View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0485-Insertion-1 (Length: 790)

Name: NF0485-Insertion-1
Description: NF0485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0485-Insertion-1
NF0485-Insertion-1
[»] chr5 (48 HSPs)
chr5 (18-502)||(4929753-4930237)
chr5 (503-641)||(14744692-14744830)
chr5 (508-731)||(21977889-21978112)
chr5 (490-744)||(8654095-8654349)
chr5 (529-731)||(21972116-21972317)
chr5 (503-614)||(22870451-22870562)
chr5 (503-580)||(31107931-31108008)
chr5 (503-615)||(20857535-20857647)
chr5 (541-619)||(39402132-39402210)
chr5 (503-660)||(8673701-8673858)
chr5 (503-615)||(20072857-20072969)
chr5 (503-615)||(20856932-20857044)
chr5 (526-606)||(21260888-21260968)
chr5 (526-621)||(14745471-14745566)
chr5 (526-640)||(25253333-25253447)
chr5 (526-640)||(25317124-25317238)
chr5 (502-615)||(20072120-20072233)
chr5 (510-615)||(22869612-22869717)
chr5 (504-621)||(25253087-25253204)
chr5 (504-621)||(25316877-25316994)
chr5 (532-621)||(37945023-37945112)
chr5 (526-621)||(32052490-32052585)
chr5 (526-621)||(33735579-33735674)
chr5 (508-615)||(36476770-36476877)
chr5 (529-615)||(39181784-39181870)
chr5 (503-615)||(39181057-39181169)
chr5 (526-621)||(7015531-7015626)
chr5 (501-640)||(13064656-13064795)
chr5 (508-615)||(36477364-36477471)
chr5 (575-640)||(8323303-8323368)
chr5 (503-580)||(21978994-21979071)
chr5 (526-606)||(22024151-22024231)
chr5 (526-606)||(22533671-22533751)
chr5 (532-640)||(32052253-32052361)
chr5 (532-640)||(33735342-33735450)
chr5 (501-640)||(12991035-12991174)
chr5 (508-615)||(16532898-16533005)
chr5 (532-606)||(8323085-8323159)
chr5 (501-615)||(16533613-16533727)
chr5 (504-606)||(18934714-18934816)
chr5 (586-640)||(20704960-20705014)
chr5 (526-618)||(6421891-6421983)
chr5 (526-606)||(7015790-7015870)
chr5 (746-790)||(14744645-14744689)
chr5 (526-606)||(34404507-34404586)
chr5 (532-618)||(14745582-14745668)
chr5 (540-606)||(27753760-27753826)
chr5 (532-606)||(41339634-41339708)
[»] chr6 (31 HSPs)
chr6 (503-728)||(17784260-17784485)
chr6 (509-595)||(8427373-8427459)
chr6 (503-613)||(33401116-33401226)
chr6 (532-641)||(5064364-5064473)
chr6 (502-619)||(8427199-8427316)
chr6 (502-615)||(33399965-33400078)
chr6 (532-640)||(13480455-13480563)
chr6 (526-621)||(32337833-32337928)
chr6 (532-621)||(23291773-23291862)
chr6 (503-615)||(4116799-4116911)
chr6 (503-615)||(4117535-4117647)
chr6 (503-615)||(14656480-14656592)
chr6 (526-621)||(13480231-13480326)
chr6 (504-606)||(3299840-3299942)
chr6 (526-621)||(5064601-5064696)
chr6 (526-621)||(15819756-15819851)
chr6 (526-641)||(22494126-22494241)
chr6 (502-621)||(23292010-23292129)
chr6 (532-606)||(1066420-1066494)
chr6 (529-615)||(1661418-1661504)
chr6 (537-610)||(20994968-20995041)
chr6 (503-615)||(14657197-14657309)
chr6 (526-610)||(30234869-30234953)
chr6 (526-621)||(737963-738058)
chr6 (526-621)||(3299582-3299677)
chr6 (586-641)||(20561011-20561065)
chr6 (501-640)||(21880362-21880501)
chr6 (526-621)||(32337587-32337682)
chr6 (526-620)||(26503621-26503715)
chr6 (536-606)||(31879490-31879560)
chr6 (565-606)||(31386861-31386902)
[»] chr8 (51 HSPs)
chr8 (503-732)||(38598964-38599193)
chr8 (503-763)||(33497456-33497716)
chr8 (507-728)||(33497020-33497241)
chr8 (503-621)||(25288058-25288176)
chr8 (503-641)||(7393107-7393245)
chr8 (510-763)||(24378837-24379089)
chr8 (502-625)||(24377180-24377303)
chr8 (500-621)||(4970122-4970243)
chr8 (504-651)||(1231527-1231674)
chr8 (502-622)||(27436562-27436682)
chr8 (503-651)||(29574742-29574890)
chr8 (526-606)||(9632351-9632431)
chr8 (503-615)||(34213764-34213876)
chr8 (503-615)||(34665770-34665882)
chr8 (545-640)||(7392250-7392345)
chr8 (526-621)||(40525530-40525625)
chr8 (629-763)||(24377718-24377852)
chr8 (526-640)||(41801839-41801953)
chr8 (502-619)||(27437503-27437620)
chr8 (501-621)||(23424778-23424898)
chr8 (526-621)||(20096043-20096138)
chr8 (503-618)||(36574817-36574932)
chr8 (526-621)||(37343048-37343143)
chr8 (526-621)||(40422183-40422278)
chr8 (503-621)||(4463408-4463526)
chr8 (503-615)||(34214516-34214629)
chr8 (503-606)||(1232796-1232897)
chr8 (526-621)||(20096287-20096385)
chr8 (508-640)||(29575848-29575980)
chr8 (526-606)||(40422441-40422521)
chr8 (526-621)||(547701-547796)
chr8 (526-621)||(27857008-27857103)
chr8 (526-621)||(36623619-36623714)
chr8 (526-621)||(43866734-43866829)
chr8 (555-641)||(11478391-11478477)
chr8 (539-621)||(25287828-25287910)
chr8 (529-583)||(34666560-34666614)
chr8 (525-606)||(15716157-15716238)
chr8 (539-640)||(37342818-37342919)
chr8 (532-621)||(40525773-40525862)
chr8 (526-621)||(7659-7754)
chr8 (526-621)||(11478168-11478263)
chr8 (526-621)||(29190425-29190520)
chr8 (526-621)||(36623375-36623470)
chr8 (526-621)||(41182162-41182257)
chr8 (568-606)||(13566475-13566513)
chr8 (564-606)||(23514082-23514124)
chr8 (586-640)||(29190243-29190297)
chr8 (555-621)||(41767665-41767731)
chr8 (555-621)||(41773596-41773662)
chr8 (586-640)||(43866958-43867012)
[»] chr2 (42 HSPs)
chr2 (503-763)||(20101770-20102029)
chr2 (515-719)||(23206292-23206496)
chr2 (515-719)||(23677896-23678100)
chr2 (503-763)||(20102985-20103244)
chr2 (564-743)||(23183660-23183838)
chr2 (564-743)||(23594917-23595095)
chr2 (503-651)||(24387351-24387499)
chr2 (502-615)||(25624421-25624534)
chr2 (532-619)||(19620777-19620864)
chr2 (501-615)||(25623286-25623400)
chr2 (532-640)||(16366992-16367100)
chr2 (503-603)||(24388256-24388356)
chr2 (525-606)||(9694023-9694104)
chr2 (503-615)||(29957817-29957929)
chr2 (526-641)||(1150183-1150298)
chr2 (503-606)||(20982524-20982627)
chr2 (526-640)||(32519402-32519516)
chr2 (502-615)||(20983249-20983362)
chr2 (526-606)||(28599450-28599530)
chr2 (526-621)||(1149960-1150055)
chr2 (526-621)||(16367229-16367324)
chr2 (526-621)||(20911153-20911248)
chr2 (564-621)||(33882856-33882911)
chr2 (503-603)||(17366626-17366726)
chr2 (526-621)||(32519178-32519273)
chr2 (526-640)||(18476930-18477044)
chr2 (532-622)||(19606946-19607036)
chr2 (526-640)||(37984974-37985088)
chr2 (532-606)||(41846673-41846747)
chr2 (502-583)||(29958567-29958648)
chr2 (508-621)||(33881580-33881693)
chr2 (564-640)||(17366869-17366945)
chr2 (526-610)||(43681879-43681963)
chr2 (527-606)||(5608875-5608954)
chr2 (555-622)||(13646132-13646199)
chr2 (555-622)||(13652074-13652141)
chr2 (503-618)||(43236504-43236619)
chr2 (532-606)||(4375578-4375652)
chr2 (501-603)||(10446830-10446932)
chr2 (532-610)||(41846421-41846499)
chr2 (503-576)||(7983837-7983910)
chr2 (564-605)||(19619587-19619628)
[»] chr3 (38 HSPs)
chr3 (503-731)||(22736562-22736790)
chr3 (529-731)||(44476075-44476277)
chr3 (508-731)||(44481825-44482048)
chr3 (547-731)||(22735403-22735587)
chr3 (503-615)||(32717093-32717205)
chr3 (504-640)||(10998120-10998256)
chr3 (503-615)||(29192035-29192147)
chr3 (526-638)||(55036918-55037030)
chr3 (526-640)||(1741410-1741524)
chr3 (502-615)||(45279272-45279385)
chr3 (503-579)||(29193017-29193093)
chr3 (526-621)||(55036692-55036787)
chr3 (502-615)||(11026620-11026733)
chr3 (503-615)||(2944654-2944766)
chr3 (532-640)||(11312764-11312872)
chr3 (533-621)||(24576561-24576649)
chr3 (525-621)||(40256896-40256992)
chr3 (503-615)||(48189087-48189199)
chr3 (538-621)||(30804114-30804197)
chr3 (508-615)||(37249204-37249311)
chr3 (532-603)||(46670539-46670610)
chr3 (529-615)||(48188404-48188490)
chr3 (564-621)||(22129067-22129124)
chr3 (526-615)||(37249786-37249875)
chr3 (503-606)||(1757301-1757404)
chr3 (534-621)||(22129275-22129362)
chr3 (526-621)||(33458184-33458279)
chr3 (508-615)||(45278549-45278656)
chr3 (529-615)||(1756576-1756662)
chr3 (529-615)||(43105822-43105908)
chr3 (526-615)||(2943937-2944025)
chr3 (580-641)||(21300210-21300271)
chr3 (527-606)||(28310629-28310708)
chr3 (526-621)||(51279254-51279349)
chr3 (541-583)||(11025975-11026017)
chr3 (532-606)||(30890236-30890310)
chr3 (532-618)||(30890476-30890562)
chr3 (529-583)||(43105259-43105313)
[»] chr7 (39 HSPs)
chr7 (503-731)||(37284109-37284337)
chr7 (503-763)||(37289150-37289410)
chr7 (503-621)||(12930772-12930890)
chr7 (503-621)||(12929287-12929405)
chr7 (503-605)||(7158231-7158333)
chr7 (526-619)||(7159197-7159289)
chr7 (503-615)||(12643100-12643212)
chr7 (503-651)||(31695566-31695714)
chr7 (503-603)||(38643550-38643650)
chr7 (532-640)||(43937923-43938031)
chr7 (502-603)||(38644660-38644761)
chr7 (503-615)||(4227160-4227272)
chr7 (503-615)||(47558030-47558142)
chr7 (526-621)||(12931004-12931099)
chr7 (526-621)||(27558118-27558213)
chr7 (547-621)||(26830007-26830081)
chr7 (526-640)||(37563377-37563491)
chr7 (503-616)||(4226125-4226238)
chr7 (494-615)||(27479978-27480099)
chr7 (503-615)||(45914526-45914636)
chr7 (503-603)||(45915808-45915908)
chr7 (504-615)||(12644121-12644232)
chr7 (526-621)||(12929520-12929615)
chr7 (532-606)||(19979980-19980053)
chr7 (501-619)||(40021489-40021607)
chr7 (526-606)||(5636049-5636128)
chr7 (508-640)||(31694476-31694608)
chr7 (508-615)||(22661362-22661469)
chr7 (532-639)||(26825659-26825766)
chr7 (532-619)||(37563622-37563709)
chr7 (526-621)||(43938160-43938255)
chr7 (532-606)||(27557877-27557951)
chr7 (503-605)||(40022527-40022628)
chr7 (532-640)||(47081876-47081984)
chr7 (532-603)||(26828504-26828575)
chr7 (532-606)||(20947222-20947296)
chr7 (537-603)||(44545879-44545945)
chr7 (564-622)||(47738978-47739036)
chr7 (580-621)||(23191120-23191161)
[»] scaffold0009 (3 HSPs)
scaffold0009 (503-644)||(261001-261142)
scaffold0009 (503-619)||(262425-262541)
scaffold0009 (746-790)||(261142-261186)
[»] scaffold0182 (2 HSPs)
scaffold0182 (503-763)||(13134-13394)
scaffold0182 (503-698)||(14283-14477)
[»] chr1 (55 HSPs)
chr1 (502-734)||(51935068-51935300)
chr1 (508-731)||(32619389-32619612)
chr1 (503-644)||(2828193-2828334)
chr1 (529-731)||(32622228-32622430)
chr1 (503-690)||(32238699-32238888)
chr1 (508-632)||(6344260-6344384)
chr1 (503-621)||(6345619-6345737)
chr1 (532-606)||(10019654-10019728)
chr1 (504-619)||(2829523-2829645)
chr1 (502-640)||(29043002-29043140)
chr1 (501-615)||(46282069-46282183)
chr1 (503-619)||(28534780-28534896)
chr1 (503-603)||(13295135-13295235)
chr1 (506-578)||(25064936-25065008)
chr1 (503-615)||(49093041-49093153)
chr1 (526-621)||(2953730-2953825)
chr1 (526-621)||(19755671-19755766)
chr1 (526-621)||(29980904-29980999)
chr1 (526-621)||(46849924-46850019)
chr1 (532-606)||(46545012-46545086)
chr1 (503-621)||(52563651-52563769)
chr1 (503-640)||(1047451-1047588)
chr1 (532-640)||(5183535-5183643)
chr1 (526-621)||(5183772-5183867)
chr1 (526-621)||(33347682-33347777)
chr1 (508-615)||(46282781-46282888)
chr1 (526-621)||(49002899-49002994)
chr1 (526-621)||(49003141-49003236)
chr1 (508-615)||(50062936-50063043)
chr1 (490-639)||(739466-739615)
chr1 (746-790)||(2828334-2828378)
chr1 (532-640)||(2953493-2953601)
chr1 (532-640)||(37152567-37152675)
chr1 (526-621)||(5926542-5926637)
chr1 (532-639)||(25414873-25414980)
chr1 (539-621)||(26953367-26953449)
chr1 (541-615)||(49093801-49093875)
chr1 (506-603)||(25065958-25066055)
chr1 (564-621)||(30830397-30830454)
chr1 (503-575)||(13295608-13295680)
chr1 (526-606)||(24701550-24701630)
chr1 (540-636)||(26953138-26953234)
chr1 (526-606)||(33030357-33030437)
chr1 (526-621)||(739242-739337)
chr1 (526-621)||(1040321-1040416)
chr1 (526-621)||(1047227-1047322)
chr1 (526-621)||(5926787-5926882)
chr1 (526-621)||(6056399-6056494)
chr1 (526-621)||(25415110-25415205)
chr1 (526-621)||(33030601-33030696)
chr1 (526-621)||(37152804-37152899)
chr1 (564-606)||(35312257-35312299)
chr1 (532-606)||(48380710-48380784)
chr1 (532-621)||(29980668-29980757)
chr1 (564-621)||(52564933-52564990)
[»] chr4 (41 HSPs)
chr4 (503-642)||(53477041-53477180)
chr4 (506-644)||(54590146-54590284)
chr4 (503-731)||(55012961-55013188)
chr4 (502-619)||(54591560-54591679)
chr4 (503-615)||(23455677-23455789)
chr4 (503-583)||(23454954-23455034)
chr4 (526-606)||(32846385-32846465)
chr4 (503-578)||(13336863-13336938)
chr4 (508-615)||(38982584-38982691)
chr4 (532-621)||(20086466-20086555)
chr4 (502-583)||(38813553-38813634)
chr4 (503-651)||(22882279-22882427)
chr4 (503-651)||(22933943-22934091)
chr4 (526-606)||(35730942-35731022)
chr4 (503-615)||(38814315-38814427)
chr4 (532-640)||(47862399-47862507)
chr4 (503-615)||(56556582-56556694)
chr4 (526-621)||(19916679-19916774)
chr4 (532-621)||(50245886-50245975)
chr4 (503-615)||(52816411-52816523)
chr4 (503-619)||(53475831-53475947)
chr4 (526-621)||(12691671-12691766)
chr4 (526-621)||(22249999-22250094)
chr4 (526-621)||(53559653-53559748)
chr4 (504-615)||(56557313-56557424)
chr4 (564-606)||(489465-489507)
chr4 (564-606)||(515257-515299)
chr4 (499-621)||(12691402-12691524)
chr4 (526-640)||(13872092-13872206)
chr4 (526-640)||(33294390-33294504)
chr4 (564-641)||(47981882-47981959)
chr4 (566-606)||(8286995-8287035)
chr4 (537-621)||(26601342-26601426)
chr4 (526-606)||(50246139-50246219)
chr4 (503-583)||(52815663-52815743)
chr4 (746-790)||(54590284-54590328)
chr4 (526-621)||(8287199-8287294)
chr4 (526-621)||(22249756-22249851)
chr4 (526-621)||(37677871-37677966)
chr4 (502-621)||(47862151-47862270)
chr4 (564-606)||(10128767-10128809)
[»] scaffold0018 (1 HSPs)
scaffold0018 (501-731)||(73107-73337)
[»] scaffold1493 (2 HSPs)
scaffold1493 (503-621)||(593-711)
scaffold1493 (539-621)||(859-941)
[»] scaffold0347 (2 HSPs)
scaffold0347 (505-603)||(14593-14691)
scaffold0347 (502-603)||(13608-13709)
[»] scaffold0279 (2 HSPs)
scaffold0279 (526-621)||(10876-10971)
scaffold0279 (532-606)||(11138-11212)
[»] scaffold0206 (1 HSPs)
scaffold0206 (526-621)||(10348-10443)
[»] scaffold0233 (2 HSPs)
scaffold0233 (532-606)||(8462-8536)
scaffold0233 (532-620)||(8699-8787)
[»] scaffold0201 (1 HSPs)
scaffold0201 (538-621)||(14159-14242)
[»] scaffold0321 (1 HSPs)
scaffold0321 (588-641)||(10908-10961)


Alignment Details
Target: chr5 (Bit Score: 429; Significance: 0; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 18 - 502
Target Start/End: Original strand, 4929753 - 4930237
Alignment:
Q  18 tagcaaagaaaaaagctcatgtaacaacaactaaatgcatataaatattgtacaattaacctaacacttgatatttttatacggtgtttgtataagatgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4929753 tagcaaagaaaaaagctcatgtaacaacaactaaatgcatataaattttgtccaattaatctaacacttgatatttttatacggtgtttgtataagatgt 4929852  T
Q  118 caattttctttgtctaaatatcttatattaaaaatattctttccaaaataaaaaatgcctgcttgtaccttaagatccgagccatggatatcatagtaga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  4929853 caattttctttgtctaaatatcttatattaaaaatattctttccaaaataaaaaatgcctgcttgtaccttaagatccgagccatggatattatagtagt 4929952  T
Q  218 agagcatctaatgatctctttccaaggagtaatacacaggaaaaggttctctccctttgtgccactaggtgagttaagtactagattatgttaaatttga 317  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4929953 aaagcatctaatgatctctttccaaggagttatacacaggaaaaggttctctccctttgtgccactaggtgagttaagtactagattatgttaaatttga 4930052  T
Q  318 tgatcgtacactctggattagatggtgtttaggattttgatgccttaattaattgttgacaacccataaacatgtttataaacctctttttatatacata 417  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4930053 tgatcgtacactctggattagatagtgtttgggattttgatgcattaattaattgttgacaacccataaacatgtttataatcctctttttatatacata 4930152  T
Q  418 aaaagttcagctccttttttgaactgtttttaaagatctcgttccacttaaaagttttaccgagttaacaaataatttaagttat 502  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4930153 aaaagttcagctccttttttaaactgtttttaaagatctcgttccacttaaaagttttaccaagttaacaaatagtttaagttat 4930237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 503 - 641
Target Start/End: Complemental strand, 14744830 - 14744692
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||||    
T  14744830 ggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 14744731  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtgga 641  Q
    |||||||||||||||||||||||  |||||| |||||||    
T  14744730 tgaattttcgtcctaattaaaaaaatttgcttaggtgga 14744692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 508 - 731
Target Start/End: Complemental strand, 21978112 - 21977889
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || |||||| || ||||||||||||||| ||||| || ||||||||||||| ||||||  || || || ||||||||||||     
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcatttgaaa 21978013  T
Q  608 tttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattg 707  Q
     ||||||||||||| ||| ||||||||||||||| ||| ||||| ||| |||||  | | ||||||  ||||| ||||||||||||||||||||  |  |    
T  21978012 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggaggg 21977913  T
Q  708 caatgacatttttgcccttaatga 731  Q
     ||||||| |||||||||||||||    
T  21977912 aaatgacaattttgcccttaatga 21977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 490 - 744
Target Start/End: Original strand, 8654095 - 8654349
Alignment:
Q  490 taatttaagttatggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgca 589  Q
    ||||||| |||| ||||||||||||  ||||||   || ||||||||||||||||||||||||| | ||| || |||||||||||||||||| |  ||||    
T  8654095 taatttaggtta-ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctgca 8654193  T
Q  590 aatattaatcatttgaattttcgtcctaattaaaaatttt-tgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggaca 688  Q
    | || ||||||||||||  |||||||||||||||||     || ||||||||| ||||||||||||| ||||| ||  ||| ||| |||||| ||| |||    
T  8654194 attactaatcatttgaaaattcgtcctaattaaaaaaaaaatgttgaggtggagggtaattagatacgtggcatctgacgaatggttttttgccagaaca 8654293  T
Q  689 catcagcagatggcaattgcaatgacatttttgcccttaatgaatcaagactcgcg 744  Q
    | |||||||| ||  |  |||||| ||||||| |||||| | ||||| ||||||||    
T  8654294 cgtcagcagaaggggagggcaatggcatttttacccttactaaatcaggactcgcg 8654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 529 - 731
Target Start/End: Original strand, 21972116 - 21972317
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaattt 628  Q
    |||||| || ||||||||||||||| ||| | || |||||||||||||||||||   || || || ||||||||||||  ||||||||||||| ||| ||    
T  21972116 aattatgggccatttgatttttcat-cctcagcttactaatcctcccattttgctcctgtaattactaatcatttgaaaattcgtcctaattacaaaatt 21972214  T
Q  629 ttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgacatttttgcccttaa 728  Q
    ||||||||||||| ||| ||||| ||| |||||  | | ||||||  ||||| ||||||||||||||||||||  |  | ||||||| ||||||||||||    
T  21972215 ttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggagggaaatgacaattttgcccttaa 21972314  T
Q  729 tga 731  Q
    |||    
T  21972315 tga 21972317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 503 - 614
Target Start/End: Complemental strand, 22870562 - 22870451
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||  || ||| ||||||||||    
T  22870562 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 22870463  T
Q  603 tgaattttcgtc 614  Q
    | || |||||||    
T  22870462 taaaatttcgtc 22870451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 580
Target Start/End: Original strand, 31107931 - 31108008
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccatttt 580  Q
    ||||||||||||||||||||   |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  31107931 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 31108008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 20857647 - 20857535
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||  ||| ||||||||| | ||||||||||||||||| | || ||||||||||||||||||||  || |||  |||||||||    
T  20857647 ggcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857548  T
Q  603 tgaattttcgtcc 615  Q
    |||| ||||||||    
T  20857547 tgaaatttcgtcc 20857535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 541 - 619
Target Start/End: Complemental strand, 39402210 - 39402132
Alignment:
Q  541 tttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaat 619  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcatttgagttttggtcctaat 39402132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 660
Target Start/End: Complemental strand, 8673858 - 8673701
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||| |||||| |||||||  |||||| | ||||||  ||||| |||||||||||||  ||||| | |||||||||    
T  8673858 ggctaaaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttgcaattgttaatcatt 8673759  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggc 660  Q
    |||| |||| |||||||||    |||||| ||||||||| | | ||||||||||||||    
T  8673758 tgaaatttcatcctaattacgtttttttgatgaggtggaggatgattagatacatggc 8673701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 20072969 - 20072857
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||    
T  20072969 ggcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20072870  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  20072869 tgaaagttcgtcc 20072857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 20856932 - 20857044
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| | ||||||||||||| ||||| || ||||||||||||||||||||  || |||  |||||||||    
T  20856932 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857031  T
Q  603 tgaattttcgtcc 615  Q
    |||| ||||||||    
T  20857032 tgaaatttcgtcc 20857044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 21260888 - 21260968
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||||||||||| |||||||||||||||||||||    
T  21260888 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaa 21260968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 14745471 - 14745566
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||||| |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  14745471 tgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 14745566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 640
Target Start/End: Complemental strand, 25253447 - 25253333
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||| ||||||||||| |||| |||||||||| |      
T  25253447 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttgacttttggtcctaattagatt 25253348  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  25253347 tttttgctgaggtgg 25253333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 640
Target Start/End: Complemental strand, 25317238 - 25317124
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||| ||||||||||| |||| |||||||||| |      
T  25317238 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttgacttttggtcctaattagatt 25317139  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  25317138 tttttgctgaggtgg 25317124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 502 - 615
Target Start/End: Original strand, 20072120 - 20072233
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||| |||||| | || ||||||||| | ||||||||||||| |||||||| |||||||||  |||||||||  || || || |||||||    
T  20072120 tggcttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcat 20072219  T
Q  602 ttgaattttcgtcc 615  Q
    |||||  |||||||    
T  20072220 ttgaaagttcgtcc 20072233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 510 - 615
Target Start/End: Original strand, 22869612 - 22869717
Alignment:
Q  510 atatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattt 609  Q
    |||||||||||||   || ||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||  || ||| ||||| ||||| || ||    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  610 tcgtcc 615  Q
    ||||||    
T  22869712 tcgtcc 22869717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 504 - 621
Target Start/End: Original strand, 25253087 - 25253204
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||  ||||||   ||||| ||||| |||||||| ||||| | |||||| | ||||||||| ||| ||||||  ||||||||||||||||||    
T  25253087 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25253186  T
Q  604 gaattttcgtcctaatta 621  Q
    || |||| ||||||||||    
T  25253187 gacttttggtcctaatta 25253204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 504 - 621
Target Start/End: Original strand, 25316877 - 25316994
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||  ||||||   ||||| ||||| |||||||| ||||| | |||||| | ||||||||| ||| ||||||  ||||||||||||||||||    
T  25316877 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25316976  T
Q  604 gaattttcgtcctaatta 621  Q
    || |||| ||||||||||    
T  25316977 gacttttggtcctaatta 25316994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 532 - 621
Target Start/End: Original strand, 37945023 - 37945112
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||||||||| ||||| | |||||| | ||||||||| ||| ||||||  |||||||||||||||||||| |||| ||||||||||    
T  37945023 tataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 37945112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 32052585 - 32052490
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  32052585 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 32052490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 33735674 - 33735579
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  33735674 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 33735579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 508 - 615
Target Start/End: Original strand, 36476770 - 36476877
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   |||||||||||| | ||||||||||||| ||||| || ||||||||||||||||||||  || || || ||||||||||||     
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  36476870 gttcgtcc 36476877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 529 - 615
Target Start/End: Complemental strand, 39181870 - 39181784
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||||||  |||||||    
T  39181870 aattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 39181784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 39181057 - 39181169
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||| | | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||    
T  39181057 ggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 39181156  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  39181157 tgaaagttcgtcc 39181169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 7015531 - 7015626
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||||| | |||| | ||||||| | ||| | ||||| |||||||||||||||||||| |||| ||||||||||    
T  7015531 tgcaaatataggccatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttgacttttggtcctaatta 7015626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 640
Target Start/End: Complemental strand, 13064795 - 13064656
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||  |||| |   ||||| |||| ||||||||| ||||| |  || || | ||||||||| ||| | ||||  |||||||||||||||    
T  13064795 atggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatca 13064696  T
Q  601 tttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||||| |||| |||||||||| |  |||||||||||||||    
T  13064695 tttgacttttggtcctaattagatttttttgctgaggtgg 13064656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 615
Target Start/End: Complemental strand, 36477471 - 36477364
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   |||||||||||| | ||||||||||||| | ||| || ||||||||||||||||||||  || || || ||||||||||||     
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  36477371 gttcgtcc 36477364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 575 - 640
Target Start/End: Complemental strand, 8323368 - 8323303
Alignment:
Q  575 cattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||    |||||||||||||||    
T  8323368 cattttgccattgcaaatattaatcatttgacttttggtcctaattaggtttttttgctgaggtgg 8323303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 580
Target Start/End: Complemental strand, 21979071 - 21978994
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccatttt 580  Q
    ||||||||||||||||||||   |||||||||| | ||||||||||||||| |  ||||| ||||||||||| |||||    
T  21979071 ggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctatttt 21978994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 22024231 - 22024151
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| |  || || | ||||||||| ||| ||||||| |||||||||||||||||||||    
T  22024231 tgcaaatataggtcatttgaattttcgtcacttaagttactaatccttccaatttgccactgcaaatattaatcatttgaa 22024151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 22533751 - 22533671
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | || ||| | ||||||||| | || |||||| |||||||||||||||||||||    
T  22533751 tgcaaatataggtcatttgaattttcgtccccgaagttactaatccttcaatgttgccattgcaaatattaatcatttgaa 22533671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 32052253 - 32052361
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | |||||| | ||||||||| ||| |  |||  |||||||||||||||||||| ||||  ||||||||| |  ||||||    
T  32052253 tataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttgacttttgatcctaattagatttttttg 32052352  T
Q  632 ctgaggtgg 640  Q
    || ||||||    
T  32052353 ctaaggtgg 32052361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 33735342 - 33735450
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||| ||||||||||||| | |||||| | ||||||||| ||| | || |  |||||||||||||||||||| |||| || |||||||    ||||||    
T  33735342 tataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatcatttgacttttggttctaattaggtttttttg 33735441  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  33735442 ctgaggtgg 33735450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 501 - 640
Target Start/End: Complemental strand, 12991174 - 12991035
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||  |||| |   ||||| |||| ||||||||| ||||| |  ||||| | ||||||||| ||| | | ||  |||||||||||||||    
T  12991174 atggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatca 12991075  T
Q  601 tttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||||| ||||  ||||||||| |  |||||||||||||||    
T  12991074 tttgacttttgatcctaattagatttttttgctgaggtgg 12991035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 615
Target Start/End: Original strand, 16532898 - 16533005
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| | ||||||| ||||||||||  || || || ||||||||||||     
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  16532998 gttcgtcc 16533005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 8323085 - 8323159
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||| | | |||| | ||||||||| ||||||||||| || | ||||||||||||||||    
T  8323085 tataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcatttgaa 8323159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 615
Target Start/End: Complemental strand, 16533727 - 16533613
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||| ||||||   |  ||||||||| | |||||||||||||  ||||||| | ||||||| ||||||||||  || || || ||||||    
T  16533727 atggcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatca 16533628  T
Q  601 tttgaattttcgtcc 615  Q
    ||||||  |||||||    
T  16533627 tttgaaagttcgtcc 16533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 606
Target Start/End: Original strand, 18934714 - 18934816
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||  ||||||   ||||| |||| ||||||||| ||||| | | |||| | |||||||||  |||||||||| ||||||||||| ||||||    
T  18934714 gcttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcattt 18934813  T
Q  604 gaa 606  Q
    |||    
T  18934814 gaa 18934816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 20705014 - 20704960
Alignment:
Q  586 tgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    |||||||||||||||||||| |||| |||||||||| |  |||||||||||||||    
T  20705014 tgcaaatattaatcatttgacttttggtcctaattagatttttttgctgaggtgg 20704960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 618
Target Start/End: Complemental strand, 6421983 - 6421891
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaa 618  Q
    ||||| |||| ||||||||| ||||| | |||||| | |||||||||  || | ||||  |||||||||||||||||||| |||| |||||||    
T  6421983 tgcaaatataagtcatttgaattttcgtccctgaaattactaatcctttcaatatgcccctgcaaatattaatcatttgacttttggtcctaa 6421891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 7015870 - 7015790
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||| ||| ||||| ||||| | |||||| | ||||||||| ||| | ||||| |||||||||||||||||||||    
T  7015870 tgcaaatataagtcgtttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaa 7015790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 746 - 790
Target Start/End: Complemental strand, 14744689 - 14744645
Alignment:
Q  746 gcaaagactattttacccatatcttcttccctcactctccttctc 790  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||    
T  14744689 gcaaagaccattttacccttatcttcttccctcattctccttctc 14744645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 34404507 - 34404586
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| |  ||||| | ||||||||| ||| |||| || |||||||||||||||||||||    
T  34404507 tgcaaatataggtcatttgaattttcgtcactgaagttactaatccttcca-tttggcattgcaaatattaatcatttgaa 34404586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 618
Target Start/End: Complemental strand, 14745668 - 14745582
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaa 618  Q
    |||||| ||||||| ||||| |  ||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| |||||||    
T  14745668 tataggccatttgaattttcgtcgctgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcctaa 14745582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 27753826 - 27753760
Alignment:
Q  540 atttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||| ||||| || ||||| | ||||||||| ||| | ||||| |||||||||||||||||||||    
T  27753826 atttgaattttcgtttctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaa 27753760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 41339708 - 41339634
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||| | | | || | ||||||| | |||||||||||  ||||||||||||||||||||    
T  41339708 tataggtcatttgaattttcgtccataaagttactaatcattccattttgccatcgcaaatattaatcatttgaa 41339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 4e-74; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 503 - 728
Target Start/End: Complemental strand, 17784485 - 17784260
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   |||||| ||||| ||||||||||||||| | |||||| ||||||||||||||||||||  |||||||||||||||||    
T  17784485 ggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcatt 17784386  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    | ||  |||||||||||||||||   || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17784385 ttaaaattcgtcctaattaaaaaaaattactgaggtggatggtaattagatatgtggcaactagcgactggctttttgtcaggacacgtcagcagatggc 17784286  T
Q  703 aattgcaatgacatttttgcccttaa 728  Q
    ||||||||||||||||||||||||||    
T  17784285 aattgcaatgacatttttgcccttaa 17784260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 509 - 595
Target Start/End: Complemental strand, 8427459 - 8427373
Alignment:
Q  509 aatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatatt 595  Q
    ||||||||||||||   |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||  ||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatatt 8427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 503 - 613
Target Start/End: Complemental strand, 33401226 - 33401116
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   |||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||  || |||  |||||||||    
T  33401226 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcatt 33401127  T
Q  603 tgaattttcgt 613  Q
    ||||| |||||    
T  33401126 tgaatattcgt 33401116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 532 - 641
Target Start/End: Original strand, 5064364 - 5064473
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||| ||||||||| ||||| | |||||| | ||||||||||||| ||||||  |||||||||||||||||||| |||| |||||||||| |  ||||||    
T  5064364 tataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcatttgacttttggtcctaattagatttttttg 5064463  T
Q  632 ctgaggtgga 641  Q
    ||||||||||    
T  5064464 ctgaggtgga 5064473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 502 - 619
Target Start/End: Original strand, 8427199 - 8427316
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||  ||||||   ||||| |||||||||||||| ||||| |  || || | ||||||||||||||||||||  |||||||||||||||     
T  8427199 tggcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatcag 8427298  T
Q  602 ttgaattttcgtcctaat 619  Q
    |||||||||| |||||||    
T  8427299 ttgaattttcatcctaat 8427316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 502 - 615
Target Start/End: Original strand, 33399965 - 33400078
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || |||||||    
T  33399965 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 33400064  T
Q  602 ttgaattttcgtcc 615  Q
    |||||  |||||||    
T  33400065 ttgaaagttcgtcc 33400078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 532 - 640
Target Start/End: Complemental strand, 13480563 - 13480455
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  | |||||||||||||||||| |||| |||||||||| |  ||||||    
T  13480563 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcatttgacttttggtcctaattagatttttttg 13480464  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  13480463 ctgaggtgg 13480455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 32337928 - 32337833
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||| ||||| ||| | ||||  |||||||||||||||||||| |||||||||||||||    
T  32337928 tgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcatttgacttttcgtcctaatta 32337833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 621
Target Start/End: Original strand, 23291773 - 23291862
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||| ||||||| ||||||| |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  23291773 tataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 23291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 4116799 - 4116911
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||  ||||||   || ||||||||| | ||||||||||||| ||||| || ||||||||||||||||||||  || |||  |||||||||    
T  4116799 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4116898  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  4116899 tgaaaattcgtcc 4116911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 4117647 - 4117535
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||  ||||||   || ||||||||| | ||||||||||||| ||||| || ||||||||||||||||||||  || |||  |||||||||    
T  4117647 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4117548  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  4117547 tgaaaattcgtcc 4117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 14656480 - 14656592
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   ||||||||||||   ||||||||||||| ||||| || ||||||||||| ||||||||  || |||  |||||||||    
T  14656480 ggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 14656579  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  14656580 tgaaagttcgtcc 14656592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 13480231 - 13480326
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  13480231 tgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 13480326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 606
Target Start/End: Complemental strand, 3299942 - 3299840
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    ||||||||||| ||||| |   ||||| |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||| ||||||||||||||||||    
T  3299942 gcttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcattt 3299843  T
Q  604 gaa 606  Q
    |||    
T  3299842 gaa 3299840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 5064696 - 5064601
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||  | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  5064696 tgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 5064601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 15819851 - 15819756
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | | ||  |||||||| ||||||||||| |||| ||||||||||    
T  15819851 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatcatttgacttttggtcctaatta 15819756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 641
Target Start/End: Complemental strand, 22494241 - 22494126
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||  ||||||||| |||||||||| |||| |||||||||         
T  22494241 tgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccctgcaaatatcaatcatttgacttttggtcctaattgggtt 22494142  T
Q  626 tttttgctgaggtgga 641  Q
    ||||||||||||||||    
T  22494141 tttttgctgaggtgga 22494126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 621
Target Start/End: Complemental strand, 23292129 - 23292010
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||  |||| |  |||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | |  |  ||||||||||||||||    
T  23292129 tggcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatcat 23292030  T
Q  602 ttgaattttcgtcctaatta 621  Q
    |||| ||||  |||||||||    
T  23292029 ttgacttttgatcctaatta 23292010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 1066494 - 1066420
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||| ||||| | |||||| | ||||||  | ||||||||||| |||||||||||||||||||||    
T  1066494 tatagatcatttgaattttcgtccctgaagttactaatatttccattttgccattgcaaatattaatcatttgaa 1066420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 615
Target Start/End: Complemental strand, 1661504 - 1661418
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||| ||  || || || ||||||||||||  |||||||    
T  1661504 aattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttgaaagttcgtcc 1661418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 610
Target Start/End: Complemental strand, 20995041 - 20994968
Alignment:
Q  537 gtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaatttt 610  Q
    ||||||||| ||||||| |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| ||||    
T  20995041 gtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgactttt 20994968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 14657309 - 14657197
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   |  ||||||||| | |||||||||| || ||||| || ||||||||| ||||||||||  || || || ||||||||    
T  14657309 ggcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatt 14657210  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  14657209 tgaaagttcgtcc 14657197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 30234953 - 30234869
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaatttt 610  Q
    ||||| |||||||  ||||| ||||||| |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| ||||    
T  30234953 tgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgactttt 30234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 738058 - 737963
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||  | ||| |||||||||||||| |||| ||||||||||    
T  738058 tgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatcatttgacttttggtcctaatta 737963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 3299582 - 3299677
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| ||||||||| ||||| | | |||| | ||||||| | ||| ||||||| |||||||||||||||||| | ||||  |||||||||    
T  3299582 tgcaaatataagtcatttgaattttcgtccatgaagttactaatcattccaatttgccattgcaaatattaatcatttcacttttgatcctaatta 3299677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 641
Target Start/End: Original strand, 20561011 - 20561065
Alignment:
Q  586 tgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgga 641  Q
    |||||||||||||||||||| |||| ||||||||| | | ||||||||||||||||    
T  20561011 tgcaaatattaatcatttgacttttggtcctaatt-atattttttgctgaggtgga 20561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 640
Target Start/End: Original strand, 21880362 - 21880501
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||  |||| ||  || || |||| ||||||||| ||||| |  ||||| | |||||||||  || | ||||  |||||||||||||||    
T  21880362 atggcttaaatatgtctttcgttcctgtaaatataagtcatttgaattttcgtctctgaagttactaatcctttcaatctgcccctgcaaatattaatca 21880461  T
Q  601 tttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||||| |||| || |||||||    |||||||||||||||    
T  21880462 tttgacttttggtactaattaggtttttttgctgaggtgg 21880501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 32337587 - 32337682
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||  ||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| | ||||||||    
T  32337587 tgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttgggcctaatta 32337682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 620
Target Start/End: Complemental strand, 26503715 - 26503621
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatt 620  Q
    ||||| |||| ||||||||| ||||| | | |||| | | ||||||| ||| |  |||| |||||||||||||||||||| |||| |||||||||    
T  26503715 tgcaaatataagtcatttgaattttcgtccatgaagttattaatccttccaatccgccactgcaaatattaatcatttgacttttggtcctaatt 26503621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 536 - 606
Target Start/End: Original strand, 31879490 - 31879560
Alignment:
Q  536 ggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||| ||||| | || ||| | ||||||| | ||||||||||| ||||||||||||| |||||||    
T  31879490 ggtcatttgaattttcgtccccgaagttactaatctttccattttgccattgcaaatattaataatttgaa 31879560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 606
Target Start/End: Original strand, 31386861 - 31386902
Alignment:
Q  565 ctaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||| ||||||||| | |||||||||||||||||||||    
T  31386861 ctaatccttccattttgcaattgcaaatattaatcatttgaa 31386902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 1e-64; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 503 - 732
Target Start/End: Original strand, 38598964 - 38599193
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||||  |||||||||||||||||    
T  38598964 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 38599063  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    ||||  |||||||||||||||||  | |||||||||||||||||||||||||  |||||| | | |||||| ||||||||||||||  | |||||| |||    
T  38599064 tgaaaattcgtcctaattaaaaaaatatgctgaggtggatggtaattagataagtggcaaatggtgactgggtttttgtcaggacatgtaagcagaaggc 38599163  T
Q  703 aattgcaatgacatttttgcccttaatgaa 732  Q
    || ||||||||||||||| |||||||||||    
T  38599164 aaatgcaatgacatttttacccttaatgaa 38599193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 503 - 763
Target Start/End: Complemental strand, 33497716 - 33497456
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| ||||||||||||||| | ||| || ||||||||||||||||||||  ||||| || ||||||||    
T  33497716 ggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccctgcaattactaatcatt 33497617  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    ||||  ||||||||||||| |||  |||||||||||||| ||||||||||||| |||||  | | || |||  |||||||||||||| ||||||||||||    
T  33497616 tgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagatacgtggcattttgtgaatggagttttgtcaggacacgtcagcagatggc 33497517  T
Q  703 aattgcaatgacatttttgcccttaatgaatcaagactcgcgtgcaaagactattttaccc 763  Q
     |  | ||||||||||||||||||||||| ||  |||||||| |||| ||| |||||||||    
T  33497516 gagggaaatgacatttttgcccttaatgagtctggactcgcgcgcaatgaccattttaccc 33497456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 507 - 728
Target Start/End: Original strand, 33497020 - 33497241
Alignment:
Q  507 taaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||  ||||| || ||||||||||||    
T  33497020 taaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttgcaattactaatcatttgaa 33497119  T
Q  607 ttttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaatt 706  Q
      ||||||||||||| |||  |||||||||||||| ||||||||||||| || ||  | | || |||  |||||||||||||| |||||||||||| |      
T  33497120 aattcgtcctaattacaaaaatttgctgaggtggagggtaattagatacgtgacatttggtgaatggagttttgtcaggacacgtcagcagatggcgagg 33497219  T
Q  707 gcaatgacatttttgcccttaa 728  Q
    | ||||||||||||||||||||    
T  33497220 gaaatgacatttttgcccttaa 33497241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 503 - 621
Target Start/End: Complemental strand, 25288176 - 25288058
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||  |||||||||||||||||    
T  25288176 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 25288077  T
Q  603 tgaattttcgtcctaatta 621  Q
    ||| |||| || |||||||    
T  25288076 tgacttttggttctaatta 25288058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 503 - 641
Target Start/End: Complemental strand, 7393245 - 7393107
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||  ||||||||   |||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |  |||||||||||||||||    
T  7393245 ggcttaaatagacatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatt 7393146  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtgga 641  Q
    |||| ||| |||||||| | || | ||||||||||||||    
T  7393145 tgaaatttagtcctaatcacaattgtttgctgaggtgga 7393107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 510 - 763
Target Start/End: Complemental strand, 24379089 - 24378837
Alignment:
Q  510 atatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattt 609  Q
    |||||||||||||   ||||||||  ||||||||||| |||||| | |||||| ||||||||||| ||||||||  ||||||||  || ||||| ||  |    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgcccctgcaaataaaaagcattttaaaat 24378990  T
Q  610 tcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgca 709  Q
    ||||||||||||||||   ||| |||||||||||  |||||||||| ||||||||   |||||| | || || ||||||| | |||| | | |  |||||    
T  24378989 tcgtcctaattaaaaa-aattgttgaggtggatgaaaattagatacgtggcaactgttgactgggtcttcgttaggacacgtaagcataagcctcttgca 24378891  T
Q  710 atgacatttttgcccttaatgaatcaagactcgcgtgcaaagactattttaccc 763  Q
    |||||||||||||||||| |||| || |||||| | | |||||| |||||||||    
T  24378890 atgacatttttgcccttactgaagcaggactcgtgcgtaaagaccattttaccc 24378837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 502 - 625
Target Start/End: Original strand, 24377180 - 24377303
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    ||||| ||||||||||||||||  ||||||||  ||||||||||  |||||| |||||||| ||||||||||||||||| ||  |||||||||||| |||    
T  24377180 tggctaaaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagcat 24377279  T
Q  602 ttgaattttcgtcctaattaaaaa 625  Q
    || ||  |||||||||||||||||    
T  24377280 ttcaaaattcgtcctaattaaaaa 24377303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 500 - 621
Target Start/End: Original strand, 4970122 - 4970243
Alignment:
Q  500 tatggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatc 599  Q
    ||||||| |||||||||||||||   ||||||||  ||||||||||  |||||| |||||||| ||||||||| ||||||||||  |||||||||||| |    
T  4970122 tatggctaaaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagc 4970221  T
Q  600 atttgaattttcgtcctaatta 621  Q
    ||||||| ||| ||||||||||    
T  4970222 atttgaaatttagtcctaatta 4970243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 504 - 651
Target Start/End: Original strand, 1231527 - 1231674
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||||||||||   | |||||||||| | ||||||||||||| | ||| || ||||||||||||||||| ||  || ||| |||||||||||    
T  1231527 gcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcattt 1231626  T
Q  604 gaattttcgtcctaattaaaaatttttgctgaggtggatggtaattag 651  Q
    |||  ||||||||||||| |  |||||||||| |||||| || |||||    
T  1231627 gaaaattcgtcctaattacatttttttgctgacgtggatagtgattag 1231674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 622
Target Start/End: Original strand, 27436562 - 27436682
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||||||||||   ||||| |||||||| ||||| ||||| | |||||| | ||||||| |  |||||||||| ||||| || |||||||    
T  27436562 tggcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcat 27436661  T
Q  602 ttgaattttcgtcctaattaa 622  Q
    ||||| ||| |||||||||||    
T  27436662 ttgaaatttagtcctaattaa 27436682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 651
Target Start/End: Original strand, 29574742 - 29574890
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||| ||||||||||||||  |||||| ||| |||| ||||||||| |||||||  |  ||||| | ||||||| |    
T  29574742 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcact 29574841  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattag 651  Q
    |||| ||| |||||||| | |  |||||||||||||||| |||||||||    
T  29574842 tgaaatttggtcctaatcacatttttttgctgaggtggagggtaattag 29574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 9632351 - 9632431
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| |||||||| || |||||||||||||||||||||    
T  9632351 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaa 9632431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 34213764 - 34213876
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   |||||||||||| | ||||||||||||| ||||| || ||||||||||| ||||||||  || |||  |||||||||    
T  34213764 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 34213863  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  34213864 tgaaagttcgtcc 34213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 34665770 - 34665882
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||    
T  34665770 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 34665869  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  34665870 tgaaagttcgtcc 34665882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 545 - 640
Target Start/End: Original strand, 7392250 - 7392345
Alignment:
Q  545 atttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||||||||| |||||||| |||||||||||||||||  |  ||||||||||||||||||||| ||| |||||||| |  | | |||||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtcctaatcacgattgtttgctgaggtgg 7392345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 40525530 - 40525625
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| ||||||||| ||||| | |||||| | ||||||||| ||| | ||||| |||||||||||||||||||| |||| ||||||||||    
T  40525530 tgcaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcctaatta 40525625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 629 - 763
Target Start/End: Original strand, 24377718 - 24377852
Alignment:
Q  629 ttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgacatttttgcccttaa 728  Q
    |||||||||||||||  |||||||||| |||||||    |||||| | || |||||||||| | |||||| | |  |||||||||||||||||||||||     
T  24377718 ttgctgaggtggatgaaaattagatacgtggcaaccgttgactgggtcttcgtcaggacacctaagcagaagcctcttgcaatgacatttttgcccttac 24377817  T
Q  729 tgaatcaagactcgcgtgcaaagactattttaccc 763  Q
    |||| || |||||||  | |||||| |||||||||    
T  24377818 tgaagcaggactcgcacgtaaagaccattttaccc 24377852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 640
Target Start/End: Original strand, 41801839 - 41801953
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||| |||||||| | ||||||||| ||| | ||||  |||||||||||||||||||| ||||  || ||||||        
T  41801839 tgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttgatcataattaggtt 41801938  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  41801939 tttttgctgaggtgg 41801953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 619
Target Start/End: Complemental strand, 27437620 - 27437503
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||||||||||   ||||| |||||| | ||||| ||||| | |||||| | ||||||| |  |||||||||| ||||| || |||||||    
T  27437620 tggcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcat 27437521  T
Q  602 ttgaattttcgtcctaat 619  Q
    ||||| ||| ||||||||    
T  27437520 ttgaaatttagtcctaat 27437503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 501 - 621
Target Start/End: Complemental strand, 23424898 - 23424778
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||  |||| ||  ||||| |||||| ||||||| ||||| | |||||| | ||||||| | ||| | ||||  |||||||||||||||    
T  23424898 atggcttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatca 23424799  T
Q  601 tttgaattttcgtcctaatta 621  Q
    ||||| |||| ||||||||||    
T  23424798 tttgatttttggtcctaatta 23424778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 20096043 - 20096138
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| ||||||||| ||||  | |||||| | ||||||||| ||| ||||||  |||||||||||||||||||| |||| ||||||||||    
T  20096043 tgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaatttgcctctgcaaatattaatcatttgacttttggtcctaatta 20096138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 618
Target Start/End: Original strand, 36574817 - 36574932
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| ||||||||||||||| | ||||  |||||| |||||||  |||||| |||||||| |||||||||||||  |   |  |||||||||||||||||    
T  36574817 ggctaaaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctcccaaatcttccctgcaaatattaatcatt 36574916  T
Q  603 tgaattttcgtcctaa 618  Q
    ||| |||| |||||||    
T  36574917 tgagttttggtcctaa 36574932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 37343143 - 37343048
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | |||||| || ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  37343143 tgcaaatataggtcatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttgacttttggtcctaatta 37343048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 40422183 - 40422278
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||| ||| ||||| |  ||||| | ||||||||| ||| | ||||| |||||||||||||||||||| |||| ||||||||||    
T  40422183 tgcaaatataggtcatatgaattttcgtctctgaagtaactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcctaatta 40422278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 621
Target Start/End: Complemental strand, 4463526 - 4463408
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   ||||| |||||| |||||||  |||||| |||||||| ||||||||||| ||| |  |  ||||| | ||||||| |    
T  4463526 ggcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcctattctttccctgcaattgttaatcact 4463427  T
Q  603 tgaattttcgtcctaatta 621  Q
    |||| ||| ||||||||||    
T  4463426 tgaaatttggtcctaatta 4463408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 34214629 - 34214516
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcc-tgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    ||||||||||||| ||||||   || ||||||||| | |||||||||||| ||| |||||| ||||||||| ||||||||||  || || || |||||||    
T  34214629 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcat 34214530  T
Q  602 ttgaattttcgtcc 615  Q
    |||||  |||||||    
T  34214529 ttgaaagttcgtcc 34214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 606
Target Start/End: Complemental strand, 1232897 - 1232796
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||| ||||||||||||||| ||||| ||     ||||||||||||||||  || ||| ||||||||||    
T  1232897 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagct--tgtatcctcccattttgcccctgtaaaaattaatcatt 1232800  T
Q  603 tgaa 606  Q
    ||||    
T  1232799 tgaa 1232796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 20096385 - 20096287
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatat---taatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | ||||||||| ||| | |||| ||||||||||   |||||||||||||||| ||||||||||    
T  20096385 tgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatatatttaatcatttgaattttggtcctaatta 20096287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 640
Target Start/End: Complemental strand, 29575980 - 29575848
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||||||||||   ||||| |||||  |||||||  |||||| ||| || | ||||||||||||||| |  | |||||| | ||||||| |||||     
T  29575980 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcacttgaaa 29575881  T
Q  608 tttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||| |||||||||| |  |||||||||||||||    
T  29575880 tttggtcctaattacatttttttgctgaggtgg 29575848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 40422521 - 40422441
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| | | | ||||| |||||||||||||||||||||    
T  40422521 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcatttgaa 40422441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 547796 - 547701
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| ||||| |||||||| ||||| | ||| || | ||||||||| ||| | ||||| | |||||||||||||||||| |||| ||||||||||    
T  547796 tgcaaatatagatcatttgaattttcgtccctaaagttactaatccttccaatctgccactacaaatattaatcatttgacttttggtcctaatta 547701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 27857103 - 27857008
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | ||||||| | ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  27857103 tgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcatttgacttttggtcctaatta 27857008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 36623714 - 36623619
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | |||||| || ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  36623714 tgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttgacttttggtcctaatta 36623619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 43866734 - 43866829
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | |||||| || ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  43866734 tgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttgacttttggtcctaatta 43866829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 641
Target Start/End: Complemental strand, 11478477 - 11478391
Alignment:
Q  555 cctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgga 641  Q
    |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    ||||||||||||||||    
T  11478477 cctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgatttttggtcctaattaggtttttttgctgaggtgga 11478391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 621
Target Start/End: Original strand, 25287828 - 25287910
Alignment:
Q  539 catttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  25287828 catttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 25287910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 583
Target Start/End: Complemental strand, 34666614 - 34666560
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgcc 583  Q
    ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||    
T  34666614 aattataggccgtttgatttttcatccctgaacttactaatccttccattttgcc 34666560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 606
Target Start/End: Complemental strand, 15716238 - 15716157
Alignment:
Q  525 atgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||| |||| ||||||| | ||||| | |||||| | ||||||||| | ||||||||| | |||||||||||||||||||    
T  15716238 atgcaaatatatgtcatttaaattttcgtccctgaagttactaatccttctattttgccattacaaatattaatcatttgaa 15716157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 640
Target Start/End: Original strand, 37342818 - 37342919
Alignment:
Q  539 catttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggt 638  Q
    ||||||| ||||| |||||||| | |||||||||  || |  |||  |||||||||||||||||||| |||| ||||||||||    |||||||||||||    
T  37342818 catttgaattttcgttcctgaagttactaatcctttcaatccgcccctgcaaatattaatcatttgacttttggtcctaattaggtttttttgctgaggt 37342917  T
Q  639 gg 640  Q
    ||    
T  37342918 gg 37342919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 621
Target Start/End: Complemental strand, 40525862 - 40525773
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||| |||||| ||||| | |||||| | ||||||| | ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  40525862 tataggttatttgaattttcgtccctgaaattactaatcattccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 40525773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 7754 - 7659
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | | |||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||| ||||||    
T  7754 tgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcataatta 7659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 11478168 - 11478263
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | | |||| | |||||||||  || | ||||  |||||||||||||||||||| |||| | ||||||||    
T  11478168 tgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggccctaatta 11478263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 29190520 - 29190425
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||  ||||||| |||| ||  ||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  29190520 tgcaaatatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttagtcctaatta 29190425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 36623375 - 36623470
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | |||||||||  || | |||   |||||||||||||||||||| |||| ||||||||||    
T  36623375 tgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgctcctgcaaatattaatcatttgacttttggtcctaatta 36623470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 41182257 - 41182162
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| ||||||||| ||||| | |||||| | ||||||| |  || | ||||  |||||||||||||||||||| |||| ||||||||||    
T  41182257 tgcaaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 41182162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 606
Target Start/End: Original strand, 13566475 - 13566513
Alignment:
Q  568 atcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  13566475 atccttccattttgccattgcaaatattaatcatttgaa 13566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 564 - 606
Target Start/End: Original strand, 23514082 - 23514124
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||  |||||||||| |||||||||||||||||||||    
T  23514082 actaatcctttcattttgccattgcaaatattaatcatttgaa 23514124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 29190243 - 29190297
Alignment:
Q  586 tgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    |||||||||||||||||||| |||| |||||||||| |  ||||| |||||||||    
T  29190243 tgcaaatattaatcatttgacttttggtcctaattagatttttttcctgaggtgg 29190297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 41767665 - 41767731
Alignment:
Q  555 cctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||| ||| ||||||||||||| ||||||| ||||||||||||||| || || ||| |||| |||||    
T  41767665 cctgtacttactaatcctcccaatttgccactgcaaatattaatcacttaaaatttggtccaaatta 41767731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 621
Target Start/End: Complemental strand, 41773662 - 41773596
Alignment:
Q  555 cctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||| ||| ||||||||||||| ||||||| ||||||||||||||| || || ||| |||| |||||    
T  41773662 cctgtacttactaatcctcccaatttgccactgcaaatattaatcacttaaaatttggtccaaatta 41773596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 43867012 - 43866958
Alignment:
Q  586 tgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    |||||||||||||||||||| |||| ||||||||||    |||||||||||||||    
T  43867012 tgcaaatattaatcatttgacttttggtcctaattaggtttttttgctgaggtgg 43866958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 503 - 763
Target Start/End: Original strand, 20101770 - 20102029
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||  ||||| || ||||||||    
T  20101770 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattaataatcatt 20101869  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    ||||  |||||||||||||||||   ||||||||||||||| ||||||||||| ||||| || |||| ||| ||||||||||||||| ||||||||||||    
T  20101870 tgaaaattcgtcctaattaaaaa-aattgctgaggtggatgctaattagatacgtggcatctggcgaatggttttttgtcaggacacgtcagcagatggc 20101968  T
Q  703 aattgcaatgacatttttgcccttaatgaatcaagactcgcgtgcaaagactattttaccc 763  Q
    |   | ||||||||||||||||||||| ||||  |||| |||  ||| ||| |||||||||    
T  20101969 atgggaaatgacatttttgcccttaataaatctggacttgcgcacaatgaccattttaccc 20102029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 515 - 719
Target Start/End: Complemental strand, 23206496 - 23206292
Alignment:
Q  515 catttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtc 614  Q
    |||||||| | ||||| |||||| |||||||  |||||| | |||| | |||||||||| |||||||||| |||||||||||| |||| |||  ||||||    
T  23206496 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtc 23206397  T
Q  615 ctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgac 714  Q
    |||||||||||  |||||| | ||||||||||||||||||  |||| ||| | |||||| ||||||||||||||| | |||||| |||||||||||||||    
T  23206396 ctaattaaaaaaatttgcttacgtggatggtaattagatatgtggcgactggtgactgggtttttgtcaggacacgtaagcagaaggcaattgcaatgac 23206297  T
Q  715 atttt 719  Q
    |||||    
T  23206296 atttt 23206292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 515 - 719
Target Start/End: Complemental strand, 23678100 - 23677896
Alignment:
Q  515 catttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtc 614  Q
    |||||||| | ||||| |||||| |||||||  |||||| | |||| | |||||||||| |||||||||| |||||||||||| |||| |||  ||||||    
T  23678100 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtc 23678001  T
Q  615 ctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgac 714  Q
    |||||||||||  |||||| | ||||||||||||||||||  |||| ||| | |||||| ||||||||||||||| | |||||| |||||||||||||||    
T  23678000 ctaattaaaaaaatttgcttacgtggatggtaattagatatgtggcgactggtgactgggtttttgtcaggacacgtaagcagaaggcaattgcaatgac 23677901  T
Q  715 atttt 719  Q
    |||||    
T  23677900 atttt 23677896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 503 - 763
Target Start/End: Complemental strand, 20103244 - 20102985
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||| ||   || ||||||||| |||| |||||||||| ||||| || |||||||||||||||||||| |||||| || ||||||||    
T  20103244 ggcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccatgcaattactaatcatt 20103145  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    ||||  |||||||||||||||||   ||||||||||||||   |||||||||| ||||||||   |||||| | || |||||||||| | |||||| | |    
T  20103144 tgaaaattcgtcctaattaaaaa-aattgctgaggtggataaaaattagatacgtggcaactgttgactgggtcttcgtcaggacacgtaagcagaagcc 20103046  T
Q  703 aattgcaatgacatttttgcccttaatgaatcaagactcgcgtgcaaagactattttaccc 763  Q
      |||||||||||||||||| |||| |||| || |||||||  | |||||| |||||||||    
T  20103045 tcttgcaatgacatttttgcacttactgaagcaggactcgcacgtaaagaccattttaccc 20102985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 564 - 743
Target Start/End: Original strand, 23183660 - 23183838
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaac 663  Q
    ||||||||||| ||||||||| |||||||||||| ||||| ||  |||||||||||||||  |||||||||||||||||||||| ||| ||| ||||  |    
T  23183660 actaatcctcctattttgccactgcaaatattaagcatttaaaaattcgtcctaattaaat-tttttgctgaggtggatggtaagtagttacgtggcggc 23183758  T
Q  664 tagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgacatttttgcccttaatgaatcaagactcgc 743  Q
    | | || ||| ||||| ||||||||| | |||| | || ||||||||||| ||||||||||||||||||||| |||||||    
T  23183759 tggtgattgggtttttttcaggacacgtaagcaaaaggaaattgcaatgatatttttgcccttaatgaatcaggactcgc 23183838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 564 - 743
Target Start/End: Original strand, 23594917 - 23595095
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaac 663  Q
    ||||||||||| ||||||||| |||||||||||| ||||| ||  |||||||||||||||  |||||||||||||||||||||| ||| ||| ||||  |    
T  23594917 actaatcctcctattttgccactgcaaatattaagcatttaaaaattcgtcctaattaaat-tttttgctgaggtggatggtaagtagttacgtggcggc 23595015  T
Q  664 tagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgacatttttgcccttaatgaatcaagactcgc 743  Q
    | | || ||| ||||| ||||||||| | |||| | || ||||||||||| ||||||||||||||||||||| |||||||    
T  23595016 tggtgattgggtttttttcaggacacgtaagcaaaaggaaattgcaatgatatttttgcccttaatgaatcaggactcgc 23595095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 503 - 651
Target Start/End: Original strand, 24387351 - 24387499
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||||| ||||| ||||||||| ||||| || |||||||||||||||||| | ||| ||| ||||||||||    
T  24387351 ggcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcatt 24387450  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattag 651  Q
    ||||  ||||||||||||| |  |||||||| | |||||| || |||||    
T  24387451 tgaaaattcgtcctaattacatttttttgctaacgtggatagtgattag 24387499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 502 - 615
Target Start/End: Complemental strand, 25624534 - 25624421
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||||||||||   || ||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||  || ||| |||||||||    
T  25624534 tggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatcat 25624435  T
Q  602 ttgaattttcgtcc 615  Q
    || || ||||||||    
T  25624434 ttaaaatttcgtcc 25624421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 532 - 619
Target Start/End: Complemental strand, 19620864 - 19620777
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaat 619  Q
    ||||||||||||||  |||||| |||||||| ||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||    
T  19620864 tataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttgaattttcatcctaat 19620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 615
Target Start/End: Original strand, 25623286 - 25623400
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||||||||||   |  ||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||  || ||| ||||||||    
T  25623286 atggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 25623385  T
Q  601 tttgaattttcgtcc 615  Q
    ||| || ||||||||    
T  25623386 tttaaaatttcgtcc 25623400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 16366992 - 16367100
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| |||||||||| |  ||||||    
T  16366992 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaattagatttttttg 16367091  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  16367092 ctgaggtgg 16367100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 603
Target Start/End: Complemental strand, 24388356 - 24388256
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||| |  |||||||||||||| ||||| || ||||||||| ||||||||||| || ||| ||||||||||    
T  24388356 ggcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcatt 24388257  T
Q  603 t 603  Q
    |    
T  24388256 t 24388256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 606
Target Start/End: Complemental strand, 9694104 - 9694023
Alignment:
Q  525 atgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||| |||||||||||||| ||||| | |||||| | ||||||||| |||||||| || |||||||||||||||||||||    
T  9694104 atgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaa 9694023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 29957817 - 29957929
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||    
T  29957817 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 29957916  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  29957917 tgaaagttcgtcc 29957929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 641
Target Start/End: Complemental strand, 1150298 - 1150183
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||| | |||||| | |||||||||  || | ||||  |||||||||||||||||||| |||| |||||||||| |      
T  1150298 tgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggtcctaattagatt 1150199  T
Q  626 tttttgctgaggtgga 641  Q
    |||||| |||||||||    
T  1150198 tttttgttgaggtgga 1150183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 606
Target Start/End: Original strand, 20982524 - 20982627
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||    
T  20982524 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20982623  T
Q  603 tgaa 606  Q
    ||||    
T  20982624 tgaa 20982627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 640
Target Start/End: Complemental strand, 32519516 - 32519402
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||| ||||||||| ||||| |||||||| | |||||||||  || | ||||  |||||||||||||||||||| |||| ||||||||||        
T  32519516 tgcaaatataagtcatttgaattttcgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggtcctaattaggtt 32519417  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  32519416 tttttgctgaggtgg 32519402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 615
Target Start/End: Complemental strand, 20983362 - 20983249
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||| ||||||   || ||||||||  | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || |||||||    
T  20983362 tggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 20983263  T
Q  602 ttgaattttcgtcc 615  Q
    |||||  |||||||    
T  20983262 ttgaaagttcgtcc 20983249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 28599450 - 28599530
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| ||||| |||||||| ||||| | | |||| | ||||||||| ||||||||||| |||||||||||||||||||||    
T  28599450 tgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcatttgaa 28599530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 1149960 - 1150055
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| |  |||  |||||||||||||||||||| |||| ||||||||||    
T  1149960 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcatttgacttttggtcctaatta 1150055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 16367324 - 16367229
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  16367324 tgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcctaatta 16367229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 20911153 - 20911248
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||| ||||||    
T  20911153 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcataatta 20911248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 621
Target Start/End: Complemental strand, 33882911 - 33882856
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  33882911 actaatcctcccattttgcca--gcaaatattaatcacttgaattttggtcctaatta 33882856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 603
Target Start/End: Original strand, 17366626 - 17366726
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||||||||| |  ||||||  |||||| |||||||||||||| ||||| | |||||| | | ||||||| ||| | ||||| |||||||||||||||||    
T  17366626 ggcttaaataggtctttcatccatgcaaatataggtcatttgaattttcttccctgaatttaataatccttccaatctgccactgcaaatattaatcatt 17366725  T
Q  603 t 603  Q
    |    
T  17366726 t 17366726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 32519178 - 32519273
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | |||   |||||||||||||||||||| |||| || |||||||    
T  32519178 tgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatttgacttttggttctaatta 32519273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 640
Target Start/End: Original strand, 18476930 - 18477044
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||  | |||||| | ||||||||| ||| | ||||| ||||||  |||||||||||| ||||  |||||||||        
T  18476930 tgcaactataggtcatttgaatttttgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttgacttttgatcctaattaggtt 18477029  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  18477030 tttttgctgaggtgg 18477044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 622
Target Start/End: Original strand, 19606946 - 19607036
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaa 622  Q
    |||| ||||||||| ||||| | |||||| | ||||||||| ||| | || |  |||||||||||||||||||| |||| |||||||||||    
T  19606946 tatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgtcgttgcaaatattaatcatttgacttttggtcctaattaa 19607036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 640
Target Start/End: Complemental strand, 37985088 - 37984974
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||| ||||||||||||||| |  ||||| | ||||||||| ||| ||||||| ||||||  |||||||||||| ||||  || ||||||        
T  37985088 tgcaaatatatgtcatttgatttttcgtctctgaaattactaatccttccaatttgccactgcaaaatttaatcatttgacttttgatcttaattaggtt 37984989  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  37984988 tttttgctgaggtgg 37984974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 41846747 - 41846673
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||| ||||||| ||||| |||||||| | |||| |||| ||| | ||||| |||||||||||||||||||||    
T  41846747 tataggccatttgaattttcgttcctgaagttactactccttccaatctgccactgcaaatattaatcatttgaa 41846673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 583
Target Start/End: Complemental strand, 29958648 - 29958567
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgcc 583  Q
    |||||||||||||  ||||||   || |||||||||   ||||||||||||| |||||||| ||||||||| ||||||||||    
T  29958648 tggcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcc 29958567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 621
Target Start/End: Original strand, 33881580 - 33881693
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||||||||||   || || |||||| |||||||  |||||| ||| |  | | |||| |||||||||||||| ||||||||||||||| || | |    
T  33881580 aaatatgcatttcatccctgtaaatatagggcatttgaaatttcatccctaaggttattaattctcccattttgccactgcaaatattaatcacttcagt 33881679  T
Q  608 tttcgtcctaatta 621  Q
    ||| ||||||||||    
T  33881680 tttggtcctaatta 33881693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 640
Target Start/End: Complemental strand, 17366945 - 17366869
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||||||||| ||| | ||||| ||||||||||||||| |||| |||| ||||||||||    |||||||||||||||    
T  17366945 actaatccttccaatctgccactgcaaatattaatcaattgacttttggtcctaattaggtttttttgctgaggtgg 17366869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 43681879 - 43681963
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaatttt 610  Q
    ||||| |||| ||||||||| ||||| | | | || | ||||||| | ||||||||||| |||||||||||||||||||| ||||    
T  43681879 tgcaaatatatgtcatttgaattttcgtccataaagttactaatcattccattttgccattgcaaatattaatcatttgactttt 43681963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 606
Target Start/End: Complemental strand, 5608954 - 5608875
Alignment:
Q  527 gcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||| ||||| |||||||| ||||| |  || || | |||||||||  |||||||||| |||||||||||||||||||||    
T  5608954 gcaaatatagatcatttgaattttcctctctaaagttactaatcctttcattttgccattgcaaatattaatcatttgaa 5608875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 622
Target Start/End: Original strand, 13646132 - 13646199
Alignment:
Q  555 cctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaa 622  Q
    |||| ||| ||||||||||||| ||||||  ||||||||||||||| || || ||| |||||||||||    
T  13646132 cctgtacttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaattaa 13646199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 622
Target Start/End: Complemental strand, 13652141 - 13652074
Alignment:
Q  555 cctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaa 622  Q
    |||| ||| ||||||||||||| ||||||  ||||||||||||||| || || ||| |||||||||||    
T  13652141 cctgtacttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaattaa 13652074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 618
Target Start/End: Original strand, 43236504 - 43236619
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||| ||   ||||| |||||| |||||||  |||||| |||||||| |||||||||||||      |  |||||||||||||||||    
T  43236504 ggctaaaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctcccaaaccttccctgcaaatattaatcatt 43236603  T
Q  603 tgaattttcgtcctaa 618  Q
    ||| |||| |||||||    
T  43236604 tgagttttggtcctaa 43236619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 4375578 - 4375652
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||||| || | |||||||  ||||| | | ||||||| |||||||||||  ||||||||||||||||||||    
T  4375578 tataggtcaattaaattttcatctctgaaattattaatccttccattttgccatagcaaatattaatcatttgaa 4375652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 10446830 - 10446932
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||  |||| |   ||||| |||||| ||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||    
T  10446830 atggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 10446929  T
Q  601 ttt 603  Q
    |||    
T  10446930 ttt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 610
Target Start/End: Original strand, 41846421 - 41846499
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaatttt 610  Q
    |||||||||||||| ||||| | |||||| | | ||||||| | | | ||||| |||||||||||||||||||| ||||    
T  41846421 tataggtcatttgaattttcgtccctgaagttagtaatccttctaatctgccactgcaaatattaatcatttgactttt 41846499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 576
Target Start/End: Complemental strand, 7983910 - 7983837
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctccca 576  Q
    |||| ||||||||||||||| |  |||| ||||||||||||||  ||||||   |||||| |||||||||||||    
T  7983910 ggctaaaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 605
Target Start/End: Original strand, 19619587 - 19619628
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttga 605  Q
    ||||||||||||||||||||  ||||||||||||| ||||||    
T  19619587 actaatcctcccattttgcccctgcaaatattaattatttga 19619628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 3e-47; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 503 - 731
Target Start/End: Complemental strand, 22736790 - 22736562
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||  ||||||   || ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||  || || || ||||||||    
T  22736790 ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatt 22736691  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    ||||  ||||||||||||| |||  |||||||||||||| ||||||||| ||| |||||  | | || |||  |||||||||||||||||||||||||||    
T  22736690 tgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggtgaatgggattttgtcaggacacatcagcagatggc 22736591  T
Q  703 aattgcaatgacatttttgcccttaatga 731  Q
     || | ||| |||||||||||||||||||    
T  22736590 gatggaaattacatttttgcccttaatga 22736562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 529 - 731
Target Start/End: Original strand, 44476075 - 44476277
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaattt 628  Q
    |||||| || ||||||||||||||| |||||||| ||||||||||||||||||||   | || || ||||||||||||  ||||||||||||| ||| ||    
T  44476075 aattatgggccatttgatttttcatccctgaacttactaatcctcccattttgcccccgtaattactaatcatttgaaaattcgtcctaattacaaaatt 44476174  T
Q  629 ttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgacatttttgcccttaa 728  Q
    ||||||||||||| ||| ||||| ||| |||||  ||| ||||||  ||||| ||||||||||||||||||||  |  | ||||||| ||||||||||||    
T  44476175 ttgctgaggtggagggtgattagctacgtggcacttagtgactggggttttggcaggacacatcagcagatggggagggaaatgacaattttgcccttaa 44476274  T
Q  729 tga 731  Q
    |||    
T  44476275 tga 44476277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 508 - 731
Target Start/End: Complemental strand, 44482048 - 44481825
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || |||||| || ||||||||||||||| | ||| || ||||||||||||||||||||  || || || ||||||||||||     
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 44481949  T
Q  608 tttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattg 707  Q
     ||||||||||||| ||| ||||||||||||||| ||| ||||| ||| |||||  ||| ||||||  ||||| ||||||||||||||||||||  |  |    
T  44481948 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttagtgactggggttttggcaggacacatcagcagatggggaggg 44481849  T
Q  708 caatgacatttttgcccttaatga 731  Q
     ||||||| |||||||||||||||    
T  44481848 aaatgacaattttgcccttaatga 44481825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 547 - 731
Target Start/End: Original strand, 22735403 - 22735587
Alignment:
Q  547 ttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtggatggta 646  Q
    ||||||| ||| | || ||||||||||||||||||||  || || || ||||||||||||  ||||||||||||| |||  |||||||||||||| ||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggta 22735502  T
Q  647 attagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgacatttttgcccttaatga 731  Q
    ||||| ||| |||||  | | || |||  ||||||||||||||||||| ||||| | || | |||||||||||||||||||||||    
T  22735503 attagctacgtggcatttggtgaatggggttttgtcaggacacatcagaagatgacgatggaaatgacatttttgcccttaatga 22735587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 32717205 - 32717093
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||  || ||| ||||||||||    
T  32717205 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcatt 32717106  T
Q  603 tgaattttcgtcc 615  Q
    | || ||||||||    
T  32717105 taaaatttcgtcc 32717093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 504 - 640
Target Start/End: Complemental strand, 10998256 - 10998120
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||  |||| | | ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  ||||||||||||||||||    
T  10998256 gcttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10998157  T
Q  604 gaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    || |||| ||| ||||||||  |||||||||||||||    
T  10998156 gacttttggtcataattaaatttttttgctgaggtgg 10998120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 29192035 - 29192147
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   || ||||||||| ||||||||||||||||||||| || ||||||||| || |||||||  || ||| ||||||||||    
T  29192035 ggctgaaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatt 29192134  T
Q  603 tgaattttcgtcc 615  Q
    | || ||||||||    
T  29192135 taaaatttcgtcc 29192147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 526 - 638
Target Start/End: Complemental strand, 55037030 - 55036918
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||| ||| |||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| |||||||||| |      
T  55037030 tgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcatttgatttttggtcctaattagatt 55036931  T
Q  626 tttttgctgaggt 638  Q
    |||||||||||||    
T  55036930 tttttgctgaggt 55036918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 640
Target Start/End: Original strand, 1741410 - 1741524
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||        
T  1741410 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcctaattaggtt 1741509  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  1741510 tttttgctgaggtgg 1741524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 502 - 615
Target Start/End: Complemental strand, 45279385 - 45279272
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || |||||||    
T  45279385 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 45279286  T
Q  602 ttgaattttcgtcc 615  Q
    |||||  |||||||    
T  45279285 ttgaaagttcgtcc 45279272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 29193093 - 29193017
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattt 579  Q
    ||||||||||||||||||||   || ||||||||| ||||||||||||||| ||||| || ||||||||||||||||    
T  29193093 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattt 29193017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 55036692 - 55036787
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| |||||||||||||| | ||||||||| ||| | ||||  |||||||||||||||||| |  ||| ||||||||||    
T  55036692 tgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaacctttggtcctaatta 55036787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 615
Target Start/End: Complemental strand, 11026733 - 11026620
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| || |||||| ||||||||||  || || || |||||||    
T  11026733 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcat 11026634  T
Q  602 ttgaattttcgtcc 615  Q
    |||||  |||||||    
T  11026633 ttgaaagttcgtcc 11026620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 2944766 - 2944654
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||  ||||||||||  || || || ||||||||    
T  2944766 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatt 2944667  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  2944666 tgaaagttcgtcc 2944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 11312764 - 11312872
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | |||||| | || ||||||  || | ||||  |||||||||||||||||||| |||| |||||||||| |  ||||||    
T  11312764 tataggtcatttgaattttcgtccctgaagttaccaatccttgcagtctgcccctgcaaatattaatcatttgacttttggtcctaattagatttttttg 11312863  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  11312864 ctgaggtgg 11312872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 533 - 621
Target Start/End: Complemental strand, 24576649 - 24576561
Alignment:
Q  533 ataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||| |||| |||||||   |||| | ||||||||| ||| | ||||| ||||||||||||||||||||||||| ||||||||||    
T  24576649 ataggtcagttgaattttcatctttgaaattactaatccttccaatctgccagtgcaaatattaatcatttgaattttggtcctaatta 24576561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 621
Target Start/End: Original strand, 40256896 - 40256992
Alignment:
Q  525 atgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||| ||||||| |||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  40256896 atgcaaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttgacttttggtcctaatta 40256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 48189199 - 48189087
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| | ||||||||||||| ||||| || ||||||||| ||||||||||  || || || ||||||||    
T  48189199 ggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatcatt 48189100  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  48189099 tgaaagttcgtcc 48189087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 621
Target Start/End: Complemental strand, 30804197 - 30804114
Alignment:
Q  538 tcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||| ||||| |||||||| | ||||||||| ||| | || || |||||||||||||||||||| |||| ||||||||||    
T  30804197 tcatttgaattttcgttcctgaagttactaatccttccaatctgtcactgcaaatattaatcatttgacttttggtcctaatta 30804114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 615
Target Start/End: Original strand, 37249204 - 37249311
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   |||||||||||| | ||||||||||||| ||||| || | ||||||||||||||||||  || || || ||||||||||||     
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  37249304 gttcgtcc 37249311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 603
Target Start/End: Complemental strand, 46670610 - 46670539
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||||| ||||||| |||||| | |||||| || |||||||| || ||||||||||||||||||    
T  46670610 tataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcattt 46670539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 615
Target Start/End: Original strand, 48188404 - 48188490
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||||||  |||||||    
T  48188404 aattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 48188490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 564 - 621
Target Start/End: Original strand, 22129067 - 22129124
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||||| ||| ||||||  |||||||||||||||||||| |||||||||||||||    
T  22129067 actaatccttccaatttgcccctgcaaatattaatcatttgacttttcgtcctaatta 22129124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 526 - 615
Target Start/End: Complemental strand, 37249875 - 37249786
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    |||||||||||| | ||||||||||||| ||||| || ||||||||||||||| ||||  || || || ||||||||||||  |||||||    
T  37249875 tgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaagttcgtcc 37249786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 606
Target Start/End: Complemental strand, 1757404 - 1757301
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||  ||||||   || ||||||||| | ||||||||||||| | |||||| ||||||||| ||||||||||  || || || ||||||||    
T  1757404 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 1757305  T
Q  603 tgaa 606  Q
    ||||    
T  1757304 tgaa 1757301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 534 - 621
Target Start/End: Complemental strand, 22129362 - 22129275
Alignment:
Q  534 taggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||||||| ||||| | |||||| | ||||||||| | | ||||||  ||||||||||||| |||||| |||| ||||||||||    
T  22129362 taggtcatttgaattttcgtccctgaagttactaatccttcaaatttgcctctgcaaatattaataatttgacttttggtcctaatta 22129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 33458279 - 33458184
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| || || | |||||| | ||||||||| | | | || || |||||||||||||||||||| |||| ||||||||||    
T  33458279 tgcaaatataggtcatttgaattgtcgtccctgaagttactaatccttctaatctgtcactgcaaatattaatcatttgacttttggtcctaatta 33458184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 615
Target Start/End: Original strand, 45278549 - 45278656
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || ||||||||| | ||||||||||||| |||||| | ||||||||| ||||||||||  || || || ||||||||||||     
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  45278649 gttcgtcc 45278656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 615
Target Start/End: Original strand, 1756576 - 1756662
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    ||||||||| | ||||||||||||| | |||||| ||||||||| ||||||||||  || || || ||||||||||||  |||||||    
T  1756576 aattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 1756662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 615
Target Start/End: Complemental strand, 43105908 - 43105822
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    ||||||||| | ||||||||||||| |||||||| |||||||||  |||||||||  || || || ||||||||||||  |||||||    
T  43105908 aattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtcc 43105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 615
Target Start/End: Original strand, 2943937 - 2944025
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    |||||||||||| | ||||||||||||| ||||| || ||||||||||| ||||||||  || |||  |||||||||||||  |||||||    
T  2943937 tgcaattataggccgtttgatttttcat-cctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttgaaagttcgtcc 2944025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 641
Target Start/End: Original strand, 21300210 - 21300271
Alignment:
Q  580 tgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgga 641  Q
    |||| ||||||||||||||||||||| |||| ||||||||||    ||||||||||||||||    
T  21300210 tgcccatgcaaatattaatcatttgattttttgtcctaattaggtttttttgctgaggtgga 21300271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 606
Target Start/End: Complemental strand, 28310708 - 28310629
Alignment:
Q  527 gcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||| |||||||||||||| | |||   ||| || | ||||||| | ||||||||||| |||||||||||||||||||||    
T  28310708 gcaaatataggtcatttgaatcttcgaccctaaagttactaatctttccattttgccattgcaaatattaatcatttgaa 28310629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 51279254 - 51279349
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| ||||||| |||||| ||||| | || ||| | ||||||| |  || ||||||  |||||||||||||||||||| |||| ||||||||||    
T  51279254 tgcaaatataggttatttgaattttcgtcccagaagttactaatcatttcaatttgcccctgcaaatattaatcatttgacttttagtcctaatta 51279349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 11025975 - 11026017
Alignment:
Q  541 tttgatttttcattcctgaactgactaatcctcccattttgcc 583  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||    
T  11025975 tttgatttttcatccctgaacttactaatccttccattttgcc 11026017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 30890236 - 30890310
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||| |||||||  ||||| | ||||||| | | ||||||||| || ||||||||||||||||||    
T  30890236 tatagatcatttgaattttcatctctgaagttactaatctttctattttgccattgtaaatattaatcatttgaa 30890310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 618
Target Start/End: Complemental strand, 30890562 - 30890476
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaa 618  Q
    |||||||||||||| ||||||| |||||| | ||||||| |  || | ||||| ||||||  |||||||||||| |||| |||||||    
T  30890562 tataggtcatttgaattttcatccctgaagttactaatcttttcaatctgccactgcaaaatttaatcatttgactttttgtcctaa 30890476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 583
Target Start/End: Original strand, 43105259 - 43105313
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgcc 583  Q
    ||||||||| | ||||||||||||| |||||||| |||||||||  |||||||||    
T  43105259 aattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcc 43105313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 7e-45; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 503 - 731
Target Start/End: Original strand, 37284109 - 37284337
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||  ||||| || ||||||||    
T  37284109 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatt 37284208  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    | ||  ||||||||||||| |||  |||| ||||||||| ||||||||||||| |||||  | | || |||  |||||||||||||| ||||||||||||    
T  37284209 ttaaaattcgtcctaattacaaaaatttgttgaggtggagggtaattagatacgtggcatttggtgaatggagttttgtcaggacacgtcagcagatggc 37284308  T
Q  703 aattgcaatgacatttttgcccttaatga 731  Q
     |  | |||||||||||||||||||||||    
T  37284309 gagggaaatgacatttttgcccttaatga 37284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 503 - 763
Target Start/End: Complemental strand, 37289410 - 37289150
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| |||||| |||||||| ||||| || ||||||||||||||||||||  ||||| || ||||||||    
T  37289410 ggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatt 37289311  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    | ||  ||||||||||||| |||  |||| ||||||||| ||||||||||||| |||||  | | || |||  |||||||||||||| ||||| ||||||    
T  37289310 ttaaaattcgtcctaattacaaaaatttgttgaggtggagggtaattagatacgtggcatttggtgaatggagttttgtcaggacacgtcagctgatggc 37289211  T
Q  703 aattgcaatgacatttttgcccttaatgaatcaagactcgcgtgcaaagactattttaccc 763  Q
     |  | |||||||||||| |||||||||| ||  || ||||| |||| ||| |||||||||    
T  37289210 gagggaaatgacatttttacccttaatgagtctggaatcgcgcgcaatgaccattttaccc 37289150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 503 - 621
Target Start/End: Original strand, 12930772 - 12930890
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||  |||||||||||||||||    
T  12930772 ggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatt 12930871  T
Q  603 tgaattttcgtcctaatta 621  Q
    ||| |||| ||||||||||    
T  12930872 tgacttttggtcctaatta 12930890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 503 - 621
Target Start/End: Original strand, 12929287 - 12929405
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   ||||| ||||||  |||||||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||||    
T  12929287 ggcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 12929386  T
Q  603 tgaattttcgtcctaatta 621  Q
    ||| |||| ||||||||||    
T  12929387 tgacttttggtcctaatta 12929405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 503 - 605
Target Start/End: Original strand, 7158231 - 7158333
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   | |||||||||| ||||||||||||||| | |||||| ||||||||| ||||||||||  || ||||||||||||||    
T  7158231 ggcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcatt 7158330  T
Q  603 tga 605  Q
    |||    
T  7158331 tga 7158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 526 - 619
Target Start/End: Complemental strand, 7159289 - 7159197
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaat 619  Q
    ||||| ||||| |||||||| ||||| |||||||| | ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  7159289 tgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccattttaccc-tgcaaatattaatcatttgaattttcgtcctaat 7159197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 12643100 - 12643212
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||| |||||||||||||||  |||| || ||||||||||||||||| ||  |||||| ||||| ||||    
T  12643100 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaaccatt 12643199  T
Q  603 tgaattttcgtcc 615  Q
    | || ||||||||    
T  12643200 taaaatttcgtcc 12643212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 651
Target Start/End: Complemental strand, 31695714 - 31695566
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||| ||||||||||||||  |||||| ||| |||| ||||||||| |||||||  |  ||||| | ||||||| |    
T  31695714 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcact 31695615  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattag 651  Q
    |||| ||| |||||||| | |  |||||||||||||||| |||||||||    
T  31695614 tgaaatttggtcctaatcacatttttttgctgaggtggagggtaattag 31695566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 603
Target Start/End: Original strand, 38643550 - 38643650
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||||| ||||||||||||||| | ||| || |||||||||||||||||||   || ||| ||||||||||    
T  38643550 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcatt 38643649  T
Q  603 t 603  Q
    |    
T  38643650 t 38643650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 43937923 - 43938031
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||||| |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||| |||||| |  ||||||    
T  43937923 tataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcataattagatttttttg 43938022  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  43938023 ctgaggtgg 43938031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 502 - 603
Target Start/End: Complemental strand, 38644761 - 38644660
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| || ||| | || | ||||||| |||||||| |  || ||| |||||||||    
T  38644761 tggcttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatcat 38644662  T
Q  602 tt 603  Q
    ||    
T  38644661 tt 38644660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 4227272 - 4227160
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||| ||||||||||||||| | ||| || |||||||||||||||||| |  || ||| ||||| ||||    
T  4227272 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccatt 4227173  T
Q  603 tgaattttcgtcc 615  Q
    | || ||||||||    
T  4227172 taaaatttcgtcc 4227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 47558030 - 47558142
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||||||||||||||||||| | |  |||||||||  |||||||||||||| |||||  | ||||||||||||||||||||  || ||| ||||| ||||    
T  47558030 ggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccatt 47558129  T
Q  603 tgaattttcgtcc 615  Q
    | || ||||||||    
T  47558130 taaaatttcgtcc 47558142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 12931099 - 12931004
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| ||| |||||||||| ||||| | |||||| | ||||||||| ||| | |||| ||||||||||||||||||||| |||| ||||||||||    
T  12931099 tgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttgacttttggtcctaatta 12931004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 27558213 - 27558118
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |  ||| | ||||||||| ||||||||||| |||||||||||||||||||| ||||  |||||||||    
T  27558213 tgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttgacttttgatcctaatta 27558118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 547 - 621
Target Start/End: Complemental strand, 26830081 - 26830007
Alignment:
Q  547 ttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||||| |||| | ||||||||| ||||||||||| |||||||||||||||||| |||||  ||||||||||    
T  26830081 ttttcattcatgaagttactaatccttccattttgccactgcaaatattaatcattttaatttcagtcctaatta 26830007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 640
Target Start/End: Original strand, 37563377 - 37563491
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| |||||| ||||||| ||||| | |||||| | ||||||||| | | | ||||  |||||||||||||||||||| |||| |||||||||| |      
T  37563377 tgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcatttgacttttggtcctaattagatt 37563476  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  37563477 tttttgctgaggtgg 37563491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 616
Target Start/End: Original strand, 4226125 - 4226238
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||| ||||||||| ||||  | ||| || ||||||||| ||||||||||  || ||| ||||||||||    
T  4226125 ggcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcatt 4226224  T
Q  603 tgaattttcgtcct 616  Q
    | || |||||||||    
T  4226225 taaaatttcgtcct 4226238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 615
Target Start/End: Original strand, 27479978 - 27480099
Alignment:
Q  494 ttaagttatggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaata 593  Q
    |||||||  ||||||||||||| ||||||   |||||||||||| |  |||||||||||| ||||| || ||||||||||| ||||||||  || || ||    
T  27479978 ttaagtttcggcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaatta 27480077  T
Q  594 ttaatcatttgaattttcgtcc 615  Q
     ||||||||||||  |||||||    
T  27480078 ctaatcatttgaaagttcgtcc 27480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 45914526 - 45914636
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||||||||||||||||||| | || ||||||||| ||||||||||||||| ||| | || |||||| ||| |||||||||  || ||| ||||||||||    
T  45914526 ggcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttgcc-ctgtaaaaattaatcatt 45914623  T
Q  603 tgaattttcgtcc 615  Q
    | || ||||||||    
T  45914624 taaaatttcgtcc 45914636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 603
Target Start/End: Complemental strand, 45915908 - 45915808
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||| ||||||||||||||| ||| | || ||||||||||| ||||| ||  || ||| ||||||||||    
T  45915908 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcatt 45915809  T
Q  603 t 603  Q
    |    
T  45915808 t 45915808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 615
Target Start/End: Complemental strand, 12644232 - 12644121
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||||||||||   |  ||||| ||| ||||||||||||||| ||||| || ||||||||||||||||| |   || ||| |||||||||||    
T  12644232 gcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcattt 12644133  T
Q  604 gaattttcgtcc 615  Q
     || ||||||||    
T  12644132 aaaatttcgtcc 12644121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 12929615 - 12929520
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| ||| |||||||||| ||| | | |||||| ||||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  12929615 tgcaaatattggtcatttgaatttccgtccctgaagtgactaatccttccaatctgcccgtgcaaatattaatcatttgacttttggtcctaatta 12929520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 19979980 - 19980053
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||||| |||||| | ||||||| | ||||||||||  |||||||||||||||||||||    
T  19979980 tataggtcatttgaattttcat-cctgaagttactaatcattccattttgccgttgcaaatattaatcatttgaa 19980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 40021489 - 40021607
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    |||||| |||||||||||||||   || || ||||||||||||||  |||||| | | ||||  ||||| || | ||||||||| |||||||||||| ||    
T  40021489 atggctaaaatatgcatttcatccctgtaaatataggtcatttgaaatttcatccataaacttgctaattcttctattttgccactgcaaatattaaaca 40021588  T
Q  601 tttgaattttcgtcctaat 619  Q
    ||||||  |||||||||||    
T  40021589 tttgaaaattcgtcctaat 40021607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 5636049 - 5636128
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | ||| || | ||||||||| |||||| |||| |||||||||||||||||||||    
T  5636049 tgcaaatataggtcatttgaattttcgtccctaaagttactaatccttccattt-gccattgcaaatattaatcatttgaa 5636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 640
Target Start/End: Original strand, 31694476 - 31694608
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||||||||||   ||||| |||||  |||||||  |||||| ||| || | ||||||||||||||| |  | |||||| | ||||||| |||||     
T  31694476 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcacttgaaa 31694575  T
Q  608 tttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||| |||||||||| |  |||||||||||||||    
T  31694576 tttggtcctaattacatttttttgctgaggtgg 31694608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 615
Target Start/End: Original strand, 22661362 - 22661469
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || ||||||||| | ||||||||||||| | |||||| ||||||||| ||||||||||  || || || ||||||||||||     
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  22661462 gttcgtcc 22661469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 639
Target Start/End: Original strand, 26825659 - 26825766
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | |||||| | ||||||| | ||| | ||||  |||||| ||||||||||||| |||| ||| |||||| |  ||||||    
T  26825659 tataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaatcatttgacttttggtcttaattagatttttttg 26825758  T
Q  632 ctgaggtg 639  Q
    ||||||||    
T  26825759 ctgaggtg 26825766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 619
Target Start/End: Complemental strand, 37563709 - 37563622
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaat 619  Q
    |||||| ||||||| ||||| | |||||| | ||||||||| ||| ||||||  |||||||||||||| ||||| |||| ||||||||    
T  37563709 tataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcttttgacttttggtcctaat 37563622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 43938255 - 43938160
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| | ||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  43938255 tgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 43938160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 27557877 - 27557951
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||| | | |||| | | |||| || ||||||||||| |||||||||||||||||||||    
T  27557877 tataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaa 27557951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 605
Target Start/End: Complemental strand, 40022628 - 40022527
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| ||||||| |||||||   ||||| ||||| ||||||||  |||||| ||||| || ||||||||| |||||||| || |||||||||||| ||||    
T  40022628 ggctaaaatatgtatttcatccctgcaaatatag-tcatttgaaatttcatccctgatcttactaatccttccattttgtcactgcaaatattaagcatt 40022530  T
Q  603 tga 605  Q
    |||    
T  40022529 tga 40022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 47081876 - 47081984
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||| ||||||||| |||||||  ||||| | |||||||||  || | ||||| || ||||||||||||||||| |||| ||| ||||||    ||||||    
T  47081876 tatatgtcatttgaattttcatctctgaagttactaatcctttcaatctgccattgtaaatattaatcatttgatttttggtcttaattaggtttttttg 47081975  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  47081976 ctgaggtgg 47081984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 603
Target Start/End: Original strand, 26828504 - 26828575
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||| ||||| ||||||| ||| ||   ||||||||| ||||||| ||| ||||||||||||||||||    
T  26828504 tataggtcgtttgaattttcatccctaaaagtactaatccttccattttaccactgcaaatattaatcattt 26828575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 20947222 - 20947296
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||| | |||||||||||||||||||    
T  20947222 tataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccactacaaatattaatcatttgaa 20947296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 537 - 603
Target Start/End: Complemental strand, 44545945 - 44545879
Alignment:
Q  537 gtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    ||||||||| ||||| | |||||| | ||||||||| | ||||| ||| ||||||||||||||||||    
T  44545945 gtcatttgaattttcgtccctgaagttactaatccttcaattttaccattgcaaatattaatcattt 44545879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 564 - 622
Target Start/End: Complemental strand, 47739036 - 47738978
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaa 622  Q
    ||||||||||||| ||||||  ||||||||||||||| || || ||| |||||||||||    
T  47739036 actaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaattaa 47738978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 621
Target Start/End: Complemental strand, 23191161 - 23191120
Alignment:
Q  580 tgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||||||||| |||| ||||||||||    
T  23191161 tgccactgcaaatattaatcatttgacttttggtcctaatta 23191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 90; Significance: 4e-43; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 503 - 644
Target Start/End: Original strand, 261001 - 261142
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||| | |||| | ||||||||||||||||||||  |||||||||||||||||    
T  261001 ggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcatt 261100  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatgg 644  Q
    |||||||||| ||||||||||||  |||||| ||||||||||    
T  261101 tgaattttcgacctaattaaaaaaatttgcttaggtggatgg 261142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 503 - 619
Target Start/End: Complemental strand, 262541 - 262425
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||  |||||||||||||||||    
T  262541 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcatt 262442  T
Q  603 tgaattttcgtcctaat 619  Q
    | ||||||| |||||||    
T  262441 taaattttcatcctaat 262425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 261142 - 261186
Alignment:
Q  746 gcaaagactattttacccatatcttcttccctcactctccttctc 790  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  261142 gcaaagaccattttacccatatcttcttccctcattctccttctc 261186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 503 - 763
Target Start/End: Original strand, 13134 - 13394
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || || |||||  |||||||||||||||  ||||  | | ||||||||||||||||||  ||||| || ||||||||    
T  13134 ggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctgcaattactaatcatt 13233  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    ||||  |||||||||||||||||   ||||||||||||| ||||||||||||| ||||| || |||| ||| ||||| ||||||||| |||||||| ||     
T  13234 tgaaaattcgtcctaattaaaaaaaattgctgaggtggagggtaattagatacgtggcatctggcgaatggttttttttcaggacacgtcagcagaaggg 13333  T
Q  703 aattgcaatgacatttttgcccttaatgaatcaagactcgcgtgcaaagactattttaccc 763  Q
     |  ||||||||||||||||||||||||||||  |||||  | |||| ||| |||||||||    
T  13334 gagggcaatgacatttttgcccttaatgaatctggactcatgcgcaatgaccattttaccc 13394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 503 - 698
Target Start/End: Complemental strand, 14477 - 14283
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| |||||    || ||||||||| ||||||||||||||| ||||| || ||||||||||||||||| ||  ||||| || ||||||||    
T  14477 ggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttacccctgcaattactaatcatt 14378  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcaga 698  Q
    ||||  ||| |||||||||||||    |||||||||||| ||||||||||||  ||||| ||  ||| ||| ||||||||||||||| ||||||||    
T  14377 tgaaaattcatcctaattaaaaa-aaatgctgaggtggagggtaattagatatgtggcatctgacgaatggttttttgtcaggacacgtcagcaga 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 1e-37; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 502 - 734
Target Start/End: Complemental strand, 51935300 - 51935068
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||| ||||||  ||| ||||||| ||||||||||||||||| ||||| ||  |||||||||||||||||||  ||||| || |||||||    
T  51935300 tggcttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgcccctgcaattactaatcat 51935201  T
Q  602 ttgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatgg 701  Q
    |||||  |||||||||||||||||    |||||||||||| |||||||||||||||||||  |   || ||| ||||| ||||||||| ||||| || ||    
T  51935200 ttgaaaattcgtcctaattaaaaaaaaatgctgaggtggagggtaattagatacatggcatatgatgaatggttttttatcaggacacgtcagccgaagg 51935101  T
Q  702 caattgcaatgacatttttgcccttaatgaatc 734  Q
      |   ||| |||||||||||| ||||||||||    
T  51935100 ggaggacaacgacatttttgccattaatgaatc 51935068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 508 - 731
Target Start/End: Original strand, 32619389 - 32619612
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || |||||| || ||||||||||||||| ||||| || ||||||||||||||||||||  || || || ||||||||||||     
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 32619488  T
Q  608 tttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattg 707  Q
     ||||||||||||| ||| ||||||||||||||| ||| ||||| ||| |||||  | | ||||||  ||||| ||||||||||||||||||||  |  |    
T  32619489 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggaggg 32619588  T
Q  708 caatgacatttttgcccttaatga 731  Q
     ||||||| |||||||||||||||    
T  32619589 aaatgacaattttgcccttaatga 32619612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 503 - 644
Target Start/End: Original strand, 2828193 - 2828334
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   ||||||||||| |||||||||||||||| | | |||| ||||||||| | ||||||||  |||||||||||||||||    
T  2828193 ggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcatt 2828292  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatgg 644  Q
    |||||||||||| ||||||||||  |||||| ||||||||||    
T  2828293 tgaattttcgtcttaattaaaaaaatttgcttaggtggatgg 2828334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 529 - 731
Target Start/End: Complemental strand, 32622430 - 32622228
Alignment:
Q  529 aattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaattt 628  Q
    |||||| || ||||||||||||||| ||||| || ||||||||||||||||||||  || || || |||| |||||||  |||||| |||||| ||| ||    
T  32622430 aattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaataatttgaaaattcgtcataattacaaaatt 32622331  T
Q  629 ttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggcaattgcaatgacatttttgcccttaa 728  Q
    ||||||||||||| ||| ||||| ||| |||||  | | ||||||  ||||| ||||||||||||||||||||  |  | ||||||| ||||||||||||    
T  32622330 ttgctgaggtggagggtgattagctacgtggcacttggtgactggggttttggcaggacacatcagcagatggggagggaaatgacaattttgcccttaa 32622231  T
Q  729 tga 731  Q
    |||    
T  32622230 tga 32622228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 503 - 690
Target Start/End: Original strand, 32238699 - 32238888
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||| ||||||  ||||||  |||||| |||||||| ||||||||||||||||||||  || |||| |||| ||||    
T  32238699 ggctaaaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcctctgtaaatgttaagcatt 32238798  T
Q  603 tgaattttcgtcctaatt--aaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacaca 690  Q
    | ||  ||||||||||||  |||||    |||||||||||||||||||||||||| |||||||  | |||||  |||| |||||||||||    
T  32238799 tcaaaattcgtcctaattaaaaaaaaaactgctgaggtggatggtaattagatacgtggcaaccggtgactgagttttggtcaggacaca 32238888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 508 - 632
Target Start/End: Original strand, 6344260 - 6344384
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||||||||||   || |||||  ||||||||||  |||||| | |||||| ||||||||||||||||||||  |||||||||||| ||||||||     
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacatttgaaa 6344359  T
Q  608 tttcgtcctaattaaaaatttttgc 632  Q
    ||| ||| ||||||| |||||||||    
T  6344360 tttggtcataattaagaatttttgc 6344384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 503 - 621
Target Start/End: Complemental strand, 6345737 - 6345619
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||||||  ||||||||||  |||||| |||||||| ||||||||| ||||||||||  |||||||||||| ||||    
T  6345737 ggctaaaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatt 6345638  T
Q  603 tgaattttcgtcctaatta 621  Q
    | || ||| ||||||||||    
T  6345637 taaaatttagtcctaatta 6345619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 10019728 - 10019654
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||||| |||||| | ||||||||| ||||||||||| |||||||||||||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaa 10019654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 619
Target Start/End: Complemental strand, 2829645 - 2829523
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgat-------ttttcattcctgaactgactaatcctcccattttgccaatgcaaatatta 596  Q
    |||||||||||||||||||   | |||||||||||||||||||       ||||||| | ||| || ||||||||||||||||| ||  |||||||||||    
T  2829645 gcttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatatta 2829546  T
Q  597 atcatttgaattttcgtcctaat 619  Q
    |||||||||||||||||| ||||    
T  2829545 atcatttgaattttcgtcataat 2829523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 502 - 640
Target Start/End: Complemental strand, 29043140 - 29043002
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||  |||| | | ||||| |||||| ||||||| ||||| | |||||| | |||||||||  || | ||||  ||||||||||||||||    
T  29043140 tggcttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcat 29043041  T
Q  602 ttgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    |||| ||||  |||||||||||  |||||||||||||||    
T  29043040 ttgacttttgatcctaattaaatttttttgctgaggtgg 29043002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 615
Target Start/End: Original strand, 46282069 - 46282183
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||  ||||||   || ||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||    
T  46282069 atggcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 46282168  T
Q  601 tttgaattttcgtcc 615  Q
    ||||||  |||||||    
T  46282169 tttgaaagttcgtcc 46282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 503 - 619
Target Start/End: Complemental strand, 28534896 - 28534780
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatatt-aatcat 601  Q
    |||||||||||||||||| ||  || || |||||| |||||||  |||||| |||||||| ||||||||| ||||||| ||  |||||||||| ||||||    
T  28534896 ggcttaaatatgcatttcgttc-tgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccattttacctctgcaaatattaaatcat 28534798  T
Q  602 ttgaattttcgtcctaat 619  Q
    |||||||||| |||||||    
T  28534797 ttgaattttcatcctaat 28534780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 603
Target Start/End: Original strand, 13295135 - 13295235
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||||||||||||||||||    || ||||||||||||||||||||||||  ||||| || ||||||||| ||||||||||  || ||| ||||||||||    
T  13295135 ggcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcatt 13295234  T
Q  603 t 603  Q
    |    
T  13295235 t 13295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 578
Target Start/End: Original strand, 25064936 - 25065008
Alignment:
Q  506 ttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccatt 578  Q
    |||||||||||||||||   ||||||||||||| |||||||||||||| ||||| || |||||||||||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccatt 25065008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 49093041 - 49093153
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||||||| |||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| |||||||||| ||| || || ||||||||    
T  49093041 ggcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatt 49093140  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  49093141 tgaaagttcgtcc 49093153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 2953825 - 2953730
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  2953825 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgatttttggtcctaatta 2953730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 19755766 - 19755671
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| |||| || |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  19755766 tgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 19755671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 29980999 - 29980904
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | || ||| | ||||||||| ||| ||||||  |||||||||||||||||||| |||| ||||||||||    
T  29980999 tgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatttgatttttggtcctaatta 29980904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 46850019 - 46849924
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||| ||||| ||| ||||||  |||||||||||||||||||| |||| ||||||||||    
T  46850019 tgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 46849924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 46545086 - 46545012
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||||||||||  |||| | |||||| | ||||||||| ||||||||||| |||||||||||||||||||||    
T  46545086 tataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaa 46545012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 503 - 621
Target Start/End: Original strand, 52563651 - 52563769
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||| ||||||  |||||   |||||| | |||  | ||||||||||||||||||||| ||||||||||||||| |    
T  52563651 ggctaaaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgccactgcaaatattaatcact 52563750  T
Q  603 tgaattttcgtcctaatta 621  Q
    ||| |||| ||||||||||    
T  52563751 tgagttttggtcctaatta 52563769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 640
Target Start/End: Complemental strand, 1047588 - 1047451
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||  ||||||   || || |||||||||||||| ||||| |  ||||| | ||||||||| ||| | ||||  |||||||||||||||||    
T  1047588 ggcttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 1047489  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtgg 640  Q
    ||| |||| |||||||||| |  |||| ||||||||||    
T  1047488 tgacttttggtcctaattagattttttagctgaggtgg 1047451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 5183535 - 5183643
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | | | || | ||||||||| ||| | ||||  |||||||||||||||||||| |||| |||||||||| |  ||||||    
T  5183535 tataggtcatttgaattttcgtccataaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaattagatttttttg 5183634  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  5183635 ctgaggtgg 5183643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 5183867 - 5183772
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | || |||||| ||| ||||||  |||||||||||||||||||| |||| ||||||||||    
T  5183867 tgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 5183772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 33347777 - 33347682
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  33347777 tgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcctaatta 33347682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 615
Target Start/End: Complemental strand, 46282888 - 46282781
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||||||     
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  46282788 gttcgtcc 46282781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 49002899 - 49002994
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  49002899 tgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 49002994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 49003236 - 49003141
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  49003236 tgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgcaaatattaatcatttgatttttggtcctaatta 49003141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 615
Target Start/End: Complemental strand, 50063043 - 50062936
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||||||     
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  50062943 gttcgtcc 50062936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 490 - 639
Target Start/End: Complemental strand, 739615 - 739466
Alignment:
Q  490 taatttaagttatggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgca 589  Q
    |||||||| ||| ||||||||||||  |||| | | ||||| |||||||||||||| ||||| | | |||| | |||||||||  || | || |  ||||    
T  739615 taatttaatttagggcttaaatatgattttcgtctctgcaaatataggtcatttgaattttcgtacatgaagttactaatcctttcaatctgtccctgca 739516  T
Q  590 aatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtg 639  Q
    |||||||||||||||| ||||  |||||||||    ||||||||||||||    
T  739515 aatattaatcatttgacttttgatcctaattaggtttttttgctgaggtg 739466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 2828334 - 2828378
Alignment:
Q  746 gcaaagactattttacccatatcttcttccctcactctccttctc 790  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  2828334 gcaaagaccattttacccatatcttcttccctcattctccttctc 2828378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 2953493 - 2953601
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | ||| || | |||||||||  || | ||||  |||||||||||||||||||| |||| ||| |||||| |  ||||||    
T  2953493 tataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggtcataattagatttttttg 2953592  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  2953593 ctgaggtgg 2953601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 640
Target Start/End: Original strand, 37152567 - 37152675
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||||||||||| ||||| | | |||| | ||||||||| ||| | ||||  |||||||| ||||||||||| ||||  ||||||||| |  ||||||    
T  37152567 tataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccgtgcaaatactaatcatttgacttttgatcctaattagatttttttg 37152666  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  37152667 ctgaggtgg 37152675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 5926542 - 5926637
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||| ||||||||||||| |||| ||| ||||||    
T  5926542 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttgacttttggtcttaatta 5926637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 639
Target Start/End: Original strand, 25414873 - 25414980
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||| ||||||| ||||| |  ||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    ||||||    
T  25414873 tataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaattaggtttttttg 25414972  T
Q  632 ctgaggtg 639  Q
    ||||||||    
T  25414973 ctgaggtg 25414980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 621
Target Start/End: Complemental strand, 26953449 - 26953367
Alignment:
Q  539 catttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||| |||||||||||||| | |||||| || ||| | |||   |||||||||||||||||||| |||| ||||||||||    
T  26953449 catttgaattttcattcctgaagttactaattcttccaatctgctcttgcaaatattaatcatttgacttttggtcctaatta 26953367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 615
Target Start/End: Complemental strand, 49093875 - 49093801
Alignment:
Q  541 tttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcc 615  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||||||  |||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 49093801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 603
Target Start/End: Complemental strand, 25066055 - 25065958
Alignment:
Q  506 ttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||||||||   |  ||||||| | ||||||||||||||| ||||| || ||||||||| ||||||| ||  || ||| |||||||||||    
T  25066055 ttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcattt 25065958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 564 - 621
Target Start/End: Complemental strand, 30830454 - 30830397
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||| | ||||||||||| ||||||||||||||||||||| | | ||||||||||    
T  30830454 actaatcattccattttgccattgcaaatattaatcatttgaaatatggtcctaatta 30830397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 575
Target Start/End: Complemental strand, 13295680 - 13295608
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctccc 575  Q
    ||||||||||||||||||||   || ||||||||| |||||||||||||||  |||| || ||||| ||||||    
T  13295680 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 24701630 - 24701550
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||| | ||||||| ||||| | |||||| | ||||||||| ||||||||||| | |||||||||| ||||||||    
T  24701630 tgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgccattacaaatattaaccatttgaa 24701550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 540 - 636
Target Start/End: Original strand, 26953138 - 26953234
Alignment:
Q  540 atttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgag 636  Q
    |||||| ||||| | |||||| | |||||||||  || | ||||  |||||||||||||||||||| |||| |||||||||| |  |||||||||||    
T  26953138 atttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggtcctaattagatttttttgctgag 26953234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 33030357 - 33030437
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | |||||| | |||||| || ||| | ||||| ||||||||| |||||||||||    
T  33030357 tgcaaatataggtcatttgaattttcgtccctgaagttactaattcttccaatctgccactgcaaatatgaatcatttgaa 33030437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 739242 - 739337
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||  ||||||| ||||| | | |||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  739242 tgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcctaatta 739337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 1040321 - 1040416
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| | ||||||| ||||  | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  1040321 tgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 1040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 1047227 - 1047322
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| | ||||||| ||||  | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  1047227 tgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 1047322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 5926882 - 5926787
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||  ||||||| ||||||| |||||| | ||||||||  ||| | ||||  |||||||| ||||||||||| |||| ||||||||||    
T  5926882 tgcaaatatagaccatttgaattttcatccctgaagttactaatccgtccaatctgcctctgcaaatagtaatcatttgacttttggtcctaatta 5926787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 6056399 - 6056494
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | ||| || | ||| ||||| ||| | || |  |||||||||||||||||||| |||| ||||||||||    
T  6056399 tgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcatttgacttttggtcctaatta 6056494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 25415205 - 25415110
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||| ||||||||| ||||| |||||||| | ||||||||| ||| | ||    |||||||||||| ||||||| |||| ||||||||||    
T  25415205 tgcaaatataagtcatttgaattttcgttcctgaagttactaatccttccaatatgttcctgcaaatattaaccatttgacttttggtcctaatta 25415110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 33030696 - 33030601
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| ||||| |||||||| ||||| | | |||| | |||||||||  || | ||||| |||||||||||||||||||| |||| || |||||||    
T  33030696 tgcaaatatagatcatttgaattttcgtccatgaaattactaatcctttcaatctgccactgcaaatattaatcatttgacttttggttctaatta 33030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 37152899 - 37152804
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||  ||||||| ||||| |  ||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  37152899 tgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttagtcctaatta 37152804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 564 - 606
Target Start/End: Complemental strand, 35312299 - 35312257
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||||| |||||||| || |||||||||||||||||||||    
T  35312299 actaatccttccattttgtcattgcaaatattaatcatttgaa 35312257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 48380710 - 48380784
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||| |  ||||| | ||||||||| ||| | ||||| |||||| ||||||||||||||    
T  48380710 tataggtcatttgaattttcgtcgctgaagttactaatccttccaatctgccagtgcaaaaattaatcatttgaa 48380784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 621
Target Start/End: Original strand, 29980668 - 29980757
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||||||||| |||||   | |||| | ||||||| | ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  29980668 tataggtcatttgaattttcgcccatgaagttactaatctttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 29980757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 621
Target Start/End: Complemental strand, 52564990 - 52564933
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||| || ||||||||||| | ||||||||||||| |||| |||| ||||||||||    
T  52564990 actaattcttccattttgccactacaaatattaatcacttgagttttggtcctaatta 52564933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 4e-37; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 503 - 642
Target Start/End: Complemental strand, 53477180 - 53477041
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||  |||||||||||||||||    
T  53477180 ggcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 53477081  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggat 642  Q
    |||| |||  ||||||| | |  |||||| ||||||||||    
T  53477080 tgaaatttgttcctaatcacatttttttgatgaggtggat 53477041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 506 - 644
Target Start/End: Original strand, 54590146 - 54590284
Alignment:
Q  506 ttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttga 605  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||   |||||| |||||| || ||||||||||  | ||||||||||||||||||    
T  54590146 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcatttga 54590245  T
Q  606 attttcgtcctaattaaaaatttttgctgaggtggatgg 644  Q
    ||||||||||||||||||||  |||||| ||||||||||    
T  54590246 attttcgtcctaattaaaaaaatttgcttaggtggatgg 54590284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 503 - 731
Target Start/End: Complemental strand, 55013188 - 55012961
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||  ||| |||||||||  |||||||||||||| ||||| || ||||||||||||| ||||||  || || || ||||||||    
T  55013188 ggcttaaatatgcttttcatccatgtaattataggctatttgatttttcat-cctgagcttactaatcctcccagtttgcccctgtaattactaatcatt 55013090  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatggc 702  Q
    ||||  ||||||||||||| |||  ||||| |||||||| ||||||||| ||| |||||  |   || |||  |||||||| ||||||||||||||||||    
T  55013089 tgaaaattcgtcctaattacaaaaatttgccgaggtggagggtaattaggtacgtggcatttgatgaatggagttttgtcaagacacatcagcagatggc 55012990  T
Q  703 aattgcaatgacatttttgcccttaatga 731  Q
    ||  | ||||||||||||| |||||||||    
T  55012989 aagggaaatgacatttttgtccttaatga 55012961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 502 - 619
Target Start/End: Complemental strand, 54591679 - 54591560
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgc--aaatattaatc 599  Q
    |||||||||||||||||||||   ||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||  |||  |||||||||||    
T  54591679 tggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaaaaatattaatc 54591580  T
Q  600 atttgaattttcgtcctaat 619  Q
    ||||||||||||||||||||    
T  54591579 atttgaattttcgtcctaat 54591560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 23455789 - 23455677
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   || ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| || ||| ||||||||||    
T  23455789 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcatt 23455690  T
Q  603 tgaattttcgtcc 615  Q
    | || ||||||||    
T  23455689 tcaaatttcgtcc 23455677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 583
Target Start/End: Original strand, 23454954 - 23455034
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgcc 583  Q
    ||||||||||||||||||||   || ||||||||| ||||||||||||||| ||||| || ||||||| ||||||||||||    
T  23454954 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcc 23455034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 606
Target Start/End: Original strand, 32846385 - 32846465
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||| ||||||| ||||| |||||||| | | ||||||| ||||||||||| |||||||||||||||||||||    
T  32846385 tgcaaatataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatttgaa 32846465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 13336938 - 13336863
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccatt 578  Q
    ||||||||||||||||||||   ||||| ||||||||||||||  |||||| |||||||| |||||||||||||||    
T  13336938 ggcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccatt 13336863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 508 - 615
Target Start/End: Complemental strand, 38982691 - 38982584
Alignment:
Q  508 aaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaat 607  Q
    |||||||| ||||||   |||||||||||| | ||||||||||||| ||||| || ||||||||||||||||||||  || || || ||||||||||||     
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  608 tttcgtcc 615  Q
     |||||||    
T  38982591 gttcgtcc 38982584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 621
Target Start/End: Original strand, 20086466 - 20086555
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  20086466 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttagtcctaatta 20086555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 583
Target Start/End: Original strand, 38813553 - 38813634
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgcc 583  Q
    |||||||||||||| ||||||   || ||||||||| | ||||||||||||| |||||||| ||||||||| ||||||||||    
T  38813553 tggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcc 38813634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 651
Target Start/End: Complemental strand, 22882427 - 22882279
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||| ||||||||||||||  |||||| |||||||| | ||||||||||||| |  |  ||||| | ||||||| |    
T  22882427 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcact 22882328  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattag 651  Q
    | || ||| ||| |||| | |  |||||||||||||||| |||||||||    
T  22882327 tcaaatttggtcataatcacatttttttgctgaggtggagggtaattag 22882279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 651
Target Start/End: Complemental strand, 22934091 - 22933943
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    |||| |||||||||||||||   ||||| ||||||||||||||  |||||| |||||||| | ||||||||||||| |  |  ||||| | ||||||| |    
T  22934091 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcact 22933992  T
Q  603 tgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattag 651  Q
    | || ||| ||| |||| | |  |||||||||||||||| |||||||||    
T  22933991 tcaaatttggtcataatcacatttttttgctgaggtggagggtaattag 22933943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 35731022 - 35730942
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||||| || || |||||||||||||||||||||    
T  35731022 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattatgtcattgcaaatattaatcatttgaa 35730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 38814427 - 38814315
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || |||| |||| | ||||||||||||| |||||||| ||||||||| ||||||||||  || || || ||||||||    
T  38814427 ggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 38814328  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  38814327 tgaaagttcgtcc 38814315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 532 - 640
Target Start/End: Complemental strand, 47862507 - 47862399
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttg 631  Q
    |||||| ||||||| ||||| | | |||| | ||||||||| | | ||||||  |||||||||||||||||||| |||| |||||||||| |  ||||||    
T  47862507 tataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatcatttgacttttggtcctaattagatttttttg 47862408  T
Q  632 ctgaggtgg 640  Q
    |||||||||    
T  47862407 ctgaggtgg 47862399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 503 - 615
Target Start/End: Original strand, 56556582 - 56556694
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||| ||||||   || ||||||||| | ||||||||||||| | |||||| ||||||||| ||||||||||  || || || ||||||||    
T  56556582 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 56556681  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  56556682 tgaaagttcgtcc 56556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 19916679 - 19916774
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||| | |||||   |||||| | ||||||||| ||| | ||||| |||||||||||||||||||| |||| ||||||||||    
T  19916679 tgcaaatataggtcatttaaattttcgcccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcctaatta 19916774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 621
Target Start/End: Original strand, 50245886 - 50245975
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||||||||| ||||||| | |||| | ||||||| | ||| | ||||| |||||||||||||||||||| |||| ||| ||||||    
T  50245886 tataggtcatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttgacttttagtcttaatta 50245975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 615
Target Start/End: Complemental strand, 52816523 - 52816411
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||  ||||||   || ||||||||| | |||||||||||||  ||||||| ||||||||| ||||||||||  || || || ||||||||    
T  52816523 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatcatt 52816424  T
Q  603 tgaattttcgtcc 615  Q
    ||||  |||||||    
T  52816423 tgaaagttcgtcc 52816411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 619
Target Start/End: Original strand, 53475831 - 53475947
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||  |||||| | ||||| |||||  ||||||| ||||||| ||| || | |||||||||  ||  |||||  |||||||||||||||||    
T  53475831 ggcttaaatatgtctttcatctttgcaaatatagaccatttgagttttcatccctaaagttactaatcctttcaaattgcccttgcaaatattaatcatt 53475930  T
Q  603 tgaattttcgtcctaat 619  Q
    ||| |||| ||||||||    
T  53475931 tgagttttagtcctaat 53475947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 12691766 - 12691671
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||  | |||||| | ||||||||| ||| |  |||  |||||||||||||||||||| |||| ||||||||||    
T  12691766 tgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttgacttttggtcctaatta 12691671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 22250094 - 22249999
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | |||||| || ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  22250094 tgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttgacttttagtcctaatta 22249999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 53559748 - 53559653
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | ||||||| | ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  53559748 tgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 53559653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 504 - 615
Target Start/End: Complemental strand, 56557424 - 56557313
Alignment:
Q  504 gcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||| ||||||   |  ||||||||| | ||||||||||||| | |||||| ||||||||| ||||||||||  || || || |||||||||    
T  56557424 gcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcattt 56557325  T
Q  604 gaattttcgtcc 615  Q
    |||  |||||||    
T  56557324 gaaagttcgtcc 56557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 564 - 606
Target Start/End: Complemental strand, 489507 - 489465
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  489507 actaatccttccattttgccattgcaaatattaatcatttgaa 489465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 564 - 606
Target Start/End: Complemental strand, 515299 - 515257
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  515299 actaatccttccattttgccattgcaaatattaatcatttgaa 515257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 499 - 621
Target Start/End: Original strand, 12691402 - 12691524
Alignment:
Q  499 ttatggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaat 598  Q
    |||||||||||||| |  |||| |  |||||| |||||| ||||||| ||||| | |||||| | ||||||||| ||| | || |  | |||||||||||    
T  12691402 ttatggcttaaataggtctttcgtccatgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaatattaat 12691501  T
Q  599 catttgaattttcgtcctaatta 621  Q
    ||||||| |||| ||||||||||    
T  12691502 catttgacttttggtcctaatta 12691524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 640
Target Start/End: Original strand, 13872092 - 13872206
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| ||||||| |||||| ||||| | | |||| | | ||||||| ||| | ||||  |||||||| ||||||||||| |||| |||||||||| |      
T  13872092 tgcaaatataggttatttgaattttcgtccatgaagttattaatccttccaatatgcccttgcaaatactaatcatttgacttttggtcctaattagatt 13872191  T
Q  626 tttttgctgaggtgg 640  Q
    |||||||||||||||    
T  13872192 tttttgctgaggtgg 13872206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 640
Target Start/End: Complemental strand, 33294504 - 33294390
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaa 625  Q
    ||||| ||||||  |||||| ||||| | |||||| | ||||||||| ||  | ||||  |||||||||||||||||||| |||| |||||||||| |      
T  33294504 tgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatcatttgatttttggtcctaattagatt 33294405  T
Q  626 tttttgctgaggtgg 640  Q
    ||||| |||||||||    
T  33294404 tttttactgaggtgg 33294390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 564 - 641
Target Start/End: Complemental strand, 47981959 - 47981882
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgga 641  Q
    ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    ||||||||||||||||    
T  47981959 actaatccttccaatctgcccctgcaaatattaatcatttgatttttggtcctaattaggtttttttgctgaggtgga 47981882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 8286995 - 8287035
Alignment:
Q  566 taatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  8286995 taatccttccattttgccattgcaaatattaatcatttgaa 8287035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 621
Target Start/End: Complemental strand, 26601426 - 26601342
Alignment:
Q  537 gtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||||| ||||| | | |||| | ||||||| | ||| | |||| ||||||||||||||||||||| |||| ||||||||||    
T  26601426 gtcatttgaattttcgtccatgaagttactaatcattccaatatgcccatgcaaatattaatcatttgacttttggtcctaatta 26601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 606
Target Start/End: Complemental strand, 50246219 - 50246139
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||| |||||||||||||| ||||| | | |||| | ||||||||| ||| | || || |||||||||||||||||||||    
T  50246219 tgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgtcactgcaaatattaatcatttgaa 50246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 583
Target Start/End: Original strand, 52815663 - 52815743
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgcc 583  Q
    ||||||||||||| ||||||   || ||||||||| | |||||||||| || |||||||| |||||||||  |||||||||    
T  52815663 ggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcc 52815743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 54590284 - 54590328
Alignment:
Q  746 gcaaagactattttacccatatcttcttccctcactctccttctc 790  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||    
T  54590284 gcaaagaccattttacccatatcttcttccctcgttctccttctc 54590328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Complemental strand, 8287294 - 8287199
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||| ||||||| ||||| | |||||| | ||||||||| ||| | ||||| ||||||  |||||||||||| |||| ||||| ||||    
T  8287294 tgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttgacttttggtcctgatta 8287199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 22249756 - 22249851
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| ||||| |||||||| ||||| | | |||| | |||||||||  || | ||||  |||||||||||||||||||| |||| ||||||||||    
T  22249756 tgcaaatatagatcatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 22249851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 37677871 - 37677966
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |||||| | ||||||||| ||  | ||||| ||||||  |||||||||||| |||| ||| ||||||    
T  37677871 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccgatctgccactgcaaaatttaatcatttgacttttggtcataatta 37677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 621
Target Start/End: Original strand, 47862151 - 47862270
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    ||||||||||| |  ||||||   ||||| |||| ||||||||| ||||| |  ||||| | ||||||||| ||| | ||||  |||||||| |||||||    
T  47862151 tggcttaaataggtctttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcat 47862250  T
Q  602 ttgaattttcgtcctaatta 621  Q
    |||| |||| ||||||||||    
T  47862251 ttgactttttgtcctaatta 47862270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 564 - 606
Target Start/End: Original strand, 10128767 - 10128809
Alignment:
Q  564 actaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    ||||||||||||||||||||| | ||| |||||||||||||||    
T  10128767 actaatcctcccattttgccactacaattattaatcatttgaa 10128809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 501 - 731
Target Start/End: Original strand, 73107 - 73337
Alignment:
Q  501 atggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatca 600  Q
    ||||||||||||||| ||||||   || |||||| || ||||||| ||||||| ||||| || ||||||||||||||||||||  || || || ||||||    
T  73107 atggcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatca 73206  T
Q  601 tttgaattttcgtcctaattaaaaatttttgctgaggtggatggtaattagatacatggcaactagcgactggctttttgtcaggacacatcagcagatg 700  Q
    ||||||  || |||||||||| |||  |||||||||||||| ||||||||| ||| |||||  | | || |||  |||||||||||||||||||||||||    
T  73207 tttgaaaatttgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcacttggtgaatgggattttgtcaggacacatcagcagatg 73306  T
Q  701 gcaattgcaatgacatttttgcccttaatga 731  Q
    || |  | ||||||  |||||||||||||||    
T  73307 gcgagggaaatgaccattttgcccttaatga 73337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 75; Significance: 4e-34; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 503 - 621
Target Start/End: Original strand, 593 - 711
Alignment:
Q  503 ggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatt 602  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||  |||||||||||||||||    
T  593 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 692  T
Q  603 tgaattttcgtcctaatta 621  Q
    ||| |||| || |||||||    
T  693 tgacttttggttctaatta 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 621
Target Start/End: Complemental strand, 941 - 859
Alignment:
Q  539 catttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||||| ||||| | |||||| | ||||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||    
T  941 catttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 859  T

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Target: scaffold0347 (Bit Score: 51; Significance: 8e-20; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 14691 - 14593
Alignment:
Q  505 cttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcattt 603  Q
    |||||||||||||||||||  | |||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||  |  ||| |||||||||||    
T  14691 cttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattt 14593  T

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Target: scaffold0347; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 502 - 603
Target Start/End: Original strand, 13608 - 13709
Alignment:
Q  502 tggcttaaatatgcatttcatttatgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcat 601  Q
    |||||||||||||||||||||   |||||||||||| ||||||||||||||| ||||| || ||||||||| ||||||||||  |  ||| |||||||||    
T  13608 tggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcat 13707  T
Q  602 tt 603  Q
    ||    
T  13708 tt 13709  T

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Target: scaffold0279 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 10876 - 10971
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| |||||||||||||| ||||| | |  ||| | ||||||||| ||||||||||| |||||||||||||||||||| ||||  |||||||||    
T  10876 tgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttgacttttgatcctaatta 10971  T

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Target: scaffold0279; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 606
Target Start/End: Complemental strand, 11212 - 11138
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||| | | |||| | | |||| || ||||||||||| |||||||||||||||||||||    
T  11212 tataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaa 11138  T

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Target: scaffold0206 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 526 - 621
Target Start/End: Original strand, 10348 - 10443
Alignment:
Q  526 tgcaattataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    ||||| ||||| |||||||| ||||| | |||||| | ||||||||| ||| ||||||  |||||||||||||||||||| |||| ||||||||||    
T  10348 tgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 10443  T

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Target: scaffold0233 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 606
Target Start/End: Original strand, 8462 - 8536
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaa 606  Q
    |||||||||||||| ||||| | |||||| | ||||||||| ||| | ||||| |||||||||||||||||||||    
T  8462 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaa 8536  T

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Target: scaffold0233; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 532 - 620
Target Start/End: Complemental strand, 8787 - 8699
Alignment:
Q  532 tataggtcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatt 620  Q
    |||||||||||||| ||| ||| |  ||| | | ||||||| ||| |||| || |||||||||||||||||||| |||| |||||||||    
T  8787 tataggtcatttgaatttccatccgcgaagttattaatccttccaatttgtcactgcaaatattaatcatttgactttttgtcctaatt 8699  T

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Target: scaffold0201 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 621
Target Start/End: Complemental strand, 14242 - 14159
Alignment:
Q  538 tcatttgatttttcattcctgaactgactaatcctcccattttgccaatgcaaatattaatcatttgaattttcgtcctaatta 621  Q
    |||||||| |||||||  ||||| | ||||||||| ||| | ||||  | |||||||||||||||||| |||| ||||||||||    
T  14242 tcatttgaattttcatcactgaagttactaatccttccaatctgcccctacaaatattaatcatttgacttttggtcctaatta 14159  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 641
Target Start/End: Complemental strand, 10961 - 10908
Alignment:
Q  588 caaatattaatcatttgaattttcgtcctaattaaaaatttttgctgaggtgga 641  Q
    |||||||||||||||||| |||| ||||||||||    ||||||||||||||||    
T  10961 caaatattaatcatttgacttttggtcctaattaggtttttttgctgaggtgga 10908  T

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