  ||||| ||| |||||||||  ||||| || |||||||||||||| ||||||| ||| |||||    
T  22967215 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgc 22967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 23821178 - 23821254
Alignment:
Q  167 tttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    |||||||||||||  ||||| ||| |||||||||  ||||| || |||||||||||||| ||||||| ||| |||||    
T  23821178 tttttacacaagaagttgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgc 23821254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 19649300 - 19649335
Alignment:
Q  209 tttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||||||||| ||||||||||    
T  19649300 tttcagtcacatgacaacaactttatcagttgcgcc 19649335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 15865885 - 15865992
Alignment:
Q  104 cgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg-ttttttacacaagagtttgttgccaggacttgaaccc 202  Q
    |||| ||| ||||||| |||| |||||||| ||||||||||||  |||||||  |||||||| ||||||||  |||||  |||| |||||| ||||||||    
T  15865885 cgcaaacgcagggtccaggaaggggtcccaccatttggtgtat--tacgcagctttaccctgtttttttacgtaagaggctgtttccaggaattgaaccc 15865982  T
Q  203 gtgacatttc 212  Q
     |||| ||||    
T  15865983 atgacctttc 15865992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 16895704 - 16895745
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaa 124  Q
    |||||||||||||||| ||||| |||| ||||||||||||||    
T  16895704 aacccggtgcactaaaacttccacatatgtagggtccgggaa 16895745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 10734914 - 10734962
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||| ||||||||| ||||||||| |||||||||||| ||| ||||    
T  10734914 cccggtggactaaagctcccgcatacgcagggtccgggaagggggccca 10734962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 14341134 - 14341166
Alignment:
Q  140 ggtgtattgtacgcagtcttaccctgtttttta 172  Q
    |||||||||||||||| ||||||||||||||||    
T  14341134 ggtgtattgtacgcagccttaccctgtttttta 14341166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 40272819 - 40272980
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |    
T  40272819 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggt 40272918  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||    
T  40272919 tgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgcc 40272980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 46421044 - 46421205
Alignment:
Q  86 ccggtgcact-aaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||      
T  46421044 ccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggc 46421143  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  46421144 tgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgcc 46421205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 13628797 - 13628957
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||| |||||||||||    
T  13628797 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagag 13628896  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac-tttaccagttg 240  Q
      |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  13628897 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttg 13628957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 13730609 - 13730772
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| |||||||| ||||  ||||||||||||| ||| ||||||||||||||||||||||||    
T  13730609 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagag 13730708  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  13730709 gctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 13730772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 8247693 - 8247857
Alignment:
Q  83 aacccggtgcact-aaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaaga 179  Q
    ||||| ||||||| |||||| ||||||||| |||||||||||| | |||||| ||||  ||||||||||||||||  |||||||||||||||||||||||    
T  8247693 aacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaaga 8247792  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |  |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8247793 ggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 8247857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 26869856 - 26869696
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||| |||||| ||||||||| | ||||||| || |||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||      
T  26869856 aacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaccagaggc 26869758  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  26869757 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 29366727 - 29366890
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||| ||||||||||||| || |||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||| |||||||    
T  29366727 aacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagag 29366826  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  29366827 gctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgcc 29366890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 1217238 - 1217079
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||  ||||||||||||||||||||| |||||||||  |||||||||||||      
T  1217238 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 1217141  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  1217140 tgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgcc 1217079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 26573272 - 26573117
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||||||||  |||||||| |||||||||||  |||||||| || |||||||||||||||||| |||||||||||||||||||| |||  ||||     
T  26573272 ggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgttt 26573173  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  26573172 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 26573117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 22122924 - 22123083
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| ||||  |||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  22122924 aacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagagac 22123021  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||    
T  22123022 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgcc 22123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 16735590 - 16735430
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| ||||||| ||||| ||||||||| || ||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||  |||||||      
T  16735590 aacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttctacaagaggc 16735492  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  16735491 tgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgcc 16735430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 22609915 - 22609756
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||| ||||| ||||||||| | |||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||      
T  22609915 aacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggc 22609817  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||| ||||||||||||| || || |||||||||||||||||||||||| ||||||||    
T  22609816 tgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgcc 22609756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 6411833 - 6411987
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||||| ||||||||| | |||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtt 6411931  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
      || ||||||||||| |||| | ||||| ||||||||||||||||||||||||||    
T  6411932 tacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcg 6411987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 34420656 - 34420802
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||||||| || |||||| | |||||||||| |||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||  ||||     
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  34420756 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 39203664 - 39203509
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||| | | |||||||||| |||||||| ||||||||||||||||||||  |||||||||  |||||||||||||      
T  39203664 aacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacacaagaggc 39203567  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    |||| | |||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  39203566 tgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttg 39203509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 12914042 - 12914203
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||| | ||||| ||||||| | |||||| ||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||||||      
T  12914042 aacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggc 12914141  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||  ||||| |||| ||||||| |||||||||||||||||||||||    
T  12914142 tgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgcc 12914203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 52926226 - 52926378
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||| |||||||| ||||||||| |||||||||||| | |||||| ||||||||||||||||||||| |||||         ||||||||||      
T  52926226 aacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac---------tacacaagaggc 52926316  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  52926317 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 52926378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 516562 - 516417
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt---ggtgtattgtacgcagtcttaccctgttttttacacaaga 179  Q
    ||||||||||||||||||| ||||||||| |||||| ||||| |||||||  |||||   ||| |||||| ||||| |||||||||||||||||||||||    
T  516562 aacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacacaaga 516463  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    |  |||| |||||||||||||||||||| |||||||||||||||||    
T  516462 ggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 45948848 - 45949008
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||||||||| ||||||||| |||||||| ||| |||||||| || ||||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  186 tgccaggacttgaacccgtgacat---ttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    | |||||| ||||||||||||| |   ||||||||||||| |||||||| ||| ||||||||    
T  45948948 ttccaggaattgaacccgtgaccttccttcagtcacatgaaaacaacttcacc-gttgcgcc 45949008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 53996574 - 53996725
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    ||||||||||||||||| || |||||| || ||| ||||| |||||||| ||||| ||||||||||| |||| |||||||||||||||||||||||| ||    
T  53996574 cccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggtt 53996673  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||| ||| ||||||||| |||||| ||||||||| |||||||||| ||||||    
T  53996674 gtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 4495713 - 4495831
Alignment:
Q  125 agggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgaca 224  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||  | ||  ||||||||||||||||||| || |||||||||||||    
T  4495713 agggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgaca 4495812  T
Q  225 acaactttaccagttgcgc 243  Q
    |||||||||||||||||||    
T  4495813 acaactttaccagttgcgc 4495831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 7943140 - 7942993
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| ||||||||||||| ||||||||| | |||| || || || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||       
T  7943140 aacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgc 7943041  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaact 230  Q
    |||| |||||||||||| ||||||| || |||||||||||||||||||    
T  7943040 tgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 7696946 - 7697053
Alignment:
Q  135 catttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||  |||| |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  7696946 catttggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttac 7697043  T
Q  235 cagttgcgcc 244  Q
    ||||||||||    
T  7697044 cagttgcgcc 7697053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 244
Target Start/End: Complemental strand, 9607345 - 9607192
Alignment:
Q  93 actaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcca 190  Q
    ||||||||| ||||||| |  ||||| ||||| |||||||| ||||  ||||||||| ||||||| ||||||||||||||||| ||||||  |||| |||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  191 ggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||  |||| |||||||||||||||||||||||||| |||||||||    
T  9607245 ggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgcc 9607192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 5173726 - 5173889
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| | |||||||||| ||| |||| |||||  ||||||||| | |||  |||||  |||||| ||||||||||    
T  5173726 aacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtttt-tacacaagag 5173824  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac-tttaccagttgcgcc 244  Q
     ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  5173825 gttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgcc 5173889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 14987109 - 14986989
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| | | |||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  14987109 aacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 14987010  T
Q  181 tttgttgccaggacttgaacc 201  Q
      |||| ||||||||||||||    
T  14987009 gctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 10870025 - 10870119
Alignment:
Q  149 tacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||| ||||||||||||| ||||||||||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10870025 tacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 10870119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 54374357 - 54374488
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    |||| ||||||||| ||||||| | |||||||||||| |||||||| ||||| |||| ||||||||||| |||||||| ||||||||||||||| |||||    
T  54374357 ggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtt 54374456  T
Q  187 gccaggacttgaacccgtgacatttcagtcac 218  Q
     ||| |||||||||| ||||| ||||||||||    
T  54374457 tccaagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 54484841 - 54484730
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg-ttttttacacaagagt 181  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||| || |||||||||||||||     
T  54484841 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaagagg 54484742  T
Q  182 ttgttgccagga 193  Q
     |||| ||||||    
T  54484741 ctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 31592997 - 31592878
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| | |||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  31592997 aacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 31592900  T
Q  183 tgttgccaggacttgaacccgt 204  Q
    |||| |||||||||||||||||    
T  31592899 tgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 10795430 - 10795554
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||| |||||||| ||||| ||||||||| ||||||| |||| |||||||| |||||  |||||||||||||||| |||||||||| |||||||||||||    
T  10795430 aacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagag 10795529  T
Q  181 tttgttgccaggacttgaacccgtg 205  Q
      |||| ||||||||||||||||||    
T  10795530 gctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 54032608 - 54032705
Alignment:
Q  125 agggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatga 222  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||    
T  54032608 agggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatga 54032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 28905084 - 28904941
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagagtttgttgcca 190  Q
    |||||||| | |||| |||| |||||||||||||||||||||| |||||||||| ||||| |||||||||| |||| |||||||||||||  |||| ||     
T  28905084 cactaaagttcccgcttacgcagggtccgggaaagggtcccat-atttggtgtaatgtacacagtcttaccttgttattttacacaagagactgttccct 28904986  T
Q  191 ggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||| |||  ||||| ||| |||||||||||||||||||||||    
T  28904985 ggacttaaacatgtgactttttagtcacatgacaacaactttacc 28904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 45620881 - 45620996
Alignment:
Q  129 tcccatcatttggtgtattgtacgcagtcttaccctgtttt-ttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaaca 227  Q
    ||||| || |||||||||||||||||| ||||||||||||| |||||||||||  |||| |||| ||||||||||||||| |||||||||| ||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T
Q  228 actttaccagttgcgcc 244  Q
    |||||||| ||||||||    
T  45620981 actttacc-gttgcgcc 45620996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 25944615 - 25944468
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||| |||||||| || |||||| |||||| ||||| |||||||| ||||| |||||||||||| ||| ||| ||| ||||||||||| ||||   |||    
T  25944615 ggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtt 25944516  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
     ||||||||||||||| |||| |||||||||| |||||||||||||||    
T  25944515 tccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 30928167 - 30928302
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| || |||| | |||||||||||| |||||||  || |||||||||| ||| ||  |||||| |||||||||||||||||  |||| ||||||||    
T  30928167 aaagctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggact 30928266  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaactt 231  Q
    |||||||||||| ||||||||||||||||| |||||    
T  30928267 tgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 44403564 - 44403715
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggt-gtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||| | ||||| |||||| ||| |||||||||||||  |    
T  44403564 cccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggct 44403663  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
     || ||||||||| |||| ||||| ||| || ||| |||||| |||||||||    
T  44403664 attcccaggactttaacctgtgaccttttagccacgtgacaataactttacc 44403715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 19731150 - 19731000
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||||| | ||||||  || ||| |||||||||||||| || | |||||||||||||||  |||||| |||||||||||||||||  |     
T  19731150 cccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggcta 19731051  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    || |||||||||| | ||||||| ||||| |||| ||||||||| ||||||    
T  19731050 tttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 39212094 - 39211992
Alignment:
Q  129 tcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaa 228  Q
    |||| |||| || ||||||||||||||||||||| |||| |||||||||||| || || ||||||||||||||||||||||||||||||||| || ||||    
T  39212094 tcccgtcatctgatgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataacgacaa 39211995  T
Q  229 ctt 231  Q
    |||    
T  39211994 ctt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 25517177 - 25517341
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg-ttttttacacaagagt 181  Q
    ||||||||||||||||||| | ||||||| ||| |||||||| |||||||| ||||| ||||||||||||||| | || | || |||||||||||||||     
T  25517177 aacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacacaagagg 25517276  T
Q  182 ttgttgccagg--acttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     |||| |||||   | | | || ||||| || |||||||||||||||||||||||||||||||||    
T  25517277 atgtttccaggtcccatcatcctgtgaccttccagtcacatgacaacaactttaccagttgcgcc 25517341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 33235681 - 33235526
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagagt 181  Q
    |||| |||||||||||||||||||||||||| |||| | ||  |||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||     
T  33235681 aacctggtgcactaaagcttccgcatacgtaaggtctgcgag-gggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaagagg 33235583  T
Q  182 ttgttgccaggacttgaacccgtgacatttca-gtcacatgacaacaactttaccag 237  Q
     | ||  || || ||||||  ||||| ||||| ||||||||||||||||||||||||    
T  33235582 ctctttacacgatttgaacttgtgacctttcatgtcacatgacaacaactttaccag 33235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 45786221 - 45786320
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| | |||| || |||||||||||| |||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||    
T  45786221 aacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagag 45786320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 9276393 - 9276317
Alignment:
Q  103 ccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9276393 ccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaagag 9276317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 34771373 - 34771457
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    |||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  34771373 cccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 45139487 - 45139624
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||| |||| | ||||||||| ||| || ||||| |||||||| |||||  ||||||||||| |||| |||||||||| ||||||||||||| |    
T  45139487 cccggtgcac-aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggt 45139584  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatga 222  Q
    |||| |||  ||||||||||||||| ||||||||||||||    
T  45139585 tgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 49013480 - 49013579
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| |||| || |  ||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  49013480 aacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 49013579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 353356 - 353450
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacac 175  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||    
T  353356 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 33926224 - 33926094
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt-tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcca 190  Q
    ||||||||||  |||||| | ||||||| |||| |||||||| |||| ||||||||||||| ||| |||||||||||||| |||||||||  | || |||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgttttt-acacaagaggctatttcca 33926126  T
Q  191 ggacttgaacccgtgacatttcagtcacatga 222  Q
    |||||||||||| |||| ||||||||||||||    
T  33926125 ggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 15797370 - 15797284
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    |||||||||||||| |||| || |||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  15797370 aacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 55401325 - 55401208
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||||||  |||||| ||||||||| | |||||| ||| |||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||  |    
T  55401325 cccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggct 55401226  T
Q  184 gttgccaggacttgaacc 201  Q
    |||  |||||||||||||    
T  55401225 gtttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 26782466 - 26782357
Alignment:
Q  133 atcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttt 232  Q
    ||||||||||||||| ||  |||  ||||||| ||||||||||||||| ||||| | |||||||||| ||||||| ||||| || |||||||| ||||||    
T  26782466 atcatttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataacttt 26782367  T
Q  233 accagttgcg 242  Q
    |||| |||||    
T  26782366 accaattgcg 26782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 53062112 - 53062036
Alignment:
Q  159 taccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||||||||| ||||| |||  |||| ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 829452 - 829609
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||||||||| | ||||||| ||||| |||||| |||||||| || ||||||||||||||||||   ||||  |||| |||| ||||||| |||    
T  829452 ccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttagacaagaggttg 829551  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || | || |||||||| || | | ||||| |||| |||||||||||||||| ||||||||    
T  829552 tttctagaacttgaactcgggtc-tttcaatcacgtgacaacaactttacc-gttgcgcc 829609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 31904868 - 31904955
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaaggg-tcccatcatttggtgtattgtacgcagtcttaccctgttttttaca 174  Q
    |||||||||||||| ||||| ||||| | || ||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  31904868 ggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttaca 31904955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 47624161 - 47624095
Alignment:
Q  113 agggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  47624161 agggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagag 47624095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 19751726 - 19751576
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||||||||||   ||||||  |  ||| |||||||||||||| || | |||||||||||||||  |||||| || ||||||||||||||  |     
T  19751726 cccggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggcta 19751627  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    || |||||||||| | ||||||| ||||| |||| |||||| || ||||||    
T  19751626 tttccaggacttgcatccgtgacctttcaatcacgtgacaaaaaatttacc 19751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 21875116 - 21875011
Alignment:
Q  131 ccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac 229  Q
    |||| |||| ||||||||||||||| |||||||| |||||| ||||||||| ||||| |||| | |||||||||       |||||||||||||||||||    
T  21875116 ccattatttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccg-------tcagtcacatgacaacaac 21875024  T
Q  230 tttaccagttgcg 242  Q
    |||||||||||||    
T  21875023 tttaccagttgcg 21875011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 26292480 - 26292394
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    |||||||||||||| || | ||||||| | ||||| |||||| || |||||||||||||||||| |||||| |||||||||||||||    
T  26292480 aacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgtttt 26292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 12525489 - 12525399
Alignment:
Q  151 cgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| ||||||||| ||||||||||||||  |||| |||||||| ||||| ||||| ||||||||| |||   ||||||||||||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgcc 12525399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 35417988 - 35417906
Alignment:
Q  161 ccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||||  |||| |||||| |||||| |||||| | |||||||||||| |||||||||||| ||||||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgcc 35417906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 52428479 - 52428616
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtc-------ccatcatttggtgtattgtacgcagtcttaccctgttttttacacaa 177  Q
    ||||||||||||||||| || ||||||||||||||| ||| ||||        |||  |||||||||||||||||||| |||||||||| ||||||||||    
T  52428479 cccggtgcactaaagctcccacatacgtagggtccgagaaggggtttggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaa 52428578  T
Q  178 gagtttgttgccag-gacttgaacccgtgacatttcag 214  Q
    |||  || | |||| ||||| |||||||||| ||||||    
T  52428579 gaggctgcttccagagacttaaacccgtgacctttcag 52428616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 43114882 - 43114994
Alignment:
Q  90 tgcactaaagcttccgcatacgtaggg-tccgggaaagggtcccatcatttggtgtattgtacgcag-tcttaccctg-ttttttacacaagagtttgtt 186  Q
    |||||||||||| ||||||||| |||| ||| |||| |||||||| |||||||||||||||| | ||  ||||||||| |||||||||||||||  ||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaa-gggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtt 43114980  T
Q  187 gccaggacttgaac 200  Q
     |||||||||||||    
T  43114981 tccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 1121286 - 1121382
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    |||||||||||||||||||||| ||| | ||| ||||||||||  ||||| ||||||||| ||| |||||| |||||| |||  |||||||| ||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctttcagccaccggacaacaaattta 1121382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 8410887 - 8411016
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    ||||||||||| || | |||||| | |||  ||||||| || ||||||||||||  |||| |||||||||||||||||||  |||   ||| |||||||     
T  8410887 aaagcttccgcctatgcagggtctgagaagaggtcccaccagttggtgtattgtgagcagccttaccctgttttttacac--gaggcagtttccaggacc 8410984  T
Q  196 tgaacccgtgacatttcagtcacatgacaaca 227  Q
    |||||| ||||| |||||||| ||||||||||    
T  8410985 tgaaccggtgacctttcagtcccatgacaaca 8411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 24578075 - 24578007
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtac 151  Q
    |||||||||||||| || | ||||||| |||||||| ||||||| |||||| ||||| |||||||||||    
T  24578075 aacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 29106646 - 29106539
Alignment:
Q  136 atttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||||||||||||| |  |||| ||| ||||||||||||||| |||||  || |||||| ||||||||  ||| || ||||||||||||  ||||||    
T  29106646 atttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtgatctttgagccacatgacaacatttttacc 29106547  T
Q  236 agttgcgcc 244  Q
     ||||||||    
T  29106546 -gttgcgcc 29106539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 24851308 - 24851367
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggt 142  Q
    ||||||||||||||||||| ||||||| | ||| |||||||| |||||||| ||||||||    
T  24851308 aacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttggt 24851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 31672839 - 31672752
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaa-agggtcccatcatttggtgtattgtacgcagtcttaccctgttttttaca 174  Q
    |||||||||||||| ||||| ||||| | |  ||||| || |||||| |||||||||||||||||||| |||| || |||||||||||    
T  31672839 ggtgcactaaagctcccgcacacgtaagatatgggaagagagtcccaccatttggtgtattgtacgcactcttgccttgttttttaca 31672752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 47624249 - 47624207
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaa 125  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  47624249 aacccggtgcactaaagctcccgcatacgcagggtccgggaaa 47624207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 4537179 - 4537096
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgcagtcttaccctgtttttt 171  Q
    |||| |||||||||||||||||||||||  ||||| | |||| ||||  |||| |||||| ||||||||||||||  |||||||    
T  4537179 tgcattaaagcttccgcatacgtagggtttgggaaggagtcctatcatttttgatgtattatacgcagtcttacctagtttttt 4537096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 10484623 - 10484671
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcc 131  Q
    ||||||||||||||||||| ||||||||| ||||||| |||| ||||||    
T  10484623 aacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 50624962 - 50625057
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||| || | |||| |||| || |||| | |||||| ||  |||||||||||||||   |||||||| |||| ||||||||||    
T  50624962 cccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgctaccttacccttttttatacacaagag 50625057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 10300629 - 10300583
Alignment:
Q  95 taaagcttccgcatacgtagggtccgggaaagggtcccatcatttgg 141  Q
    ||||||| |||||||||||||||| ||||| | ||||||||||||||    
T  10300629 taaagctcccgcatacgtagggtctgggaaggagtcccatcatttgg 10300583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 30452945 - 30452895
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    |||||||||||||| |||| ||||||| | |||||||||||| ||||||||    
T  30452945 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccca 30452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 32418311 - 32418221
Alignment:
Q  144 tattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||||||| ||||||||| |||| ||||||   ||||| ||||| | | ||||| |||   ||||||||||||||| |||||||||||||||    
T  32418311 tattgtatgcagtcttatcctgatttttatgtaagaggttgtttctatgacttaaactaatgacatttcagtcacttgacaacaactttac 32418221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 24577982 - 24577917
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtac 151  Q
    ||||||||||| |||| ||| ||| | |||||| |||||||| ||||| ||||| |||||||||||    
T  24577982 ccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 46247960 - 46248117
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||| |||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  46247960 aacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggc 46248059  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46248060 tgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 46248117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 46991955 - 46991797
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| || |||||| |||||||||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||||||||| |    
T  46991955 aacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggt 46991856  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  46991855 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 46991797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 34725105 - 34725264
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||  |||||||||      
T  34725105 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgtttt--acacaagaggc 34725202  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34725203 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 34725264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 18944797 - 18944633
Alignment:
Q  83 aacccggtgcactaaa-gcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaaga 179  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  18944797 aacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaaga 18944698  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |  |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  18944697 ggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 18944633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 14617189 - 14617028
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||| | |||||||||||| || ||||| ||||||||||||||||||||  |||||| |||| ||||||||||||      
T  14617189 aacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggc 14617090  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  14617089 tgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgcc 14617028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 41319813 - 41319970
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| ||||||| || || ||||||| | ||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  41319813 aacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagac 41319912  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  41319913 tgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccagttg 41319970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 96 - 244
Target Start/End: Original strand, 18724565 - 18724712
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| ||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||  |||| ||||||||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggact 18724664  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  18724665 tgaacccgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 18724712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 23768334 - 23768486
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcc 189  Q
    |||||||||||| ||||||||| |||||| ||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||| ||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcc 23768433  T
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    | |||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  23768434 atgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcg 23768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 30395737 - 30395896
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||| ||||||| |  ||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||  ||    
T  30395737 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctg 30395836  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  30395837 tttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgcc 30395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 32632564 - 32632724
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| |||||||| ||||| ||||||| | |||||  ||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||      
T  32632564 aacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggc 32632662  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  32632663 tgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgcc 32632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 6925247 - 6925096
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||||| ||||||||| |||| ||||||| |||||||| |||| |||||||||| ||||| |||||||| |||||||||||||||  | ||    
T  6925247 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatt 6925148  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagt 238  Q
     |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  6925147 tccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 10668378 - 10668210
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||| ||||||| |||||||| ||||  ||||||||||||||||  |||||| |||||||||||||||||    
T  10668378 aacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagag 10668279  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtc-----acatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| ||||||||     ||||||||||||||||||||||||||||    
T  10668278 gctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgcc 10668210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 241
Target Start/End: Original strand, 20004097 - 20004257
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||| ||||| |||||||| ||||  ||||||||||||||||| |||||| |||||||||||| ||||    
T  20004097 aacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagag 20004196  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
      |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  20004197 gctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 20004257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 47214655 - 47214501
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||| |||| ||||||| | |||||| ||||| |||||||| ||||||||||||||||||||  |||||||||||||  | |||||||  ||||     
T  47214655 ggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt--aaacaagagactgttt 47214558  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47214557 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 47214501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 86 - 240
Target Start/End: Complemental strand, 27474428 - 27474275
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||| ||||  |||||||||||||||  || |||||||||| |||||||||  |||    
T  27474428 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgttttt-acacaagagactgt 27474330  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    | ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  27474329 ttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 27474275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 38478289 - 38478448
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||| ||| |||| ||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  38478289 aacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 38478386  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| | |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  38478387 tgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgcc 38478448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 90 - 236
Target Start/End: Complemental strand, 27201793 - 27201645
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||||||||||| ||||||||| | |||||||||| |||||||| |||||  |||||||||||||||| |||||||||||| | |||||||||  ||||     
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgttt 27201694  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  27201693 ccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 96 - 244
Target Start/End: Complemental strand, 11596650 - 11596504
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| ||||||||| ||||||| |||| |||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| ||||| | ||||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt-acacaagaggttgtttctaggact 11596552  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  11596551 tgaacccgtgacatttcagtcacatgacagccactttacc-gttgcgcc 11596504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 20036350 - 20036218
Alignment:
Q  105 gcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttt-tttacacaagagtttgttgccaggacttgaacccg 203  Q
    ||||||| |||||||||||| |||| ||| |||||||||||||| ||||| ||||||||| | | |||||||||||||||||| ||||||||||||||||    
T  20036350 gcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccg 20036251  T
Q  204 tgacatttcagtcacatgacaacaactttacca 236  Q
    |||| ||||||||||||||||||||||||||||    
T  20036250 tgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 35117774 - 35117927
Alignment:
Q  85 cccggtgcactaaagcttccgcat-acgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    ||||||||||||||||| | |||| ||| |||||||||||| ||||||||||||||  |||||||||||| ||| |||||||||| |||||||||||||     
T  35117774 cccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagagg 35117873  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
     | || |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  35117874 ctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 44485119 - 44485267
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||| |||||| ||||||||||||| |||||||| |||||| | ||||||||||||||||||||| |||||| ||| ||||||||||| | |||    
T  44485119 cccggtgcac-aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttg 44485217  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    || ||||||||  |||||||||| ||||| ||||||||||||||||||||    
T  44485218 tttccaggactataacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 45402247 - 45402085
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcag-tctt--accctgttttttacacaaga 179  Q
    ||||||||||||||||||| ||||||||| |||||| ||||| |||||||| |||||||||||||||||||||  |||  |||||| |||||||||||||    
T  45402247 aacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctg-tttttacacaaga 45402149  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |  |||| ||||||||||||||||| || || || ||||||||||||||||||||||||||||||    
T  45402148 ggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgcc 45402085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 2435796 - 2435954
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||||||||| |||||| || ||||| ||| || |||||||| ||||| |||||||||||||||| |||||||| ||||| ||||| |||  ||    
T  2435796 ccggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctg 2435895  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || |||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  2435896 tttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 2435954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 8197194 - 8197036
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||| |||||||||| |  |||||| |||||||| ||| |||||| | ||||||||||| |||||| || |||||| |||||||||||||||||      
T  8197194 aacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacacaagaggc 8197095  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
      || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  8197094 aattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgc 8197036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 45812544 - 45812703
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||  ||||| |||||||| |||||||||||||||| |||| |||||||| ||||  |||||||||      
T  45812544 aacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctctttt--acacaagagac 45812641  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||  ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  45812642 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgcc 45812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 98 - 234
Target Start/End: Original strand, 25468285 - 25468421
Alignment:
Q  98 agcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttg 197  Q
    |||| ||||||||| |||||| |||||  ||||| | ||||||||||||||||||||  ||||||||| |||||||||||||| ||||| ||||||||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  198 aacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||||| |||| ||||| ||||||||||||||||||||    
T  25468385 aacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 19932782 - 19932920
Alignment:
Q  105 gcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaaccc 202  Q
    ||||||| |||||||||||| |||||||| |||||  |||||||||||||||| ||||||||||||||||||||| || ||||  |||  ||||||||||    
T  19932782 gcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa-aggttgtatcca--acttgaaccc 19932878  T
Q  203 gtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     |||| ||||||||||||||||||||||||||||||||||||    
T  19932879 atgacctttcagtcacatgacaacaactttaccagttgcgcc 19932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 9939615 - 9939450
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaaggg-tcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaaga 179  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| ||| ||||| |||||  ||||||||| |||||  |||||| ||||| ||| ||||||    
T  9939615 aacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaaga 9939516  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac-tttaccagttgcgcc 244  Q
    | ||||| ||||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||    
T  9939515 ggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgcc 9939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 18741964 - 18742129
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgtttttt-acacaaga 179  Q
    |||||||||||||||||||  |||||||| |||||| ||||| |||||||| |||||  |||||||||||||||| ||||||||||||||| | |||| |    
T  18741964 aacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttatacaaaa 18742063  T
Q  180 gtttgttgcc-aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |  |||| || | || |||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  18742064 gactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgcc 18742129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 19414588 - 19414437
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | ||||| |||||| |||||||| ||||||||||||||||||||| |||| ||||  ||||||| |||||      
T  19414588 aacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctg--ttttacataagaggc 19414491  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    | || | |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  19414490 tctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacca 19414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 35005276 - 35005139
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||  ||||||||| |||||||||||| |||||||| |||||  ||||||||||| |||| ||||||||||||||||||||||||    
T  35005276 aacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagag 35005177  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcac 218  Q
      ||||  || |||||||||||||||| ||||||||||    
T  35005176 gctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 6983820 - 6983969
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||| |||||| | || |||| ||||||||| || |||||||| ||||||||||||||||||||  |||||||||||||||| ||  |||  ||    
T  6983820 cccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac--gaggctg 6983917  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    || |||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  6983918 tttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 244
Target Start/End: Original strand, 12126850 - 12127003
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgc 188  Q
    |||||||| |||| ||||||| | |||||||||||| ||||||||  |||||||||||||||||||| |||||||||  ||||||||||||   |||| |    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctg--ttttacacaagaagctgtttc 12126947  T
Q  189 caggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||| |||| |||||||||| ||||| | |||||||||||||||||| |||||||||    
T  12126948 cagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgcc 12127003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 19701717 - 19701570
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    |||||||||||||| ||||||||| |||||||||||| ||| |||| ||||| |||||||||||| ||  ||||||  ||||||||||||||||  ||||    
T  19701717 ggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgtt 19701618  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
      || ||||| |||||||||||||||||||||| ||||||||||||||    
T  19701617 ttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 35253197 - 35253329
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    ||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||  |||    
T  35253197 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgt 35253294  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacat 220  Q
    | | |||||||||||||||||  ||||||||||||    
T  35253295 ttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 4349789 - 4349699
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttac 173  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  4349789 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 4430080 - 4430194
Alignment:
Q  130 cccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac 229  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||  || ||||| |||||||||| || ||||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaac 4430179  T
Q  230 tttaccagttgcgcc 244  Q
    |||||||| ||||||    
T  4430180 tttaccagctgcgcc 4430194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 22930106 - 22930235
Alignment:
Q  113 agggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttc 212  Q
    ||||||| |||| |||||||| ||||||||||||||| | ||  ||||||||||||| ||||||| ||  |||| ||||||||||||||| |||| ||||    
T  22930106 agggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttt-tacacaaaaggctgtttccaggacttgaacccatgacctttc 22930203  T
Q  213 agtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||||||||||||||||    
T  22930204 agtcacatgacaacaactttaccagttgcgcc 22930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 22327196 - 22327101
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttt 232  Q
    ||||||| || |||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  22327196 tttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||| | ||||||||||||| ||||  ||||||||| ||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 35019378 - 35019221
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||||||||||  |||||||| |||||| ||||  |||||||| || ||||||||||||| |||| ||||  ||| |||||| ||||||| |||    
T  35019378 cccggtgcactaaagctctcgcatacgcagggtctgggag-gggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttg 35019280  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||  ||||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||    
T  35019279 tttacaggacttgaatctgtgacctttcagtcatgtgacaacaactttacc-gttgcgcc 35019221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 10378744 - 10378884
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||||| ||||||| | |||||||  ||| |||||||| ||||||||||||||||||||| ||||||||||||| | |||             
T  10378744 cccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttct-cac--------- 10378833  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    || ||||||||||||||||| || |||||||||| ||||||||||||||||    
T  10378834 tttccaggacttgaacccgtaacctttcagtcacgtgacaacaactttacc 10378884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 39214967 - 39215117
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||||||||||||||||| |||||| |||||  ||||| ||| |||| ||||| ||  |||||||||||| ||||||| |||||||||||||||| ||    
T  39214967 cccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaagaggtt 39215066  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||| |||| ||||||||  | ||| ||| |||||| |||||| ||||||||    
T  39215067 gtttccagtacttgaacttgggaccttttagtcacgtgacaataactttac 39215117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 34679278 - 34679386
Alignment:
Q  135 catttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| ||||| | |||| | ||||  |||| |||||||||||||||||| ||||||||    
T  34679278 catttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctaggaatggaacatgtgatatttcagtcacatgacaataactttac 34679377  T
Q  235 cagttgcgcc 244  Q
    | ||||||||    
T  34679378 c-gttgcgcc 34679386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 15511157 - 15511311
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgta--cgcagtcttaccctgttttttacacaagagt 181  Q
    |||||||||||||||||  | |||||| ||||||| |||| |||| ||| ||||| |||||||||||  ||||| ||||||||||||||||||||||||     
T  15511157 cccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttacacaagagg 15511256  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
      ||| ||||||||| ||   ||||| |||||| ||||| |||||||||||||||    
T  15511257 cggtttccaggacttcaatatgtgacctttcagccacattacaacaactttacca 15511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 33223080 - 33222974
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||||||||||||  ||| |||||||||| |||||||||  |||| ||| ||||| || ||||||| |||||||||||||||||||||||||||     
T  33223080 tttggtgtattgtacgcaacctttccctgttttt-acacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttaccg 33222982  T
Q  237 gttgcgcc 244  Q
    ||||||||    
T  33222981 gttgcgcc 33222974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 25290242 - 25290153
Alignment:
Q  157 cttaccctgttttttacacaagag--tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||||||||  | |||| ||| ||||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  25290242 cttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgcc 25290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 20999859 - 20999952
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaag 178  Q
    ||||||||||||||||| |||| |||| ||||| | |||| ||| |||||||||||||||||||||||||| ||| || |||||||||||||||    
T  20999859 cccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagccttgccttgttttttacacaag 20999952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 50760288 - 50760385
Alignment:
Q  138 ttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||||||| ||||||| ||||||| ||||| ||||||||||  ||||  ||||||||||||||||||| | |||||||||||||||| ||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 244
Target Start/End: Complemental strand, 50812085 - 50811930
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgtt 186  Q
    ||||| ||||||| ||||||||| ||||  |||||| |||||| | ||||| |||||||||||||||  ||||||||||||||| ||||||||   ||||    
T  50812085 gtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accattttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtt 50811987  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     ||||||| |||  ||||||| |||||||||| |||||||||||||||| ||||||||    
T  50811986 tccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 50811930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 15505710 - 15505632
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgt 166  Q
    |||||||| |||||| ||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  15505710 cggtgcac-aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 244
Target Start/End: Original strand, 18335333 - 18335456
Alignment:
Q  121 ggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacat 220  Q
    |||||||||||||||||||| |||||||||||||   |||||||  |||||| |||||||  |||| ||||||||| |||  ||||| |||||| |||||    
T  18335333 ggaaagggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacat 18335432  T
Q  221 gacaacaactttaccagttgcgcc 244  Q
    ||||| ||||||| || |||||||    
T  18335433 gacaaaaactttatcacttgcgcc 18335456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 19974087 - 19974221
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||||||| |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||  ||| ||||  |||||||||  |||  ||||     
T  19974087 gtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaaccttgccct-atttttacacttgaggctgttt 19974185  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgac 223  Q
    ||| |||||||||||||||  |||||||||| ||||    
T  19974186 ccaagacttgaacccgtgatctttcagtcacgtgac 19974221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 27136696 - 27136811
Alignment:
Q  121 ggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcaca 219  Q
    |||| |||||||| ||||| |||||||||||||||  |||||| ||||||||||||||||| ||||| |||| |||||||| |||| | || || ||||     
T  27136696 ggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacg 27136795  T
Q  220 tgacaacaactttacc 235  Q
    ||||||||||||||||    
T  27136796 tgacaacaactttacc 27136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 45264411 - 45264542
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    |||||||||||||| ||||||| | |||||| | ||| |||||||| ||||| ||||||||| || ||| ||||| ||||||||| |||||||| |||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  187 gccaggacttgaacccgtgacatttcagtcac 218  Q
     |||||||||||||  ||||| ||||| ||||    
T  45264511 tccaggacttgaacatgtgacctttcaatcac 45264542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 31382221 - 31382330
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||| || ||||||| ||||||| | ||||||| |||| |||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||      
T  31382221 aacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacacaagaggc 31382319  T
Q  183 tgttgccagga 193  Q
    |||| ||||||    
T  31382320 tgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 2435983 - 2436052
Alignment:
Q  166 ttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||||||| ||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  2435983 ttttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 234
Target Start/End: Complemental strand, 23371271 - 23371124
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||||| || |||||| |||||| || || |||||||| ||||||||||||||||| ||  ||| ||| ||||||||| |||| |  ||    
T  23371271 cccggtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttggtgtattgtacacaaccttgccc-gttttttacccaagtggctg 23371174  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    || | |||||||||||||||||| |||||||||   || |||||||||||    
T  23371173 tttctaggacttgaacccgtgacctttcagtcatgcgaaaacaactttac 23371124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 24564443 - 24564334
Alignment:
Q  135 catttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||| ||||| ||| |||||||| | | ||| ||||| ||||| |||| |||||||||    
T  24564443 catttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttcaatcacaagacatcaactttac 24564344  T
Q  235 cagttgcgcc 244  Q
      ||||||||    
T  24564343 tggttgcgcc 24564334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 1517318 - 1517416
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagag 180  Q
    ||||||||||||||||||| | ||||||| |||||| | ||| |||||||| || |||||||||||||||||| |||| | |||||||| |||||||||    
T  1517318 aacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgttttttaacacaagag 1517416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 40424786 - 40424732
Alignment:
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgcc 40424732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 244
Target Start/End: Complemental strand, 43207640 - 43207480
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgc 188  Q
    ||||||||||||  ||||||| ||||||| |||||  ||||||| || |||||||||||||| || |||||||||||||||| ||| ||||| ||||| |    
T  43207640 tgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgtttc 43207541  T
Q  189 caggacttgaacccgtga------catttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || ||||| |||| ||||      |  ||||||||| |||||||||||||||| ||||||||    
T  43207540 caagacttaaacctgtgagtgtgtccattcagtcacgtgacaacaactttacc-gttgcgcc 43207480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 31272397 - 31272522
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccag 191  Q
    |||||||||| ||||||||| ||||||||| |      |||| |||||| |||  ||||||||| |||||| |||||| |||||||||| ||||| ||||    
T  31272397 cactaaagctcccgcatacgcagggtccggaa------cccaccatttgatgtgctgtacgcagccttaccatgtttt-tacacaagaggttgtttccag 31272489  T
Q  192 gacttgaacccgtgacatttcagtcacatgaca 224  Q
    |||||||||| ||||| |||||||||| |||||    
T  31272490 gacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 34714674 - 34714613
Alignment:
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  34714674 tgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgcc 34714613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 52910317 - 52910216
Alignment:
Q  135 catttggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    |||| |||||||||||| ||||| ||||||||||||| ||  |||||  |||| ||| || ||||||| ||||| |||||||||||||||||||||||||    
T  52910317 cattaggtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaacttta 52910218  T
Q  234 cc 235  Q
    ||    
T  52910217 cc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 23796614 - 23796519
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||| | ||||| | |||||| ||||| ||||| || ||||||||||||||||||||  |||||  || ||||||||||||||    
T  23796614 cccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacacaagag 23796519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 42304217 - 42304303
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgcagtcttaccctgttttt 170  Q
    |||||||||||||||| || |||||| |||||||||||| |||||||| ||  ||| ||||||||||||||  ||||||||||||||    
T  42304217 ccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 43768288 - 43768205
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttt 168  Q
    ||||||||| ||||||| ||| ||||| |||||| ||||| |||||||| || ||||||||||||| |||| ||||||||||||    
T  43768288 cccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 31442396 - 31442485
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgtttttt 171  Q
    |||||||||||| |||||| || |||||  || ||||||||| |||||||| ||||| |||||||||||||||  |||||||||||||||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttt 31442485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 244
Target Start/End: Complemental strand, 10163867 - 10163749
Alignment:
Q  126 gggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    |||||||| |||||| |||||||||  || ||||| | | ||||||||| ||||| |||||  ||| |||| |||  || |||||| || ||||||||||    
T  10163867 gggtcccaccatttgatgtattgtatacaatcttatcatattttttacataagaggttgttttcagaacttaaacttgtaacattttagccacatgacaa 10163768  T
Q  226 caactttaccagttgcgcc 244  Q
    |||||||| ||||||||||    
T  10163767 caactttatcagttgcgcc 10163749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 21910682 - 21910743
Alignment:
Q  109 acgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttt 170  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||| |||||    
T  21910682 acgtagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 22325039 - 22324925
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||||||| ||||||||| |||||| ||||  |||  ||| |||||  ||||||||||| |||| |||||||||| |||||||||||||  |||    
T  22325039 ggtgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccctgt-ttttacacaagaggctgt 22324942  T
Q  186 tgccaggacttgaaccc 202  Q
    | ||| |||||||||||    
T  22324941 ttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 4587570 - 4587630
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtg 143  Q
    ||||||||||||| ||||| ||||||| | |||||||||||| |||||||| |||||||||    
T  4587570 aacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatttggtg 4587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 18335914 - 18336014
Alignment:
Q  144 tattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    |||||||||||| ||||||||||| |||| |||| || || ||  ||| ||||||||  ||||| |||||| |||||| ||||||||||| || ||||||    
T  18335914 tattgtacgcagccttaccctgttctttaaacaatagattattttcagaacttgaacatgtgacctttcagacacatggcaacaactttatcacttgcgc 18336013  T
Q  244 c 244  Q
    |    
T  18336014 c 18336014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 20169109 - 20169193
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||| ||||||| | |||||||||||| | |||||| |  |||| ||||||||| |||||||||| | |||||||||||||||    
T  20169109 aaagctcccgcatatgcagggtccgggaaggagtcccaccgattggggtattgtacacagtcttacctttttttttacacaagag 20169193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 50606554 - 50606498
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt 139  Q
    ||||||||||||||||||| ||||||| | |||||||||||| |||||||| |||||    
T  50606554 aacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 14987989 - 14988084
Alignment:
Q  146 ttgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||||||||| |||| ||||| ||||||| ||||   ||||  ||||||||||||  ||||| ||  ||||| |||||||||||||||||||||||    
T  14987989 ttgtacgcagccttatcctgtattttacataagatactgttttcaggacttgaacttgtgactttctagtcatatgacaacaactttaccagttgc 14988084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 46859163 - 46859129
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgtttttt 171  Q
    |||||||||||||||||||||||||||||||||||    
T  46859163 tttggtgtattgtacgcagtcttaccctgtttttt 46859129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 233
Target Start/End: Original strand, 19656114 - 19656263
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    ||||||||| |||||||   ||||| | |||||||  |||||||||| | ||||| ||||||||||||  ||  ||||| |||||||||||||||||  |    
T  19656114 cccggtgcattaaagctcttgcatatgcagggtccaagaaagggtcctaccattttggtgtattgtacatagcgttaccatgttttttacacaagaggct 19656213  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||| ||| | ||||| |  ||||| ||| ||||||  |||||||||||||    
T  19656214 gtttccaagccttgagctagtgacctttgagtcacgcgacaacaacttta 19656263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 25554817 - 25554882
Alignment:
Q  171 tacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    |||||||||| ||||| ||||||||| ||| |||| | ||| |||||| |||||||||||||||||    
T  25554817 tacacaagaggttgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttacca 25554882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 21723811 - 21723747
Alignment:
Q  106 catacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttt 170  Q
    |||||| ||||||||||||| ||| | | ||||||||||||||||| ||| |||||||| |||||    
T  21723811 catacgcagggtccgggaaaaggttctaccatttggtgtattgtactcagccttaccctattttt 21723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 50548594 - 50548535
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtat 146  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| | |||||||| |||||||    
T  50548594 cggtgtactaaagctcccgcatacgtagggtccgaaaaaggattccatcattcggtgtat 50548535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 30555264 - 30555210
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt 139  Q
    |||||||||||||||||  |||||||| |||||||| ||| |||||||| |||||    
T  30555264 cccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 49722641 - 49722726
Alignment:
Q  144 tattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaact 230  Q
    ||||||||||| ||||||||| || |||  ||||||| |||||  || ||||| |||||||||| ||||| |||| |||||||||||    
T  49722641 tattgtacgcaatcttaccctattatttt-acaagaggttgtttacatgacttaaacccgtgacctttcattcacgtgacaacaact 49722726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 4249455 - 4249520
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgc 153  Q
    |||||| ||||||| ||||||||  | ||| |||||| || ||||| |||||||||||||||||||    
T  4249455 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 4249779 - 4249844
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgc 153  Q
    |||||| ||||||| ||||||||  | ||| |||||| || ||||| |||||||||||||||||||    
T  4249779 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 4250103 - 4250168
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgc 153  Q
    |||||| ||||||| ||||||||  | ||| |||||| || ||||| |||||||||||||||||||    
T  4250103 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 22151568 - 22151495
Alignment:
Q  170 ttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    ||||| |||||  |||| |||| |||||||||  |||| || |||||| ||||||||||||||| |||||||||    
T  22151568 ttacataagaggctgtttccagaacttgaacctatgaccttacagtcagatgacaacaactttatcagttgcgc 22151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 43768209 - 43768168
Alignment:
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgaca 224  Q
    |||| |||||||||||||||||||| ||||||| ||||||||    
T  43768209 tgtttccaggacttgaacccgtgacctttcagtgacatgaca 43768168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 4430014 - 4430078
Alignment:
Q  91 gcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcag 155  Q
    ||||||||||| ||||||||  ||| ||| | || |||| ||| |||||||||||||||||||||    
T  4430014 gcactaaagctcccgcatacacaggatccagaaaggggttccaccatttggtgtattgtacgcag 4430078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 240
Target Start/End: Complemental strand, 21723686 - 21723658
Alignment:
Q  212 cagtcacatgacaacaactttaccagttg 240  Q
    |||||||||||||||||||||||||||||    
T  21723686 cagtcacatgacaacaactttaccagttg 21723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 33594144 - 33594188
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtccca 33594188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 36720924 - 36720763
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||      
T  36720924 aaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggc 36720825  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  36720824 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgcc 36720763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 241
Target Start/End: Original strand, 28817633 - 28817791
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||| |||||||||||| ||||||||| |||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||||||||      
T  28817633 aacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggc 28817732  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  28817733 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 28817791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 35261807 - 35261646
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| ||||||| |||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||      
T  35261807 aacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaagagac 35261708  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||||||    
T  35261707 tgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 35261646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 44530277 - 44530116
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| ||||||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |    
T  44530277 aacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggt 44530178  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||| |||||||||||||||| ||  |||||||||||| |||||||||||||||||||    
T  44530177 tgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgcc 44530116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 12670257 - 12670416
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||  |||||||||      
T  12670257 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggc 12670354  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12670355 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12670416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 39461001 - 39461164
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||| || ||||  ||||||||||||||||| ||||| ||||||||||||||||||    
T  39461001 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaagag 39461100  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  39461101 gctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgcc 39461164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 13160829 - 13160669
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||| ||||| ||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||      
T  13160829 aacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggc 13160731  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| | |||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  13160730 tgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 13160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 18164767 - 18164927
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||| |||| ||||||||||||||||||  ||||||||| ||||||||||||||      
T  18164767 aacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctg-tttttacacaagaggc 18164865  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  18164866 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgcc 18164927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 7136534 - 7136697
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  7136534 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagag 7136633  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     ||||| ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||    
T  7136634 gttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgcc 7136697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 30454104 - 30454263
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| |||||||||||| |||||||| |||||| ||||||  |||||||||      
T  30454104 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgtttt--acacaagaggc 30454201  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30454202 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 30454263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 2626645 - 2626486
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtt---ttttacacaagagtttg 184  Q
    |||||||| ||||| ||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||  ||    
T  2626645 ggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctg 2626546  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || |||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  2626545 tttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgcc 2626486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 17823704 - 17823543
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| | ||||| | ||||| |||||| |||| ||| ||||||||||||| |||||||||||| |||| ||||||||||||||      
T  17823704 aacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacacaagaggc 17823605  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17823604 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 17823543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 29521692 - 29521853
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| |||||| ||||  || ||||| ||||||||||||||||||||| |||||||||||||||| |||||||      
T  29521692 aacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggc 29521791  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||| ||||||||||||| ||||||||||    
T  29521792 tgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgcc 29521853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 12626018 - 12625858
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagagt 181  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||     
T  12626018 aacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaagagg 12625919  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    ||||| ||||||||||| |||||||| |   ||||||| ||||||||||||||||||||||    
T  12625918 ttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagttgcg 12625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 45071392 - 45071238
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||| ||||| ||||||||| | |||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||      
T  45071392 aacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggc 45071294  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagt 238  Q
    |||| |||| ||||||||||||||| || || ||||||||||||||||||||||||    
T  45071293 tgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagt 45071238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 8897771 - 8897928
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| |||||| ||||||| ||||||| | |||||||||||| |||||||| |||||||||||||||||| || |||||||| ||||||||||||| | |    
T  8897771 aaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggt 8897870  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    |||| ||||||||| |||||||||| || | |||||||||||||||||||||||||||    
T  8897871 tgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttg 8897928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 20284076 - 20284239
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgtttttt--acacaag 178  Q
    |||||||||||||||| || ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||| ||||||  | |||||    
T  20284076 aacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaag 20284175  T
Q  179 agtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    ||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  20284176 aggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcg 20284239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 6760952 - 6760789
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||||| ||| |||||||| ||||  |||||||||||||| || ||||||||||||||||||||||||    
T  6760952 aacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagag 6760853  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||    
T  6760852 gctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgcc 6760789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 21070704 - 21070868
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgtttttt---acacaa 177  Q
    |||||||||||||||| || ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||| ||||||   | ||||    
T  21070704 aacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaa 21070803  T
Q  178 gagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  21070804 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcg 21070868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 244
Target Start/End: Original strand, 44781517 - 44781673
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||| ||||||||| |||||| ||||  |||||||| |||||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     |||||||||||||||||||  |||||||||| |||||||||||||||| ||||||||    
T  44781617 tccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgcc 44781673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 24365071 - 24365218
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg-ttttttacacaagagtttgt 185  Q
    |||||||| |||||| || |||||| |||||||||||| |||||||| ||||||||||||||| ||||| ||||||||| |||||||||||||||  |||    
T  24365071 cggtgcac-aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgt 24365169  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    | | ||| |||||||||||||||||| ||||||||||||||||||||||    
T  24365170 ttctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 8483947 - 8484105
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||| |||||||| ||||||||| |||||| ||||  |||||||| || |||||||||||||||||| ||| |||||||||||||||||||| |||    
T  8483947 cccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttg 8484046  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || ||||||||||||||| |||||||| |||||| || ||||  ||||||| ||||||||    
T  8484047 tttccaggacttgaacccatgacatttaagtcacgtggcaaccgctttacc-gttgcgcc 8484105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 22598279 - 22598133
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||||||||||| | ||||||||| | |||||||||||||||| || || ||||||||||||||  || |||||||||||||||||||||||| |||||     
T  22598279 ggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgttt 22598181  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  22598180 ccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 103 - 244
Target Start/End: Original strand, 20869527 - 20869664
Alignment:
Q  103 ccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaaccc 202  Q
    ||||||| | |||||||||||| ||||| || |  |||||||||||||| ||| |||||||||||||  |||||||||  |||| |||||||||||||||    
T  20869527 ccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaaccc 20869622  T
Q  203 gtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  20869623 gtgacctttcagtcacatgacaacaactttaccagttgcgcc 20869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 25250652 - 25250493
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||||| || ||||||| |  |||| |||||| |||||||| ||||  ||||||||||||||||| | |||||| |||||||||||| ||    
T  25250652 aacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaatag 25250553  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
      |||| |||||||||||||  ||||| || |||||||||||||||||||||||||||||    
T  25250552 gctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttg 25250493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 28407531 - 28407383
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||||||| |||||||||             |||||||||||||| |||||||||      
T  28407531 aacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttggtgc------------cttaccctgttttt-acacaagaggc 28407445  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  28407444 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 28407383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 5135299 - 5135423
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||| |||||| | ||||||| |||||||||||| |||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||  ||    
T  5135299 cccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctg 5135397  T
Q  185 ttgccaggacttgaacccgtgacatt 210  Q
    || |||||||||||||||||| ||||    
T  5135398 tttccaggacttgaacccgtgccatt 5135423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 26954263 - 26954107
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgtttttt-acacaaga 179  Q
    ||||| ||||||||||||| ||||||| |   |||| ||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||| ||||||||    
T  26954263 aacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaaga 26954164  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    |  |||| |||||||||||||||||||| ||  | ||||||||||||||||||||||    
T  26954163 ggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacca 26954107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 44742527 - 44742678
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    ||||||||||||| ||| |||||| ||||||||||  ||| |||||||| ||||| |||||||||||||||| |||||||||||||||||||| ||| ||    
T  44742527 cccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagatt 44742626  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||| |||| |||||||| | |||| || || ||||  |||||||||||||||    
T  44742627 gtttccagaacttgaactcatgaccttacaatcacgcgacaacaactttacc 44742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 29877217 - 29877111
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||||||||| ||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||  ||||     
T  29877217 ggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgttt 29877118  T
Q  188 ccaggac 194  Q
    |||||||    
T  29877117 ccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 389770 - 389642
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt--acacaagagttt 183  Q
    ||||||||||||||||  |||||||| |||||| || || || ||||||||||||||||||||||||||  |||||||||||||||  |||||||||  |    
T  389770 ccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggt 389671  T
Q  184 gttgccaggacttgaacccgtgacatttc 212  Q
    ||| |||||||||||||||||||| ||||    
T  389670 gtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 31457297 - 31457155
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    ||||||||||| |||| ||||||||| |||||  ||||| |||||| | |||||| |||||||||||||| |||  ||| ||||| ||||||||| ||||    
T  31457297 ccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctattttt-acacaagaggttgt 31457199  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaac 229  Q
    |  ||||||||||||||||||| |||||| ||||||||||||||    
T  31457198 ttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 11748366 - 11748269
Alignment:
Q  144 tattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||||||||| ||||||||||| |||||||| |||||  |||| ||| ||||||||||||||||||||||||||||||||||||| || |||||||||    
T  11748366 tattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgc 11748269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 35106023 - 35105902
Alignment:
Q  112 tagggtccgggaaagggtcccatcatt-tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatt 210  Q
    |||||||| ||||  ||||||| |||| ||||||||||||||||| ||||| || | ||||||||||||| ||||| |||||||||||||||||||| ||    
T  35106023 tagggtccaggaagaggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctt 35105924  T
Q  211 tcagtcacatgacaacaacttt 232  Q
    |||| ||| |||||||||||||    
T  35105923 tcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 241
Target Start/End: Complemental strand, 24245565 - 24245421
Alignment:
Q  95 taaagcttccgcatacgtagggtccgggaaagggtcccatcattt---ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccag 191  Q
    ||||||| ||||||||| ||||||| |||| ||||||||  ||||   |||| |||||||| ||||||||||||||    ||| |||||   ||| ||||    
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgtt----acataagagac-gtttccag 24245471  T
Q  192 gacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24245470 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 24245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 20870053 - 20869941
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  |||||| |||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  20870053 aacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 20869954  T
Q  181 tttgttgccagga 193  Q
      |||| ||||||    
T  20869953 actgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 40604917 - 40605073
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||||| |||||||||||||||   |||| || ||| ||||||| ||||||||||||||  |||| ||  |||||||||||| || |||||    
T  40604917 cggtgcactaaagctcccgcatacgtagggtttcggaagggatcc-atcatttagtgtattgtacgcaaccttatccaattttttacacaaaagattgtt 40605015  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     ||| ||||||||||| | |   | || ||||||||||||||||||||||||||||||    
T  40605016 tccatgacttgaacccataatcatccaatcacatgacaacaactttaccagttgcgcc 40605073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 14018029 - 14018136
Alignment:
Q  136 atttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||| |||||||||||||||||| |||||||||||||||||||||  |||| ||| ||||||||||| |||| ||||| |||| |||||||||| |||||    
T  14018029 atttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattacc 14018128  T
Q  236 agttgcgcc 244  Q
     ||||||||    
T  14018129 -gttgcgcc 14018136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 16225149 - 16225050
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| || ||||| ||||  |||||||||||||||||||||||||||||||||||| |||||    
T  16225149 aacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttacataagag 16225050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 42083712 - 42083866
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgc 188  Q
    |||||||||||| || | |||  ||||| |||||| |||||||| ||||| ||| || ||||||||| ||| |||  |||||||||||| ||  |||| |    
T  42083712 tgcactaaagctcccacgtacacagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttc 42083811  T
Q  189 caggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||    
T  42083812 caggacttgaacccgtgacctttcagtcacgtgacaacaattttacc-gttgcgcc 42083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 5689756 - 5689662
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||||| || |||||| | ||| |||||| |||| ||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5689756 ccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagag 5689662  T

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Target: chr8; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 10857957 - 10857859
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| | ||||| ||||  ||||||| || |||||||||||| ||||| ||||||||||| |||||||||||||    
T  10857957 aacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttacacaagag 10857859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 17250888 - 17251001
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||| |  |||||| ||||| ||||||||||||||| ||||  ||||||||||||||| | |||| |||||||||||||||||||  || |    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgct 17250987  T
Q  187 gccaggacttgaac 200  Q
     |||||||||||||    
T  17250988 tccaggacttgaac 17251001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 23000260 - 23000365
Alignment:
Q  117 tccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtc 216  Q
    |||||||| |||||||| |||||||||||||||| | |  |||||| || ||||||||||||||  |||| |||||||||  ||||||||| ||||||||    
T  23000260 tccgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtg-tttttacacaagaggctgtttccaggactt--acccgtgacctttcagtc 23000356  T
Q  217 acatgacaa 225  Q
    |||||||||    
T  23000357 acatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 19729462 - 19729382
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    |||||||| |||| ||| ||| | |||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 11000986 - 11001109
Alignment:
Q  113 agggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt-ttacacaagagtttgttgccaggacttgaacccgtgacattt 211  Q
    ||||| |||| | |||||||| ||||||||||||||||| ||| |||| | |||||| |||||||  || |||||  ||| | ||||||||| ||| |||    
T  11000986 agggttcgggtaggggtcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaatttgaacccgcgaccttt 11001085  T
Q  212 cagtcacatgacaacaactttacc 235  Q
    || |||||||||||||||||||||    
T  11001086 caatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 26102645 - 26102578
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgta 150  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||    
T  26102645 aacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 30962847 - 30962929
Alignment:
Q  150 acgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttt 232  Q
    |||||| || ||||| |||||||||||||||  |||| ||||||||||||  |||||| ||||| ||||||||||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 36918199 - 36918102
Alignment:
Q  136 atttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||  ||||| |||| ||||||||  ||||| |||||||  ||| ||||||| ||||    
T  36918199 atttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttcagttccataacaacaatttta 36918102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 35107318 - 35107374
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt 139  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||||||| |||||    
T  35107318 aacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 26457855 - 26457776
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccct 164  Q
    ||||||||||||||||||| || |||||| | |||| ||  | |||||||| || |||||||||||||||||| ||||||||    
T  26457855 aacccggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccaccaattggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 27508038 - 27507988
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| ||||||||    
T  27508038 aacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtccca 27507988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 27468099 - 27468140
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaa 124  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  27468099 aacccggtgcactaaagctcccgcatacgcagggtccgggaa 27468140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 27635057 - 27635020
Alignment:
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacat 220  Q
    |||| |||||||||||||||||||||||||||||||||    
T  27635057 tgtttccaggacttgaacccgtgacatttcagtcacat 27635020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 33867080 - 33866957
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccggga--aagggtc-ccatcatttggtgtattgtacgcagtcttaccctg-ttttttacacaag 178  Q
    ||||||||||||||||||||| ||||||| ||||| |||||  ||| ||| ||||  |||  ||||||||| |||||||||||||| ||||||||||||     
T  33867080 aacccggtgcactaaagcttctgcatacgcagggttcgggaagaagtgtcaccat-tttttatgtattgtatgcagtcttaccctgcttttttacacaaa 33866982  T
Q  179 agtttgttgccaggacttgaacccg 203  Q
    |  |||||   ||||||||||||||    
T  33866981 aagttgtttttaggacttgaacccg 33866957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 43942427 - 43942355
Alignment:
Q  110 cgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||| ||| ||||| |||||||| |||||  |||||||||||||||| |||||||||||||| ||| |||||    
T  43942427 cgtagagtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagag 43942355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 23286374 - 23286418
Alignment:
Q  125 agggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||    
T  23286374 agggtcccaccatttggtgtattgtacgcagctttaccctgtttt 23286418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 40607839 - 40607890
Alignment:
Q  191 ggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |||||||||| | ||||||| |||| |||||||||||||||||||| |||||    
T  40607839 ggacttgaactcatgacattccagttacatgacaacaactttaccaattgcg 40607890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 16013584 - 16013511
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgca 154  Q
    ||||||||||||||||||| ||||||| | |||||| ||||| ||||| || ||  ||| ||||||||||||||    
T  16013584 aacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 18595966 - 18595910
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt 139  Q
    |||||| ||||||||| || ||||||||  |||||||||||| |||||| |||||||    
T  18595966 aacccgatgcactaaaactcccgcatacacagggtccgggaaggggtcctatcattt 18595910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 242
Target Start/End: Original strand, 23286431 - 23286459
Alignment:
Q  214 gtcacatgacaacaactttaccagttgcg 242  Q
    |||||||||||||||||||||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcg 23286459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 11617595 - 11617756
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||| | | ||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  11617595 aacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggt 11617694  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  11617695 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 2541026 - 2541188
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| |||| ||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||      
T  2541026 aacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggc 2541125  T
Q  183 tgttgccaggacttgaacccgtgacattt-cagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  2541126 tgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgcc 2541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 42798797 - 42798636
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||| ||||||| |||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||      
T  42798797 aacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagac 42798698  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  42798697 tgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 42798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 21172016 - 21172175
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  21172016 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 21172113  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21172114 tgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgcc 21172175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 19426897 - 19427057
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||| |||||  |||||| | |||||||| ||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||      
T  19426897 aacccggtgcactgaagctctcgcatatgcagggtccgagaa-gggtcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggc 19426995  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  19426996 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 19427057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 48735129 - 48735289
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| ||||||  || ||||||||||||| |    
T  48735129 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc--gtgttttacacaagaggt 48735226  T
Q  183 tgttgcc-aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48735227 tgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 48735289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 32758387 - 32758228
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||  |||||||||      
T  32758387 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt--acacaagaggc 32758290  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  32758289 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 32758228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 35334823 - 35334982
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| | ||||||| |||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||  |||      
T  35334823 aacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacac--gagac 35334920  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  35334921 tgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgcc 35334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 27629762 - 27629601
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||| ||||| ||||||| | |||| ||||||| |||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||      
T  27629762 aacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggc 27629663  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  27629662 tgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgcc 27629601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 42805654 - 42805491
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| |||||||| ||||  ||||||||||||| ||| ||||||||||||||||||||||||    
T  42805654 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagag 42805555  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  42805554 gctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgcc 42805491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 22698974 - 22699136
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaa-gggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaaga 179  Q
    |||||||||||||| |||| ||||||||  ||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||||||||||||||    
T  22698974 aacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaaga 22699073  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |  | || ||||||||||||||| | || ||||||||||||||||||||||||||||||||||    
T  22699074 gactatttccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcg 22699136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 10693080 - 10693239
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| |||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||  |||||||||      
T  10693080 aacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttt--acacaagaggc 10693177  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  10693178 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgcc 10693239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 43557603 - 43557441
Alignment:
Q  83 aacccggtgcactaaa-gcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaaga 179  Q
    |||||||||||||||| ||| ||||||||| || ||||||||  |||||||| ||||  ||||||||||||||||| ||||| |||||||||||||||||    
T  43557603 aacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaaga 43557504  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |  |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  43557503 ggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcg 43557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 33871917 - 33872070
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| ||||||||||||||  |||||||  |||||| ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||||||||| |    
T  33871917 aacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttt-tacacaagaggt 33872015  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccag 237  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  33872016 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 114 - 244
Target Start/End: Complemental strand, 46354293 - 46354161
Alignment:
Q  114 gggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacattt 211  Q
    ||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||     
T  46354293 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttc 46354194  T
Q  212 cagtcacatgacaacaactttaccagttgcgcc 244  Q
    || ||||||||||||||||||||||||||||||    
T  46354193 caatcacatgacaacaactttaccagttgcgcc 46354161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 7879766 - 7879642
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||| ||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |    
T  7879766 aacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagat 7879667  T
Q  183 tgttgccaggacttgaacccgtgac 207  Q
    |||| ||||||||||||||||||||    
T  7879666 tgtttccaggacttgaacccgtgac 7879642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 47716589 - 47716430
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||| |||||| ||||||| |  ||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  47716589 aacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 47716490  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
      |||| |||||||||||||||||||| || |||||||||| |||||||||| |||||||    
T  47716489 gctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttg 47716430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 42391107 - 42391251
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  ||||||||||||       
T  42391107 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaagc 42391204  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaac 229  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||    
T  42391205 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 14099035 - 14099165
Alignment:
Q  105 gcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgt 204  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||  | || ||||||||| ||||| |    
T  14099035 gcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccat 14099134  T
Q  205 gacatttcagtcacatgacaacaactttacc 235  Q
    ||| |||||||||||||||||||||||||||    
T  14099135 gacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 14409052 - 14409182
Alignment:
Q  105 gcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgt 204  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||  | || ||||||||| ||||| |    
T  14409052 gcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccat 14409151  T
Q  205 gacatttcagtcacatgacaacaactttacc 235  Q
    ||| |||||||||||||||||||||||||||    
T  14409152 gacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 87 - 244
Target Start/End: Complemental strand, 40464000 - 40463844
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||| ||||| ||||||||| |||||||| ||| |||||||| ||||||||||||| ||||||| ||||||| | ||||||||||||||  ||||    
T  40464000 cggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccag-tttttacacaagagactgtt 40463902  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     | | |||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  40463901 tctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgcc 40463844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 34626215 - 34626374
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||| || ||||||||| ||||||||| |||||||||||| || ||||| |||||||||||||| |||||| ||||||||| |||||||||| |||      
T  34626215 aacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg-tttttacacaggaggc 34626313  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    |||| |||||||||||| | ||| | ||||| |||||||||||||||||||||||||||||    
T  34626314 tgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgc 34626374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 23419683 - 23419841
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||| |||||||||||  ||||| ||| | ||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  23419683 cccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctg 23419782  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || |||| ||||||||| ||||| ||| |||||||||||| |||||||||| ||||||||    
T  23419783 tttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgcc 23419841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 47077865 - 47078021
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    ||||||||||| |||| ||||||| |||||||  ||||| |||||||| ||||| ||||||||||||||   |||  || | |||||||||||||  |||    
T  47077865 ccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaacttta--ctctattttacacaagagactgt 47077962  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47077963 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 47078021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 250
Target Start/End: Complemental strand, 19265939 - 19265777
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||||| || |||| ||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||  |||||||||||| |  ||    
T  19265939 cccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-ctttttacacaagcggctg 19265842  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcctatgct 250  Q
    |  ||| |||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||    
T  19265841 tatccaagacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaatgct 19265777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 235
Target Start/End: Complemental strand, 29907546 - 29907393
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    ||||||||||||||||||| ||||||||  |||||||||||  |||||||| ||||| ||||||||| |||||| ||||| || |||||||||||||||     
T  29907546 aacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacacaagagg 29907449  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatg--acaacaactttacc 235  Q
     |||| | |||||||||||||||||| |||||||||||||  ||||||||||||||    
T  29907448 ctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 19266564 - 19266426
Alignment:
Q  97 aagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggactt 196  Q
    ||||| ||||||||| |||||||||||| || |||||  |||||||||||||||||||| ||||||||||||||||| |||| |  | ||  ||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggactt 19266465  T
Q  197 gaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||  ||| |||||||||||||||||||||||||||    
T  19266464 gaacccacgacctttcagtcacatgacaacaactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 38262206 - 38262340
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||||||||| ||||||||| || || |||||| ||||||||||||||||||||||||| |||   ||||| | |||||||||||||||  |||    
T  38262206 ccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgt 38262305  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacat 220  Q
    | |||||||||||||||||||| || |||||||||    
T  38262306 ttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 18512460 - 18512588
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| |||||| |||||| ||||||||| |||||||||||| |||||||| |||| |||||||||||||||| ||||||||  |||||||||||||  |    
T  18512460 aacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgt 18512558  T
Q  183 tgttgccaggacttgaacccgtgacatttc 212  Q
    |||| |||||||||||||||||||| ||||    
T  18512559 tgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 5180169 - 5180323
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||| ||||||| | ||||||||||| |  || || |||||| |||||||  ||||| |||||| |||||||||||||||||| |||||||||  ||||     
T  5180169 tgcattaaagctcctgcatacgtaggatttggaaaggggtccaatcatttttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgttt 5180268  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |||| | |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5180269 ccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcg 5180323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 28362155 - 28362312
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||| |||||| || |||| | | |||| ||||| |||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||   |    
T  28362155 cccggtgcac-aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcag 28362253  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || | |||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||    
T  28362254 tttctaggacttgaacctgtgacctttcagccacatgacaacaactttacc-gttgcgcc 28362312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 42476999 - 42476840
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| ||||||||| |||| ||||||| | || | |  |||| |||||||| ||||||||||||||||||||| |||||| ||||||  |||||||||      
T  42476999 aacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttt--acacaagagac 42476902  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||| ||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||    
T  42476901 tgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgcc 42476840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 244
Target Start/End: Original strand, 48123534 - 48123651
Alignment:
Q  126 gggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    |||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||  |||| ||||||||||||||| |||| |||||| ||||||| ||    
T  48123534 gggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataa 48123633  T
Q  226 caactttaccagttgcgcc 244  Q
    |||||||||| ||||||||    
T  48123634 caactttacc-gttgcgcc 48123651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 14732831 - 14732990
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||||||||||||| |||||||   ||||| |||||| | ||  || ||  |||||||||||| |||||| ||||||||||||||||||   |||  |    
T  14732831 ccggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggct 14732929  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  14732930 gtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgcc 14732990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 225
Target Start/End: Complemental strand, 18747613 - 18747472
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg-ttttttacacaagagttt 183  Q
    ||||||||||||||||| ||||||||| ||||| | |||| |||||||| || |||||||||| ||||||| ||||||||| |||||||||||| ||  |    
T  18747613 cccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggct 18747514  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    ||| ||| ||||||| |||||||| |||||||||| ||||||    
T  18747513 gtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 13805216 - 13805077
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| ||||||||| ||||||| ||||  ||||||| ||||||||||||||||| ||| |||||||  | |||||||| ||||  | || ||||||||    
T  13805216 aaagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccc-tgttttacaccagaggctatttccaggact 13805118  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  13805117 tgaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 7645030 - 7644931
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    |||||||||||||||||  |||||||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||| | ||||||| |||||||    
T  7645030 tttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 12473378 - 12473271
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||||||||||||  |||||||||||||| ||||||||| |||||  |||||||||||||| |||| ||||||  |||||||||||||||||||     
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccg 12473279  T
Q  237 gttgcgcc 244  Q
    ||||||||    
T  12473278 gttgcgcc 12473271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 8148989 - 8149110
Alignment:
Q  120 gggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttta-cacaagagtttgttgccaggacttgaacccgtgacatttcagtcac 218  Q
    ||||| |||||||| ||||||||||||||||||||  |||||||| ||||||| |||||||| | |||  |||||||||||| |||||| || |||||||    
T  8148989 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcagtcac 8149088  T
Q  219 atgacaacaactttaccagttg 240  Q
    ||||||||||| ||||||||||    
T  8149089 atgacaacaacattaccagttg 8149110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 42101899 - 42102044
Alignment:
Q  91 gcactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcc 189  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||| || ||| | ||| |||||||||| ||||||||||||||||  |||||  |||| ||    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttcc 42101998  T
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||||||||   |||| || ||||||| ||||||||||||||||    
T  42101999 aggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 31591116 - 31591245
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | | |||||||||| |||||||| |||||  |||||||||||||| ||||| |||  ||||||||||||| |    
T  31591116 aacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctg--ttttacacaagaggt 31591213  T
Q  183 tgttgccaggacttgaacccgtgacatttcag 214  Q
    |||| ||||||||||||| |||||| ||||||    
T  31591214 tgtttccaggacttgaactcgtgacctttcag 31591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 6736984 - 6736867
Alignment:
Q  115 ggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcag 214  Q
    ||||||||||||| ||| | |||||||||||||||| ||||||||||| ||||||| | ||||||| |||||   |||||||||||||||||| ||||||    
T  6736984 ggtccgggaaaggctcc-accatttggtgtattgtatgcagtcttaccttgttttt-atacaagaggttgttttgaggacttgaacccgtgacctttcag 6736887  T
Q  215 tcacatgacaacaactttac 234  Q
    || |||||||||||||||||    
T  6736886 tcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 11741921 - 11741774
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||  | ||  |||||||| || ||||| ||||||||||||||||||||| |||||||| ||||  |||| |||       
T  11741921 aacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctatttt--acactagaagc 11741824  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttt 232  Q
    ||||  |||||||||||||| |||| ||||||||||||||||||||||||    
T  11741823 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 236
Target Start/End: Complemental strand, 39124018 - 39123865
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtctt----accctgttttttacacaagagt 181  Q
    ||||||| |||||| || |||||| |||||||||||| |||||||| |||||  |||||||| ||||||| |||    ||||||||||| |||||||||     
T  39124018 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagaga 39123920  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
      ||| | |||||||||||||||| | ||||||||||||||||||||||||||||    
T  39123919 ccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 1408582 - 1408469
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||| ||||||| ||| ||||||| |||||||||||| |||||||| |||||| |||||||||| ||| |||||| |||||||||||||||||  | |    
T  1408582 ccggtgaactaaagattctgcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctat 1408483  T
Q  186 tgccaggacttgaa 199  Q
    | ||||||||||||    
T  1408482 ttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 244
Target Start/End: Original strand, 2662941 - 2663099
Alignment:
Q  81 ggaacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||| ||||||| ||| |||| ||||||| | |||||| |  ||||||||||| ||||||||||||||||||||| |||||||  | |||||||||||||    
T  2662941 ggaatccggtgcgctagagctcccgcatatgcagggtctga-aaagggtcccaccatttggtgtattgtacgcagccttaccc--tattttacacaagag 2663037  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| ||||||||||||||  ||||  | ||||||||| ||||||||||||| |||||||||    
T  2663038 gctgtttccaggacttgaacctatgac--tccagtcacataacaacaactttactagttgcgcc 2663099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 35203557 - 35203437
Alignment:
Q  95 taaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccagg 192  Q
    ||||||| |||||||||||| || | |||| || ||||| |||||  ||| ||||||||||||||||| |||||||||||||||||||  |||| |||||    
T  35203557 taaagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccagg 35203458  T
Q  193 acttgaacccgtgacatttca 213  Q
    ||||||||||||||| |||||    
T  35203457 acttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 16341405 - 16341254
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||||||| |||||| ||||||| |   ||||||||||  || |||| ||||| ||||||||||||| || ||||||||||||||||||||||||  |    
T  16341405 cccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacacaagaggct 16341306  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||| | || ||||||||||||||| |||||   |||||| ||||||||||||    
T  16341305 gtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 21566562 - 21566439
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    ||||||||||||||||| ||||||| | ||||| |||||| |||||| | ||||| |||||||||||||||||||| | ||||||||||||||||||       
T  21566562 cccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcg 21566463  T
Q  184 gttgccaggacttgaacccgtgac 207  Q
    ||| ||| |||||||||| |||||    
T  21566462 gtttccaagacttgaacctgtgac 21566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 42495917 - 42496003
Alignment:
Q  157 cttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||| | |||||||  |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  42495917 cttaccctgttttt-atacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgcc 42496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 1423972 - 1424078
Alignment:
Q  138 ttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccag 237  Q
    |||||||| |||| ||||  |||||||||||||||||||| ||  |||| |||||| ||||| ||||||| || ||||||||| ||||||||||||||||    
T  1423972 ttggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccag 1424071  T
Q  238 ttgcgcc 244  Q
    |||||||    
T  1424072 ttgcgcc 1424078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 23231681 - 23231588
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||| ||||||||| ||||| |||||| ||||||||||||| |||||||| ||||||| |||||| | | |||||||||||||    
T  23231681 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagag 23231588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 28078175 - 28078299
Alignment:
Q  119 cgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcac 218  Q
    |||||| |||||||| |||||||||||||| | |||  |||||||||||||||  ||| |||  |||| | |||||||||||||||||| || |||||||    
T  28078175 cgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgttttttt-acacgagactgtttctaggacttgaacccgtgaccttacagtcac 28078273  T
Q  219 atgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||| || |||||||||    
T  28078274 atgacaacaacttcacgagttgcgcc 28078299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 38604654 - 38604558
Alignment:
Q  84 acccggtgcact-aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||| |||||| ||||||||| ||||||||| || ||||| || ||||||||||||||||||||| |||||||||| |||||||||||||    
T  38604654 acccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagag 38604558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 3469190 - 3469346
Alignment:
Q  91 gcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgtttt--ttacacaagagtttgtt 186  Q
    ||||||||||| ||||||||  ||||||  |||| |||||||  |||||  |||||||||||||||  | |||||||||||  |||||||||||  ||||    
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtt 3469289  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     | |||||||||  | ||||| ||||||||||||||||||||||||||| ||||||||    
T  3469290 tctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 3469346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 7193127 - 7193052
Alignment:
Q  169 tttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgcc 7193052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 18327087 - 18327001
Alignment:
Q  157 cttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||| |||||||||  |||| || ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  18327087 cttaccctgttttt-acacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgcc 18327001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 32233144 - 32233286
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||| ||||| || |||| | |||||  ||||| |  ||||| ||||||||||| | ||||| | ||||||||||||| |||||||||| |||    
T  32233144 cccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttt-tacacaagaggttg 32233242  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaa 228  Q
    || ||||||||||||||| |||| |||||||||  |||||||||    
T  32233243 tttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 7794596 - 7794673
Alignment:
Q  166 ttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    ||||||||| |||||  |||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  7794596 ttttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgc 7794673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 27889323 - 27889395
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcag 155  Q
    ||||||||| || |||||| ||||||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  27889323 aacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 35787276 - 35787372
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||| | ||||| ||||||||| | |||||||||| |||||||  ||||||||||||||||||||  |||||| || ||||||||||||||    
T  35787276 aacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatg-tttttacacaagag 35787372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 235
Target Start/End: Original strand, 44123641 - 44123780
Alignment:
Q  95 taaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggac 194  Q
    ||||||| | ||||||| || ||||| ||| ||||||||| || |||||||||  | |||  |||||| |||||| ||||||||||  |||| |||| ||    
T  44123641 taaagctcctgcatacgcagtgtccgagaacgggtcccattatatggtgtatttcatgcaaccttaccttgtttt-tacacaagaggctgtttccagtac 44123739  T
Q  195 ttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||||||| |  |||||||||||||||| ||||||||||    
T  44123740 ttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 25198854 - 25198689
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg-ttttttacacaagagt 181  Q
    |||||||||||||||||||  | |||||| |||||| ||||| || ||| | ||||| ||| ||| ||||| |||||||| || |||||||||||| ||     
T  25198854 aacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccatttagtgcattatacgcggtcttaccttgtttttttacacaaaaga 25198755  T
Q  182 ttgttgccaggac---ttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     |||| ||| |||   |||| ||| |||  ||||||||| ||||||||||||||||||||| ||||    
T  25198754 ctgtttccaagactttttgatcccatgatctttcagtcatatgacaacaactttaccagttacgcc 25198689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 36267827 - 36267897
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaa-gggtcccatcatttggtgtattgtacgcag 155  Q
    |||||||||||||||| ||||||||  ||||| ||||||| |||||| | |||||||||||||||||||||    
T  36267827 ccggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgcag 36267897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 33500623 - 33500556
Alignment:
Q  103 ccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgcagtcttaccctgttt 168  Q
    ||||||||| |||||||||||| |||||||| ||  ||| |||||| |||||||||||||||||||||    
T  33500623 ccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgttt 33500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 39093448 - 39093532
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt-tggtgtattgtacgcagtcttaccctgttt 168  Q
    ||||||||||||||||||| ||||| | | | |||||||| || |||||  ||| ||||||||||||| ||||||||||||||||    
T  39093448 cccggtgcactaaagcttctgcatatgcaagttccgggaagggttcccactattatggtgtattgtacacagtcttaccctgttt 39093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 5814525 - 5814438
Alignment:
Q  157 cttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||| ||||||||| ||||| || || |||  ||||||||||||||| || || |||||| ||||||||||||||  |||||||    
T  5814525 cttaccctattttttacataagaggttctttccaaaacttgaacccgtgactttccaatcacataacaacaactttaccgattgcgcc 5814438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 21139761 - 21139851
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||||||  || || |||||| |||||||| ||||||||||| ||||  ||  ||||| ||| ||||||||||||||    
T  21139761 gtgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctg-tttttacacaagag 21139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 13792161 - 13792250
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttgg-tgtattgtacgcagtcttaccctgttttttacac 175  Q
    |||||||| |||||| | ||||||| ||||| || ||| |||||||  ||||||| ||||||||| |||||||||||  |||||||||||    
T  13792161 cggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccatttgggtgtattgtatgcagtcttaccaagttttttacac 13792250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 22065632 - 22065563
Alignment:
Q  167 tttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    |||||||||||||| ||||| |||  |||||||| | |||| ||||| |||| |||||||||||||||||    
T  22065632 tttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacca 22065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 23065935 - 23066032
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    ||||||||| |||||| || |||| | ||| | ||| || || ||||||||| ||||||||||||||||   ||| ||||||||||| ||||||||||    
T  23065935 ccggtgcaccaaagctcccacatatgcaggattcggaaagggatcccatcatatggtgtattgtacgcaactttatcctgttttttaaacaagagttt 23066032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 29140487 - 29140528
Alignment:
Q  203 gtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  29140487 gtgacctttcagttacatgacaacaactttaccagttgcgcc 29140528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 21447636 - 21447557
Alignment:
Q  165 gttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||  ||||  || |||||||| ||||||| || || | |||||||||||| |||| ||||||||||    
T  21447636 gttttttacacaagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgcc 21447557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 43852111 - 43852026
Alignment:
Q  142 tgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||||||  || |||||||||||||||||| ||||| || ||  |||||||||||||||||||       |||||||||||||||||||||    
T  43852111 tgtattgtacatagccttaccctgttttttacagaagaggtt-ttttcaggacttgaacccgtgac-------tcacatgacaacaactttacc 43852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 45018930 - 45019006
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca----tttggtgtattgtacgcag 155  Q
    |||| |||||||||||||| ||||||||| |||||||||||| |||| ||| ||    |||||| ||||||||||||    
T  45018930 aacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcag 45019006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 27697565 - 27697452
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccggg-aaagggtccc--atcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||| | ||||| ||||||||| |||||| ||| ||||||||||  | ||||| ||||||||  || ||| ||| ||||| ||||||||||||||    
T  27697565 cccggtgcatttaagctcccgcatacgcagggtctggggaaagggtcccccaccattttggtgtatt--acacagccttgccctgatttttacacaagag 27697468  T
Q  181 tttgttgccaggactt 196  Q
     ||||| |||||||||    
T  27697467 gttgtttccaggactt 27697452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 15108457 - 15108528
Alignment:
Q  136 atttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgaca 208  Q
    ||||| |||||||||| ||| |||||| |||||| |||||||||   |||| ||||||||||||| |||||||    
T  15108457 atttgatgtattgtacacagccttaccttgtttt-tacacaagaaactgtttccaggacttgaactcgtgaca 15108528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 28685267 - 28685299
Alignment:
Q  209 tttcagtcacatgacaacaactttaccagttgc 241  Q
    ||||||||||||||||||||||||| |||||||    
T  28685267 tttcagtcacatgacaacaactttaacagttgc 28685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 36602575 - 36602535
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccggga 123  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  36602575 aacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 42495874 - 42495910
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaa 124  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  42495874 ggtgcactaaagctcccgcatacgcagggtccgggaa 42495910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 7e-58; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 8455323 - 8455484
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| | ||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||      
T  8455323 aacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggc 8455422  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  8455423 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 8455484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 10543828 - 10543665
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||    
T  10543828 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagag 10543729  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
       ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  10543728 gccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgcc 10543665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 14530448 - 14530285
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||  |||||||||||||| || |||||||||||||||| |||||||    
T  14530448 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagag 14530349  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14530348 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 14530285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 9671307 - 9671147
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  9671307 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 9671210  T
Q  183 tgttgccaggacttgaacccgtgacattt-cagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  9671209 tgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgcc 9671147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 12023929 - 12024086
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||| ||||||||||  ||||| |||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||  |||    
T  12023929 ccggtgcattaaagcttccaaatacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgt 12024027  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12024028 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 12024086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 11514560 - 11514403
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||||| ||||||||||||||||||||| |||||  |||||||||||||||||  |||    
T  11514560 ccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgt 11514462  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    | |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  11514461 ttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 11514403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 241
Target Start/End: Original strand, 24200630 - 24200790
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||||||||  | |||||  |||||||||||| || ||||| |||||  |||||||||||||||| ||||||||||||||||||||||||    
T  24200630 aacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagag 24200729  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
      |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24200730 gctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 21779268 - 21779427
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||  |||||||||  |||||||||||||      
T  21779268 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacacaagaggc 21779365  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||  |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  21779366 tgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgcc 21779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 17623692 - 17623535
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| |||||||||||||||| |||||| ||| | |||||| |||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||| |    
T  17623692 aacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggt 17623593  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    |||| | |||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  17623592 tgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 17668130 - 17667973
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||  ||||| ||||| || ||| |||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||| |    
T  17668130 aacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggt 17668031  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
    | || |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  17668030 tctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 23397892 - 23397736
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| |||||||||| ||| |||||||| |||||||||||||||||| || |||||||| ||||  |||||||||      
T  23397892 aacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctatttt--acacaagaggc 23397795  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  23397794 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgc 23397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 10546291 - 10546153
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagagt 181  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||     
T  10546291 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaagagg 10546192  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacat 220  Q
     |||| |||||||||||||||||||| ||||||||||||    
T  10546191 atgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 25079724 - 25079886
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt-ttacacaagagt 181  Q
    |||||||||||||||||||   ||||||| |||||||||||| |||||||| |||| |||||||||||||||  |||||| |||||| |||||||||||     
T  25079724 aacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaagagg 25079823  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| | | |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  25079824 ttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 25079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 25249745 - 25249905
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||||||||  |||||||| ||||| |||||| || ||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||      
T  25249745 aacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctg-tttgtacacaagagac 25249843  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||| |||||||||||||||| || ||||||||||||||||||||||||| |||||||    
T  25249844 tgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgcc 25249905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 17896381 - 17896228
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttgc 188  Q
    |||||||||||| || |||||| |||||||| ||| |||||||| |||||||| |||||||||||| |||||||| |||||| ||||||||| ||||| |    
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttc 17896282  T
Q  189 caggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
     |||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  17896281 taggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcg 17896228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 40416878 - 40417031
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||||||||  |||||| | |||||||   |||||||||||||| |||||||||||||| ||| ||| |||||||||||| ||||||| |    
T  40416878 aacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttatacaagaggt 40416977  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    |||| ||| |||||||||||||||| || |||||||||||||||||||||||||    
T  40416978 tgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 39914313 - 39914474
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt-ttacacaagagt 181  Q
    |||||| |||||||||||| ||||||||| |||||| || || |||||||| |||| |||||||||||| ||  ||||||||||||| |||||||||||     
T  39914313 aacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagagg 39914411  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| |||| |||||| |||||||| || |||||||||||||||||||||||||| ||||||    
T  39914412 ttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttaccagatgcgcc 39914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 14444856 - 14444720
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| |||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| |||| ||| |||||||||| |||||||||||||      
T  14444856 aacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgt-ttttacacaagaggc 14444758  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacat 220  Q
    |||| |||||||||||||||||||| || |||||||||    
T  14444757 tgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 27573748 - 27573588
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||| |||||||||||| || |||||  |||||  |||||| ||| ||| ||||||||||||||||||||| |||||| ||||| | |||||||||      
T  27573748 aacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgtttat-acacaagaggc 27573650  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  27573649 tgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgcc 27573588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 5450387 - 5450263
Alignment:
Q  110 cgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttgccaggacttgaacccgtgaca 208  Q
    |||||||||| |||| |||||||| | ||||||||||||||||||| |||||| |||||||| ||||||||| ||||| |||||| |||||||||||||     
T  5450387 cgtagggtccaggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacc 5450288  T
Q  209 tttcagtcacatgacaacaacttta 233  Q
    |||||||||||||||||||||||||    
T  5450287 tttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 32781308 - 32781448
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| ||||||||  |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagact 32781407  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||| |||||| ||||||  ||||  ||||||||||||||    
T  32781408 tgaactcgtgacctttcagcaacattgcaacaactttacca 32781448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 4516360 - 4516518
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||| ||||||||||||| |||||| |||||||||||| |||||||| || ||||||||||||||||||  || ||||||||||||||||||||  ||    
T  4516360 cccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctg 4516459  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || | || |||||||   ||||| |||||||||| |||||||||||||||| ||||||||    
T  4516460 tttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc-gttgcgcc 4516518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 22371152 - 22371028
Alignment:
Q  113 agggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttc 212  Q
    |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||   ||| |||  |||| |||||||||||||||||||| |  |    
T  22371152 agggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttccaggacttgaacccgtgacctccc 22371056  T
Q  213 agtcacatgacaacaactttaccagttg 240  Q
    ||||||||||||||||||||||||||||    
T  22371055 agtcacatgacaacaactttaccagttg 22371028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 23145736 - 23145857
Alignment:
Q  114 gggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttca 213  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||| ||||  || |||||||||||||||| |||||    
T  23145736 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T
Q  214 gtcacatgacaacaactttacc 235  Q
    |||||   ||||||||||||||    
T  23145836 gtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 23557526 - 23557647
Alignment:
Q  114 gggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttca 213  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||| ||||  || |||||||||||||||| |||||    
T  23557526 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T
Q  214 gtcacatgacaacaactttacc 235  Q
    |||||   ||||||||||||||    
T  23557626 gtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 244
Target Start/End: Original strand, 19977726 - 19977882
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||||||||||||| ||||||||  | ||| |||||| || ||||| ||||||||||||||||||||  |||| ||| ||||||||| |||||  ||||     
T  19977726 ggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgttt 19977825  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||||||||||||| |||| |||||||||||||||||| ||||||| ||||    
T  19977826 ccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgcc 19977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 21377085 - 21377232
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    |||||||| |||||| || |||||| ||||| |||||| |||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||  ||||    
T  21377085 cggtgcac-aaagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtt 21377183  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
     | | ||||||||| ||| || |||||||||||||||||||||||||||    
T  21377184 tctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 24859998 - 24860154
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||||||||| ||||||||| |||||||| ||| |||| | | ||||||||||||||||||||| | |||| || ||||||||| |||| ||||    
T  24859998 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcag-cctaccatg-tttttacaccagaggttgt 24860095  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    | ||||| ||| ||||||| || || ||||||||||||||||| |||||||||||||||    
T  24860096 ttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgcc 24860154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 5841154 - 5841006
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||| ||||||| |  ||||||||||| |||||||| ||||  || |||||||||||||  |||||||| |||||||||||| ||  ||    
T  5841154 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctg 5841055  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    || | |||||||||||||||||| || ||||||||||||||||||||||    
T  5841054 tttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 7214664 - 7214505
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttg--gtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||| ||||||||||| ||  |||||||| || ||||| ||| || || || |||||   ||||||||||||||| |||||||||| |||||||||||||    
T  7214664 aacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagag 7214565  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
      |||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  7214564 actgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttg 7214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 17380247 - 17380391
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||| |||||| |||||| || ||||||| |||| |||| |||||||||||||||||| || ||  |||||||||||| | ||||||||| |||    
T  17380247 cccggtgcac-aaagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttat-acacaagaggttg 17380344  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactt 231  Q
    || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  17380345 tttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 40762241 - 40762338
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| || |||||| ||||||| ||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||||||    
T  40762241 aacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacacaagag 40762338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 14544189 - 14544030
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtg--tattgtacgcagtcttaccctgttttt-tacacaagagtttg 184  Q
    |||||||||||||| ||||||||| ||||||| |||| |||||| | |||||  ||  ||||| ||||||||||||||||||||| ||||||||||  ||    
T  14544189 ggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctacacaagaggctg 14544090  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || |||| || || ||| || || |||||||||||||||||||||||||||| |||||||    
T  14544089 tttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgcc 14544030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 235
Target Start/End: Complemental strand, 33795400 - 33795261
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtatt-gtacgcagtcttaccctgttttttacacaagagtttgttgccaggac 194  Q
    |||||| ||||||||  |||||| ||||| |||||||| |||  |||||||| |||||||| ||||||||||||||||| |||||| ||||| || ||||    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccata-ggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggac 33795302  T
Q  195 ttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||||||||| ||||| |||| ||||||||||||||||    
T  33795301 ttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 99281 - 99421
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccag 191  Q
    |||||||||| ||||||||  |||||| | ||| |||| ||| ||||||||||||||||||||| ||| || ||||||||  |||||||  |||| | ||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtttttt--acaagaggctgtttctag 99378  T
Q  192 gacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  99379 gacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 19615116 - 19614981
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcat-ttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    |||||||||||||| | ||||||| ||||| |||||| ||||||  |  | ||||| ||||||||||||||||||||||||||||| |||||||  ||||    
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtccactattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgtt 19615017  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatga 222  Q
     | |||||||||||||||||| ||||||||||||||    
T  19615016 tcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 26684630 - 26684789
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccct-gttttttacacaaga-gttt 183  Q
    |||||||| ||||||| ||||||||| ||||| ||||||  ||||||| ||||| || |||||||||||| |||||| |  |||||||||||||| || |    
T  26684630 ccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtct 26684729  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    |||  |||||||| ||||  |||| ||||| |||||||||||||||||||||||||||||    
T  26684730 gttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgc 26684789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 233
Target Start/End: Original strand, 31158451 - 31158598
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||| ||||||||| ||||||||| |||||| ||||| |||||||| |||||  ||| ||||||| ||| |||||||||||||||||| ||||||  |||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgt 31158550  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    |   | ||||| ||||| |||| |||||||||||||||||||||||||    
T  31158551 tttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 36871619 - 36871509
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| ||| |||||||| |||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||      
T  36871619 aacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttcacacaagaggc 36871522  T
Q  183 tgttgccaggact 195  Q
    |||| ||||||||    
T  36871521 tgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 17705567 - 17705465
Alignment:
Q  139 tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagt 238  Q
    ||||||||||||| ||| ||||| ||||| ||||||||||||   ||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagt 17705468  T
Q  239 tgc 241  Q
    |||    
T  17705467 tgc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 176
Target Start/End: Complemental strand, 25632637 - 25632544
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacaca 176  Q
    ||||||||||||||||||| ||||||||||| ||| |||||| |  ||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  25632637 aacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttttacaca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 29419946 - 29420048
Alignment:
Q  137 tttggtgtattgtacgcag----tcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttt 232  Q
    |||||||||||||||||||     |||||||||||||||||||||||| ||||| ||||||||||||| |||||| |||||||||  |||||||||||||    
T  29419946 tttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaacttt 29420045  T
Q  233 acc 235  Q
    |||    
T  29420046 acc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 25641626 - 25641487
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    ||||| ||||||||||  |||||||| ||| | |||||| ||||||||  |||||||||||||||||||   ||||||||||||  |||||| |   |||    
T  25641626 ccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttc-acacaaaatgctgt 25641528  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaac 226  Q
    | |||||||||||||||||||| ||||||||||||||||||    
T  25641527 ttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 44643649 - 44643497
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagagttt 183  Q
    ||||||||||||| ||| ||||||||| |||||| ||||| |||||||| ||||||||  ||||||||||| ||||| ||||||||| ||  |||||  |    
T  44643649 cccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttttacggaagaggct 44643550  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
     || | || |||||||| |||||| ||||||||||||||  ||||||||||||    
T  44643549 ctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 44521432 - 44521532
Alignment:
Q  135 catttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||||||||||||| || |||| |||||| ||||||||||||||||| ||||| ||| || |||||| |||||| |||||||||| ||| |||||||||||    
T  44521432 catttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaactttac 44521531  T
Q  235 c 235  Q
    |    
T  44521532 c 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 86 - 215
Target Start/End: Complemental strand, 17471675 - 17471544
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctg-ttttttacacaagagttt 183  Q
    ||||||||||||| || ||||||| | |||||| ||||| ||||| |||||||| ||| ||||||||||||||||| |||| |||||||||||||||  |    
T  17471675 ccggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggct 17471576  T
Q  184 gttgccaggacttgaacccgtgacatttcagt 215  Q
    ||| |   |||||||||| |||||||||||||    
T  17471575 gtttctgagacttgaacctgtgacatttcagt 17471544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 44604908 - 44604826
Alignment:
Q  156 tcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagtt 239  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||||| |||||    
T  44604908 tcttaccctgttttt-acacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 234
Target Start/End: Original strand, 45235833 - 45235976
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagagtttgttgcca 190  Q
    |||||||||| | |||||||||||||| || || |||||||| ||||| |||||||  ||| || |||||||| || ||||||| |||||  |||| | |    
T  45235833 cactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttcta 45235932  T
Q  191 ggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    |||||||||| |||||  |||||||||||||| |||||||||||    
T  45235933 ggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 24890533 - 24890451
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt 171  Q
    ||||||||||||| | ||||||| |||||||||||| |||||||| || ||||||||||||| |||| |||||| ||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 30826158 - 30826068
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||| ||||||| |||||||| ||||| |||| ||| ||||||||||||||||||||  ||||||||  ||||||||||||||    
T  30826158 ggtgcactaaagctcccgcatatgtagggtctgggaa-gggttccaccatttggtgtattgtacgcaaccttaccct-atttttacacaagag 30826068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 226
Target Start/End: Original strand, 31821355 - 31821491
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||||| ||||||| ||||||||  ||| | ||| || |||||||||||||||||||||||||| ||  |||||||| |||||||||||   |  ||||     
T  31821355 ggtgcattaaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctattttttacaca--cggctgttt 31821452  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaac 226  Q
    | | ||||||||| |||||| |||||||||||| |||||    
T  31821453 ctacgacttgaactcgtgacctttcagtcacataacaac 31821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 4795876 - 4795730
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttg 187  Q
    |||||||||||||| ||||||  | ||||||||||| ||||||| ||||| ||||||||| ||||||||| | | |||||||| || || |||  ||||     
T  4795876 tgcactaaagcttcggcatacacaaggtccgggaaaaggtcccaccattttggtgtattgcacgcagtctaatcttgtttttttacgcatgaggctgttt 4795777  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
     || ||||| |||  ||||| |||||||||| |||||||||||||||    
T  4795776 tcaagacttcaacaagtgacttttcagtcacgtgacaacaactttac 4795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 15296421 - 15296533
Alignment:
Q  91 gcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcc 189  Q
    |||| ||||||||| |||||| |||||||| ||| || |||||  |||| ||| |||||||||||| |||||||||| |||||||||| ||  |||| ||    
T  15296421 gcaccaaagcttccacatacgcagggtccgagaagggatcccactattttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttcc 15296520  T
Q  190 aggacttgaaccc 202  Q
     ||||||||||||    
T  15296521 gggacttgaaccc 15296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 23488611 - 23488535
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgcagtc 157  Q
    |||||||||||||||||||  |||||||| |||||||||||| |||||||| ||  ||| |||||||| ||||||||    
T  23488611 aacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcacgcagtc 23488535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 31525831 - 31525771
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtat 146  Q
    ||||| |||||||||| ||||||| | |||||| || ||||||||||||||||||||||||    
T  31525831 ccggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 2003595 - 2003678
Alignment:
Q  135 catttggtgtattgtacgcagtcttaccctg-ttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtca 217  Q
    |||||| |||||||||||||  ||||||||| |||||||| |||| |  |||| |||||||||| ||||||||| |||||||||    
T  2003595 catttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttcagtca 2003678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 27466263 - 27466298
Alignment:
Q  209 tttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  27466263 tttcagtcacatgacaacaactttaccagttgcgcc 27466298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 222
Target Start/End: Original strand, 44449395 - 44449529
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    |||||| |||| || || || ||| |||||||||||| ||||||||  |||| |||||||||||||||| |||| ||||||||| |  |||||| |||||    
T  44449395 ggtgcattaaaactcccacaaacgcagggtccgggaaggggtcccactattttggtgtattgtacgcagccttatcctgtttttcattcaagaggttgtt 44449494  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatga 222  Q
       |||| |||||| |||||| ||||||| ||||||    
T  44449495 tttagga-ttgaactcgtgacctttcagttacatga 44449529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 124921 - 124963
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaa 125  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  124921 aacccggtgcactaaagctcccgcatacgcagggtccgggaaa 124963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 22371240 - 22371198
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaa 125  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  22371240 aacccggtgcactaaagctcccgcatacgcagggtccgggaaa 22371198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 30864427 - 30864520
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||  ||||||||||||||| |||||  |||||||| ||  | |||||||| |||||||||||  ||||||||  ||||||||||||||    
T  30864427 ccggtgcaccgaagcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccct-atttttacacaagag 30864520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 34766383 - 34766333
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    |||||| |||||||||||| ||||||||| |||||||||||| ||||||||    
T  34766383 aacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtccca 34766333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 40579756 - 40579806
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  40579756 aacccggtgcactaaagctcccgcatactcagggtccgggaaggggtccca 40579806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 39189556 - 39189589
Alignment:
Q  211 tcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||||||||||||||||||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgcc 39189589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 12315712 - 12315748
Alignment:
Q  136 atttggtgtattgtacgcagtcttaccctgtttttta 172  Q
    |||||||||||||||| ||||||||||||||||||||    
T  12315712 atttggtgtattgtacacagtcttaccctgtttttta 12315748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 35017840 - 35017785
Alignment:
Q  189 caggacttgaacccgtgacatttca-gtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  35017840 caggacttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgcc 35017785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 31523358 - 31523296
Alignment:
Q  84 acccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtat 146  Q
    |||| ||||||||||||| ||||||| | |||||  |||||||||| ||| ||||||||||||    
T  31523358 acccagtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatttggtgtat 31523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 34080229 - 34080179
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    |||||||||||||||| || ||||||| | |||||||||||| ||||||||    
T  34080229 aacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtccca 34080179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 39499242 - 39499324
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttt 170  Q
    |||||||||||||| ||||||||| ||| | ||  || || ||||| |||||| ||||||||||||||  ||||||| |||||    
T  39499242 ggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccctattttt 39499324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 41409990 - 41409940
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||||||||| ||||| ||||||| | |||||||||||| ||||||||    
T  41409990 aacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtccca 41409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 4794924 - 4794871
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggt 142  Q
    |||||||| |||| ||||||| | ||| |||||||| |||||||||||||||||    
T  4794924 gtgcactagagctcccgcatatgcaggatccgggaaggggtcccatcatttggt 4794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 34752759 - 34752820
Alignment:
Q  173 cacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    |||||||| ||||| |||| |||||||  |||||| |||||||||||||| ||||| |||||    
T  34752759 cacaagaggttgtttccagaacttgaattcgtgacctttcagtcacatgataacaagtttac 34752820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 4852304 - 4852364
Alignment:
Q  166 ttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaac 226  Q
    |||||| ||||||||  ||||  |||||||||||||| |||| |||| |||||||||||||    
T  4852304 tttttttcacaagagactgtttgcaggacttgaacccctgacttttcggtcacatgacaac 4852364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 8576023 - 8575975
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcc 131  Q
    |||| |||||||||||||| || |||||| |||||||||||| ||||||    
T  8576023 aacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 38879711 - 38879548
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||| |||||||    
T  38879711 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagag 38879612  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38879611 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 38879548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 24449018 - 24448857
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| | ||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||      
T  24449018 aacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggc 24448919  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  24448918 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 24448857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 41014446 - 41014286
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||| |  |||||| |||| |||||||| ||||||||||||||||||||| |||||||||||||| |||||||||      
T  41014446 aacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggc 41014348  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  41014347 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 41014286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 43334332 - 43334169
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgtttttt-acacaaga 179  Q
    ||||||||||||||||||| |||||| || |||||||||||| |||||||| |||||  |||||||||||||||| ||||||||||||||| ||||| ||    
T  43334332 aacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacagga 43334234  T
Q  180 gtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |  |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43334233 ggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 43334169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 4619111 - 4619274
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||||||||  |||||| |  ||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  4619111 aacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 4619210  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      | || |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  4619211 gctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 4619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 8169991 - 8170150
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||| || || ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||| ||      
T  8169991 aacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaaaggc 8170088  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8170089 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgcc 8170150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 27328875 - 27328721
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||| ||||||| ||||||||| ||||| |||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||  ||||     
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgttt 27328776  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  27328775 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgcg 27328721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 32703550 - 32703411
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  32703550 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 32703453  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgaca 224  Q
    |||| |||||||||||||||||||| ||||||||||||||||    
T  32703452 tgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 35710439 - 35710280
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | | | |||||||| |||||||| |||||||||||||| |||||| |||||||| ||||  |||||||||      
T  35710439 aacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctatttt--acacaagaggc 35710342  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  35710341 tgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgcc 35710280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 19142956 - 19143102
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgc 188  Q
    |||||||||| || ||||||||| | |||||||||| |||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||| ||||| |    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctg-tttttacacaagaggttgtttc 19143054  T
Q  189 caggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||||||| ||| ||||| |||||| ||||||||| |||||||    
T  19143055 caggacttgaacctgtggcattttagtcacgtgacaacaattttacca 19143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 1565559 - 1565398
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagagt 181  Q
    ||||||||||||||| ||| || |||| | |||||||||||| |||||||  ||||||||| ||||||||||| ||||   |||||||| || ||||||     
T  1565559 aacccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagccttaatatgtttttttactcaagagg 1565461  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  1565460 ttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgcc 1565398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 43574732 - 43574610
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||| |||||||| ||||||||| |||||||||||| |||||||| |||||||| |||||||||||| ||||||||||||| |||||||||| |||    
T  43574732 cccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattg 43574633  T
Q  185 ttgccaggacttgaacccgtgac 207  Q
    || ||||||||||||| ||||||    
T  43574632 tttccaggacttgaacacgtgac 43574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 22600569 - 22600426
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| ||||||||| ||| |||||||| || ||||| ||||||||||||||||| ||| |||||||||| |||||||||| |  ||||| ||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggact 22600470  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaactttaccagtt 239  Q
    ||||||||| || || ||||||||||| ||||||||||||||||    
T  22600469 tgaacccgtaaccttccagtcacatgataacaactttaccagtt 22600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 39301249 - 39301091
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||||||||||| || || |||||| |||||||||||| |||||||| | ||| |||| ||| ||||||  ||||||||||||| |||||||||| ||    
T  39301249 cccggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggtt 39301151  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||| ||| |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  39301150 gttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgcc 39301091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 208936 - 209086
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||||||||||||||   ||||||  ||||||| |||| |||||||| ||||| ||||||||| | |||| ||||||||||||| |||||||||| ||    
T  208936 cccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttt-tacacaagaggtt 209034  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||||||||||||||  ||||| ||| |||||||||||||||||||||||    
T  209035 gttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 1850764 - 1850624
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    ||||||||||||||||||||||| || ||||||| ||||  ||||||| |||||| |||||||||||||  ||||  |||||||| ||||||||| || |    
T  1850764 ccggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgttttt-acacaagaggttat 1850666  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaaca 227  Q
    | || ||||||||||||||||| |||||||||||||||||||    
T  1850665 ttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 12006339 - 12006498
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||| ||||||| | |||||| ||||| |||||||| ||||  |||||||||||| | || |||||||| ||||||||| ||||| |||    
T  12006339 cggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttacataagaggttg 12006438  T
Q  185 ttgccaggacttgaaccc-gtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || |||| |||||||||| ||||| ||||||||||||||||||||||| | ||||||||||    
T  12006439 tttccag-acttgaaccccgtgacctttcagtcacatgacaacaacttgagcagttgcgcc 12006498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 244
Target Start/End: Complemental strand, 22187408 - 22187252
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    |||||||||||| | ||||| |||||||  ||||| ||||| |||  |||  ||||||||||||||||||||| | |||||||||||||||||  ||||     
T  22187408 tgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgttt 22187309  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  22187308 ccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgcc 22187252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 30006453 - 30006292
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| |||||||| ||||  ||||||| |||||||| ||||| ||||| ||||| ||| ||||||||||| |||| | ||||| |    
T  30006453 aacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataagaggt 30006354  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||  | ||||||||| |  |||| |||||||||||||||||||| |||| ||||||||||    
T  30006353 tgttttccggacttgaatctatgacctttcagtcacatgacaacaaatttatcagttgcgcc 30006292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 1405312 - 1405170
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||| |||| |||| ||||||| | ||||| | ||||||||||||| ||||||||||||||||||||  ||||| || ||||||| | ||||| ||||    
T  1405312 ccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgt 1405213  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaa 228  Q
    | |||||||||||||||||||| ||  ||||||||||||||||    
T  1405212 ttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 16880654 - 16880751
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| | ||||||||||  |||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16880654 aacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacacaagag 16880751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 235
Target Start/End: Original strand, 28516440 - 28516593
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttgg-tgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    |||| ||| |||||||||| | |||| || |||||| ||||| |||||||| ||||| | |||||||||||||| | || |||||||||||||||||||     
T  28516440 aacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagagg 28516539  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
     |||| ||| |||||||||||||||| |||||| ||| ||||||||||||||||    
T  28516540 atgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 37024626 - 37024719
Alignment:
Q  146 ttgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||||||||| |||||||||||||  |||||||||  |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 37024719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 42924840 - 42924977
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggt--ccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    |||||||||||||||||||||||||| |||||  | ||||| || | |||||||||  |||||||||||||||  |||||||||||||||||||||||      
T  42924840 ccggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttacacaagatg 42924939  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcaca 219  Q
    |||||  |||||||||||| |||||| |||||||||||    
T  42924940 ttgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 13801774 - 13801895
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||||||||  |||||| |  ||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  13801774 aacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 13801873  T
Q  181 tttgttgccaggacttgaaccc 202  Q
      || | |||||||||||||||    
T  13801874 gctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 23974840 - 23974748
Alignment:
Q  151 cgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgcc 23974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 244
Target Start/End: Complemental strand, 2838886 - 2838745
Alignment:
Q  103 ccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaaccc 202  Q
    ||||||||| |||||||| ||| || ||||| ||||||||||||||||||||| |||||||||| ||||||||||||   |||| |   ||||||| | |    
T  2838886 ccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagatgctgtttctgagacttgacctc 2838788  T
Q  203 gtgacattt-cagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||    
T  2838787 gtgacctttacagtcacatgacaacaactttaccggttgcgcc 2838745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 22861680 - 22861830
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    |||||||||| |||| ||||||| | ||||| || ||| |||||||| |||||| ||||||||  ||||||||||    | |||||||||||||  || |    
T  22861680 cggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgtgagcagtcttact---tgttttacacaagagactgct 22861776  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttg 240  Q
     | |||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  22861777 tctaggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttg 22861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 7368524 - 7368413
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| || |||| | |||||||||||| |||||||| || |||||||||||||||||| |||||||||  |||||||||||||      
T  7368524 aacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg--ttttacacaagaggc 7368427  T
Q  183 tgttgccaggactt 196  Q
    |||| |||||||||    
T  7368426 tgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 34154821 - 34154903
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg 165  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  34154821 aacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 24323725 - 24323862
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| |||||||   |||||| ||||| ||||||||  |||||| ||||| ||||||  |||||||||| ||||||||||||| ||||| |||| |||    
T  24323725 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaact 24323824  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    |||||   |||||||||||||||| || ||||||||||    
T  24323825 tgaacatttgacatttcagtcacacgataacaacttta 24323862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 24360349 - 24360486
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| |||||||   |||||| ||||| ||||||||  |||||| ||||| ||||||  |||||||||| ||||||||||||| ||||| |||| |||    
T  24360349 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaact 24360448  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    |||||   |||||||||||||||| || ||||||||||    
T  24360449 tgaacatttgacatttcagtcacacgataacaacttta 24360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 7097772 - 7097863
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||| ||||||||| ||||| |||||| ||||| || ||||||||||||||||||||  ||||||||| ||||||||||||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctg-tttttacacaagag 7097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 16957442 - 16957374
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtac 151  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  16957442 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 29334522 - 29334426
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt-tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||| ||||| | || |||||| |||||||||||| |||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||    
T  29334522 cccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacacaagag 29334426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 41426039 - 41425948
Alignment:
Q  120 gggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacattt 211  Q
    ||||| |||||||| || ||||||||||||| |||| ||||||||||||||||||||| |  ||||| |||| |||||||||||||||||||    
T  41426039 gggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgacattt 41425948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 20135734 - 20135635
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||| ||||| | ||||| |  ||||||||||| |||||||| ||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  20135734 aacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaagag 20135635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 24903705 - 24903855
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||| |||| | |||| || | || ||||||||| ||||| || || |||||| ||||||| || ||||||||| |||||||||||| ||  ||    
T  24903705 cccggtgcaccaaagttcccgcgtatgcagtgtccgggaaggggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctg 24903804  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||  |||||||||  ||| |||| |||||||||| ||||||||| ||||||    
T  24903805 ttttcaggacttgtgcccatgacttttcagtcacgtgacaacaaatttacc 24903855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 3771465 - 3771379
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt 171  Q
    ||||||||||||||||| || |||||  || ||||||||| |||||||| || |||||||||||| | ||| |||||||||||||||    
T  3771465 cccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttttt 3771379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 4810094 - 4809986
Alignment:
Q  126 gggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    ||||||||||||||| | ||||||| ||||||||| ||| ||||| ||||||||| ||||| | |||||||||| || |||  ||| | |||  ||||||    
T  4810094 gggtcccatcatttgatctattgtatgcagtcttaacctatttttgacacaagagattgtttcaaggacttgaatccatgatcttttactcatgtgacaa 4809995  T
Q  226 caactttac 234  Q
    |||||||||    
T  4809994 caactttac 4809986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 22907915 - 22908014
Alignment:
Q  126 gggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    |||||||| |||||||||||||||| |||  ||||| ||||||| ||||||||||  |||| |  |||||||||||| |||| |||||||||||| ||||    
T  22907915 gggtcccaccatttggtgtattgtatgcaaccttactctgtttt-tacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaa 22908013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 31299705 - 31299602
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    |||| ||||||||||||||| |||| |||||||  | |||||||  |||| | |||||||||||  ||||| | | ||||||||||||||||||||||||    
T  31299705 tttgatgtattgtacgcagttttacactgtttta-atacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttacca 31299607  T
Q  237 gttgc 241  Q
    |||||    
T  31299606 gttgc 31299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 34074621 - 34074717
Alignment:
Q  135 catttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactt 231  Q
    |||||||||||||| |||||  |||||  |||||||||||||||||  |||| | |||||||||||  ||||| |||||||||  ||||||||||||    
T  34074621 catttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 9794388 - 9794471
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    |||||||||||||||||| ||||| |  ||||| | ||| || |||||  ||||||||||||||| ||||||||||||||||||    
T  9794388 ccggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 10634227 - 10634313
Alignment:
Q  157 cttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||||||| ||||| |||| ||| ||||| | ||||||||||||| |||| |||||||||| |||||||||||| ||| ||||||||    
T  10634227 cttaccctgatttttgcacacgaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttgcgcc 10634313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 22025597 - 22025538
Alignment:
Q  157 cttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtc 216  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||| |||| ||||||||    
T  22025597 cttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 22025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 234
Target Start/End: Original strand, 31694120 - 31694266
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||||| || ||||||||| | |||| ||||| | ||||||||| | ||||||||||| ||||  ||| ||| |||||||||| || |  | ||     
T  31694120 ggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctattttttacacgagtgacttttt 31694219  T
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
     || ||||||||||  |||| | |||||||| |||||||||||||||    
T  31694220 tcaagacttgaacctatgacctatcagtcacgtgacaacaactttac 31694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 39801644 - 39801594
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||||||||||||||| |||||||||||||||| ||||| ||||||||    
T  39801644 aacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtccca 39801594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 25622585 - 25622533
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt 138  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||| ||||    
T  25622585 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 39079882 - 39079933
Alignment:
Q  192 gacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgcc 39079933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 13774991 - 13774920
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagt 156  Q
    ||||||||||||||||| ||||||||| ||||||||| || || |||   ||||||||||||||| ||||||    
T  13774991 cccggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattgtgcgcagt 13774920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 18426160 - 18426017
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcc 189  Q
    ||||||||||||  |||||||| || || ||  || ||||| || |||| | |||||||||| ||  ||| | || ||||||||||||||| |||||  |    
T  18426160 tgcactaaagctctcgcatacgcagagttcgaaaaggggtctcaccattcgatgtattgtacacaacctttctctattttttacacaagagattgttttc 18426061  T
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    | ||||| |||| |||||||||||||||| | | ||||||||||    
T  18426060 aagacttaaacctgtgacatttcagtcacgtaataacaacttta 18426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 12575669 - 12575739
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgca 154  Q
    |||||||||| |||||| | ||||||| ||||||| |||| |||||||| ||||| |||||||||||||||    
T  12575669 cccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgca 12575739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 17419942 - 17419881
Alignment:
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||||||||||| ||| || |||||||||||| ||||||| |||||||||| ||||    
T  17419942 tgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagttacgcc 17419881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 5873331 - 5873425
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||| |||||||||||| ||||||||| || ||||||| | | |||||| || |||||||| |||||  || ||||||||  ||||||||||||||    
T  5873331 cccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccct-atttttacacaagag 5873425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 10306493 - 10306548
Alignment:
Q  95 taaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgt 149  Q
    ||||||| ||||||||| |||||||||||| |||||||| || |||||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 233
Target Start/End: Original strand, 24313581 - 24313732
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggt-ccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagt- 181  Q
    ||||||||||||||||| | ||||||  | ||  ||||||| |||||||| ||||| ||||||||| |||||  |||| | |||||| |||| ||| |      
T  24313581 cccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaaggggg 24313680  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||||| ||| ||||||||| | |||| |||||||||  ||||||||||||||    
T  24313681 ttgtttccaagacttgaacacatgacctttcagtcatgtgacaacaacttta 24313732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 233
Target Start/End: Original strand, 24355918 - 24356069
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggt-ccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagt- 181  Q
    ||||||||||||||||| | ||||||  | ||  ||||||| |||||||| ||||| ||||||||| |||||  |||| | |||||| |||| ||| |      
T  24355918 cccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaaggggg 24356017  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||||| ||| ||||||||| | |||| |||||||||  ||||||||||||||    
T  24356018 ttgtttccaagacttgaacacatgacctttcagtcatgtgacaacaacttta 24356069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 16028631 - 16028681
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    |||||||||||||| |||| ||||||| | |||||||||||| ||||||||    
T  16028631 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccca 16028681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 10943854 - 10943914
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtat 146  Q
    ||||||||||||||||| ||||||  | |||||||||||| ||||||| | |||||||||||    
T  10943854 cccggtgcactaaagctcccgcatt-gcagggtccgggaaggggtcccgttatttggtgtat 10943914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 12477132 - 12477205
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtctta 160  Q
    ||||||||||||||   ||||||| ||  |||||||| |||||||| || ||||||||||||||||||| ||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  195 ttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||||||| || || ||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 32354255 - 32354214
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaa 124  Q
    ||||||||||||||||||| ||||||||  ||||||||||||    
T  32354255 aacccggtgcactaaagctcccgcatacacagggtccgggaa 32354214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 21784343 - 21784395
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt 139  Q
    |||||||||||| || ||||||||| ||||||||| || |||||||| |||||    
T  21784343 cggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccattt 21784395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 20225110 - 20224951
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||  ||||||||| |    
T  20225110 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggt 20225013  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  20225012 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 20224951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 5648386 - 5648226
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| ||||||| ||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||      
T  5648386 aacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggc 5648288  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  5648287 tgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 5648226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 6430633 - 6430793
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||| |||||||| ||||||||| ||||||||||||  ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||      
T  6430633 aacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggc 6430731  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6430732 tgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 6430793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 16408608 - 16408771
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| |||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  16408608 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagag 16408707  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  16408708 gctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcc 16408771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 30639507 - 30639347
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| ||||||||||||| ||||||| | |||||||||||| ||||| || ||||||||||||||||||||| |||||||||||||| ||||||||||     
T  30639507 aacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttt-acacaagagtc 30639409  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  30639408 tgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgcc 30639347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 11054155 - 11054314
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||  |||||||||      
T  11054155 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgtttt--acacaagagac 11054252  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11054253 tgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 48598832 - 48598991
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| | ||||| | | |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||  |||||||||      
T  48598832 aacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggc 48598929  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48598930 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 48598991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 83 - 241
Target Start/End: Original strand, 47528537 - 47528693
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| || ||||   |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||  |||||||||      
T  47528537 aacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggc 47528634  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  47528635 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 47528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 23501917 - 23501760
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcat--ttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| | |||||||||||| |||||||| |||  |||||||||||||||||  ||||||||||||||||||||||||    
T  23501917 aacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagag 23501818  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||      |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23501817 gctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgcc 23501760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 5306667 - 5306831
Alignment:
Q  83 aacccggtgcactaaagcttccg----catacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaag 178  Q
    ||||||||||| ||||||| |||    |||||| |||||||||||| |||||||| ||||||||||||||||||||  ||||||||| |||| |||||||    
T  5306667 aacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgatttt-acacaag 5306765  T
Q  179 agtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||  |||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  5306766 aggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgcc 5306831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 16911692 - 16911529
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||  ||||||||| |||| |||| |||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||| ||| ||||||||||    
T  16911692 aacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagag 16911593  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| | |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  16911592 gctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgcc 16911529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 21647094 - 21646931
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |  ||||| ||||| |||||||| ||||  |||| |||||||||||| |||||||| |||||||||||||||    
T  21647094 aacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagag 21646995  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  21646994 gctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgcc 21646931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 40915953 - 40915802
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||| ||||| ||||||||| |||||||||||| || ||||| ||||||||||||||||||||| |||||| || ||||||||||||||  |||    
T  40915953 ccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttg-tttttacacaagaggctgt 40915855  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagt 238  Q
    | |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  40915854 ttccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 19027973 - 19027823
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    |||||||||||||||| || |||||| || ||| || || |||||||| || |||||||||||||||||| |||||||||||||||||||||||  ||||    
T  19027973 ccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgt 19027874  T
Q  186 tgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    | |||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  19027873 ttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 238
Target Start/End: Original strand, 44363137 - 44363294
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||  ||||  |||||||||| | |||||||||||||||||| |||    
T  44363137 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacacgag 44363236  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagt 238  Q
      ||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  44363237 gctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 37494972 - 37494821
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcc 189  Q
    |||||||||||| | ||||||| ||||||| | || |||||||| |||||||| ||||||| |||  |||||||||||||||||||||||| ||||| ||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttcc 37494873  T
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    |||||||||||| ||||| |||||||| |||| |||||||||||||||||||    
T  37494872 aggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgc 37494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 35567296 - 35567146
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| |||||||| |||||||||| |||||| ||| |||||||||||||||||||||| |  ||    
T  35567296 cccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctg 35567197  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    || ||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  35567196 tttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 25463237 - 25463108
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| ||||||| | |||||||||||| |||||||| |||||||||| |||||||||  ||| ||| |||||||||||||||| ||||| ||||||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggact 25463138  T
Q  196 tgaacccgtgacatttcagtcacatgacaa 225  Q
    |||||||||||| |||||||||||||||||    
T  25463137 tgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 54175191 - 54175043
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaaggg-tcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||| ||||||| | |||||||||| ||||| ||||| ||||| |||||||||||||||| |||||||||||||| |||||||||      
T  54175191 cccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttt-acacaagaggc 54175093  T
Q  183 tgttg-ccaggacttgaacccgtgacatttcagtcacatgacaacaactt 231  Q
    ||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  54175092 tgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 95 - 231
Target Start/End: Original strand, 17043413 - 17043549
Alignment:
Q  95 taaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggac 194  Q
    ||||||| | ||||| | |||||| ||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||  |||| |||||||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggac 17043512  T
Q  195 ttgaacccgtgacatttcagtcacatgacaacaactt 231  Q
    ||||||| ||||| |||||||||| ||||||||||||    
T  17043513 ttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 47444085 - 47443928
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| ||||||| ||||| | ||||| | |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||      
T  47444085 aacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggc 47443986  T
Q  183 tgttgccaggacttgaacccgtgacatt----tcagtcacatgacaacaactttacca 236  Q
    |||| |||||||||||||||||||| ||    || ||||||||| |||||||||||||    
T  47443985 tgtttccaggacttgaacccgtgacctttcggtcggtcacatgagaacaactttacca 47443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 54967145 - 54966989
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||| |||||| ||||||| ||||||| |||||| |||||||| |||||||| ||||||| |||  |||||||||||||||||||||||| ||     
T  54967145 cccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttc 54967048  T
Q  185 ttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    || |||| ||||||||  ||||| ||||||||||||||||||||||||||| ||||||||    
T  54967047 tttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgcc 54966989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 29207905 - 29208039
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  29207905 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 29208002  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcaca 219  Q
      || |||||||||||||||||||| |||||||||||    
T  29208003 aatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 244
Target Start/End: Complemental strand, 54730376 - 54730216
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgtttttt-acacaagagttt 183  Q
    ||||||||||||||| ||||||||| |||||||||||| |||| ||||||||  ||||||||| ||||||| |||| ||| |||||| |||||||||  |    
T  54730376 cggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggct 54730277  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||| | |||||||||||||||||| |||  ||||||||||||||||||||||  |||||||    
T  54730276 gtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgcc 54730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 20639665 - 20639777
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||     
T  20639665 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaagagg 20639764  T
Q  182 ttgttgccaggac 194  Q
     |||| |||||||    
T  20639765 ctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 83 - 233
Target Start/End: Original strand, 9832320 - 9832468
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| || | | ||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  9832320 aacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 9832417  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||||  ||||||||||||||||||| ||||||||| || ||||||| ||||    
T  9832418 tgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 239
Target Start/End: Complemental strand, 14983953 - 14983806
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccag 191  Q
    |||||||||| ||||||||| |||||||||||| |||||||| ||||| |||||||||| |||  |||||||| |||||||||||||||  |||| | |     
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaa 14983854  T
Q  192 gacttgaacccgtgacatttcagtcacatgacaacaactttaccagtt 239  Q
    |||||||| ||||||| || || ||| |||||||||||||||||||||    
T  14983853 gacttgaatccgtgaccttccaatcatatgacaacaactttaccagtt 14983806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 233
Target Start/End: Original strand, 30690188 - 30690340
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctg-------ttttttacacaagag 180  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||| || ||||||||||||| |||| |||||||||       |||||||||||||||    
T  30690188 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttattttttacacaagag 30690287  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
      | || |||||||||||||||||||| |||||||||| ||||||| ||||||    
T  30690288 gctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 7385503 - 7385628
Alignment:
Q  103 ccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaaccc 202  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||| || ||  |||||||| ||||||||||| |||  |||| ||||| |||||||||    
T  7385503 ccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaaccc 7385602  T
Q  203 gtgacatttcagtcacatgacaacaa 228  Q
    ||||| ||||||||||||||||||||    
T  7385603 gtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 25629177 - 25629080
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  25629177 aacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacacaagag 25629080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 241
Target Start/End: Original strand, 13256406 - 13256562
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||| | |  |||| |||||| ||||||||  |||  ||||||||||||||||| ||||||||||||||||||||||||    
T  13256406 aacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaagag 13256505  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
      |    ||||||||||||||  |||| || ||||||||||||||||||||||||||||||    
T  13256506 gct----ccaggacttgaacctatgaccttccagtcacatgacaacaactttaccagttgc 13256562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 14590922 - 14590804
Alignment:
Q  127 ggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    ||||||| |||||| ||||||||| |||| ||||||||||||||| | |||||||  |||| | |||||||||| ||||||| |||||||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaa 14590823  T
Q  226 caactttaccagttgcgcc 244  Q
    |||||||||||||||||||    
T  14590822 caactttaccagttgcgcc 14590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 8473627 - 8473788
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtaggg-tccgggaaaggg-tcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||||||| ||||||| | |||| |||||| ||||| ||||| |||||||||||||||| |||| |||||||||||    |||||||||    
T  8473627 aacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctgttaa--acacaagag 8473724  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      |||| ||||||||||||||||  || || | |||| ||||||||||||||||||||||||||    
T  8473725 gctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaactttaccagttgcgcc 8473788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 30352591 - 30352759
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagt----cttaccctgtttt-----ttacac 175  Q
    ||||||||||||||| ||||||||| |||||||| ||| |||||||| |||||  ||||||||||||||||     |||||||||||||     ||||||    
T  30352591 cggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgtttttttttttacac 30352690  T
Q  176 aagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||  |||| ||||||||  |||||||||| |||| ||||| |||||||||||||||||||||||||    
T  30352691 aagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgcc 30352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 39077803 - 39077948
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | ||||||||| ||   ||| || |||||||| |||||||||||  |||||||||||||  |||||||||      
T  39077803 aacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgtttt--acacaagaggc 39077900  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaact 230  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  39077901 tgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 47441567 - 47441697
Alignment:
Q  113 agggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttc 212  Q
    |||||||||||| |||||| | ||||||||||||||||| ||| ||||||||| |||||||| |||||  |||| |  ||||||||||| ||||| ||||    
T  47441567 agggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttc 47441666  T
Q  213 agtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||| |||||||||||||||| ||||||||    
T  47441667 agtcacgtgacaacaactttacc-gttgcgcc 47441697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 487200 - 487294
Alignment:
Q  141 gtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||||||||||||||  ||||| |||||| |||||||||| ||||| ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  487200 gtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 10660477 - 10660371
Alignment:
Q  138 ttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccag 237  Q
    ||||||||||||| |||| | |||||| ||||||||| ||||| ||||| |||||||||||||  || || |||||||||||||||||||||||||||||    
T  10660477 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccag 10660378  T
Q  238 ttgcgcc 244  Q
    |||||||    
T  10660377 ttgcgcc 10660371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 10874622 - 10874516
Alignment:
Q  138 ttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccag 237  Q
    ||||||||||||| |||| | |||||| ||||||||| ||||| ||||| |||||||||||||  || || |||||||||||||||||||||||||||||    
T  10874622 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccag 10874523  T
Q  238 ttgcgcc 244  Q
    |||||||    
T  10874522 ttgcgcc 10874516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 51865048 - 51865142
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||| ||||||| ||||||||| |||||||||||| ||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  51865048 ccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaagag 51865142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 32478800 - 32478942
Alignment:
Q  84 acccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    ||||||||||| |||||| |||||||||  ||||||||||| |||||||| |||||||||||||     ||| |||||||||||||| |||| |||| ||    
T  32478800 acccggtgcac-aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctgttttt-acactagaggtt 32478892  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||| |||||||||||||| ||||| | || ||||||||||||||||||||    
T  32478893 gtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 20908649 - 20908797
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||||| || ||||||||||||||||||| |||||| | ||||||| | ||||   ||||     
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgttt 20908748  T
Q  188 ccaggacttgaacccgtgaca-tttcagtcacatgacaacaactttacc 235  Q
    ||| |||||||||  || ||| |||||||||||||||||||||||||||    
T  20908749 ccatgacttgaacatgtaacattttcagtcacatgacaacaactttacc 20908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 25343261 - 25343162
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  | || |||| ||||||||| ||||| | |||||||| |||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 41018807 - 41018945
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgc 188  Q
    ||||||||||||  |  |||||| | |||| ||||| ||||||||  ||||||||||||||||| || ||||||||  |||| ||||||||| ||||| |    
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaatttt-acacaagaggttgtttc 41018905  T
Q  189 caggacttgaacccgtgacatttcagtcacatgacaacaa 228  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  41018906 caggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 21489216 - 21489099
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    ||||| |||||| |||||| ||||||||| ||||| |||||| |||||||| ||||| |||| ||||||||||||||||| ||||||||||| ||||||     
T  21489216 aacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagagg 21489117  T
Q  182 ttgttgccaggacttgaa 199  Q
     |||| ||||||||||||    
T  21489116 ctgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 234
Target Start/End: Original strand, 3580860 - 3580994
Alignment:
Q  96 aaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggact 195  Q
    |||||| || |||| | |||||||||||| |||||| | |||||||||||||| || ||| |||||| || ||||||||||||||   ||| ||| ||||    
T  3580860 aaagctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagccttaccatggtttttacacaagag---gtttcca-gact 3580955  T
Q  196 tgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  3580956 tgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 48327770 - 48327869
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||||||||||||| |||||||||| || |||| ||||||  ||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||    
T  48327770 aacccggtgcactaaaacttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgttttttacacaagag 48327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 9987843 - 9987957
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    ||||||||| ||||||| ||||||| | | ||||  |||| |||||||| |||||||||||||||| |||| |||||||| || |||||||||||| |||    
T  9987843 cccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttg 9987942  T
Q  185 ttgccaggacttgaa 199  Q
    || ||||||||||||    
T  9987943 tttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 20405210 - 20405062
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgtt-ttttacacaagagtttgtt 186  Q
    |||||||||||| ||||||| |  ||||||||||| |||||||| ||||  | |||||||||||||| |||||||||||| |||||||||||||  ||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtt 20405111  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
     | |||       |||||||| || |||||||||||||||||||||||||||||||    
T  20405110 tctagg-------cccgtgaccttccagtcacatgacaacaactttaccagttgcg 20405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 30496333 - 30496488
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgtt 186  Q
    ||||||||||||||| |  |||| | | |||||||||| | |||||  |||||||||||||||| |||| |||||||   | ||||||||||||  ||||    
T  30496333 cggtgcactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttacccg--tgtttacacaagaggctgtt 30496430  T
Q  187 gccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
     ||| ||||||||| |||||| |||||||||| |||||||||||||  ||||||||||    
T  30496431 tccatgacttgaacacgtgacctttcagtcacgtgacaacaacttttacagttgcgcc 30496488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 235
Target Start/End: Original strand, 39029078 - 39029220
Alignment:
Q  94 ctaaagcttccgcatacgtagggtccgggaaagggtcccatcatttg-gtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccagg 192  Q
    |||||||| ||||||| | ||||||||| ||  ||||||| |||||  ||||||||||| ||| ||||||||||||||||||||||||  |||| ||| |    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaag 39029177  T
Q  193 acttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
     ||||||||  |||| ||| ||||||| |||||||||||||||    
T  39029178 gcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 242
Target Start/End: Original strand, 55766475 - 55766632
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttg 184  Q
    |||||||||||||||||  |||||||| | |||||||||  |||| ||| ||||  ||||||||||||||| ||||||||||||   ||||||||   ||    
T  55766475 cccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgtttac-acacaagaaactg 55766573  T
Q  185 ttgccaggacttgaaccc-gtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    || |||  |||||||||| ||||| || | |||||||||||||||||||||||||||||    
T  55766574 tttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgcg 55766632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 7038180 - 7038041
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    ||||| ||||||||||||| ||| ||||| |||||||||| | | | |||| ||||| ||||||||||||| ||||||||||| ||||||||||||||      
T  7038180 aacccagtgcactaaagct-ccgtatacgcagggtccgggtaggtgccccaccattttggtgtattgtacgaagtcttaccctattttttacacaagaag 7038082  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgac 223  Q
     ||||  ||||||||||||| ||||| |||||||||||||||    
T  7038081 ctgtt-tcaggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 17315389 - 17315466
Alignment:
Q  167 tttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||| ||||| | |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  17315389 tttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgcc 17315466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 42164224 - 42164315
Alignment:
Q  151 cgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| ||||||||||||| |||||||||| ||||| ||| |||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  42164224 cgcagccttaccctgtttt-tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgcc 42164315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 233
Target Start/End: Original strand, 23580269 - 23580365
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||  | || | || ||||||||||||||| |||||||||| ||||||||||||||    
T  23580269 tttggtgtatcctacgcagtcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 7909287 - 7909397
Alignment:
Q  83 aacccggtgcactaaagcttcc-gcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagt 181  Q
    |||||| |||||||||||| || ||||||| ||||| |||||| |||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||     
T  7909287 aacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-tttttacacaagaga 7909385  T
Q  182 ttgttgccagga 193  Q
     |||| ||||||    
T  7909386 ctgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 233
Target Start/End: Original strand, 30581481 - 30581624
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgtttt-ttacacaagagtttgttgcc 189  Q
    |||||||||| |  |||| | |||||||||||| |||||||| ||||| |||||||||||| ||  ||||||||||||| ||||||||||| ||||| ||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttcc 30581580  T
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    | ||||||||||| |||| ||| ||| |  ||||||||||||||    
T  30581581 acgacttgaacccttgaccttttagtgatgtgacaacaacttta 30581624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 43035307 - 43035224
Alignment:
Q  152 gcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||| |||||| ||||| ||||||||||| ||||| || ||||||||||||||||| |||||||||| ||||||||||||||||    
T  43035307 gcagccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 232
Target Start/End: Original strand, 49938611 - 49938746
Alignment:
Q  94 ctaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccagg 192  Q
    |||||||| ||||||| | |||||  ||||| |||||||| ||||| |||||||||||| |   ||||||| ||||| ||||||||||  |||| |||||    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttt-tacacaagaggctgtttccagg 49938706  T
Q  193 acttgaacccgtgacatttcagtcacatgacaacaacttt 232  Q
    ||||||||| ||||| |||||||||| |||||||||||||    
T  49938707 acttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 36589870 - 36589712
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagttt 183  Q
    |||||||||| |||||| |||||||| |||||| | |||| |||||||| ||||| |||||| |||   |||  ||||| |||||||||||||||||  |    
T  36589870 cccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccattttggtgtactgtcaacagcattaccatgttttttacacaagaggct 36589771  T
Q  184 gttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||| |||||||||||||| | ||| |||||||||  ||||| |||||||||| ||||||||    
T  36589770 gtttccaggacttgaacctg-gacgtttcagtcatgtgacatcaactttacc-gttgcgcc 36589712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 55830733 - 55830887
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttg 187  Q
    ||||||||||||||  |||||||| | |||||||||  |||| ||| ||||  |||||||||||||||  |||||||| |||  |||||||||  ||||     
T  55830733 ggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctg-tttacacacaagagactgttt 55830831  T
Q  188 ccaggacttgaac-ccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |||  |||||||| ||||||| || |  ||||||||||||||||||||||||||||    
T  55830832 ccaaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcg 55830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 20225204 - 20225119
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcat--ttggtgtattgtacgcagtcttaccctgt 166  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| |||||||| |||  |||||||||||||||||| ||||||||||    
T  20225204 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 12711461 - 12711553
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccct-gttttttacacaaga 179  Q
    |||||||||||| |||||||||||   |||| | ||| |||||||  ||||||||||||||||||||||||||||||  ||||||||||||||    
T  12711461 ggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttttacacaaga 12711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 49796911 - 49796839
Alignment:
Q  97 aagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    ||||| ||||||||| ||||| |||||| |||||||| ||||||||||||||||||||| |||||| ||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgtttt 49796839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 16494345 - 16494259
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatca--tttggtgtattgtacgcagtcttaccctgtttt 169  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||| ||  |||||||||||||| ||||  ||||||||||||    
T  16494345 cccggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 17079691 - 17079777
Alignment:
Q  116 gtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaaccc 202  Q
    |||| ||||||||||||| ||||| | |||||||| |||| ||||||||||||| |||||||||  ||||| ||| |||||||||||    
T  17079691 gtccaggaaagggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaaccc 17079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 51420646 - 51420541
Alignment:
Q  139 tggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaa-cccgtgacatttcagtcacatgacaacaactttaccag 237  Q
    ||||||||||||| ||| ||||||||||||| |||||||||| ||||| ||| |||||||| |   |||| |||||||||| |||||||||||| ||| |    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaatcaactgacctttcagtcacgtgacaacaacttcacc-g 51420548  T
Q  238 ttgcgcc 244  Q
    |||||||    
T  51420547 ttgcgcc 51420541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 44357328 - 44357195
Alignment:
Q  104 cgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaaccc 202  Q
    ||||| ||||||||| |||||  ||||||  ||||| |||||||||||||  ||||||| || ||| |||||||| || ||||| | ||||||||||| |    
T  44357328 cgcatgcgtagggtctgggaagaggtcccgccattttggtgtattgtacgtcgtcttactctatttattacacaaaaggttgtttctaggacttgaactc 44357229  T
Q  203 gtgacatttcagtcacatgacaacaactttacca 236  Q
     |||| ||||||| |||| |||| ||||||||||    
T  44357228 atgacctttcagttacataacaataactttacca 44357195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 38786737 - 38786673
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtatt 147  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| |||||||||||||    
T  38786737 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 5313107 - 5313162
Alignment:
Q  189 caggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  5313107 caggaattgaacccgtgacctttcaatcacatgacaacaactttaccagttacgcc 5313162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 11579918 - 11579819
Alignment:
Q  137 tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacca 236  Q
    |||||||||||||| ||||| |||   ||||||||| |||| || ||||| ||| ||||| ||||  || ||||||| ||||||||||||||||||||||    
T  11579918 tttggtgtattgtatgcagttttatattgttttttatacaatagattgtttccaagacttaaacctatgccatttcaatcacatgacaacaactttacca 11579819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 32629285 - 32629418
Alignment:
Q  92 cactaaagcttccgcatacgtagggtccgggaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcca 190  Q
    ||||||| || || |||||| | |||||||||| |||||||  || |||||||||| ||| || | |||||||||||||||  |||||||  |||| | |    
T  32629285 cactaaaactcccacatacgcaaggtccgggaaggggtcccgccaatttggtgtat-gtaggcggccttaccctgttttttt-acaagaggctgtttcga 32629382  T
Q  191 ggacttgaacccgtgacatttcagtcacatgacaac 226  Q
    ||| ||||||||||||| ||||||||||||||||||    
T  32629383 ggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 38755915 - 38755970
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt 138  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||    
T  38755915 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 41549425 - 41549358
Alignment:
Q  168 ttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||| |||  || |||||||||||||    
T  41549425 ttttacacaagaggttgtttccagaacttgaacccgtgacatttcaatcatgtgtcaacaactttacc 41549358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 33836494 - 33836563
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcat--ttggtgtattgta 150  Q
    |||||| |||||||||||| ||||||||| |||||||||||| |||||||| |||  |||||||||||||    
T  33836494 aacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 54640429 - 54640506
Alignment:
Q  166 ttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||  |||| ||| |||||||||||||||| |||||| ||| ||||||||| |||||| ||||||||    
T  54640429 ttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgcc 54640506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 2813253 - 2813169
Alignment:
Q  86 ccggtgcact-aaagcttccgcatacgtagggtccgggaaagggtcccatcatt--tggtgtattgtacgcagtcttaccctgtt 167  Q
    |||||||||| |||||| ||||||||| |  || ||||||||||||||| ||||  || ||||||||||||||||||||||||||    
T  2813253 ccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcagtcttaccctgtt 2813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 11394980 - 11394923
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttg 140  Q
    ||||||||||||||||||| ||||||||| ||||||||| || |||||||| ||||||    
T  11394980 aacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 11404707 - 11404650
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttg 140  Q
    ||||||||||||||||||| ||||||||| ||||||||| || |||||||| ||||||    
T  11404707 aacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 40553944 - 40553991
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtc 130  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  40553944 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 40553991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 12047730 - 12047811
Alignment:
Q  88 ggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttt 170  Q
    ||||||||| || | |||||||| ||||||  ||||| |||||| ||||  |||||||||||| |||||||||||||||||||    
T  12047730 ggtgcactataggtcccgcatacatagggtatgggaatgggtcc-atcaactggtgtattgtatgcagtcttaccctgttttt 12047811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 32484361 - 32484311
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||||||||||||||| ||||||| | |||||||||||| ||||||||    
T  32484361 aacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtccca 32484311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 35894502 - 35894613
Alignment:
Q  117 tccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagt 215  Q
    |||||||| |||||||| ||||| |||||||||||||||  |||||| |||||||||||||| |  ||||        ||| |||||| ||| |||||||    
T  35894502 tccgggaaggggtcccaccattttggtgtattgtacgcacacttaccgtgttttttacacaatatattgt--------cttaaacccgcgacttttcagt 35894593  T
Q  216 cacatgacaacaactttacc 235  Q
    |||| |||||||||||||||    
T  35894594 cacaggacaacaactttacc 35894613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 35532120 - 35532079
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaa 124  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  35532120 aacccggtgcactaaagctcccgcatacgcagggtccgggaa 35532079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 10380003 - 10380086
Alignment:
Q  136 atttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacat 220  Q
    ||||||||||||||||||| | ||| ||| |||| |||||||||| |||||   |||||||||||  ||||| ||||||||||||    
T  10380003 atttggtgtattgtacgcaattttatcctatttt-tacacaagaggttgtttgtaggacttgaacaagtgacctttcagtcacat 10380086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 14783834 - 14783746
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaa 177  Q
    |||||||||| |||| ||||||||||| || ||||| || |||||  ||||| ||||||||| ||| | |||  |||||||||||||||    
T  14783834 gtgcactaaaacttctgcatacgtaggatctgggaagggatcccactatttgatgtattgtatgcaattttattctgttttttacacaa 14783746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 36816391 - 36816479
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt-ggtgtattgtacgcagtcttaccctgttttt 170  Q
    |||||||| |||||||||| ||||||||  ||||||| |||| | |||||| | ||| |||||||||||||||| | | ||||||||||    
T  36816391 aacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgcagccctgccctgttttt 36816479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 7227785 - 7227710
Alignment:
Q  158 ttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    ||||||| ||||| ||||||| | ||||| || | | |||||| | |||| |||||||||||||||||||||||||    
T  7227785 ttaccctatttttaacacaagcggttgtttcctgaatttgaactcatgacttttcagtcacatgacaacaacttta 7227710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 25388304 - 25388249
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatt 138  Q
    |||||||||||||||||||   ||||||| |||||||||||| |||||||| ||||    
T  25388304 aacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 10277767 - 10277886
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgt 185  Q
    ||||| ||||| | || ||||||| | |||||| ||||| ||||  || ||||||||||||||||||||| |||| ||  | ||||| |||||||  |||    
T  10277767 ccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcc--tattttatacaagaggctgt 10277864  T
Q  186 tgccaggacttgaacccgtgac 207  Q
    | | |||| |||||||||||||    
T  10277865 ttcaaggatttgaacccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 244
Target Start/End: Complemental strand, 18969738 - 18969708
Alignment:
Q  214 gtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||||||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgcc 18969708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 20373908 - 20373962
Alignment:
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| ||||||  ||||||||||||||| |||| |||||||| ||||||||||||    
T  20373908 aggaattgaacatgtgacatttcagtcatatgagaacaacttgaccagttgcgcc 20373962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 50856350 - 50856403
Alignment:
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||||||||||| ||||| |||  |||||||||||||||| ||||||||    
T  50856350 aggacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgcc 50856403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 12257707 - 12257752
Alignment:
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttacc 235  Q
    |||| ||||||||||||| ||||| |||| ||||||||||||||||    
T  12257707 aggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 47482864 - 47482913
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt 139  Q
    ||||| |||||| ||||||||| |||||||||||| |||||||| |||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 47482913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 19028037 - 19027989
Alignment:
Q  85 cccggtgcactaaagcttccgcatacgtagggtccgggaaagggtccca 133  Q
    ||||||||||||||||| ||||||| || ||||||||||| | ||||||    
T  19028037 cccggtgcactaaagctcccgcataagtggggtccgggaaggagtccca 19027989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 106; Significance: 4e-53; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 46959 - 46798
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||||  |||||||| ||||||||||||||| |    
T  46959 aacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaagaggt 46860  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||| ||||||||||||||| ||  |||||||||||||||||||||||| |||||||    
T  46859 tgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgcc 46798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 24786 - 24935
Alignment:
Q  90 tgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgcc 189  Q
    |||||||||||| ||||||||| ||||| |||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||  ||||       
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt--- 24882  T
Q  190 aggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
      ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  24883 --gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgcc 24935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 43780 - 43699
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaaggg-tcccatcatttggtgtattgtacgcagtcttaccctgtttt 169  Q
    |||||||| |||| ||||||| | |||||||| ||||||| ||||| ||||||||||||||||||||| |||||| ||||||    
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttt 43699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 46995 - 47041
Alignment:
Q  188 ccaggacttgaacccgtgacatttcagtcacatgacaacaactttac 234  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||||    
T  46995 ccaggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 10938 - 10780
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | |||||||||||||||||||||| |    
T  10938 aacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggt 10839  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
    ||||  |||  |||||||||||||| || ||||||||||||||||||||||||||||||    
T  10838 tgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 30705 - 30546
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||  |||||||||      
T  30705 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgtttt--acacaagaggc 30608  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  30607 tgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgcc 30546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 59107 - 58947
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcattt--ggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    |||||| |||||||||||| ||||||||| || ||| ||||| |||||||| |||||  ||||||||||||||||||||||||||||||||| |||||||    
T  59107 aacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagag 59008  T
Q  181 tttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgc 241  Q
      |||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  59007 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgc 58947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 1594 - 1751
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| |||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||| |||| |||| ||||  ||||||||||||| |    
T  1594 aacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctg--ttttacacaagaggt 1691  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    ||||  |||||||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  1692 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttaccaattgcg 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 93; Significance: 2e-45; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 10057 - 10214
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||  |||| | ||||| | |||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||  |||||||||      
T  10057 aacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggc 10154  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10155 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 20385 - 20542
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||  |||| | ||||| | |||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||  |||||||||      
T  20385 aacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggc 20482  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 242  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20483 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 20542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 8964 - 8912
Alignment:
Q  192 gacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgcc 8912  T

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Target: scaffold0187; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 19292 - 19240
Alignment:
Q  192 gacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgcc 19240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 13031 - 13191
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    ||||||||||||||||||  ||||||||| |||||| ||||| |||||||| |||| |||||||||||||||| |||||| || ||||||| ||||||      
T  13031 aacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttg-tttttacgcaagaggc 13129  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  13130 tgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgcc 13191  T

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Target: scaffold0223 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 244
Target Start/End: Complemental strand, 11257 - 11099
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||| ||||||||| |||| ||||||| | |||||||||||| | |||||| |||||||||||||||| |||| ||||  || | |||||||||||||      
T  11257 aacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagcctta--ctttgttttacacaagaggc 11160  T
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    |||| |||||||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  11159 tgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgcc 11099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 4259 - 4125
Alignment:
Q  112 tagggtccgggaaagggtcccatcattt---ggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgaca 208  Q
    ||||||||||||| |||||||| || ||   |||||||||||||||  |||| ||||| ||||||||||||| ||||| ||||||||||||||||||||     
T  4259 tagggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacc 4160  T
Q  209 tttcagtcacatgacaacaactttaccagttgcgc 243  Q
    |||||||||||| ||||||||||||| ||||||||    
T  4159 tttcagtcacataacaacaactttactagttgcgc 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 72874 - 73029
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag-t 181  Q
    |||| |||||||||||||| ||||||||| ||| |||||||| |||| | | |||||||||||||||| |||| |||||| |||||||||||||||||      
T  72874 aacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacacaagagac 72973  T
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| | |||||||||||||||||||       |||||||||||||||||||||||||||||    
T  72974 ttgtttctaggacttgaacccgtgaca-------cacatgacaacaactttaccagttgcgcc 73029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 226456 - 226574
Alignment:
Q  127 ggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt-acacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaa 225  Q
    ||||||| |||||| ||||||||| |||| ||||||||||||||| | |||||||  |||| | |||||||||| ||||||| |||||||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaa 226555  T
Q  226 caactttaccagttgcgcc 244  Q
    |||||||||||||||||||    
T  226556 caactttaccagttgcgcc 226574  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 55896 - 55984
Alignment:
Q  89 gtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaa 177  Q
    |||||||||| |||| ||||||||||| || ||||| || |||||  ||||| ||||||||| ||| | |||  |||||||||||||||    
T  55896 gtgcactaaaacttctgcatacgtaggatctgggaagggatcccactatttgatgtattgtatgcaattttattctgttttttacacaa 55984  T

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Target: scaffold0036 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 35062 - 35184
Alignment:
Q  121 ggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgtttt-ttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcaca 219  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||   |||||||||  ||||  ||||||||||||||||||| || ||||||||    
T  35062 ggaaagggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcaca 35161  T
Q  220 tgacaa-caactttaccagttgc 241  Q
    ||||||  |||||||||||||||    
T  35162 tgacaataaactttaccagttgc 35184  T

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Target: scaffold0015 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 48641 - 48758
Alignment:
Q  83 aacccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtt 182  Q
    |||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||  |||||||||||||      
T  48641 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggc 48738  T
Q  183 tgttgccaggacttgaaccc 202  Q
    |||| |||  ||||||||||    
T  48739 tgtttccaccacttgaaccc 48758  T

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Target: scaffold0954 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 3668 - 3575
Alignment:
Q  87 cggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagag 180  Q
    ||||||||||||||| ||||||||| ||||| |||||| ||||||||||||| |||||||| ||||||| |||||| | | |||||||||||||    
T  3668 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagag 3575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 24143 - 24220
Alignment:
Q  86 ccggtgcactaaagcttccgcatacgtagggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccc 163  Q
    ||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||||||    
T  24143 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 83904 - 83842
Alignment:
Q  182 ttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgcc 244  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  83904 ttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgcc 83842  T

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Target: scaffold0167 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 23695 - 23590
Alignment:
Q  115 ggtccgggaaagggtcccatcatttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcag 214  Q
    |||| ||||| |||||||| |||||| |  ||||||||||| || ||||||||||||||||||||| |||||  || |||||||||||||  | ||||||    
T  23695 ggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttcag 23596  T
Q  215 tcacat 220  Q
    ||||||    
T  23595 tcacat 23590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 8935 - 8865
Alignment:
Q  167 tttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccag 237  Q
    |||||||||||||  ||||| |||||| ||||||| ||||| || ||||||||||||||||||||||||||    
T  8935 tttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttaccag 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 33020 - 32906
Alignment:
Q  122 gaaagggtcccatca-tttggtgtattgtacgcagtcttaccctgttttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacat 220  Q
    |||||||||||| || ||||||||||||||  ||||||||| |||||||||||| ||||| || || |  |||||||||||| |||| ||| |||||| |    
T  33020 gaaagggtcccaccaatttggtgtattgtatacagtcttactctgttttttacagaagaggttttttcgcggacttgaacccatgacctttaagtcacgt 32921  T
Q  221 gacaacaactttacc 235  Q
    | |||||||| ||||    
T  32920 ggcaacaactatacc 32906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 43173 - 43097
Alignment:
Q  167 tttttacacaagagtttgttgccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgc 243  Q
    ||||||||||||||  |||| | ||||| ||||| |||||| ||||| ||||||||||| |||||||||||||||||    
T  43173 tttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgc 43097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 24692 - 24642
Alignment:
Q  183 tgttgccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 233  Q
    |||| |||||||||||||||||||| || ||||||| ||||||||||||||    
T  24692 tgtttccaggacttgaacccgtgaccttacagtcacttgacaacaacttta 24642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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