View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0486_high_13 (Length: 426)

Name: NF0486_high_13
Description: NF0486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0486_high_13
NF0486_high_13
[»] chr1 (50 HSPs)
chr1 (45-223)||(13100189-13100368)
chr1 (46-223)||(9954987-9955165)
chr1 (51-223)||(13276218-13276391)
chr1 (51-223)||(12513285-12513458)
chr1 (51-219)||(23528660-23528829)
chr1 (51-223)||(42180017-42180190)
chr1 (45-223)||(9352015-9352194)
chr1 (51-223)||(19009898-19010071)
chr1 (46-223)||(9327165-9327345)
chr1 (46-223)||(16125407-16125588)
chr1 (46-219)||(18304767-18304941)
chr1 (46-219)||(25146725-25146898)
chr1 (62-223)||(9128792-9128953)
chr1 (291-397)||(47786104-47786209)
chr1 (292-400)||(12513518-12513626)
chr1 (46-184)||(41032661-41032800)
chr1 (46-223)||(21846226-21846398)
chr1 (135-223)||(32881416-32881504)
chr1 (53-179)||(17055995-17056122)
chr1 (82-223)||(17869702-17869843)
chr1 (291-400)||(30619188-30619295)
chr1 (291-400)||(41032547-41032656)
chr1 (123-223)||(18228278-18228377)
chr1 (145-223)||(47785958-47786036)
chr1 (291-397)||(32881566-32881672)
chr1 (73-150)||(18337547-18337624)
chr1 (64-127)||(12800629-12800692)
chr1 (305-400)||(13100450-13100545)
chr1 (305-400)||(25146542-25146637)
chr1 (51-121)||(30619079-30619150)
chr1 (51-131)||(14074414-14074495)
chr1 (291-400)||(16434755-16434864)
chr1 (43-119)||(24117003-24117080)
chr1 (144-184)||(13100391-13100431)
chr1 (291-399)||(14074258-14074366)
chr1 (305-384)||(19009738-19009817)
chr1 (310-400)||(9351837-9351927)
chr1 (291-400)||(17055694-17055802)
chr1 (286-397)||(17197306-17197417)
chr1 (305-400)||(17869524-17869619)
chr1 (291-398)||(21846050-21846157)
chr1 (347-405)||(9954765-9954823)
chr1 (309-379)||(9954828-9954898)
chr1 (308-382)||(22789446-22789520)
chr1 (51-131)||(27917496-27917577)
chr1 (305-379)||(16125250-16125324)
chr1 (294-368)||(39845061-39845135)
chr1 (148-184)||(16125343-16125379)
chr1 (144-172)||(18304711-18304739)
chr1 (144-172)||(23528857-23528885)
[»] chr2 (44 HSPs)
chr2 (46-223)||(31237929-31238107)
chr2 (46-220)||(30432418-30432593)
chr2 (46-223)||(1404782-1404960)
chr2 (46-223)||(36429847-36430025)
chr2 (51-223)||(31578009-31578181)
chr2 (82-223)||(35565906-35566047)
chr2 (46-172)||(23863324-23863451)
chr2 (46-221)||(20063713-20063889)
chr2 (94-216)||(15588809-15588931)
chr2 (74-172)||(19491885-19491982)
chr2 (135-223)||(1690680-1690768)
chr2 (305-397)||(15588632-15588724)
chr2 (61-179)||(25539222-25539340)
chr2 (284-399)||(8428461-8428576)
chr2 (44-152)||(1690785-1690894)
chr2 (291-400)||(19245835-19245944)
chr2 (291-399)||(1405029-1405137)
chr2 (78-148)||(31023255-31023325)
chr2 (291-400)||(20063969-20064078)
chr2 (291-371)||(35565757-35565840)
chr2 (311-403)||(23863261-23863352)
chr2 (74-149)||(34841584-34841659)
chr2 (63-145)||(16766727-16766809)
chr2 (291-400)||(13502448-13502556)
chr2 (144-184)||(13502561-13502601)
chr2 (291-399)||(25538920-25539028)
chr2 (291-399)||(16767031-16767140)
chr2 (291-404)||(19262086-19262199)
chr2 (291-392)||(20034004-20034105)
chr2 (144-184)||(15588742-15588782)
chr2 (291-379)||(27523891-27523979)
chr2 (144-184)||(35565845-35565885)
chr2 (74-149)||(5395674-5395749)
chr2 (145-184)||(27406993-27407032)
chr2 (291-400)||(974584-974694)
chr2 (309-395)||(19492132-19492218)
chr2 (296-369)||(27407042-27407116)
chr2 (340-400)||(1690509-1690570)
chr2 (56-89)||(29660903-29660936)
chr2 (191-223)||(5395475-5395507)
chr2 (60-148)||(17995069-17995157)
chr2 (46-125)||(19245152-19245232)
chr2 (295-395)||(31062311-31062411)
chr2 (146-178)||(34841784-34841816)
[»] chr8 (52 HSPs)
chr8 (46-223)||(31424162-31424340)
chr8 (61-223)||(22910154-22910316)
chr8 (46-223)||(11879599-11879777)
chr8 (46-223)||(11897015-11897193)
chr8 (61-223)||(15294685-15294847)
chr8 (61-223)||(15475054-15475216)
chr8 (66-223)||(29384269-29384425)
chr8 (45-223)||(5922047-5922226)
chr8 (93-223)||(19704407-19704537)
chr8 (51-223)||(45403033-45403206)
chr8 (95-223)||(23142224-23142352)
chr8 (50-223)||(3094195-3094379)
chr8 (93-223)||(6810869-6810998)
chr8 (65-223)||(32424354-32424509)
chr8 (51-197)||(17646997-17647144)
chr8 (99-221)||(27836418-27836540)
chr8 (291-400)||(29384086-29384195)
chr8 (94-223)||(7489235-7489368)
chr8 (135-219)||(9212211-9212295)
chr8 (291-399)||(17647243-17647351)
chr8 (291-400)||(15231867-15231976)
chr8 (302-399)||(31424424-31424518)
chr8 (293-398)||(3094020-3094125)
chr8 (291-368)||(6811065-6811142)
chr8 (291-400)||(22909978-22910086)
chr8 (61-223)||(6292294-6292456)
chr8 (284-396)||(24056348-24056460)
chr8 (334-399)||(9212141-9212206)
chr8 (290-382)||(17566343-17566435)
chr8 (291-399)||(24414062-24414170)
chr8 (309-400)||(11879864-11879955)
chr8 (309-400)||(11897280-11897371)
chr8 (333-390)||(6292193-6292250)
chr8 (46-121)||(477101-477177)
chr8 (45-148)||(15761466-15761570)
chr8 (144-184)||(29384200-29384240)
chr8 (291-395)||(45403275-45403379)
chr8 (305-388)||(19704243-19704326)
chr8 (63-125)||(24056618-24056680)
chr8 (306-379)||(2040380-2040453)
chr8 (139-184)||(15294865-15294910)
chr8 (139-184)||(15475234-15475279)
chr8 (291-400)||(15761132-15761241)
chr8 (291-392)||(16752269-16752370)
chr8 (96-172)||(15231774-15231850)
chr8 (144-184)||(17647198-17647238)
chr8 (139-179)||(19704350-19704390)
chr8 (291-356)||(7262008-7262073)
chr8 (144-184)||(6811021-6811060)
chr8 (144-172)||(15761258-15761286)
chr8 (148-184)||(23142379-23142415)
chr8 (291-395)||(26574896-26575000)
[»] chr3 (71 HSPs)
chr3 (44-212)||(29067281-29067450)
chr3 (51-223)||(39427906-39428079)
chr3 (44-223)||(8156082-8156263)
chr3 (46-223)||(28745769-28745953)
chr3 (46-223)||(24620152-24620333)
chr3 (291-400)||(25870096-25870205)
chr3 (51-199)||(20756043-20756192)
chr3 (45-208)||(17064319-17064483)
chr3 (119-223)||(42696920-42697024)
chr3 (61-208)||(21963444-21963590)
chr3 (61-208)||(21985880-21986026)
chr3 (291-400)||(3449084-3449193)
chr3 (63-219)||(22137295-22137450)
chr3 (284-399)||(17064546-17064661)
chr3 (51-202)||(3449265-3449416)
chr3 (292-400)||(41671426-41671534)
chr3 (291-396)||(22137523-22137628)
chr3 (64-223)||(22494740-22494892)
chr3 (54-172)||(30727694-30727813)
chr3 (291-392)||(21963677-21963778)
chr3 (291-392)||(21986113-21986214)
chr3 (51-179)||(24649684-24649814)
chr3 (291-400)||(9152760-9152868)
chr3 (135-223)||(15515208-15515296)
chr3 (46-150)||(15806531-15806635)
chr3 (44-198)||(22356029-22356185)
chr3 (291-402)||(42697094-42697204)
chr3 (293-399)||(8155904-8156010)
chr3 (294-404)||(27090691-27090801)
chr3 (291-400)||(28746022-28746131)
chr3 (291-400)||(13286190-13286299)
chr3 (291-400)||(15515032-15515141)
chr3 (46-146)||(17796376-17796477)
chr3 (46-146)||(19104816-19104917)
chr3 (46-186)||(25870356-25870506)
chr3 (294-382)||(27676685-27676773)
chr3 (294-400)||(28136011-28136117)
chr3 (291-400)||(8592173-8592282)
chr3 (46-150)||(27676355-27676460)
chr3 (291-399)||(10872490-10872598)
chr3 (291-398)||(17796811-17796918)
chr3 (291-398)||(19105251-19105358)
chr3 (291-356)||(6136387-6136452)
chr3 (46-146)||(17796267-17796368)
chr3 (46-146)||(19104707-19104808)
chr3 (99-150)||(10872971-10873022)
chr3 (305-400)||(20766675-20766770)
chr3 (291-392)||(3041469-3041570)
chr3 (46-146)||(17796485-17796586)
chr3 (46-146)||(19104925-19105026)
chr3 (144-184)||(6136457-6136497)
chr3 (284-400)||(8560231-8560347)
chr3 (310-398)||(19348818-19348906)
chr3 (291-403)||(22971055-22971166)
chr3 (144-184)||(25870210-25870250)
chr3 (144-184)||(42697049-42697089)
chr3 (341-400)||(15806222-15806281)
chr3 (349-400)||(24649523-24649574)
chr3 (173-223)||(9152935-9152985)
chr3 (309-375)||(13006089-13006155)
chr3 (291-400)||(29067523-29067631)
chr3 (146-178)||(6861033-6861065)
chr3 (144-184)||(13286145-13286185)
chr3 (144-184)||(17064508-17064548)
chr3 (144-172)||(20756223-20756251)
chr3 (291-399)||(24619972-24620080)
chr3 (183-223)||(27676572-27676612)
chr3 (144-184)||(27676637-27676677)
chr3 (144-172)||(28745977-28746005)
chr3 (144-172)||(29067478-29067506)
chr3 (144-172)||(39428104-39428132)
[»] chr7 (67 HSPs)
chr7 (46-223)||(24725429-24725607)
chr7 (64-223)||(27221436-27221595)
chr7 (64-223)||(14055269-14055428)
chr7 (64-223)||(14365297-14365456)
chr7 (51-223)||(24990023-24990196)
chr7 (45-219)||(26281266-26281440)
chr7 (51-223)||(5058533-5058706)
chr7 (51-223)||(44944797-44944974)
chr7 (51-223)||(8346484-8346658)
chr7 (66-223)||(4247376-4247533)
chr7 (36-223)||(8329996-8330185)
chr7 (36-214)||(8343761-8343940)
chr7 (51-223)||(5715294-5715466)
chr7 (46-199)||(9685220-9685374)
chr7 (93-223)||(17811394-17811524)
chr7 (61-216)||(11324994-11325148)
chr7 (46-184)||(39182259-39182397)
chr7 (46-199)||(7730319-7730472)
chr7 (66-204)||(27509914-27510052)
chr7 (116-223)||(20570837-20570944)
chr7 (51-208)||(22687631-22687789)
chr7 (51-172)||(11326390-11326512)
chr7 (291-400)||(39182402-39182511)
chr7 (291-399)||(14055503-14055610)
chr7 (291-399)||(14365531-14365638)
chr7 (61-170)||(8571258-8571367)
chr7 (291-399)||(22687042-22687150)
chr7 (101-184)||(1977707-1977790)
chr7 (51-168)||(21846433-21846550)
chr7 (291-398)||(4574976-4575083)
chr7 (305-383)||(1977808-1977886)
chr7 (302-400)||(11325235-11325333)
chr7 (321-401)||(10285676-10285756)
chr7 (284-399)||(26565323-26565438)
chr7 (291-397)||(8304332-8304438)
chr7 (111-223)||(6916847-6916956)
chr7 (63-223)||(26617428-26617588)
chr7 (291-390)||(8329763-8329862)
chr7 (291-381)||(8343595-8343685)
chr7 (294-371)||(7730162-7730239)
chr7 (291-404)||(8346236-8346349)
chr7 (291-371)||(21846250-21846330)
chr7 (46-131)||(8630002-8630088)
chr7 (291-344)||(8329874-8329927)
chr7 (291-396)||(17741890-17741997)
chr7 (291-399)||(17811594-17811702)
chr7 (308-399)||(24989549-24989640)
chr7 (139-184)||(4247552-4247597)
chr7 (291-344)||(8346361-8346414)
chr7 (291-400)||(26617251-26617360)
chr7 (291-371)||(30294492-30294571)
chr7 (307-374)||(27221676-27221743)
chr7 (291-400)||(4247602-4247711)
chr7 (295-399)||(5058778-5058882)
chr7 (321-400)||(8253958-8254037)
chr7 (291-373)||(3696684-3696766)
chr7 (189-223)||(21846398-21846432)
chr7 (306-400)||(25842505-25842599)
chr7 (291-344)||(21157523-21157576)
chr7 (144-184)||(7730247-7730287)
chr7 (144-184)||(8329867-8329907)
chr7 (144-184)||(8329932-8329972)
chr7 (144-172)||(17811549-17811577)
chr7 (144-184)||(21846335-21846375)
chr7 (291-339)||(24725307-24725355)
chr7 (144-172)||(24725372-24725400)
chr7 (144-172)||(24989673-24989701)
[»] chr6 (61 HSPs)
chr6 (61-223)||(23897826-23897988)
chr6 (46-223)||(30912364-30912542)
chr6 (61-208)||(17250072-17250219)
chr6 (51-223)||(15528062-15528235)
chr6 (51-223)||(26053248-26053421)
chr6 (51-223)||(26073301-26073474)
chr6 (46-223)||(7223518-7223689)
chr6 (46-223)||(17543692-17543870)
chr6 (93-223)||(21354787-21354917)
chr6 (51-218)||(7918338-7918506)
chr6 (61-189)||(27233263-27233391)
chr6 (93-217)||(22498843-22498967)
chr6 (45-223)||(19748331-19748510)
chr6 (51-205)||(2912218-2912372)
chr6 (105-223)||(17103254-17103372)
chr6 (46-221)||(11327525-11327701)
chr6 (46-171)||(6943464-6943590)
chr6 (45-210)||(10508989-10509154)
chr6 (302-400)||(23898067-23898165)
chr6 (295-396)||(23506092-23506193)
chr6 (294-399)||(30912181-30912286)
chr6 (291-389)||(2912046-2912144)
chr6 (291-400)||(7223761-7223870)
chr6 (52-131)||(18491081-18491161)
chr6 (60-123)||(3573984-3574047)
chr6 (305-396)||(27614434-27614525)
chr6 (291-344)||(4841659-4841712)
chr6 (45-125)||(5422798-5422879)
chr6 (291-400)||(11327336-11327445)
chr6 (291-400)||(19748579-19748688)
chr6 (291-400)||(22498214-22498323)
chr6 (297-375)||(31407561-31407639)
chr6 (291-400)||(17543504-17543613)
chr6 (324-376)||(10508829-10508881)
chr6 (72-131)||(18491005-18491064)
chr6 (308-379)||(31108418-31108489)
chr6 (168-223)||(27614594-27614651)
chr6 (291-399)||(3573674-3573783)
chr6 (83-148)||(4841946-4842011)
chr6 (291-356)||(20432411-20432476)
chr6 (284-400)||(7918124-7918240)
chr6 (291-379)||(15527905-15527993)
chr6 (144-183)||(4841718-4841757)
chr6 (180-222)||(7918301-7918343)
chr6 (298-400)||(21354928-21355030)
chr6 (144-185)||(2912148-2912189)
chr6 (139-172)||(17103391-17103424)
chr6 (291-400)||(17103441-17103550)
chr6 (72-125)||(18490935-18490988)
chr6 (291-396)||(26053074-26053179)
chr6 (291-396)||(26073127-26073232)
chr6 (144-172)||(7918250-7918278)
chr6 (144-184)||(10508905-10508945)
chr6 (144-172)||(17543630-17543658)
chr6 (144-172)||(19748534-19748562)
chr6 (144-172)||(22498340-22498368)
chr6 (144-184)||(23898012-23898052)
chr6 (144-172)||(26053196-26053224)
chr6 (144-172)||(26073249-26073277)
chr6 (144-184)||(30912294-30912334)
chr6 (146-178)||(33593057-33593089)
[»] chr5 (41 HSPs)
chr5 (45-223)||(21059108-21059286)
chr5 (46-223)||(18051485-18051660)
chr5 (46-223)||(19578941-19579119)
chr5 (51-223)||(43234872-43235045)
chr5 (60-223)||(18843729-18843892)
chr5 (51-223)||(23172380-23172557)
chr5 (95-223)||(19979648-19979776)
chr5 (64-223)||(41688617-41688775)
chr5 (51-208)||(38158221-38158379)
chr5 (45-212)||(22645681-22645850)
chr5 (61-223)||(27340142-27340300)
chr5 (51-171)||(20923722-20923843)
chr5 (95-223)||(20320992-20321119)
chr5 (284-402)||(24648248-24648368)
chr5 (291-399)||(41688441-41688549)
chr5 (291-379)||(19377849-19377937)
chr5 (335-399)||(19979858-19979922)
chr5 (51-120)||(19042444-19042514)
chr5 (307-401)||(41427681-41427775)
chr5 (306-399)||(27339962-27340055)
chr5 (291-399)||(43005634-43005742)
chr5 (291-398)||(18843961-18844068)
chr5 (310-400)||(18051307-18051397)
chr5 (145-187)||(19042406-19042448)
chr5 (291-352)||(21058978-21059040)
chr5 (291-337)||(38158101-38158147)
chr5 (295-344)||(17624851-17624900)
chr5 (47-119)||(24106641-24106714)
chr5 (291-400)||(43235114-43235223)
chr5 (291-399)||(15051872-15051980)
chr5 (144-184)||(21059045-21059085)
chr5 (144-184)||(27340075-27340115)
chr5 (333-396)||(30804216-30804279)
chr5 (51-112)||(20320928-20320990)
chr5 (294-339)||(15904976-15905021)
chr5 (190-223)||(26021464-26021497)
chr5 (144-172)||(18843916-18843944)
chr5 (144-172)||(19579144-19579172)
chr5 (144-172)||(20321144-20321172)
chr5 (291-399)||(20321189-20321297)
chr5 (332-396)||(29270310-29270374)
[»] chr4 (52 HSPs)
chr4 (46-223)||(5361915-5362093)
chr4 (62-223)||(9770128-9770289)
chr4 (52-223)||(8889233-8889405)
chr4 (84-223)||(9911363-9911502)
chr4 (46-223)||(13023566-13023747)
chr4 (46-223)||(36120823-36121001)
chr4 (61-223)||(10142914-10143076)
chr4 (51-223)||(17466083-17466256)
chr4 (51-223)||(5375668-5375841)
chr4 (46-199)||(13551598-13551752)
chr4 (61-223)||(23064913-23065077)
chr4 (88-223)||(37240300-37240434)
chr4 (291-400)||(6346729-6346838)
chr4 (51-171)||(8011220-8011341)
chr4 (291-401)||(18459404-18459514)
chr4 (291-400)||(8889463-8889571)
chr4 (291-399)||(37240485-37240593)
chr4 (291-384)||(5361755-5361848)
chr4 (51-150)||(7044731-7044831)
chr4 (303-402)||(7045202-7045301)
chr4 (291-389)||(5943044-5943142)
chr4 (284-400)||(7452745-7452860)
chr4 (305-400)||(9770372-9770467)
chr4 (46-125)||(6347114-6347194)
chr4 (61-150)||(7452435-7452523)
chr4 (291-400)||(10394856-10394965)
chr4 (51-149)||(4156767-4156866)
chr4 (291-392)||(4157273-4157377)
chr4 (291-392)||(4157560-4157664)
chr4 (291-397)||(10143146-10143250)
chr4 (46-131)||(24719516-24719602)
chr4 (61-150)||(18459733-18459822)
chr4 (295-399)||(17466329-17466433)
chr4 (346-400)||(24719869-24719923)
chr4 (305-400)||(5375925-5376020)
chr4 (291-394)||(9149502-9149605)
chr4 (49-150)||(7815559-7815661)
chr4 (144-181)||(4157053-4157090)
chr4 (291-356)||(8010954-8011019)
chr4 (291-339)||(11320974-11321022)
chr4 (294-390)||(13023807-13023903)
chr4 (320-396)||(46664152-46664228)
chr4 (145-184)||(6346843-6346882)
chr4 (291-398)||(23064737-23064844)
chr4 (150-184)||(24719782-24719816)
chr4 (284-325)||(5884129-5884170)
chr4 (291-400)||(55476234-55476343)
chr4 (144-184)||(7044964-7045004)
chr4 (144-184)||(8011024-8011064)
chr4 (148-184)||(9911299-9911335)
chr4 (144-184)||(17466280-17466320)
chr4 (144-172)||(36121024-36121052)
[»] scaffold0186 (3 HSPs)
scaffold0186 (46-223)||(8442-8620)
scaffold0186 (291-400)||(8687-8796)
scaffold0186 (144-172)||(8642-8670)
[»] scaffold0417 (1 HSPs)
scaffold0417 (61-223)||(7407-7569)
[»] scaffold0042 (3 HSPs)
scaffold0042 (46-223)||(93657-93834)
scaffold0042 (291-395)||(93483-93588)
scaffold0042 (144-184)||(93593-93633)
[»] scaffold0510 (2 HSPs)
scaffold0510 (61-184)||(91-215)
scaffold0510 (302-371)||(7-76)
[»] scaffold0028 (1 HSPs)
scaffold0028 (291-399)||(145834-145942)
[»] scaffold0016 (3 HSPs)
scaffold0016 (291-403)||(56196-56308)
scaffold0016 (167-221)||(58736-58790)
scaffold0016 (144-172)||(56325-56353)
[»] scaffold0048 (3 HSPs)
scaffold0048 (60-124)||(48839-48903)
scaffold0048 (291-399)||(61089-61197)
scaffold0048 (291-339)||(48497-48545)
[»] scaffold0603 (3 HSPs)
scaffold0603 (291-392)||(8741-8842)
scaffold0603 (46-146)||(9049-9150)
scaffold0603 (144-172)||(8859-8887)
[»] scaffold0534 (1 HSPs)
scaffold0534 (290-382)||(915-1007)
[»] scaffold0036 (1 HSPs)
scaffold0036 (46-150)||(37191-37296)
[»] scaffold0115 (1 HSPs)
scaffold0115 (51-132)||(35102-35184)
[»] scaffold0150 (1 HSPs)
scaffold0150 (291-399)||(33184-33299)


Alignment Details
Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 13100189 - 13100368
Alignment:
Q  45 ccattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||||||    
T  13100189 ccattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggc 13100288  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13100289 aaaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatataccatttgtaacatat 13100368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 9955165 - 9954987
Alignment:
Q  46 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| | ||||||| ||||||| ||||||||| | |||||||||||||||||||||| |||||||  ||||||| | |||||| |||    
T  9955165 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagca 9955066  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  9955065 aaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatataccatttataacatat 9954987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 13276391 - 13276218
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| || |||||| ||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||||| | |||||||||||||||    
T  13276391 ttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaaaatc 13276292  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
     |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  13276291 aatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatcatttataacatat 13276218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 12513285 - 12513458
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| ||| ||||||||||||| | |||||||||| |||||||||||||||||||||||| |||   ||||||  |||||||    
T  12513285 ttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaatc 12513384  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  12513385 catcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatataccatatataacatat 12513458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 51 - 219
Target Start/End: Original strand, 23528660 - 23528829
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| | |||||||  ||||||  |||||||| | |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  23528660 ttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 23528759  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 219  Q
     ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  23528760 tatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatataccatttataac 23528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 42180190 - 42180017
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| | |||||||||||||||  |||||||| | ||||||||| |||||||||| ||||||||||||||||||   ||||||||||||||     
T  42180190 ttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaaata 42180091  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42180090 catcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatataccatttataacatat 42180017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 9352194 - 9352015
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    ||||| |||||||||||| ||||||||| |||||||| ||| |||| | ||||||||||||||||| |||||||||| |||| ||| | | ||||||| |    
T  9352194 ccattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagac 9352095  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9352094 aaaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatataccatttataacatat 9352015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 19010071 - 19009898
Alignment:
Q  51 ttgtcaaaatccg-acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    ||||||||||||| |||||||| |||||||  |||||||| | ||||| ||||||||||| |||| |||||||||||| ||| | |||||| ||||||||    
T  19010071 ttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaatc 19009972  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  19009971 catcgattttgattgcgattttacgatttcttataaattaagtcatttataactatataccatttataacatat 19009898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 9327345 - 9327165
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||| ||||||| ||||||||| ||||||| |||| |||| | ||||||| |||||||||||||||||||| |||||| ||| | ||||||| ||    
T  9327345 cattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagaca 9327246  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtca--tttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||  ||| |||||||||||||||||||| ||||    
T  9327245 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatataccatttataatatat 9327165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 16125588 - 16125407
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttctt---caccttcaacgactcaaatccatagtagaatacaaaaatag 141  Q
    ||||||| ||||||||| ||||||||| |||||||  |||||||| | ||||||||   |||||||||||||  |||||||||||| |||   |||||||    
T  16125588 cattattttcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaatag 16125489  T
Q  142 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  16125488 gcaaaatccattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatataccatttataacatat 16125407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 18304941 - 18304767
Alignment:
Q  46 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaa-cgactcaaatccatagtagaatacaaaaataggc 143  Q
    |||| |||||||||||| | ||||||| |||||||| || ||||| | ||||||||||||||||| |||||||||| |||||||||||   ||||||| |    
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 219  Q
    |||||||||| ||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||| |||||    
T  18304841 aaaatccatcaattttgattgcga-tttacgatttcttataagctaagtcatttatgactatataccattcataac 18304767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 25146898 - 25146725
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| |||||||  || ||||| | ||||||||||||||||||||||||||| ||||||||||| | ||||||| ||    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 219  Q
    || | |||| ||||| ||||||| |||| |||||||||||||| |||| |||||||||||||||| |||||||||    
T  25146798 aagtacatcaattttaattgcga-tttacgatttcttataaactaagttatttatgactatatacaatttataac 25146725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 9128953 - 9128792
Alignment:
Q  62 cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttga 161  Q
    |||||||||| ||||||  |||||| || | ||||||||||| || ||||||||||||  ||||||||||   ||||||| |||||| ||||||||||||    
T  9128953 cgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaaaattcatcgattttga 9128854  T
Q  162 ttgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| | |||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  9128853 ttgcgatttgacgatttcttataaactaagttatttttgactatataccatttataacatat 9128792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 291 - 397
Target Start/End: Original strand, 47786104 - 47786209
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||    
T  47786104 ttctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacgattgtcgattttgctcttctctttcaacctaaag-aaaatcccgatttt 47786202  T
Q  391 gacaacc 397  Q
    |||||||    
T  47786203 gacaacc 47786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 292 - 400
Target Start/End: Original strand, 12513518 - 12513626
Alignment:
Q  292 tctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttg 391  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||| ||||||||    
T  12513518 tctacagaagtagttgagtaaaatcctttgattttggttgcgattttacaattgtcgattttgctcttctcttttgacctgaagcaaaatcccaattttg 12513617  T
Q  392 acaaccttg 400  Q
    |||||||||    
T  12513618 acaaccttg 12513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 41032800 - 41032661
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||||||||||| ||||||||||  || |||  |||||||| | | ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  41032800 cattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggca 41032701  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||| ||||||||||||  ||||||||||    
T  41032700 aaatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 21846398 - 21846226
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| || |||||| |||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||   |||||||  |    
T  21846398 cattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaa 21846299  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||||||   |||| | ||||||   ||||||||| ||||||||  |||||||||||||    
T  21846298 aaatccatcgattttgattgcgatttt---atttttcataaac---gtcatttataactatatataatttataacatat 21846226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 32881416 - 32881504
Alignment:
Q  135 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatataccatttataacatat 32881504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 17056122 - 17055995
Alignment:
Q  53 gtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcca 151  Q
    |||||||||| || |||||| |||||||| |||||||| ||| ||||| |||||||||||||||| ||||||||||||||   |||||| | ||||||||    
T  17056122 gtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagtaaaatcca 17056023  T
Q  152 tcgattttgattgcgattttaagatttc 179  Q
    ||||||||||||||||||||| ||||||    
T  17056022 tcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 17869843 - 17869702
Alignment:
Q  82 aggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttctt 181  Q
    |||||||| | ||||||||||||||| |||||  ||||||| |||||||| | |||||||||||||| | |||||||||||||| |||||| ||||||||    
T  17869843 aggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaaattcttcgattttgattgcaattttacgatttctt 17869744  T
Q  182 ataaaccaagtcatttatgactatataccatttataacatat 223  Q
     ||||| ||||| ||||| || |||||| ||||| |||||||    
T  17869743 ttaaactaagtcttttataaccatatactatttacaacatat 17869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 30619188 - 30619295
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||| | |||||    
T  30619188 ttctacaaaagtagttgagtaaaatccttcgatttttgttgcgattt-acgattgtcgattttgctcttctctttcgacctgaag-aaaatcccgatttt 30619285  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  30619286 gacaaccttg 30619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 41032656 - 41032547
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||| ||| |||||| |||| |||||||||||| || |||||||||||||||||| |||| |||||||||| | |||||    
T  41032656 ttctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgattatcaattttgctcttctctttcaacctgaagtaaaatccctatttt 41032557  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  41032556 gacaaccttg 41032547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 18228278 - 18228377
Alignment:
Q  123 tagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacata 222  Q
    ||||||||| | ||||||||||||||||||| |||||||||| ||||||| |||||||||||||  |||| |||||||||||||||||||||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaattaagttatttatgactatataccatttataacata 18228376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 47785958 - 47786036
Alignment:
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 47786036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 397
Target Start/End: Original strand, 32881566 - 32881672
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||  |||||||||||||||||| |||||  |||| |||||||||||||||||||||||| ||||||||| | || ||| |||||| | |||||    
T  32881566 ttctacaaacgtagttgagtaaaatccttcgatttcagttgcgattttacgattgtcgattttgcttttctctttcaatctgaagcaaaatcccgatttt 32881665  T
Q  391 gacaacc 397  Q
    || ||||    
T  32881666 gaaaacc 32881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 18337624 - 18337547
Alignment:
Q  73 ctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 150  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||  | ||||||||||||||||    
T  18337624 ctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggcaaaatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 12800692 - 12800629
Alignment:
Q  64 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagta 127  Q
    |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  12800692 acttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagta 12800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 13100450 - 13100545
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||||||||||||||| ||| |||||||||| |  |||||||||  ||| |||||||| | ||||||| || | |||||||||||||||    
T  13100450 ttgagtaaaatcctttgattttgattgcgattttacgagttccgattttgccattccctttcgacttgaagtaaagtcccgattttgacaaccttg 13100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 400
Target Start/End: Complemental strand, 25146637 - 25146542
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||||||| ||||||| ||| ||||||||||||  |||||||||| ||| ||||| |||| ||||||| ||   |||||||||||||||    
T  25146637 ttgagtaaaatccttcgattttgattgcgattttacgatttccgattttgctattccctttcaacctgaagtaaagtcctgattttgacaaccttg 25146542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 30619079 - 30619150
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatcc 121  Q
    |||||||||||| ||||||||| |||||||| |||||||| | | |||||||||||||||||||||||||||    
T  30619079 ttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 14074495 - 14074414
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 131  Q
    |||||||||||| | ||||||| ||||||| ||||||||| | ||||||||||  |||||||||||||||||| ||||||||    
T  14074495 ttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaat 14074414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 16434755 - 16434864
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| | || ||||||||||||| ||||||| |||  ||||||||||| ||||||||||| ||| |||| |||||| || ||||||   |||||    
T  16434755 ttctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacgattttcgattttgctattcccttttgacctagagaaaaatcctgatttt 16434854  T
Q  391 gacaaccttg 400  Q
    ||||| ||||    
T  16434855 gacaatcttg 16434864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 24117003 - 24117080
Alignment:
Q  43 atccattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaat 119  Q
    ||||||| |||||||||| || | |||||||||||||| || |||||||||||||| |||||||||||||| ||||||    
T  24117003 atccattgttgtcaaaattccaatttaaattctaaaatttaagattttacaactttattcaccttcaacgattcaaat 24117080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 13100391 - 13100431
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13100391 aaaatccatcgattttgattgcgattttaagatttcttata 13100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 14074366 - 14074258
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||||||||||| || |  | |||||||| ||| |||||||||| ||||||| ||   |||||    
T  14074366 ttctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctattccctttcgacctgaagtaaagtcctgatttt 14074267  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  14074266 gacaacctt 14074258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 19009817 - 19009738
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctc 384  Q
    ||||||||||||||||||||||| ||| |||||||||| |  |||||||||| ||| ||||||| || ||||||| ||||    
T  19009817 ttgagtaaaatcctttgattttgattgcgattttacgagtcccgattttgctattccctttcgatctgaagtaaagtctc 19009738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 400
Target Start/End: Complemental strand, 9351927 - 9351837
Alignment:
Q  310 taaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    |||||||||  ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||| ||||||| |||  |||||||||||||||    
T  9351927 taaaatcctacgattttgattgcgattttacgagtcccgattttgctattcgctttcgacctgaagtaaagtcttgattttgacaaccttg 9351837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 17055802 - 17055694
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||||||||| |  ||||||| |  | | |||||||||| |||||||  | | |||||    
T  17055802 ttctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttacaatcccctttcgacct-aagtaaagacccgatttt 17055704  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  17055703 gacaaccttg 17055694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 397
Target Start/End: Complemental strand, 17197417 - 17197306
Alignment:
Q  286 attggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctca 385  Q
    |||| |||||||||| |  ||||||||||||||| |||||| |||| |||||||||| |  ||||||||||  || |||||||| | ||||||| || |     
T  17197417 attgattctacaaaagtccttgagtaaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcgacttgaagtaaagtcccg 17197318  T
Q  386 attttgacaacc 397  Q
    ||||||| ||||    
T  17197317 attttgataacc 17197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 400
Target Start/End: Complemental strand, 17869619 - 17869524
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||||||||||||||| ||| |||||||||  |  |||||||||||||| |||| ||||| || || | || | |||||||||| ||||    
T  17869619 ttgagtaaaatcctttgattttgattgcgattttacgtgtcccgattttgctcttcccttttgacctgaattagagtcccgattttgacaatcttg 17869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 21846157 - 21846050
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| || |  |||||||||| ||| ||||||||||  |||||| ||   |||||    
T  21846157 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttaagagtcccgattttgctattccctttcgacctggagtaaagtcctgatttt 21846058  T
Q  391 gacaacct 398  Q
    ||||||||    
T  21846057 gacaacct 21846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 405
Target Start/End: Complemental strand, 9954823 - 9954765
Alignment:
Q  347 cgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgttctc 405  Q
    |||||||||| ||| |||||||||| ||||||| || | ||||||||||||||||||||    
T  9954823 cgattttgctattccctttcgaccttaagtaaagtcccgattttgacaaccttgttctc 9954765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 9954898 - 9954828
Alignment:
Q  309 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 379  Q
    ||||||||||| ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||| |||||||    
T  9954898 gtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgaccttaagtaaa 9954828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 22789446 - 22789520
Alignment:
Q  308 agtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 382  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||| ||  || |||| ||||| |||| |||||    
T  22789446 agtaaaatcctttgattttgattgtgattttacgatttgcgatttttctaatcccttttgacctgaagtcaaatc 22789520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 27917577 - 27917496
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 131  Q
    |||||||||||| |||||||||||| |||||||||||||| | | ||| || ||||||||| || ||||| ||||| |||||    
T  27917577 ttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaat 27917496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 16125324 - 16125250
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 379  Q
    ||||||||||||||| ||||||| ||| |||||||||| |  | ||||| || ||| |||||||||| |||||||    
T  16125324 ttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttactattccctttcgacctgaagtaaa 16125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 39845135 - 39845061
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcga 368  Q
    ||||||| ||||||||||||||| ||  |||||  |||  ||||||| ||| ||||||||||| |||||||||||    
T  39845135 tacaaaaatagttgagtaaaatcattcaattttaattgcaattttacaattttcgattttgctattctctttcga 39845061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 16125379 - 16125343
Alignment:
Q  148 tccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||  ||||||||||    
T  16125379 tccatcgattttgattgcgattttacaatttcttata 16125343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 18304739 - 18304711
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  18304739 aaaatccatcgattttgattgcgatttta 18304711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 23528857 - 23528885
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  23528857 aaaatccatcgattttgattgcgatttta 23528885  T

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Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 31238107 - 31237929
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||   |||||||| |    
T  31238107 cattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaataggaa 31238008  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31238007 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatataccatttataacatat 31237929  T

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Target: chr2; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 46 - 220
Target Start/End: Original strand, 30432418 - 30432593
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| || |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||   ||||||| ||    
T  30432418 cattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagaca 30432517  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataaca 220  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  30432518 aaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccatttataaca 30432593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 1404782 - 1404960
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||   |||||||||||||||||||||| |||||||| ||||||| | ||| || |||    
T  1404782 cattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgca 1404881  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  1404882 aaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacaccatttataacatat 1404960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 36429847 - 36430025
Alignment:
Q  46 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| | ||||||| ||| ||||||||||||| | ||||||||||||||||||||||||| | ||||| |||||   ||||||||||    
T  36429847 cattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggca 36429946  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||| ||||| ||||||||    
T  36429947 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatcatttctaacatat 36430025  T

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Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 31578009 - 31578181
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||  |||||| || |||||| | | |||||||||||||||||| | |||||| ||||||||| | |||||| ||||||||    
T  31578009 ttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaatc 31578107  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  31578108 catcaattttgattgcaattttacgatttattataaactaagtcatttatgactatataccatttataacatat 31578181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 35566047 - 35565906
Alignment:
Q  82 aggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttctt 181  Q
    |||||||| | ||||||||||  ||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  35566047 aggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaaatccatcgattttgattgcagttttacgatttctt 35565948  T
Q  182 ataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  35565947 ataaacaaagtcatttatgactatatacaatttataacatat 35565906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 23863451 - 23863324
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| |||||||||||||||||| || ||||| | ||||||||||| |||||||||| ||||||||||||||||   ||||||||||    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  145 aaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||| |||||||||||    
T  23863351 aaatccatcgattttggttgcgatttta 23863324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 46 - 221
Target Start/End: Original strand, 20063713 - 20063889
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||  |||||||| | | |||| |   |||||||| |||||| |||| |||||||||||||||| | ||||||||||    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacat 221  Q
    |||| |||||||||| |||||||||||| | |||||||| ||| || |||||||||||| |||||||||||| ||||    
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacat 20063889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 15588931 - 15588809
Alignment:
Q  94 ctttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtc 193  Q
    ||||||||||||||||| |||||||| |||||||||||   ||||||| ||||||| |||| |||| |||||||||||| |||||| ||||||| |||||    
T  15588931 ctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagacaaaatcaatcgttttttattgcgattttacgatttcatataaactaagtc 15588832  T
Q  194 atttatgactatataccatttat 216  Q
    |||||||| ||||||||||||||    
T  15588831 atttatgattatataccatttat 15588809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 19491885 - 19491982
Alignment:
Q  74 taaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||| | |||||||||| ||| |||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||    
T  19491885 taaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggtaaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 1690768 - 1690680
Alignment:
Q  135 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  1690768 aaaataggcgaaacccattgattttgattgcgattttacgatttcttataaactaagtcttttatgactatataccatttataaaatat 1690680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 15588724 - 15588632
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacc 397  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||||| || |||||||||||||| ||| ||||||||||| |||||||||    
T  15588724 ttgagtaaaatccttcgattttggttgcgattttatgattgtcgatttttcttttctctttcgacctgaagcaaaatctcaatattgacaacc 15588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 25539340 - 25539222
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    |||| |||||| |||||||  | || ||| ||| |||||||||||||||||||| |||||||||| ||||| | |||||| |||||||||||||||||||    
T  25539340 ccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaatccatcgattttg 25539241  T
Q  161 attgcgattttaagatttc 179  Q
    | |||||||| | ||||||    
T  25539240 actgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 8428461 - 8428576
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| |||||||||| |||||||| ||||||||| ||||||| ||| |||||||  ||| | |||||| || ||| |||||||||||||| ||||||     
T  8428461 atattgattctacaaaaatagttgagcaaaatccttcgattttgattgcgattttagaatttttgatttttctattccctttcgacctaaagcaaaatcc 8428560  T
Q  384 caattttgacaacctt 399  Q
    | ||||||||||||||    
T  8428561 cgattttgacaacctt 8428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 1690894 - 1690785
Alignment:
Q  44 tccattattgtcaaaa-tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaatagg 142  Q
    |||||| ||||||||| ||||||||||||  |||||| |||||||||   ||||||||||||||| |||||||| |||||||||| ||| | ||||||||    
T  1690894 tccattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatagg 1690795  T
Q  143 caaaatccat 152  Q
    ||||| ||||    
T  1690794 caaaacccat 1690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 19245835 - 19245944
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||| |||||||||||| ||||||| ||| |||||||||||| | ||||||||| ||| ||||| || | ||| |||||| | |||||    
T  19245835 ttctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgatttttgattttgctattccctttcaacttgaagcaaaatcccgatttt 19245934  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  19245935 gacaaccttg 19245944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 1405029 - 1405137
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| || |  |||||||||| ||| |||| |||||||| |||| |||| |||||    
T  1405029 ttctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtaccgattttgctattcccttttgacctaaattaaagtctcgatttt 1405128  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  1405129 gacaacctt 1405137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 31023255 - 31023325
Alignment:
Q  78 atctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 148  Q
    |||||||||||| | ||||| ||||| ||||||||||||||| ||||||||||| | ||||||||||||||    
T  31023255 atctaggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaataggcaaaat 31023325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 20063969 - 20064078
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||| ||| ||||||| ||| |||||||||| | ||||||||||| ||| ||||| |||| |||||||  | | |||||    
T  20063969 ttctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgatttt 20064068  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  20064069 gacaaccttg 20064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 371
Target Start/End: Complemental strand, 35565840 - 35565757
Alignment:
Q  291 ttctacaaaattagttgagtaa---aatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 371  Q
    |||||||||| |||||||||||   ||||||| |||||| |||| |||||||| ||| ||||||||||||||||| ||||||||    
T  35565840 ttctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttacaattatcgattttgctcttctccttcgacct 35565757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 403
Target Start/End: Complemental strand, 23863352 - 23863261
Alignment:
Q  311 aaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgttc 403  Q
    ||||||| | ||||||||||| |||||||||| ||| ||||||||| |||||||||||| | ||| |||| | ||||||| ||||||||||||    
T  23863352 aaaatccatcgattttggttgcgattttacgaatgttgattttgcttttctctttcgacttgaagcaaaa-cccaattttaacaaccttgttc 23863261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 34841584 - 34841659
Alignment:
Q  74 taaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||| ||||||| | | ||||| ||||||||||||||||||||||||||| ||||||| |||| | ||||||||    
T  34841584 taaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaacatgcaaaatc 34841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 16766727 - 16766809
Alignment:
Q  63 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaa 145  Q
    |||||||||  |||||| ||||||||||| | ||| |||||||||||||| |||||||||||| ||||| | |||||| ||||    
T  16766727 gacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaataagcaa 16766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 13502556 - 13502448
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||| ||| ||||||  |||||| ||  |||||||||||| |||||||| |||||| ||||| || | ||  ||||| ||||||||    
T  13502556 ttctacaaaaatagttgactaatatccttcaattttgattacgattttacgattttcgattttactcttccctttccacttgaaacaaaat-tcaatttt 13502458  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  13502457 gacaaccttg 13502448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 25539028 - 25538920
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||| ||||||||||||| |||||| ||| ||||||||||    ||||||| || ||| |||||||||| | ||||| |  | |||||    
T  25539028 ttctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgagacccgatttttctattccctttcgacctgatgtaaagtaccgatttt 25538929  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  25538928 gacaacctt 25538920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 16767031 - 16767140
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacga-ttgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 389  Q
    ||||| |||| ||||||||||||||||||  |||||| ||| ||||||| || || |||||||||||||||  ||| ||||| ||| |||||  |||| |    
T  16767031 ttctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgatttttcgattttgctcttcctttttgacctgaagcaaaattccaatgt 16767130  T
Q  390 tgacaacctt 399  Q
    ||| ||||||    
T  16767131 tgaaaacctt 16767140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 19262199 - 19262086
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  |||||||||| ||| | |||||| | ||||||| |  | ||||     
T  19262199 ttctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgagtcccgattttgctattcccattcgacttgaagtaaagttccgatttc 19262100  T
Q  391 gacaaccttgttct 404  Q
    ||||||||||||||    
T  19262099 gacaaccttgttct 19262086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 392
Target Start/End: Complemental strand, 20034105 - 20034004
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||||||||||||||  |||||| ||| |||||||||| | |||||||||||  || |||||||| | ||||||| || | |||||    
T  20034105 ttctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacgagtctcgattttgctactccctttcgacttgaagtaaagtcccgatttt 20034006  T
Q  391 ga 392  Q
    ||    
T  20034005 ga 20034004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 15588782 - 15588742
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  15588782 aaaatccatcgattttgattgcgattttataatttcttata 15588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 27523979 - 27523891
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 379  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  || |||||||| | |||||||    
T  27523979 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaa 27523891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 35565885 - 35565845
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  35565885 aaaatccatcgattttgattgtgattttatgatttcttata 35565845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 5395749 - 5395674
Alignment:
Q  74 taaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||| ||||||||| | ||||| |||| ||| || ||||||||||||||| |||||   |||||||||||||||    
T  5395749 taaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaataggcaaaatc 5395674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 27406993 - 27407032
Alignment:
Q  145 aaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  27406993 aaatccatcaattttgattgcgattttatgatttcttata 27407032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 974584 - 974694
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacga-ttgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 389  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| ||  ||||||||||  || |||||||| | ||||||| || | || |    
T  974584 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtttccgattttgctactccctttcgacttgaagtaaagtcccgatat 974683  T
Q  390 tgacaaccttg 400  Q
    ||| |||||||    
T  974684 tgataaccttg 974694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 19492132 - 19492218
Alignment:
Q  309 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaa 395  Q
    ||||||||| | ||||||| ||  | |||||||||| |  |||||| | |||||||||||||| ||| ||||||| |||||||||||    
T  19492132 gtaaaatccatcgattttgattacggttttacgatttttaattttgttgttctctttcgacctgaagcaaaatcttaattttgacaa 19492218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 27407042 - 27407116
Alignment:
Q  296 caaaattagttgagtaaaatcctttgattttggttgtgattttacga-ttgtcgattttgctcttctctttcgac 369  Q
    ||||| |||||||||||||| ||| ||||||| ||| ||| |||||| || |||||||||||||||  |||||||    
T  27407042 caaaagtagttgagtaaaattcttggattttgattgcgatattacgatttttcgattttgctcttccttttcgac 27407116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 400
Target Start/End: Complemental strand, 1690570 - 1690509
Alignment:
Q  340 cgattgtcgattttgctcttctctttcgacctaaag-taaaatctcaattttgacaaccttg 400  Q
    ||||||| ||||||||||||||||||| |||| |||  |||||| | |||||||||||||||    
T  1690570 cgattgttgattttgctcttctctttcaacctgaagcaaaaatcccgattttgacaaccttg 1690509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 29660903 - 29660936
Alignment:
Q  56 aaaatccgacttaaattctaaaatctaggatttt 89  Q
    |||||||||||||||| |||||||||||||||||    
T  29660903 aaaatccgacttaaatcctaaaatctaggatttt 29660936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 5395507 - 5395475
Alignment:
Q  191 gtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||| |||||||||||||    
T  5395507 gtcatttatgactatatacaatttataacatat 5395475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 17995069 - 17995157
Alignment:
Q  60 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 148  Q
    |||||||||||  |||||||| || ||||| | | ||| |||||| |||||||||||||| | ||| | ||| | ||||||||||||||    
T  17995069 tccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaataggcaaaat 17995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 19245152 - 19245232
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 125  Q
    |||| |||||||||||| |||||||||| ||||||  |||||||||| |||||  ||| ||| | ||| ||||||||||||    
T  19245152 cattgttgtcaaaatcccgacttaaattttaaaattcaggattttacgactttactcatctttagcgattcaaatccatag 19245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 31062311 - 31062411
Alignment:
Q  295 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 394  Q
    |||||| ||||||||||||||| || ||||||| |||  || |||| ||| |  ||||| |||||| |||||||| | ||| |||||| ||||||| |||    
T  31062311 acaaaagtagttgagtaaaatctttcgattttgattgcaatgttacaattttttattttactcttccctttcgacatgaagcaaaatcccaattttaaca 31062410  T
Q  395 a 395  Q
    |    
T  31062411 a 31062411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 34841784 - 34841816
Alignment:
Q  146 aatccatcgattttgattgcgattttaagattt 178  Q
    ||||||||||||||||||||||||||| |||||    
T  34841784 aatccatcgattttgattgcgattttacgattt 34841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 31424162 - 31424340
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||| | ||||||||||||||||||||| ||||| | ||||||||||    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatataccaattataacatat 31424340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 22910316 - 22910154
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||||   |||||||||||||||||| |||||||    
T  22910316 ccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggcaaaatccattgattttg 22910217  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  22910216 attgcgattttaagatttcttataaattaagtaatttatgactatataccatttataacatat 22910154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 11879599 - 11879777
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||| | ||||||||| |||||||  |||||||| ||||||||||||| |||||||||||||||| |||||||||| | |||||||| |    
T  11879599 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11879698  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  11879699 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatat 11879777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 11897015 - 11897193
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||| | ||||||||| |||||||  |||||||| ||||||||||||| |||||||||||||||| |||||||||| | |||||||| |    
T  11897015 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11897114  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  11897115 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatataccatttataacatat 11897193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 15294685 - 15294847
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||  |||||||| | ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  15294685 ccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaatccatcgattttg 15294784  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| || |||| ||||||||    
T  15294785 attgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatat 15294847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 15475054 - 15475216
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||  |||||||| | ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  15475054 ccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaatccatcgattttg 15475153  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||| || |||| ||||||||    
T  15475154 attgcgattttacaatttcttataaactaagtcatttatgactatacactatttgtaacatat 15475216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 29384425 - 29384269
Alignment:
Q  66 ttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgc 165  Q
    |||||| |||||||||  |||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||    
T  29384425 ttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaaaattcatcga-tttgattgc 29384327  T
Q  166 gattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  29384326 gattttacgatttcttataaaacaattcatttatgactatataccatttataacatat 29384269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 5922047 - 5922226
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    ||||| |||||||||||| ||||||||| |||||||| ||||||||   |||||||||||||||||||||| | |||||||||||||| | ||||||| |    
T  5922047 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagac 5922146  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||||||||  |||||||||||||  | ||||||||||||||||||||||| |||||||||    
T  5922147 aaaatccatcgattttgattgcgattttgcgatttcttataaattaggtcatttatgactatataccattcataacatat 5922226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 19704537 - 19704407
Alignment:
Q  93 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 192  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  19704537 actttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaaatccatcgattttgattgcaattttacgatttcttataaaccaagt 19704438  T
Q  193 catttatgactatataccatttataacatat 223  Q
     ||||||||||||||||||||| ||||||||    
T  19704437 tatttatgactatataccatttgtaacatat 19704407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 45403033 - 45403206
Alignment:
Q  51 ttgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    ||||||||||| ||||||||||||||||||| | |||||| | |||||||| ||||||||||||| |||||||||| |||||   |||||| ||||||||    
T  45403033 ttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaaaatc 45403132  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||||  ||||||||||||||||||||    
T  45403133 catcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatataccatttataacatat 45403206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 23142224 - 23142352
Alignment:
Q  95 tttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtca 194  Q
    |||||||| ||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtca 23142323  T
Q  195 tttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||||||||    
T  23142324 tttatgactatataccatttataacatat 23142352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 3094379 - 3094195
Alignment:
Q  50 attgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 148  Q
    |||||||||||  ||||||||||  ||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  3094379 attgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaat 3094280  T
Q  149 ccatcgattttgattgcgattttaagatttct----------tataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||| ||||| |          ||||||| |||||||||||||||||||||||||||||||||||    
T  3094279 ccatcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatataccatttataacatat 3094195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 6810869 - 6810998
Alignment:
Q  93 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 192  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||||||| |||||||| |||||| ||||||| ||||    
T  6810869 actttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaatc-atcgattttgattacgattttacgatttcatataaactaagt 6810967  T
Q  193 catttatgactatataccatttataacatat 223  Q
    ||||||| |||||||| ||||||||||||||    
T  6810968 catttataactatatatcatttataacatat 6810998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 223
Target Start/End: Original strand, 32424354 - 32424509
Alignment:
Q  65 cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattg 164  Q
    ||||||||||||||| ||||||||||  ||||| ||||   | ||||| |||||| ||||||||||| | ||||||| ||||||  || |||||||||||    
T  32424354 cttaaattctaaaatttaggattttatgacttttttca---ttaacgattcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattg 32424450  T
Q  165 cgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  32424451 cgattttacgatttattatatactaagtcatttatgactatataccatttataacatat 32424509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 51 - 197
Target Start/End: Original strand, 17646997 - 17647144
Alignment:
Q  51 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||| |||||||||||  ||||||  |||||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||     
T  17646997 ttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaaaatt 17647096  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcattt 197  Q
    |||||||||||||||  |||| | ||||||||||||||| ||||||||    
T  17647097 catcgattttgattgttatttaacgatttcttataaacctagtcattt 17647144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 27836540 - 27836418
Alignment:
Q  99 ttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcattta 198  Q
    |||||||||||| ||| |||||||||||||||| | |||||| ||||||| |||| ||||||||| | ||||||  ||||||||||||| ||||||||||    
T  27836540 ttcaccttcaacaactgaaatccatagtagaattctaaaataagcaaaattcatcaattttgattacaattttacaatttcttataaactaagtcattta 27836441  T
Q  199 tgactatataccatttataacat 221  Q
    |||||||||||||||||||||||    
T  27836440 tgactatataccatttataacat 27836418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 29384195 - 29384086
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||| |||||| | |||||    
T  29384195 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttttctcttttctttcgacctgaagcaaaatcccgatttt 29384096  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  29384095 gacaaccttg 29384086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 94 - 223
Target Start/End: Complemental strand, 7489368 - 7489235
Alignment:
Q  94 ctttcttcaccttcaacgactcaaatccatagtagaat----acaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaacca 189  Q
    ||||||||||||||||||||| |||||| |||||||||    |  ||||||| ||||||  ||||||||||||||| |||||| |||||||||||||  |    
T  7489368 ctttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaatagacaaaatttatcgattttgattgcaattttatgatttcttataaatta 7489269  T
Q  190 agtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||| ||||||||||||||    
T  7489268 agtcatttatgactatatatcatttataacatat 7489235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 9212295 - 9212211
Alignment:
Q  135 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 219  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatataccatttataac 9212211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 17647243 - 17647351
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||| ||||||||||||| ||| |||||| | |||||    
T  17647243 ttctacaaaactagttgagtaaaatccttcgattttgattgcgattttatgattgtcgattttgctcatctctttcgacctgaagcaaaatcccgatttt 17647342  T
Q  391 gacaacctt 399  Q
     ||||||||    
T  17647343 aacaacctt 17647351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 15231867 - 15231976
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||||||||||| |  |||||| |||| ||||||||||||||||||||||||||||||||||||| | ||| |||||||| | |||    
T  15231867 ttctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgattgtcgattttgctcttctctttcgacttgaagcaaaatctcgaattt 15231966  T
Q  391 gacaaccttg 400  Q
     |||||||||    
T  15231967 aacaaccttg 15231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 399
Target Start/End: Original strand, 31424424 - 31424518
Alignment:
Q  302 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 399  Q
    ||||||||||||||||| |   |||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  31424424 tagttgagtaaaatcctgt---tttgattgcgattttacgattgtcgattttgctcatctctttcgacctgaagtaaaatctcgattttgacaacctt 31424518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 3094125 - 3094020
Alignment:
Q  293 ctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttga 392  Q
    |||||||| || |||||||||||||||  ||||| ||||   |||||||||||||||||||||||| ||||||| ||||||||||||||||  |||||||    
T  3094125 ctacaaaagtaattgagtaaaatccttcaatttttgttgcagttttacgattgtcgattttgctctactctttccacctaaagtaaaatcttgattttga 3094026  T
Q  393 caacct 398  Q
    ||||||    
T  3094025 caacct 3094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 6811065 - 6811142
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcga 368  Q
    |||||||||| ||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6811065 ttctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgattgtcgattttgctcttctctttcga 6811142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 22910086 - 22909978
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||||||| ||||||||||||||| | | |||||||| | |||||    
T  22910086 ttctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacgattgtcgatttttctcttctctttcgacatgatgtaaaatc-cgatttt 22909988  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  22909987 gacaaccttg 22909978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 6292456 - 6292294
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    |||||||||||  |||||| || ||||||   ||||| |||| ||| ||||||||||| |||||||| ||| | |||||| | ||||| || ||||||||    
T  6292456 ccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaattcaacgattttg 6292357  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||| | |||  |||| |||||| | ||||||||||| |||||||||||||||||| ||||    
T  6292356 attgcggtcttacaatttattataatctaagtcatttatcactatataccatttataaaatat 6292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 284 - 396
Target Start/End: Complemental strand, 24056460 - 24056348
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| ||   |||||| |||  || |||||||||||| |||||||||| ||| |||||||    
T  24056460 atattgattctacaaaactagttgagtaaaatccttcgattttgattaccattttatgatattcaattttgctcttccctttcgacctgaagcaaaatct 24056361  T
Q  384 caattttgacaac 396  Q
    |  ||||||||||    
T  24056360 cggttttgacaac 24056348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 9212206 - 9212141
Alignment:
Q  334 attttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 399  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||    
T  9212206 atttaacgattgtcgattttgctcttctctttcgaactaaaataaaattccaattttgacaacctt 9212141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 17566343 - 17566435
Alignment:
Q  290 gttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 382  Q
    ||||||||||| |||||||||||||| ||| ||||||| |||  ||||||||||| || |||||||||||| |||| ||||| ||| ||||||    
T  17566343 gttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttttgacctgaagcaaaatc 17566435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 24414170 - 24414062
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| | |  |||||||| ||| |||||||| | ||||||| |  |||||||    
T  24414170 ttctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgagtctaaattttgctattccctttcgacatgaagtaaagttccaatttt 24414071  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  24414070 gacaacctt 24414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 11879864 - 11879955
Alignment:
Q  309 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||| ||||||| ||| |||||||||| |  ||||||| || ||| |||| ||||| |||||||||| | |||||||||||||||    
T  11879864 gtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaaccttg 11879955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 400
Target Start/End: Original strand, 11897280 - 11897371
Alignment:
Q  309 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||| ||||||| ||| |||||||||| |  ||||||| || ||| |||| ||||| |||||||||| | |||||||||||||||    
T  11897280 gtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaatcccgattttgacaaccttg 11897371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 6292250 - 6292193
Alignment:
Q  333 gattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||| ||||||||||||||||||  |||||||||| |||||| ||||||||||||||    
T  6292250 gatttaacgattgtcgattttgctgatctctttcgatctaaagcaaaatctcaatttt 6292193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatcc 121  Q
    |||| |||||||||||| ||||||||| |||||||| ||||||||   ||||||||||||||||| |||| ||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 15761570 - 15761466
Alignment:
Q  45 ccattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    ||||| ||||||||||| |||||||||| ||||| || ||||||||   | ||| || |||||||||||||||||| ||||| | ||| | |||||||||    
T  15761570 ccattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaataggc 15761471  T
Q  144 aaaat 148  Q
    |||||    
T  15761470 aaaat 15761466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 29384240 - 29384200
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29384240 aaaatccatcgattttgattgcgattttacgatttcttata 29384200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 45403275 - 45403379
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  || |||||||||||| ||||||| ||| |||||||||| | ||||||||||| ||| |||||||| | || |||| || | |||||    
T  45403275 ttctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctattccctttcgacgtgaaataaagtcccgatttt 45403374  T
Q  391 gacaa 395  Q
    |||||    
T  45403375 gacaa 45403379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 388
Target Start/End: Complemental strand, 19704326 - 19704243
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatt 388  Q
    ||||||||| ||||||||||||| ||| |||||||||| |  |||||||||| ||| |||| ||| | |||||||||| |||||    
T  19704326 ttgagtaaattcctttgattttgattgcgattttacgagtcccgattttgctattccctttggacttgaagtaaaatcccaatt 19704243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 24056680 - 24056618
Alignment:
Q  63 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 125  Q
    ||||||||| |||||||| |||||||| | ||||| ||||| || ||||||||||||||||||    
T  24056680 gacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatag 24056618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 2040380 - 2040453
Alignment:
Q  306 tgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 379  Q
    |||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  ||||||||||| | |||||||    
T  2040380 tgagtaaaatccttcgattttgattgcgattttacgagttccgattttgctactctctttcgacttgaagtaaa 2040453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 15294865 - 15294910
Alignment:
Q  139 taggcaaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||    
T  15294865 taggtaaaatccatggattttgcttgcgattttaagatttcttata 15294910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 15475234 - 15475279
Alignment:
Q  139 taggcaaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||    
T  15475234 taggtaaaatccatggattttgcttgcgattttaagatttcttata 15475279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 15761241 - 15761132
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| || ||||||||||||||| |||||   ||| |||||||||||| || ||||   ||||| |||||| | | ||| |||||| |||||||    
T  15761241 ttctacaaaagtaattgagtaaaatccttcgatttatattgcgattttacgattctcaatttcattcttccctttcggcttgaagcaaaatcccaatttt 15761142  T
Q  391 gacaaccttg 400  Q
     |||||||||    
T  15761141 aacaaccttg 15761132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 16752269 - 16752370
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| |||||||||| |  | ||||||||  || |||||||| | ||||||| |  |||||||    
T  16752269 ttctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacgagtcccaattttgctactccctttcgacttgaagtaaagttccaatttt 16752368  T
Q  391 ga 392  Q
    ||    
T  16752369 ga 16752370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 15231774 - 15231850
Alignment:
Q  96 ttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgatttta 172  Q
    ||||||||||||||||||| |||| |||| || |||   ||||||||||||||||| |   ||||||||||||||||    
T  15231774 ttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgcgatttta 15231850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 17647198 - 17647238
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  17647198 aaaatccatcgattttgattgcgattttacaatttcttata 17647238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 19704390 - 19704350
Alignment:
Q  139 taggcaaaatccatcgattttgattgcgattttaagatttc 179  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  19704390 taggtaaaatccatcgattttgattgtgattttaagatttc 19704350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 7262008 - 7262073
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 356  Q
    |||||||||| |  |||||||||||||||| |||||| ||| |||||||||| |  ||||||||||    
T  7262008 ttctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgattttgct 7262073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 6811021 - 6811060
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  6811021 aaaatccatcgattttgattgcgattttca-atttcttata 6811060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 15761286 - 15761258
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  15761286 aaaatccatcgattttgattgcgatttta 15761258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 23142379 - 23142415
Alignment:
Q  148 tccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||  ||||||||||    
T  23142379 tccatcgattttgattgcgattttacaatttcttata 23142415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 26575000 - 26574896
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||||| || |||||  |||||||||||  |||||| ||| |||||||||||  || ||||| || || |||||| |||| ||||||||| || ||| |    
T  26575000 ttctacataaatagttaggtaaaatccttcaattttgattgcgattttacgatattcaatttttctattgtctttctacctgaagtaaaatatccattct 26574901  T
Q  391 gacaa 395  Q
    |||||    
T  26574900 gacaa 26574896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 44 - 212
Target Start/End: Original strand, 29067281 - 29067450
Alignment:
Q  44 tccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaatagg 142  Q
    |||||| |||||||||||| |||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||     
T  29067281 tccattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 29067380  T
Q  143 caaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccat 212  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  29067381 caaaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatataccat 29067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 39427906 - 39428079
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| || ||||||| |||||||  ||||||| ||||||||||||| |||||||||||||||| |||||||||| | ||||||| |||| ||    
T  39427906 ttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagtc 39428005  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  39428006 catcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatactacttataacatat 39428079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 44 - 223
Target Start/End: Complemental strand, 8156263 - 8156082
Alignment:
Q  44 tccattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaat-ag 141  Q
    |||||| |||||||||||| | |||||||||||||||  || ||||||| | ||| ||||||||||| ||||||||||||||||| ||| | ||||| ||    
T  8156263 tccattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattag 8156164  T
Q  142 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
     |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  8156163 acaaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatataccatttataacatat 8156082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 28745769 - 28745953
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| || |||||| ||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||   ||||||| ||    
T  28745769 cattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagaca 28745868  T
Q  145 aaatccatcgattttgattgcgattttaagatttc------ttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||||||||||||||| ||||||      |||||||| ||||||||||||||||||||| |||||||||||||    
T  28745869 aaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatactatttataacatat 28745953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 24620333 - 24620152
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggatttt---acaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaatag 141  Q
    |||| |||||||||| ||||||||||| ||||||| || ||||||   || ||||||||||||||||||||||||||| || ||||||||   |||||||    
T  24620333 cattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatag 24620234  T
Q  142 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  24620233 gcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatataccatttataaaatat 24620152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 25870205 - 25870096
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  25870205 ttctacaaacttagttgagtaaaatcctttgattttggttgcgattttacgattgtcgattttactcttctctttcgacctaaagcaaaatctcgatttt 25870106  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  25870105 gacaaccttg 25870096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 20756043 - 20756192
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||| ||||||  |||||||| | | ||||||||||||||| |||||||||||||||||||||   |||||||||||||||    
T  20756043 ttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaaaatc 20756142  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttat 199  Q
     ||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  20756143 aatcgattttgattgcaattttacgatttcttataaactaagtcatttat 20756192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 17064319 - 17064483
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    |||||| ||||||||||| |||||||||  ||||||  |||||||| | | | | ||||||||||||||||| ||| ||||||||||| | ||||||| |    
T  17064319 ccattaatgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagac 17064418  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatata 208  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17064419 aaaattcatcgatttttattgcgattttacgatttcttataaactaagtcatttatgactatata 17064483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 42696920 - 42697024
Alignment:
Q  119 tccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataa 218  Q
    |||||||||||||   |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataa 42697019  T
Q  219 catat 223  Q
    |||||    
T  42697020 catat 42697024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 21963444 - 21963590
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||  | |||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  21963444 ccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcgattttg 21963543  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatata 208  Q
    || ||||||||  ||||||||||  || ||||||||||||||||||||    
T  21963544 atagcgatttt-cgatttcttatttactaagtcatttatgactatata 21963590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 21985880 - 21986026
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||  | |||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  21985880 ccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcgattttg 21985979  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatata 208  Q
    || ||||||||  ||||||||||  || ||||||||||||||||||||    
T  21985980 atagcgatttt-cgatttcttatttactaagtcatttatgactatata 21986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 3449193 - 3449084
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  3449193 ttctacaaaagtagttgaataaaatcattcgattttggttgcgattttacgattgtcgattttgctcttctctttcaacctaaagcaaaatcccaatttt 3449094  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  3449093 gacaaccttg 3449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 22137295 - 22137450
Alignment:
Q  63 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgat 162  Q
    ||||||||| |||||||  | ||| |||| |||||||||||||| |||| ||||||||||||||| ||| | |||||| |||||||||||||||||| ||    
T  22137295 gacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaaaatccatcgattttaat 22137394  T
Q  163 tgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 219  Q
    |||||||||  ||||||||||  || ||||||||||||||||||||| |||||||||    
T  22137395 tgcgatttt-cgatttcttatttactaagtcatttatgactatatactatttataac 22137450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 17064546 - 17064661
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||||| |||| ||||||||||| ||| ||||||     
T  17064546 atattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgattttgatcttttctttcgacctgaagcaaaatcc 17064645  T
Q  384 caattttgacaacctt 399  Q
    ||||||||||||||||    
T  17064646 caattttgacaacctt 17064661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 202
Target Start/End: Complemental strand, 3449416 - 3449265
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| |||||||  |||||||| | |||||||| |||||||||| || ||||| |||||||||| | |||||||||||||||    
T  3449416 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaaatc 3449318  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgac 202  Q
    ||| |||||| |||||||||||| |||||||||||||  ||||||||| ||||    
T  3449317 catagatttttattgcgattttacgatttcttataaagtaagtcatttgtgac 3449265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 292 - 400
Target Start/End: Original strand, 41671426 - 41671534
Alignment:
Q  292 tctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttg 391  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||||||| ||| |||||| | ||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacctgaagcaaaatcccgattttg 41671525  T
Q  392 acaaccttg 400  Q
    |||||||||    
T  41671526 acaaccttg 41671534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 291 - 396
Target Start/End: Original strand, 22137523 - 22137628
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||| ||  |||||||| |||||    
T  22137523 ttctacaaaagtagttgagtaaaattctttgattttggttgtgattttactattgctgattttgctcttctctttcgacctgaaacaaaatctcgatttt 22137622  T
Q  391 gacaac 396  Q
    ||||||    
T  22137623 gacaac 22137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 22494892 - 22494740
Alignment:
Q  64 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 163  Q
    |||||||| |||||||||  |||||| | ||||| |||||||||||||||| |||| ||||||||||| | ||||||  |||||| ||||||||||||||    
T  22494892 acttaaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgatt 22494793  T
Q  164 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| |       |||||| |||||| ||||||||||||||||||||||||||||    
T  22494792 gcgattttacg-------ataaactaagtcagttatgactatataccatttataacatat 22494740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 30727813 - 30727694
Alignment:
Q  54 tcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccat 152  Q
    ||||||||| |||||||||  |||||||  | ||||||| |||||||||||||||||||||||||||| |||||||||| | ||||||| |||||| |||    
T  30727813 tcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaaaattcat 30727714  T
Q  153 cgattttgattgcgatttta 172  Q
    ||||||||||||||||||||    
T  30727713 cgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 21963677 - 21963778
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||| |||| || ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||| |||||    
T  21963677 ttctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacctgaaacaaaatctcgatttt 21963776  T
Q  391 ga 392  Q
    ||    
T  21963777 ga 21963778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 21986113 - 21986214
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||| |||| || ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||||| |||||    
T  21986113 ttctataaaagtaattgagtaaaattctttaattttggttgtgattttactattgtcgattttgctcttctctttcgacctgaaacaaaatctcgatttt 21986212  T
Q  391 ga 392  Q
    ||    
T  21986213 ga 21986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 24649814 - 24649684
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaat-aggcaaaat 148  Q
    |||||||||||| |||||||||  ||||||||||||||||   |||| |||||||||||||||||||||||||||||||||| | ||||| | |||||||    
T  24649814 ttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaataaagcaaaat 24649715  T
Q  149 ccatcgattttgattgcgattttaagatttc 179  Q
     |||| ||||||| || ||||||| ||||||    
T  24649714 tcatcaattttgactgtgattttacgatttc 24649684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 9152868 - 9152760
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||||| ||||| || ||||||||||  |||||||||||||| |||||| ||||||||||||||||| ||| ||||||   |||||    
T  9152868 ttctacaaaaatagttgagtcaaatctttcgattttggttacgattttacgattgttgattttactcttctctttcgacct-aagcaaaatcctgatttt 9152770  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  9152769 gacaaccttg 9152760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 15515296 - 15515208
Alignment:
Q  135 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||| ||||| | |||||||| | | |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15515296 aaaataggaaaaattcgtcgattttaacttcgatttcacgatttcttataaactaagtcatttatgactatataccatttataacatat 15515208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 15806635 - 15806531
Alignment:
Q  46 cattattgtcaaaatccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaa 145  Q
    |||| ||||||||||||||||||||| ||| |||| || ||||| | ||||| ||||||||||| ||||||||||||||| ||||| | |||| ||||||    
T  15806635 cattgttgtcaaaatccgacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaacaggcaa 15806536  T
Q  146 aatcc 150  Q
    |||||    
T  15806535 aatcc 15806531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 22356185 - 22356029
Alignment:
Q  44 tccattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttctt-caccttcaacgactcaaatccatagtagaatacaaaaatag 141  Q
    |||||| || ||||||| ||||||||||| |||||||  |||||||||  | ||| || || ||||||| | |  ||| ||||||||||| | ||||||     
T  22356185 tccattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataa 22356086  T
Q  142 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcattta 198  Q
    |||||||||||  |||||||||||||||||| |||||||||||||| ||||||||||    
T  22356085 gcaaaatccatgaattttgattgcgattttacgatttcttataaactaagtcattta 22356029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 42697094 - 42697204
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||| ||||||||||  ||||| |||| |||||||| |||||||||||| |||||||| |||||||| ||| ||||||   |||||    
T  42697094 ttctacaaaagtagttgaataaaatccttcaattttagttgcgattttacaattgtcgatttt-ctcttctcattcgacctgaagcaaaatcctgatttt 42697192  T
Q  391 gacaaccttgtt 402  Q
    ||||||||||||    
T  42697193 gacaaccttgtt 42697204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 8156010 - 8155904
Alignment:
Q  293 ctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttga 392  Q
    |||||||| |||||||||||||||||| ||| || |||| ||||||| ||||||| |||||||||||||||| | |||| ||| |||||   ||||||||    
T  8156010 ctacaaaagtagttgagtaaaatccttcgatcttagttgcgattttatgattgtccattttgctcttctcttaccacctgaagcaaaattctaattttga 8155911  T
Q  393 caacctt 399  Q
    |||||||    
T  8155910 caacctt 8155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 27090691 - 27090801
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgac 393  Q
    |||||||||  ||||||||||||||| ||||||  ||| ||| ||||||||  | ||||| || ||| ||||||||||||||||||||||| |||| |||    
T  27090691 tacaaaattccttgagtaaaatccttcgatttttattgcgatcttacgatttgcaatttttctattccctttcgacctaaagtaaaatctcgatttcgac 27090790  T
Q  394 aaccttgttct 404  Q
    |||||||||||    
T  27090791 aaccttgttct 27090801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 28746022 - 28746131
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||| ||| ||||||| ||| |||||||||| |  |||||||||| || ||||||||||| ||||||| || |||||||    
T  28746022 ttctacaaaagttcttgagtaaaattcttcgattttgattgcgattttacgagtcccgattttgctattttctttcgacctgaagtaaagtcccaatttt 28746121  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  28746122 gacaaccttg 28746131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 13286190 - 13286299
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||||||||||| |||||||||| ||| |||||||||| | | |||||| |||||| ||| |||||| ||| |||||    |||||    
T  13286190 ttctacaaaagtagttgagtaaaatcttttgattttgattgcgattttacgagttttgatttttctcttcccttccgacctgaagcaaaattgtgatttt 13286289  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  13286290 gacaaccttg 13286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 15515141 - 15515032
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||| |||| |||||||||||||| ||| |||||| |||  |||||||| ||||||||||||| || |||||||| |||| ||| |||||| | |||||    
T  15515141 ttctataaaagtagttgagtaaaatacttcgattttagttaagattttacaattgtcgattttggtcatctctttcaacctgaagcaaaatcccgatttt 15515042  T
Q  391 gacaaccttg 400  Q
     |||||||||    
T  15515041 aacaaccttg 15515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 17796376 - 17796477
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||| ||||| |||| ||||||| |||||||| ||||| ||||| | ||||||| ||    
T  17796376 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagaca 17796475  T
Q  145 aa 146  Q
    ||    
T  17796476 aa 17796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 19104816 - 19104917
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||| ||||| |||| ||||||| |||||||| ||||| ||||| | ||||||| ||    
T  19104816 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagaca 19104915  T
Q  145 aa 146  Q
    ||    
T  19104916 aa 19104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 25870506 - 25870356
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacga----ctcaaatccatagtagaatacaaaaata 140  Q
    |||| ||||||||||| |||||||||| |||||||| | ||||||   |||||||||| |||||||||    ||||||| | ||||||||    ||||||    
T  25870506 cattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaata 25870407  T
Q  141 ggcaaaatccatcgattt-----tgattgcgattttaagatttcttataaa 186  Q
    ||||||||||||||||||     |||||||||||||| |||||||||||||    
T  25870406 ggcaaaatccatcgatttgattttgattgcgattttacgatttcttataaa 25870356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 27676685 - 27676773
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 382  Q
    ||||||| ||||||||||||||| || ||||||| ||| ||||||| |||| ||||||||||||||| |||||||| | ||| ||||||    
T  27676685 tacaaaagtagttgagtaaaatctttcgattttgattgcgattttaagattttcgattttgctcttccctttcgacttgaagcaaaatc 27676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 28136011 - 28136117
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgac 393  Q
    ||||||| |||||||||||||||||| ||||||| | | |||||||||||| |||||||| |||| |  |||  || | ||||||||||  |||||||||    
T  28136011 tacaaaagtagttgagtaaaatccttcgattttgatagcgattttacgattctcgattttactctaccattttaacttgaagtaaaatcctaattttgac 28136110  T
Q  394 aaccttg 400  Q
    |||||||    
T  28136111 aaccttg 28136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 8592282 - 8592173
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| | ||||||||||| ||  |||||||| | ||||||| || | ||||     
T  8592282 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtctcgattttgctatttcctttcgacttgaagtaaagtcccgatttc 8592183  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  8592182 gacaaccttg 8592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| |||||||||  ||||||  |||||||| | ||||| ||||||||| | ||||||||||||||| ||||| | |||||||| |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  145 aaatcc 150  Q
    ||||||    
T  27676455 aaatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 10872598 - 10872490
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||| ||||| ||||| ||||||||||||  |||||| ||| ||||||| |||| | |||||| |||||| |||| ||||| ||||||||||   |||||    
T  10872598 ttcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttatgatttttgatttttctcttcccttttgacctgaagtaaaatcctgatttt 10872499  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  10872498 gacaacctt 10872490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 17796811 - 17796918
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||| ||| ||||||  |||  ||||||||||| |  ||||| || ||| |||||||||| ||  ||||||||||||||    
T  17796811 ttctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaatcaaaatctcaatttt 17796910  T
Q  391 gacaacct 398  Q
    || |||||    
T  17796911 gataacct 17796918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 19105251 - 19105358
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||| ||| ||||||  |||  ||||||||||| |  ||||| || ||| |||||||||| ||  ||||||||||||||    
T  19105251 ttctacaaaagtagttgagtaaaatgcttcgattttaattgcaattttacgattttttatttttcttttccctttcgacctgaatcaaaatctcaatttt 19105350  T
Q  391 gacaacct 398  Q
    || |||||    
T  19105351 gataacct 19105358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 6136452 - 6136387
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 356  Q
    ||||| |||| ||||||||||||||| |||||||||| ||| |||||||||||| | |||||||||    
T  6136452 ttctataaaagtagttgagtaaaatcttttgattttgattgcgattttacgatttttgattttgct 6136387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 17796267 - 17796368
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||   ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  17796267 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagaca 17796366  T
Q  145 aa 146  Q
    ||    
T  17796367 aa 17796368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 19104707 - 19104808
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||   ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  19104707 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagaca 19104806  T
Q  145 aa 146  Q
    ||    
T  19104807 aa 19104808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 10873022 - 10872971
Alignment:
Q  99 ttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 150  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||||||||    
T  10873022 ttcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 400
Target Start/End: Complemental strand, 20766770 - 20766675
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    |||||||||||  || ||||||| ||| |||||||||| | |||||||||||  ||||||||||  | ||||||| || | |||||||||||||||    
T  20766770 ttgagtaaaatttttcgattttgattgcgattttacgagtctcgattttgctactctctttcgagttgaagtaaagtcccgattttgacaaccttg 20766675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 3041469 - 3041570
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  ||  ||||||| | |||||||||| | |||||    
T  3041469 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaaatcccgatttt 3041568  T
Q  391 ga 392  Q
    ||    
T  3041569 ga 3041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 17796485 - 17796586
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||||||||||  ||| ||||||  |||||||||||||||| | ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  17796485 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagaca 17796584  T
Q  145 aa 146  Q
    ||    
T  17796585 aa 17796586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 19104925 - 19105026
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||||||||||  ||| ||||||  |||||||||||||||| | ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||| ||    
T  19104925 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagaca 19105024  T
Q  145 aa 146  Q
    ||    
T  19105025 aa 19105026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 6136497 - 6136457
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  6136497 aaaatccatcgattttgattgtgattttacgatttcttata 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 400
Target Start/End: Complemental strand, 8560347 - 8560231
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| ||||||||||    ||||||||||||||| ||||||| ||| ||||| |||| | |||||||||||  || |||| ||| | ||||||| ||     
T  8560347 atattgattctacaaaaaaccttgagtaaaatccttcgattttgattgcgatttcacgagtctcgattttgctactcccttttgacttgaagtaaagtcc 8560248  T
Q  384 caattttgacaaccttg 400  Q
    | ||||||| |||||||    
T  8560247 cgattttgataaccttg 8560231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 19348818 - 19348906
Alignment:
Q  310 taaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacct 398  Q
    ||||||||||  |||||| ||| |||||||||| | |||||||||||  || |||| ||| | ||||||| |||||||||||| |||||    
T  19348818 taaaatccttccattttgattgcgattttacgagtctcgattttgctactcccttttgacttgaagtaaagtctcaattttgataacct 19348906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 403
Target Start/End: Original strand, 22971055 - 22971166
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  || ||||  || | ||||||| || |||||||    
T  22971055 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactc-cttttaacttgaagtaaagtcccaatttt 22971153  T
Q  391 gacaaccttgttc 403  Q
    || ||||||||||    
T  22971154 gataaccttgttc 22971166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 25870250 - 25870210
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  25870250 aaaatccatcgattttgattgcgattttacaatttcttata 25870210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 42697049 - 42697089
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  42697049 aaaatccatcgattttgattgcgagtttatgatttcttata 42697089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 400
Target Start/End: Complemental strand, 15806281 - 15806222
Alignment:
Q  341 gattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    |||| ||||||||||| ||| ||||||| || ||| |||||||| |||||||||||||||    
T  15806281 gattttcgattttgcttttccctttcgagctgaagcaaaatctcgattttgacaaccttg 15806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 24649574 - 24649523
Alignment:
Q  349 attttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    |||||||| ||| |||||||||| ||||||| || |||||||||||||||||    
T  24649574 attttgctattccctttcgacctgaagtaaagtcccaattttgacaaccttg 24649523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 9152985 - 9152935
Alignment:
Q  173 agatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||| |||| ||||||||||||||| ||| |||| |||||    
T  9152985 agatttcttataaactaagttatttatgactatatatcatgtatagcatat 9152935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 375
Target Start/End: Original strand, 13006089 - 13006155
Alignment:
Q  309 gtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaag 375  Q
    |||||||| ||  |||||| ||| |||||||||||| || |||||||| ||| ||||||||||||||    
T  13006089 gtaaaatcattcaattttgattgcgattttacgattttcaattttgctattccctttcgacctaaag 13006155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 29067523 - 29067631
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||| | ||| ||||||| || |  |||||||||| ||| | |||||||| ||||||| |  | |||||    
T  29067523 ttctacaaaaatccttgagtaaaatccttcgattt-gattgagattttatgagttccgattttgctattcccattcgacctgaagtaaagttccgatttt 29067621  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  29067622 gacaaccttg 29067631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 6861065 - 6861033
Alignment:
Q  146 aatccatcgattttgattgcgattttaagattt 178  Q
    ||||||||||||||||||||||||||| |||||    
T  6861065 aatccatcgattttgattgcgattttatgattt 6861033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 13286145 - 13286185
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  13286145 aaaatccatcgattttcattgtgattttacgatttcttata 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 17064508 - 17064548
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||| ||||||  ||||||||||    
T  17064508 aaaatccatcgattttgattgcaattttacaatttcttata 17064548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 20756223 - 20756251
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  20756223 aaaatccatcgattttgattgcgatttta 20756251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 24620080 - 24619972
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||| | |  | |||||||| ||| |||| ||| | ||||||| |  | |||||    
T  24620080 ttctacaaaagtctttgagtaaaatccttcgattttgattgcgattttacaagtcccaattttgctattcccttttgacttgaagtaaagttccgatttt 24619981  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  24619980 gacaacctt 24619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 27676572 - 27676612
Alignment:
Q  183 taaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||| |||||||||||||||||||  |||||||||||||    
T  27676572 taaaccgagtcatttatgactatatataatttataacatat 27676612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||| ||||||||||| ||||||| |||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 28745977 - 28746005
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  28745977 aaaatccatcgattttgattgcgatttta 28746005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 29067478 - 29067506
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  29067478 aaaatccatcgattttgattgcgatttta 29067506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 39428104 - 39428132
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  39428104 aaaatccatcgattttgattgcgatttta 39428132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 24725607 - 24725429
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| |||||||| | |||||||| |||||||||||||||||| ||||||||||||||||||||   ||||||||||    
T  24725607 cattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggca 24725508  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| ||||||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24725507 aaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatataccatttataacatat 24725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 27221436 - 27221595
Alignment:
Q  64 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 163  Q
    ||||||||||||||||  |||||||| | |||||||||| |||||||||||||||| |||||||||||   ||||| |||||||||||||||||||||||    
T  27221436 acttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggcaaaatccatcgattttgatt 27221535  T
Q  164 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27221536 gcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 27221595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 14055269 - 14055428
Alignment:
Q  64 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 163  Q
    ||||| || |||||||| | |||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||    
T  14055269 acttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggcaaaatccatagattttgatt 14055368  T
Q  164 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  14055369 gcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatat 14055428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 14365297 - 14365456
Alignment:
Q  64 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 163  Q
    ||||| || |||||||| | |||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||    
T  14365297 acttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggcaaaatccatagattttgatt 14365396  T
Q  164 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  14365397 gcgattttacgacttcttataaactaagtcatttatgactatataccatttataacatat 14365456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 24990196 - 24990023
Alignment:
Q  51 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||| ||||||||||| | ||||| |||||||||   |||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||    
T  24990196 ttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaaaatc 24990097  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||| |||||| |||||||||||||| || |||||||||||||||||| |||||||||||||    
T  24990096 catcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatactatttataacatat 24990023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 26281440 - 26281266
Alignment:
Q  45 ccattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    ||||| |||||||||| |||||||||||  ||||||  |||||||| | ||||||||||||||||||||||||||||||| ||||||| | |||||| ||    
T  26281440 ccattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagc 26281341  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataac 219  Q
    ||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  26281340 aaaatccatcgattttg-ttgcgatttaacgatttcttataaactaagtcatttatgactatataccatttataac 26281266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 5058533 - 5058706
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| |||||||  || ||||| | | |||||||||||||||||||  ||||||||||||||||   |||||||||||||||    
T  5058533 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaaatc 5058632  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |  |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5058633 ctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 5058706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 44944974 - 44944797
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcac----cttcaacgactcaaatccatagtagaatacaaaaataggcaa 145  Q
    |||||||||||| ||||||||| |||||||  |||||||| | |||||||||||    ||||||||| |||||||||||||||||| | ||||||| |||    
T  44944974 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatagtcaa 44944875  T
Q  146 aatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44944874 aatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatataccatttataacatat 44944797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 8346658 - 8346484
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||| |||||  |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  8346658 ttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaatc 8346559  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacca-tttataacatat 223  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||| |||| ||||||| || ||||||||||||    
T  8346558 catcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatat 8346484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 4247376 - 4247533
Alignment:
Q  66 ttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgc 165  Q
    |||||| |||||||  ||||||||  |||||||||||| |||||| ||| |||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  4247376 ttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaaaattcatcgattttgattgc 4247475  T
Q  166 gattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  4247476 gattttatgatttcttataaactaagtcatttatgactatatatcatttgtaacatat 4247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 8330185 - 8329996
Alignment:
Q  36 tcttctaatccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaataca 134  Q
    ||||||||  |||| |||||||||||| ||| |||||||||||||  | |||||| | |||||||||||||||||||| |||||||||||||||||| |     
T  8330185 tcttctaaatcattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatccc 8330086  T
Q  135 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacca-tttataacatat 223  Q
    |||||||| ||||| ||| |||||| |||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  8330085 aaaataggaaaaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatat 8329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 8343940 - 8343761
Alignment:
Q  36 tcttctaatccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaataca 134  Q
    |||||||| ||||| |||||||||||  | | ||||| ||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||| |     
T  8343940 tcttctaaaccattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatccc 8343841  T
Q  135 aaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccattt 214  Q
    |||||| | |||||||||| ||||| |||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||    
T  8343840 aaaatatgaaaaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattt 8343761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 5715294 - 5715466
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| |||||||  |||||||| | ||||| | |||||||||| ||| |||| ||||||||||| | |||||| |||||||     
T  5715294 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaaaatt 5715392  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  5715393 catcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatataccatttataacatat 5715466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 9685374 - 9685220
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||||||||||| ||||||| || ||||||| ||||||||| | ||||| |||||||||||||||||||||||||| ||||||   ||||||| ||    
T  9685374 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 9685275  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttat 199  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  9685274 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcatttat 9685220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 17811394 - 17811524
Alignment:
Q  93 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 192  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  17811394 acttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttacgatttcttataaactaagt 17811493  T
Q  193 catttatgactatataccatttataacatat 223  Q
    ||||||| | |||||||||||||||| ||||    
T  17811494 catttataattatataccatttataaaatat 17811524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 11324994 - 11325148
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||  | ||||||   | |||||||||||||||||||||||||||||| |||||| | |||||||||||||| |||  ||||||    
T  11324994 ccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcata-attttg 11325092  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttat 216  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  11325093 attgcgaatttacgatttcttataaactaagtcatttatgactatataccaattat 11325148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 39182259 - 39182397
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||| |||||||| ||||||||| ||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||| |||||||||||  ||||||||||    
T  39182358 aaatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 7730472 - 7730319
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| |||||||| ||| |||| | |||||||||||||| ||| ||||||||||| |||||||| | |||||||| |    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttat 199  Q
    |||||||||||||||||||| ||||||| |||||||||||||| || ||||||||    
T  7730373 aaatccatcgattttgattgagattttacgatttcttataaactaaatcatttat 7730319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 27510052 - 27509914
Alignment:
Q  66 ttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgc 165  Q
    ||||||||||||||  |||||||| | | ||||||||| | |||||| ||||||| ||||||||||  ||||||||||||||| |||| |||||||||||    
T  27510052 ttaaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgc 27509953  T
Q  166 gattttaagatttcttataaaccaagtcatttatgacta 204  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  27509952 gattttacgatttcttataaactaagtcatttatgacta 27509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 20570944 - 20570837
Alignment:
Q  116 aaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccattta 215  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||||||||||||||    
T  20570944 aaatctatagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatataccattta 20570845  T
Q  216 taacatat 223  Q
    ||||||||    
T  20570844 taacatat 20570837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 22687789 - 22687631
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| |||||||  |||| ||| | |||||||||| ||||||| |||||||||||| | ||||| | |||||||||||||||    
T  22687789 ttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaaaatc 22687690  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatata 208  Q
    ||||||||||||||||||||||| ||||||||| |||| ||  | || |||||||||||    
T  22687689 catcgattttgattgcgattttacgatttcttacaaactaaaaccttgatgactatata 22687631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 172
Target Start/End: Original strand, 11326390 - 11326512
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| | ||||||| ||||||| ||||||||| | |||||||||||||||| ||||| ||||||||||||||||   |||||||||||||||    
T  11326390 ttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaaaatc 11326489  T
Q  150 catcgattttgattgcgatttta 172  Q
     ||||||||||||||||||||||    
T  11326490 tatcgattttgattgcgatttta 11326512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 39182402 - 39182511
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || ||| |||||| | |||||    
T  39182402 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattgtcgatttttctcttctctttggaactgaagcaaaatcacgatttt 39182501  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  39182502 gacaaccttg 39182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 14055503 - 14055610
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||| |||||| | |||||    
T  14055503 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagcaaaatc-cgatttt 14055601  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  14055602 gacaacctt 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 14365531 - 14365638
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||| |||||| | |||||    
T  14365531 ttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagcaaaatc-cgatttt 14365629  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  14365630 gacaacctt 14365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 8571258 - 8571367
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    |||||||||||  ||||||| |||||||| | |||||||||||||| |||||||||||||||||||||||| | |||||||  |||| ||||||||||||    
T  8571258 ccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccatcgattttg 8571357  T
Q  161 attgcgattt 170  Q
    ||||||||||    
T  8571358 attgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 22687150 - 22687042
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||| | |||||    
T  22687150 ttctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgattctcgattttgctcttctctttcgatctgaagcaaaatcccgatttt 22687051  T
Q  391 gacaacctt 399  Q
     ||||||||    
T  22687050 aacaacctt 22687042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 1977707 - 1977790
Alignment:
Q  101 caccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||||||||||||| | |||||| ||||||| | ||||||||||||||||||||| |||||||||||    
T  1977707 caccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 21846550 - 21846433
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||||||||||  |||||||| | ||||| ||||| |||||||||||| |||||||||||||| | |||| ||| ||||||    
T  21846550 ttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaaaatc 21846452  T
Q  150 catcgattttgattgcgat 168  Q
     ||||||||||||||||||    
T  21846451 aatcgattttgattgcgat 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 4574976 - 4575083
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||| ||| ||||||||||| ||| |||||||||||| | |||||| || ||| ||||| |||| ||| ||||||||||||||    
T  4574976 ttctacaaaagtagttgagtagaattctttgattttgattgcgattttacgatttttgattttactattccctttcaacctgaagaaaaatctcaatttt 4575075  T
Q  391 gacaacct 398  Q
    ||||||||    
T  4575076 gacaacct 4575083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 1977808 - 1977886
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  1977808 ttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttttctcttctctttcgacctgaagcaaaatct 1977886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 400
Target Start/End: Original strand, 11325235 - 11325333
Alignment:
Q  302 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||||| ||||  | |||||||| ||||||||||||||||||||||||||||||||| ||| | ||| || ||| |||||||||||||||||    
T  11325235 tagttgagtaaaacccttgaaatttggttgcgattttacgattgtcgattttgctcttctcttttgacgtgaagcaagatcccaattttgacaaccttg 11325333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 401
Target Start/End: Complemental strand, 10285756 - 10285676
Alignment:
Q  321 gattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgt 401  Q
    ||||||| ||| |||||||||||||| |||||| ||||||||||||||||| |||||||||| | ||||||||||||||||    
T  10285756 gattttgattgcgattttacgattgttgatttttctcttctctttcgacctgaagtaaaatcccgattttgacaaccttgt 10285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 26565438 - 26565323
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| ||  |||||||||||| ||| ||||| ||||| ||||  |||| ||| || |||     
T  26565438 atattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattttcgtttttgttcttcccttttaacctgaagaaagatcc 26565339  T
Q  384 caattttgacaacctt 399  Q
    ||||||||||||||||    
T  26565338 caattttgacaacctt 26565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 397
Target Start/End: Original strand, 8304332 - 8304438
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| |||||||||||||| |  ||||||||||  ||||||||||| | ||||||| |||| |||||    
T  8304332 ttctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcgacttgaagtaaagtctcgatttt 8304431  T
Q  391 gacaacc 397  Q
    |||||||    
T  8304432 gacaacc 8304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 6916847 - 6916956
Alignment:
Q  111 gactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacc 210  Q
    ||||||||| ||||||||||| | ||||  |  ||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||| ||| ||    
T  6916847 gactcaaattcatagtagaattctaaaa--gttaaaatccatcggttttgattgcgattttacgatttcttataaattaagtcatttatgact-tattcc 6916943  T
Q  211 atttataacatat 223  Q
    | |||||||||||    
T  6916944 agttataacatat 6916956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 63 - 223
Target Start/End: Complemental strand, 26617588 - 26617428
Alignment:
Q  63 gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccata--gtagaatacaaaaata--ggcaaaatccatcgattt 158  Q
    ||||| ||| |||||||  |||||||| | ||||| |||||||||||||||  |||| ||||  ||||||| | ||||||  ||||||||| ||||||||    
T  26617588 gactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatataggcaaaatctatcgattt 26617489  T
Q  159 tgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||| ||  |||| || || |||||||||||||||||    ||||||||||||||    
T  26617488 tgattgcgattttacgagatcttgtagactaagtcatttatgactat----catttataacatat 26617428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 8329862 - 8329763
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||||||||||||||  |||||| |||  |||||| ||||||| |||||| | ||||||||| |||| ||| ||||||||||||||    
T  8329862 ttctacaaaagtagttgagtaaaatccttcaattttgattgcaattttatgattgtcaattttgttattctctttccacctcaagcaaaatctcaatttt 8329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 8343685 - 8343595
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaat 381  Q
    |||||||||| |||||||||||||| ||| ||||||| |||   ||||||||||||| |||||| |||||||||||||||| ||| |||||    
T  8343685 ttctacaaaagtagttgagtaaaatacttcgattttgattgcatttttacgattgtcaattttgttcttctctttcgacctgaagcaaaat 8343595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 371
Target Start/End: Complemental strand, 7730239 - 7730162
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 371  Q
    ||||||| ||||||||||||| | || ||||||||||| |||||||||||||  |||||||||||||||||| |||||    
T  7730239 tacaaaagtagttgagtaaaaccattcgattttggttgcgattttacgattgatgattttgctcttctcttttgacct 7730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 8346349 - 8346236
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||| |||| |||||||||||||||||| ||||||| |||   | ||||||||||| |||||| |||||||||||||||  ||||||||||   |||||    
T  8346349 ttctataaaagtagttgagtaaaatccttcgattttgtttgcattcttacgattgtcaattttgttcttctctttcgaccggaagtaaaatcctgatttt 8346250  T
Q  391 gacaaccttgttct 404  Q
     ||||| |||||||    
T  8346249 aacaactttgttct 8346236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 371
Target Start/End: Complemental strand, 21846330 - 21846250
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 371  Q
    ||||| |||| ||||||| |||||||||| ||||||||||| ||||||| |||| | ||||||||||| ||||||||||||    
T  21846330 ttctataaaagtagttgattaaaatccttcgattttggttgcgattttaggatttttgattttgctctcctctttcgacct 21846250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 8630088 - 8630002
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 131  Q
    |||| ||||||||||| |||||||| | | ||||||||||||||| |||||||  | | ||||||||||||||||||||||||||||    
T  8630088 cattgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaat 8630002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 8329927 - 8329874
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 344  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  8329927 ttctacaaaagtagttgagtaaaatcctttgattttgattgcgattttacgatt 8329874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 396
Target Start/End: Original strand, 17741890 - 17741997
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttc--tctttcgacctaaagtaaaatctcaatt 388  Q
    ||||| |||| ||||| ||||||||||||  |||||| |||  ||||||||||| ||||||||||| |||  ||||||||||| ||||||||||  ||||    
T  17741890 ttctaaaaaagtagttaagtaaaatccttcaattttgattgcaattttacgattttcgattttgctattctttctttcgacctgaagtaaaatcctaatt 17741989  T
Q  389 ttgacaac 396  Q
    || |||||    
T  17741990 ttaacaac 17741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 17811594 - 17811702
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  |||||||||| ||| |||| ||||| ||||||| || | |||||    
T  17811594 ttctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacgaatcccgattttgctattcccttttgacctgaagtaaagtcccgatttt 17811693  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  17811694 gacaacctt 17811702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 24989640 - 24989549
Alignment:
Q  308 agtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 399  Q
    |||||||||||| ||||||| |||  ||||||||| |  |||||||| | ||| |||||||||||||||||| || | ||||||||||||||    
T  24989640 agtaaaatccttcgattttgattgccattttacgagtcccgattttgttattccctttcgacctaaagtaaagtcccgattttgacaacctt 24989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 4247552 - 4247597
Alignment:
Q  139 taggcaaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  4247552 taggtaaaatccatcgattttgattgcgattttatgatttcttata 4247597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 8346414 - 8346361
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 344  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||| ||||||||    
T  8346414 ttctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacgatt 8346361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 26617360 - 26617251
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| || ||||| |||||||||||| ||| |||| |||||| |||||| || ||||||  || || || ||||| ||| |||||  |||||||    
T  26617360 ttctacaaaaataattgagcaaaatcctttgaatttagttgcgatttttcgattggcggttttgcaattatcatttgacctgaagcaaaattccaatttt 26617261  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  26617260 gacaaccttg 26617251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 371
Target Start/End: Original strand, 30294492 - 30294571
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 371  Q
    ||||| |||| ||||| |||||||||||| ||||||| |||||| ||||||||| | ||||||||||||| || |||||||    
T  30294492 ttctataaaagtagttaagtaaaatccttcgattttgattgtga-tttacgatttttgattttgctcttccctctcgacct 30294571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 27221676 - 27221743
Alignment:
Q  307 gagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaa 374  Q
    ||||||||||||| ||||||| ||| |||||||||| |  |||||||||| | |||||||||||||||    
T  27221676 gagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctatactctttcgacctaaa 27221743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 4247602 - 4247711
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||||||||||||||||| |||| ||| |||||||||| |  | |||||  | ||| |||||||| | ||||||| || |||||||    
T  4247602 ttctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacgaatcccaatttttgtattccctttcgacttgaagtaaagtcccaatttt 4247701  T
Q  391 gacaaccttg 400  Q
    ||||| ||||    
T  4247702 gacaatcttg 4247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 399
Target Start/End: Original strand, 5058778 - 5058882
Alignment:
Q  295 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 394  Q
    ||||||||  |||| |||||||||| ||||||| |||  ||||||||| |  |||||||||| ||| |||| || || ||||||| || | |||||||||    
T  5058778 acaaaattccttgattaaaatccttcgattttgattgcaattttacgaattccgattttgctattcccttttgatctgaagtaaagtcccgattttgaca 5058877  T
Q  395 acctt 399  Q
    |||||    
T  5058878 acctt 5058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 8254037 - 8253958
Alignment:
Q  321 gattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||| ||| |||||||||| | |||||||||||  || |||||||  ||||||||| | |||||||||| |||||||    
T  8254037 gattttgattgcgattttacgagtctcgattttgctactccctttcgatttaaagtaaagtatcaattttgataaccttg 8253958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 3696766 - 3696684
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaa 373  Q
    ||||||||||||| ||||||| |||||| | |||||||||||||| ||| | ||  |||| ||||| | ||||||||| ||||    
T  3696766 ttctacaaaattaattgagtagaatcctataattttggttgtgatcttatgttttacgatcttgctatcctctttcgatctaa 3696684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 21846432 - 21846398
Alignment:
Q  189 aagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||| ||||||||||||||    
T  21846432 aagtcatttatgactatatatcatttataacatat 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 25842599 - 25842505
Alignment:
Q  306 tgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    |||||||||||||   |||||| ||| |||||||||| |  ||||||||||  || |||||||| | ||||||| || ||||||||| |||||||    
T  25842599 tgagtaaaatcctccaattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaagtcccaattttgataaccttg 25842505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 21157576 - 21157523
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 344  Q
    |||||||||| ||||||| ||||||||||  |||||| ||| ||||||||||||    
T  21157576 ttctacaaaagtagttgaataaaatccttcaattttgattgagattttacgatt 21157523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 7730287 - 7730247
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  7730287 aaaatccatcaattttgattgcgattttacaatttcttata 7730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 8329907 - 8329867
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||| | ||||||||||||||||||| |||||||||||    
T  8329907 aaaatcctttgattttgattgcgattttacgatttcttata 8329867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 8329972 - 8329932
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  8329972 aaaatccattgattttgattgcaattttacgatttcttata 8329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 17811549 - 17811577
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  17811549 aaaatccatcgattttgattgcgatttta 17811577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 21846375 - 21846335
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  21846375 aaaatccatcaattttgattgtgattttacgatttcttata 21846335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 24725355 - 24725307
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgatttta 339  Q
    |||||||||| |  ||||||||||||||||||||||| ||| |||||||    
T  24725355 ttctacaaaagtccttgagtaaaatcctttgattttgattgcgatttta 24725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 24725400 - 24725372
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  24725400 aaaatccatcgattttgattgcgatttta 24725372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 24989701 - 24989673
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  24989701 aaaatccatcgattttgattgcgatttta 24989673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 23897826 - 23897988
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||  |||||||| | ||||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  23897826 ccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaatccatcgattttg 23897925  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23897926 attgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 23897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 30912542 - 30912364
Alignment:
Q  46 cattattgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| | ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||   ||||||||||    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatcatttatcacatat 30912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 17250072 - 17250219
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||| ||| |||||||    
T  17250072 ccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaaaattcattgattttg 17250171  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatata 208  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17250172 attgcgattttacgatttcttataaactaagtcatttatgactatata 17250219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 15528235 - 15528062
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| |||||||  |||||||| | |||||||||||||| ||||||| |||| |||||||||||   ||||||| |||||||    
T  15528235 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaaaatc 15528136  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  15528135 catcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatataccatttataacatat 15528062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 26053421 - 26053248
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||  |||||||||||||||| | ||||||||||||||||| ||||||||| |||| |||||| | |||||| ||||||||    
T  26053421 ttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaaaatc 26053322  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||  |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  26053321 catcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatat 26053248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 26073474 - 26073301
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||  |||||||||||||||| | ||||||||||||||||| ||||||||| |||| |||||| | |||||| ||||||||    
T  26073474 ttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaaaatc 26073375  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||  |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  26073374 catcaattttgattgtcattttacgatttcttataaactaagttatttatgactatataccatttataacatat 26073301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 7223518 - 7223689
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| ||||||| ||||||||| | |||||||||||||       || |||||||||||||||| | |||||| |||    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataacatat 7223689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 17543870 - 17543692
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||||||||||| |||||||||| |||||||  |||||||| | ||||| ||||| |||||||||||||||||||||||||||   |||||| |||    
T  17543870 cattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagca 17543771  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||| || |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17543770 aaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatataccatttataacatat 17543692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 21354787 - 21354917
Alignment:
Q  93 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 192  Q
    |||||||| ||||||||||||| |||||||| ||||||| | ||||||| |||||||||||| |||| |||||||||||| |||||||||||||| ||||    
T  21354787 actttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaaaatccatcgttttttattgcgattttacgatttcttataaactaagt 21354886  T
Q  193 catttatgactatataccatttataacatat 223  Q
     ||||||||||||||||||||||||||||||    
T  21354887 aatttatgactatataccatttataacatat 21354917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 7918506 - 7918338
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||||||||||  |||||||| | ||||| |||||||||||||||| |||||||||||| ||| | || ||| ||||||||    
T  7918506 ttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaaaatc 7918407  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataa 218  Q
     |||||||||||||| ||||||  ||||| |||||||  |||||||||||||||||||| |||||||||    
T  7918406 aatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcatttataa 7918338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 189
Target Start/End: Complemental strand, 27233391 - 27233263
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||| |||||||| ||||||||   |||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||    
T  27233391 ccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttg 27233292  T
Q  161 attgcgattttaagatttcttataaacca 189  Q
    |||||||||||| ||||||||||| ||||    
T  27233291 attgcgattttatgatttcttatatacca 27233263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 22498967 - 22498843
Alignment:
Q  93 actttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagt 192  Q
    |||||||||||||| |||||||||||||||||||| |||   ||||||| ||||||||||||||||| ||||| |||||| |||||||||||||| ||||    
T  22498967 actttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatcgattttaattgcaattttacgatttcttataaacgaagt 22498868  T
Q  193 catttatgactatataccatttata 217  Q
    |||||||||||||||||||| ||||    
T  22498867 catttatgactatataccatctata 22498843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 19748331 - 19748510
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    ||||| || ||||||||| |||||||||  || |||| ||||||||   | |||||||||||| || ||||||||||| |||||||||   |||||||||    
T  19748331 ccattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggc 19748430  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||| ||||||||| ||||    
T  19748431 aaaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatcatttataaaatat 19748510  T

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Target: chr6; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 51 - 205
Target Start/End: Complemental strand, 2912372 - 2912218
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||  |||||| ||||||||| ||||||||| || ||||||||| ||||||| ||||||||||   |||||| |||||||     
T  2912372 ttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaatc-atagtagaatcttaaaataagcaaaatt 2912274  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactat 205  Q
    |||||||||||||||| |||||| ||||| |||||||| |||||||||||||||||    
T  2912273 catcgattttgattgcaattttacgattttttataaacaaagtcatttatgactat 2912218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 17103254 - 17103372
Alignment:
Q  105 ttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgacta 204  Q
    ||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||| ||||| |||||    
T  17103254 ttcaacgactcaaatgcatagtagaatcccaaaatagacaaaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgacta 17103353  T
Q  205 tataccatttataacatat 223  Q
    |||| ||||||| ||||||    
T  17103354 tatatcatttatgacatat 17103372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 11327701 - 11327525
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||  |||||||| | | |||| |   |||||||| |||||| |||| |||||||||||||||| | ||||||||||    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacat 221  Q
    |||| |||||||||| |||||||||||| | |||||||| ||| || |||||||||||| |||||||||||| ||||    
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccatttatcacat 11327525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 6943590 - 6943464
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| |||||||  |||||||| | |||||||||||||||||||||||||||| ||||||||||   ||||||| ||    
T  6943590 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagaca 6943491  T
Q  145 aaatccatcgattttgattgcgatttt 171  Q
    |||| ||||||||||||||||||||||    
T  6943490 aaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 10509154 - 10508989
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    |||||||||||||||||| ||||||||| |||||||  || | |||   ||||||||||| ||||| |||||||||  |||||||||| | |||||||||    
T  10509154 ccattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggc 10509055  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatatacc 210  Q
    ||||| |||||||||||||| |||||||| || || |||||||| ||||||||||| ||||||||||    
T  10509054 aaaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacc 10508989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 400
Target Start/End: Original strand, 23898067 - 23898165
Alignment:
Q  302 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||| ||| |||||| | |||||||||| ||||    
T  23898067 tagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacctgaagcaaaatcccgattttgacaatcttg 23898165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 23506092 - 23506193
Alignment:
Q  295 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 394  Q
    |||||| ||||||| |||||||||| ||||||  |||||||||||| ||| ||||||||||| |||||||||||| |||||||||||| | |||| ||||    
T  23506092 acaaaaatagttgactaaaatccttcgattttaattgtgattttacaattttcgattttgctattctctttcgacttaaagtaaaatccccatttcgaca 23506191  T
Q  395 ac 396  Q
    ||    
T  23506192 ac 23506193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 30912286 - 30912181
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgac 393  Q
    ||||||| ||||||| ||||||||||  |||||||||| |||||||||||| ||||||||||| ||||||||| |||| ||| |||||  | ||||||||    
T  30912286 tacaaaagtagttgaataaaatccttcaattttggttgagattttacgattatcgattttgctattctctttcaacctgaagcaaaattccgattttgac 30912187  T
Q  394 aacctt 399  Q
    ||||||    
T  30912186 aacctt 30912181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 2912144 - 2912046
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 389  Q
    |||||||||| ||||||||||||||||||  |||| | || ||||||||||||| ||||||| ||||||||||||| |||| ||| |||||| ||||||    
T  2912144 ttctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacgattatcgatttcgctcttctctttcaacctgaagcaaaatcccaattt 2912046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 7223761 - 7223870
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| |||  ||||||||| |  |||||||||| ||| |||||||||| ||||||| || | |||||    
T  7223761 ttctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctattccctttcgacctgaagtaaagtcccgatttt 7223860  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  7223861 gacaaccttg 7223870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 18491161 - 18491081
Alignment:
Q  52 tgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 131  Q
    ||||||||||| ||||||||| |||||||| || ||||| || |||| ||||||||||||||||||||||||||| |||||    
T  18491161 tgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaat 18491081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 3574047 - 3573984
Alignment:
Q  60 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccat 123  Q
    ||||||||||||||||||||| || ||||  | |||||||||||||||||||||||||||||||    
T  3574047 tccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 27614525 - 27614434
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 396  Q
    ||||||||||||||| ||||||| |||||||||||||| |  ||||||| || ||| |||||||||| ||||||| ||  ||||||||||||    
T  27614525 ttgagtaaaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcgacctgaagtaaattcctaattttgacaac 27614434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 4841712 - 4841659
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 344  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  4841712 ttctacaaaagtagttgagtaaaatcctttgattttgattgtgatttttcgatt 4841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 5422879 - 5422798
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 125  Q
    ||||| |||||||||||| ||||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||| ||||    
T  5422879 ccattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 11327445 - 11327336
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||| ||| ||||||| ||| |||||||||| | ||||||||||| ||| ||||| |||| |||||||  | | |||||    
T  11327445 ttctacaaaagtccttgagtaaaattcttcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaagccccgatttt 11327346  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  11327345 gacaaccttg 11327336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 19748579 - 19748688
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  |||||||||| ||| ||||| |||| || |||| || | |||||    
T  19748579 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctattccctttcaacctgaattaaagtcccgatttt 19748678  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  19748679 gacaaccttg 19748688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 22498323 - 22498214
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||||||||||| ||  |||||| ||| |||||||||| |  | |||||||| ||| |||||||||| ||||||| || |||||||    
T  22498323 ttctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacgagtcccaattttgctattccctttcgacctgaagtaaagtcccaatttt 22498224  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  22498223 gacaaccttg 22498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 375
Target Start/End: Original strand, 31407561 - 31407639
Alignment:
Q  297 aaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaag 375  Q
    |||| ||||||||||||||| |||||||||| |||||||||||  ||| ||||||||| | ||| ||||| ||||||||    
T  31407561 aaaagtagttgagtaaaatcttttgattttgattgtgattttataattttcgattttgttattccctttcaacctaaag 31407639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 17543613 - 17543504
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||  ||||||| || |  |||||||||| |||  ||||||||| ||||||| || |||||||    
T  17543613 ttctacaaaagtccttgagtaaaatccttcgattttgatttcgattttatgagtcccgattttgctattccttttcgacctgaagtaaagtcccaatttt 17543514  T
Q  391 gacaaccttg 400  Q
     |||||||||    
T  17543513 aacaaccttg 17543504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 10508881 - 10508829
Alignment:
Q  324 tttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagt 376  Q
    |||||||| |||||||||||||||||||||||||||| ||||| | |||||||    
T  10508881 tttggttgcgattttacgattgtcgattttgctcttcgctttctatctaaagt 10508829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 18491064 - 18491005
Alignment:
Q  72 tctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 131  Q
    ||||||||| || ||||| ||||||| ||||||||||| ||||||||||||||| |||||    
T  18491064 tctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaat 18491005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 31108418 - 31108489
Alignment:
Q  308 agtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 379  Q
    ||||||||| |||||||||| ||| | |||||||| | ||||||||||| ||| |||||||||| |||||||    
T  31108418 agtaaaatcttttgattttgattgcggttttacgaatctcgattttgctattccctttcgacctgaagtaaa 31108489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 27614651 - 27614594
Alignment:
Q  168 ttttaagatttcttataaacca--agtcatttatgactatataccatttataacatat 223  Q
    ||||| |||||||||||||| |  | ||||||||||||||||||||||||||||||||    
T  27614651 ttttacgatttcttataaactataattcatttatgactatataccatttataacatat 27614594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 3573783 - 3573674
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctc-tttcgacctaaagtaaaatctcaattt 389  Q
    |||||||| | |||||||||||| ||||  ||||||| ||| |||||||||| |   ||||||||| ||| | ||||||||| ||||||| || | ||||    
T  3573783 ttctacaagagtagttgagtaaattcctacgattttgattgcgattttacgagtcctgattttgctattcccttttcgacctgaagtaaagtcccgattt 3573684  T
Q  390 tgacaacctt 399  Q
    ||||||||||    
T  3573683 tgacaacctt 3573674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 4842011 - 4841946
Alignment:
Q  83 ggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaat 148  Q
    ||||||| | ||||| ||||||||||||||||||||||| ||| ||||| | | ||||||||||||    
T  4842011 ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataataggcaaaat 4841946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 20432476 - 20432411
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 356  Q
    |||||||||| ||||| |||||||| |||  |||||| ||| |||||||||||| |||||||||||    
T  20432476 ttctacaaaactagttaagtaaaattcttcaattttgattgcgattttacgattttcgattttgct 20432411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 400
Target Start/End: Complemental strand, 7918240 - 7918124
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| |||||||||| |  ||||||||||| ||| ||||||| |||  ||||||||| |   |||| |||| ||| |||||||||| |||||||  |     
T  7918240 atattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctattccctttcgacctgaagtaaagccc 7918141  T
Q  384 caattttgacaaccttg 400  Q
    | |||||||||||||||    
T  7918140 cgattttgacaaccttg 7918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 15527993 - 15527905
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 379  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||| ||| |  |||||||||| ||  |||||||||| |||||||    
T  15527993 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagttccgattttgctatttcctttcgacctgaagtaaa 15527905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 4841757 - 4841718
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttat 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  4841757 aaaatacatcgattttgattgcgattttacgatttcttat 4841718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 7918343 - 7918301
Alignment:
Q  180 ttataaaccaagtcatttatgactatataccatttataacata 222  Q
    |||||||  |||||||||||||||||||| |||||||||||||    
T  7918343 ttataaattaagtcatttatgactatatatcatttataacata 7918301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 400
Target Start/End: Original strand, 21354928 - 21355030
Alignment:
Q  298 aaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacc 397  Q
    |||||| ||| || |||||| | ||||||| ||| |||||||||| |   |||||| || ||| ||||| || | |||||||||| ||||||||||||||    
T  21354928 aaattatttgggtgaaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttgaagtaaaatcccaattttgacaacc 21355027  T
Q  398 ttg 400  Q
    |||    
T  21355028 ttg 21355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 2912189 - 2912148
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataa 185  Q
    ||||||| |||||||||||||||||||||  |||||||||||    
T  2912189 aaaatccgtcgattttgattgcgattttacaatttcttataa 2912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 17103391 - 17103424
Alignment:
Q  139 taggcaaaatccatcgattttgattgcgatttta 172  Q
    |||| |||||||||||||||||||||||||||||    
T  17103391 taggtaaaatccatcgattttgattgcgatttta 17103424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 17103441 - 17103550
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| | | ||| ||| |||||||||| |   ||||||| | ||| |||||||| | ||||||| || | |||||    
T  17103441 ttctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacgagtcctgattttgttattccctttcgacttgaagtaaagtcccgatttt 17103540  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  17103541 gacaaccttg 17103550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 18490988 - 18490935
Alignment:
Q  72 tctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 125  Q
    ||||||||| || ||||| ||||||| |||||||||||||||| ||| ||||||    
T  18490988 tctaaaatccagcattttgcaactttattcaccttcaacgactgaaacccatag 18490935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 26053179 - 26053074
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  | |||||||| ||  |||||||||| ||||||| ||   |||||    
T  26053179 ttctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaagtcctgatttt 26053080  T
Q  391 gacaac 396  Q
    ||||||    
T  26053079 gacaac 26053074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 26073232 - 26073127
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||||||||||| || ||||||| ||| |||||||||| |  | |||||||| ||  |||||||||| ||||||| ||   |||||    
T  26073232 ttctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaagtcctgatttt 26073133  T
Q  391 gacaac 396  Q
    ||||||    
T  26073132 gacaac 26073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 7918278 - 7918250
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  7918278 aaaatccatcgattttgattgcgatttta 7918250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 10508945 - 10508905
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  10508945 aaaatccatcaattttgattgcgattttacaatttcttata 10508905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 17543658 - 17543630
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  17543658 aaaatccatcgattttgattgcgatttta 17543630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 19748534 - 19748562
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  19748534 aaaatccatcgattttgattgcgatttta 19748562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 22498368 - 22498340
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  22498368 aaaatccatcgattttgattgcgatttta 22498340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 23898012 - 23898052
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  23898012 aaaatccatcgattttgattgagattttacaatttcttata 23898052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 26053224 - 26053196
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  26053224 aaaatccatcgattttgattgcgatttta 26053196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 26073277 - 26073249
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  26073277 aaaatccatcgattttgattgcgatttta 26073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 30912334 - 30912294
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||| ||||||||||| || |||||||||||    
T  30912334 aaaatccatcgattatgattgcgattctatgatttcttata 30912294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 33593089 - 33593057
Alignment:
Q  146 aatccatcgattttgattgcgattttaagattt 178  Q
    ||||||||||||||||||||||||||| |||||    
T  33593089 aatccatcgattttgattgcgattttatgattt 33593057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 21059286 - 21059108
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||| |  ||||||||    
T  21059286 ccattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggc 21059188  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  21059187 aaaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaaccatttataacatat 21059108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 18051660 - 18051485
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| ||||||| ||||||||| | |||||||||| ||||||||||||||||| |||||||||| | ||||||||||    
T  18051660 cattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggca 18051561  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||  |||||||||||||    
T  18051560 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atata--atttataacatat 18051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 19578941 - 19579119
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||| || ||||||||  ||||||| |||||||| | | |||||||||||||||||||| |||||||||||||||| | |||||| |||    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttaccattcataacatat 19579119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 43234872 - 43235045
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| | ||||||| |||||||  |||||||| | |||||||||||||||||||||| |||||||||||||||| | |||||||| ||||||    
T  43234872 ttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaaaatc 43234971  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||||||| ||||||| |||||||||| ||| |||||||||||| ||||| ||||||||||||||||    
T  43234972 catcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaaccatttataacatat 43235045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 18843729 - 18843892
Alignment:
Q  60 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgatttt 159  Q
    |||||||||||| ||| |||  |||||||| | ||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||| ||||||||||    
T  18843729 tccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaaattcatcgatttt 18843828  T
Q  160 gattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||| ||| || |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18843829 gattgcaattatacgatttcttataaactaagtcatttatgattatataccatttataacatat 18843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 23172557 - 23172380
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaa--- 146  Q
    |||||||||||| ||||||||| ||||||| ||||||||| | |||||||||| ||||||||||| |||||||||||||||| | ||||||| ||||       
T  23172557 ttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaaatt 23172458  T
Q  147 -atccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
     ||| |||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  23172457 catcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatataccatttgtaacatat 23172380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 19979648 - 19979776
Alignment:
Q  95 tttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtca 194  Q
    |||||||| |||||||||||||||| ||| ||||||| | |||| | ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtca 19979747  T
Q  195 tttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||||||||||    
T  19979748 tttatgactatataccatttataacatat 19979776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 41688775 - 41688617
Alignment:
Q  64 acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgatt 163  Q
    |||||||| ||||||| | ||||||| ||| |||||||||||||||||||| ||||  |||||| ||| | |||||| ||||||| ||||||||||||||    
T  41688775 acttaaatcctaaaat-tcggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgatt 41688677  T
Q  164 gcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| |||||||||||||| || |||||||| ||||||||||||| |||||||||    
T  41688676 gcgattttacgatttcttataaactaaatcatttataactatataccattcataacatat 41688617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 38158379 - 38158221
Alignment:
Q  51 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||| ||||||||||| ||||||||||||||||| | |||||||| || |||||| ||||||||||| |||||||| | ||||||| |||||||    
T  38158379 ttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaaaatc 38158280  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatata 208  Q
    ||| ||||||| |||  |||||| |||||||||||||| || |||||||||||||||||    
T  38158279 cattgattttggttgttattttacgatttcttataaactaaatcatttatgactatata 38158221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 22645850 - 22645681
Alignment:
Q  45 ccattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc 143  Q
    ||||| |||||||||||| ||||||||| |||||||| || ||||| | |||||||||||||||||||| | |||||||||||| ||| | |||||| |     
T  22645850 ccattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagt 22645751  T
Q  144 aaaatccatcgattttgattgcgattttaagatttcttataaaccaa-gtcatttatgactatataccat 212  Q
    ||| |||||| ||||||||||||||||||  ||||||||||||| || ||||||||||||||||||||||    
T  22645750 aaattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatataccat 22645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 27340300 - 27340142
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    |||||||||||  |||||| || |||||| | |||||||||| ||||||||||||||||| ||||||||||   |||||||||||||| |||||||||||    
T  27340300 ccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatcgattttg 27340201  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| |||||||| ||||||||||||| ||||||||    |||||||||||||| ||||||||    
T  27340200 attgagattttaatatttcttataaactaagtcatt----actatataccatttgtaacatat 27340142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 20923722 - 20923843
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| |||||||| || ||||| | |||||||||||||||||||||  |||||||||||||||| | |||||||||||| ||    
T  20923722 ttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaaagtc 20923821  T
Q  150 catcgattttgattgcgatttt 171  Q
    ||||||||||||||||||||||    
T  20923822 catcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 20320992 - 20321119
Alignment:
Q  95 tttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtca 194  Q
    ||||||||||||||| |||| |||||||||||| ||| | |||||||  ||||| |||| | |||||||||||||||| || ||||||||||| ||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga-ttcttataaactaagtca 20321090  T
Q  195 tttatgactatataccatttataacatat 223  Q
    |||||||| ||||| ||||||||||||||    
T  20321091 tttatgaccatatatcatttataacatat 20321119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 24648248 - 24648368
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| |||||||||| |||||||||||||||||||||||||| ||  |||||||||||| |||||||| |||||| |||||||||||||  ||||  |    
T  24648248 atattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttcgattttactcttccctttcgacctaaaaaaaaaaat 24648347  T
Q  384 ca--attttgacaaccttgtt 402  Q
    ||  |||||||||||||||||    
T  24648348 catgattttgacaaccttgtt 24648368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 41688549 - 41688441
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  || |||||||||||| ||||||||||| ||||||| || |  |||||||||| ||| |||||| ||||||||||| || | |||||    
T  41688549 ttctacaaaagtccttaagtaaaatccttcgattttggttgcgattttaggagtcccgattttgctattccctttcgtcctaaagtaaagtcccgatttt 41688450  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  41688449 gacaacctt 41688441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 19377849 - 19377937
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaa 379  Q
    |||||||||| |  ||||||||||||||| ||||||| |||| | ||||||||| ||||||||||| ||| ||||| || |||||||||    
T  19377849 ttctacaaaagtccttgagtaaaatccttcgattttgattgtaaatttacgattctcgattttgctattccctttccacttaaagtaaa 19377937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 19979858 - 19979922
Alignment:
Q  335 ttttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 399  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||| | |||||||| |||||    
T  19979858 ttttacgattgtcgattttgctcttctcttttgacctgaagcaaaatcccgattttgaccacctt 19979922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 19042514 - 19042444
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatc 120  Q
    |||||||||||| | ||||||||||||||| || ||||||   ||||||||||||||||||||||||||||    
T  19042514 ttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 401
Target Start/End: Original strand, 41427681 - 41427775
Alignment:
Q  307 gagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgt 401  Q
    ||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  || ||||||||   ||||||| |||| ||||||||||||||||    
T  41427681 gagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgactcgaagtaaagtctcgattttgacaaccttgt 41427775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 399
Target Start/End: Complemental strand, 27340055 - 27339962
Alignment:
Q  306 tgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaacctt 399  Q
    |||||||||||||| ||||||| ||| ||||| |||||| ||||||||||| ||| ||||| || | ||||||| |  | ||||||||||||||    
T  27340055 tgagtaaaatccttcgattttgattgcgatttcacgattttcgattttgctattccctttcaacttgaagtaaagttccgattttgacaacctt 27339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 43005742 - 43005634
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    ||||||||||  |||||||||||||| ||  |||||| ||| |||||||| ||| |||| ||| || ||  ||||||| |||||| |||||| | |||||    
T  43005742 ttctacaaaagaagttgagtaaaatctttcaattttgattgcgattttacaattttcgaattttctatttcctttcgatctaaagcaaaatcccgatttt 43005643  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  43005642 gacaacctt 43005634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 18843961 - 18844068
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||| ||  ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||| ||||||| |  | |||||    
T  18843961 ttctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtcccgattttgctattccctttcgacctgaagtaaagttccgatttt 18844060  T
Q  391 gacaacct 398  Q
    ||||||||    
T  18844061 gacaacct 18844068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 400
Target Start/End: Complemental strand, 18051397 - 18051307
Alignment:
Q  310 taaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    |||||| ||||||||||| ||| |||| ||| | |  ||||||| || ||| ||||||||||||||||||||| | |||||||| ||||||    
T  18051397 taaaattctttgattttgattgcgattctacaagtcccgatttttctattccctttcgacctaaagtaaaatcccgattttgactaccttg 18051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 19042448 - 19042406
Alignment:
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaac 187  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaac 19042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 21059040 - 21058978
Alignment:
Q  291 ttctacaaaattagttgagtaaaatccttt-gattttggttgtgattttacgattgtcgattt 352  Q
    |||||||||| ||||| |||||||  |||| ||||||||||| ||||||||||||||||||||    
T  21059040 ttctacaaaagtagttaagtaaaaatctttcgattttggttgcgattttacgattgtcgattt 21058978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 38158147 - 38158101
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattt 337  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||    
T  38158147 ttctacaaaaatagttgagtaaaatccttcgattttggttgcgattt 38158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 17624851 - 17624900
Alignment:
Q  295 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt 344  Q
    |||||| ||||||||||||||| |||||||||| ||| ||||||||||||    
T  17624851 acaaaagtagttgagtaaaatcttttgattttgattgcgattttacgatt 17624900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 24106641 - 24106714
Alignment:
Q  47 attattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaat 119  Q
    |||||||||||||||| || ||||||  ||||||  |||||||| ||||||||||||||  |||||||||||||    
T  24106641 attattgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 43235114 - 43235223
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| || |   ||||||||| ||| |||||| |   ||||||| || |||||||    
T  43235114 ttctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtactgattttgctattccctttcgtctcgaagtaaagtcccaatttt 43235213  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  43235214 gacaaccttg 43235223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 15051980 - 15051872
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||  ||  ||||||| | ||||||| || | |||||    
T  15051980 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccttttcgacttgaagtaaagtcccgatttt 15051881  T
Q  391 gacaacctt 399  Q
    || ||||||    
T  15051880 gataacctt 15051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 21059085 - 21059045
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  21059085 aaaatccatcgattttgattgcgattttataatttcttata 21059045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 27340115 - 27340075
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  27340115 aaaatctatcgattttgattgcgattttaatatttcttata 27340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 30804216 - 30804279
Alignment:
Q  333 gattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 396  Q
    ||||||| |||| | ||||||| | ||||||||||||||  || ||||||||||||||||||||    
T  30804216 gattttatgattttggattttgttattctctttcgacctgtagcaaaatctcaattttgacaac 30804279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 20320928 - 20320990
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacga 112  Q
    |||||||||||| | | ||||| ||||||| || |||||| ||||||||||||||||||||||    
T  20320928 ttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 15905021 - 15904976
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgatttta 339  Q
    |||||||||| |||||| |||||||||||| ||| |||||||||||    
T  15905021 tacaaaattaattgagtgaaatcctttgatcttgattgtgatttta 15904976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 26021464 - 26021497
Alignment:
Q  190 agtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||| |||||||||||||    
T  26021464 agtcatttatgactatatacaatttataacatat 26021497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 18843916 - 18843944
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  18843916 aaaatccatcgattttgattgcgatttta 18843944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 19579144 - 19579172
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  19579144 aaaatccatcgattttgattgcgatttta 19579172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 20321144 - 20321172
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  20321144 aaaatccatcgattttgattgcgatttta 20321172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 20321189 - 20321297
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  || ||||||||||||  |||||| ||| ||||||| || |  ||||||| || |||  ||| ||||| ||||||| || |||||||    
T  20321189 ttctacaaaagtccttcagtaaaatccttcaattttgattgcgattttatgagtcccgattttactattcctttttgacctgaagtaaagtcccaatttt 20321288  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  20321289 gacaacctt 20321297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 29270310 - 29270374
Alignment:
Q  332 tgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 396  Q
    ||||||||| ||| ||||||||| | |||||||| ||||| || ||||||| | |||||||||||    
T  29270310 tgattttactattttcgattttgatattctcttttgacctgaaataaaatcccgattttgacaac 29270374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 7e-56; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 5362093 - 5361915
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| |||||||  |||||||| | |||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttttaacatat 5361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 9770128 - 9770289
Alignment:
Q  62 cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttga 161  Q
    ||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||| |||||||    
T  9770128 cgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaaaatctatcaattttga 9770227  T
Q  162 ttgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||||| |||||||||||||| |||| | |||||||||||||||||| |||||||||    
T  9770228 ttgcgattttacgatttcttataaactaagttacttatgactatataccattcataacatat 9770289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 8889233 - 8889405
Alignment:
Q  52 tgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 150  Q
    ||||||||||| ||||||||| |||||||| ||||||||   | |||||||||| |||||||||||||| |||| |||||| | |||||||||||||| |    
T  8889233 tgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggcaaaattc 8889332  T
Q  151 atcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  8889333 atcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatataccatttataatatat 8889405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 9911502 - 9911363
Alignment:
Q  84 gattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttat 183  Q
    |||||| ||||||||||||||||||||| |  |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  9911502 gattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggcaaaatccatcgattttgattgcgattttacgatttcttat 9911403  T
Q  184 aaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9911402 aaactaagtcatttatgactatataccatttataacatat 9911363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 13023566 - 13023747
Alignment:
Q  46 cattattgtcaaaatccga-cttaaattctaaaa-tctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatac--aaaaatag 141  Q
    |||| |||||||||||| | ||||||| |||||| | ||||||||| | ||||||||||||||||| ||||||||||||||||||||| |  ||||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  142 gcaaaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
      |||||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatataccatttataacatat 13023747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 36120823 - 36121001
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||| |||| ||||||| |||||| ||||||||| | | |||||||||||||||||||| ||||||||| || ||| | |||||| |||    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatataccatttataaaatat 36121001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 10142914 - 10143076
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    ||||||||||||||||||| ||  ||||| | ||||||| ||||||||| ||||||| ||||||||| ||| | ||||||| ||||||||||||||||||    
T  10142914 ccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagacaaaatccatcgattttg 10143013  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  10143014 attgtgattttacgatttcttataaatcaagtcatttatgactatataccaattataatatat 10143076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 17466083 - 17466256
Alignment:
Q  51 ttgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||| || ||||||||  |||||| ||||||||| | | |||||||| ||| || |||||||||||||| |||||| | |||||| ||||||||    
T  17466083 ttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaaatc 17466182  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    ||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  17466183 catcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatataccatttataacatat 17466256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 5375668 - 5375841
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| | | ||||||||||||| || |||||| | |||||||||||||||||||||| |||| |||| ||||||   ||||||| ||||||     
T  5375668 ttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaatt 5375767  T
Q  150 catcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  5375768 catcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatcatttataacatat 5375841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 13551752 - 13551598
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||||||||||| ||||||| || ||||||| ||||||||| | ||||| |||||||||||||||||||||||||| ||||||   ||||||| ||    
T  13551752 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 13551653  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttat 199  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  13551652 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcatttat 13551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 23065077 - 23064913
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    |||||||||||||||||||| || |||||  |||||||||||| ||||||||||||||||||| ||||||| | ||||||||  |||||||||||||||     
T  23065077 ccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtcaaatccatcgatttta 23064978  T
Q  161 attgcgattttaagatttcttataaac--caagtcatttatgactatataccatttataacatat 223  Q
    ||||| |||||| ||||||||||||||   ||||||||||||||  |||| ||||||||||||||    
T  23064977 attgcaattttacgatttcttataaactataagtcatttatgaccctatatcatttataacatat 23064913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 37240300 - 37240434
Alignment:
Q  88 ttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttgattgcgattttaagatttcttataaac 187  Q
    |||| ||||| ||||||||||||||||||||||||||||||||  ||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||     
T  37240300 ttacgacttttttcaccttcaacgactcaaatccatagtagaacccaaaa-taggcataattcatcgattttgattgcgattttacgatttcttataaat 37240398  T
Q  188 caagtcatttatgactatataccatttataacatat 223  Q
     ||||||||||||||| ||||||||||||| |||||    
T  37240399 taagtcatttatgactctataccatttatatcatat 37240434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 6346838 - 6346729
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||| ||| |  | |||||    
T  6346838 ttctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattttcgattttgctcttccctttcgacctgaagcaaatttccgatttt 6346739  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  6346738 gacaaccttg 6346729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 51 - 171
Target Start/End: Complemental strand, 8011341 - 8011220
Alignment:
Q  51 ttgtcaaaatccga-cttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| | || |||| |||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||  |||||||     
T  8011341 ttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaaaatt 8011242  T
Q  150 catcgattttgattgcgatttt 171  Q
    ||||||||||||||||||||||    
T  8011241 catcgattttgattgcgatttt 8011220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 18459514 - 18459404
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||||||||| ||| |||||||| ||||||  ||| |||||||||||||||||||||||||||  ||||| |||| ||| |||||||| |||||    
T  18459514 ttctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgattgtcgattttgctctttcctttcaacctgaagcaaaatctcgatttt 18459415  T
Q  391 gacaaccttgt 401  Q
    |||||||||||    
T  18459414 gacaaccttgt 18459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 8889463 - 8889571
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||||||||| |||||| ||||||||||| |||||||| |||||| ||||||||| ||||||||||||| ||| |||||| | |||||    
T  8889463 ttctacaaaagtagttgagtaagatccttcgattttggttgcgattttacaattgtcaattttgctc-tctctttcgacctgaagcaaaatcccgatttt 8889561  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  8889562 gacaaccttg 8889571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 37240485 - 37240593
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaa-tctcaattt 389  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||| ||| ||| |||| ||| |||||    
T  37240485 ttctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttagctcttctctttcgtcctgaagcaaaactct-aattt 37240583  T
Q  390 tgacaacctt 399  Q
    ||||||||||    
T  37240584 tgacaacctt 37240593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 291 - 384
Target Start/End: Complemental strand, 5361848 - 5361755
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctc 384  Q
    |||||||||| ||||||||||||| |||| ||||||| |||  |||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  5361848 ttctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacgattgtctattttgctcttctctttcgacctgaaataaaatctc 5361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 7044731 - 7044831
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| ||||||||| |||||||| | |||||| ||||||| ||||||||||||||||||||||||||| ||||| | |||||| ||||||||    
T  7044731 ttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaataagcaaaatc 7044830  T
Q  150 c 150  Q
    |    
T  7044831 c 7044831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 402
Target Start/End: Original strand, 7045202 - 7045301
Alignment:
Q  303 agttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttgtt 402  Q
    ||||||||||||||||| ||||||| ||| ||||||| |||| | ||||||||||||| |||||||||| |||||||||  | |||||||||||||||||    
T  7045202 agttgagtaaaatccttcgattttgattgcgattttatgatttttgattttgctcttccctttcgacctgaagtaaaattcctattttgacaaccttgtt 7045301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 5943142 - 5943044
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 389  Q
    |||||||||| ||||||||||||||||||  |||||  ||| |||||||||||| | ||||||||||||| ||||||||||||| ||||||||| ||||    
T  5943142 ttctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgatttttgattttgctcttccctttcgacctaaaataaaatctcgattt 5943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 400
Target Start/End: Original strand, 7452745 - 7452860
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatct 383  Q
    |||||| |||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||| || | ||| |||||| |||||||||| ||| ||||||     
T  7452745 atattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacgattttcaacttttctcttccctttcgacctgaagcaaaatcc 7452843  T
Q  384 caattttgacaaccttg 400  Q
     ||||||||||||||||    
T  7452844 taattttgacaaccttg 7452860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 9770372 - 9770467
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||||||| ||||||| ||| |||||||||| |  |||||||||| ||| |||||||||||||||||| || | |||||||||||||||    
T  9770372 ttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgacctaaagtaaagtcccgattttgacaaccttg 9770467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 6347194 - 6347114
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatag 125  Q
    ||||||||||||||| || |||||||| |||||||| |||||||| ||||||| || ||||||||||||||||||||||||    
T  6347194 cattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatag 6347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 7452435 - 7452523
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 150  Q
    |||||||||||||||||||| || ||||| ||||||| ||||||||||||||||| |||||||||| || | | || |||||||||||||    
T  7452435 ccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagtggattcctaatataggcaaaatcc 7452523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 10394856 - 10394965
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||| | ||||||||||||   |||| || | ||| |||||  |||||||    
T  10394856 ttctacaaaagtagttgagtaaagtccttcgattttgattgcgattttacgatttttgattttgctctttcttttcaacttgaagcaaaattccaatttt 10394955  T
Q  391 gacaaccttg 400  Q
    ||||||||||    
T  10394956 gacaaccttg 10394965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 4156767 - 4156866
Alignment:
Q  51 ttgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatc 149  Q
    |||||||||||| |||||||||  |||||| ||||||||||  ||||| |||||||| |||||||||||||  ||||||||| | |||||| ||||||||    
T  4156767 ttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaaaatc 4156866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 4157273 - 4157377
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttac---gattgtcgattttgctcttctctttcgacctaaagtaaaatctcaat 387  Q
    |||||||||| ||||||||||||||| || ||| ||| ||| ||||||||   |||| ||||||||||||||| |||||||| ||||| |||||| | ||    
T  4157273 ttctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcccgat 4157372  T
Q  388 tttga 392  Q
    |||||    
T  4157373 tttga 4157377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 4157560 - 4157664
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttac---gattgtcgattttgctcttctctttcgacctaaagtaaaatctcaat 387  Q
    |||||||||| ||||||||||||||| || ||| ||| ||| ||||||||   |||| ||||||||||||||| |||||||| ||||| |||||| | ||    
T  4157560 ttctacaaaagtagttgagtaaaatctttcgatcttgattgcgattttacaatgattttcgattttgctcttccctttcgacttaaagcaaaatcccgat 4157659  T
Q  388 tttga 392  Q
    |||||    
T  4157660 tttga 4157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 397
Target Start/End: Original strand, 10143146 - 10143250
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||||  ||||||||  ||||||| ||  | ||| ||||||||||||||    
T  10143146 ttctacaaaattagttgaataaaatccttcgattttgattgcgattttacgattgttaattttgct-atctcttttgatttgaag-aaaatctcaatttt 10143243  T
Q  391 gacaacc 397  Q
    || ||||    
T  10143244 gataacc 10143250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 24719516 - 24719602
Alignment:
Q  46 cattattgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaat 131  Q
    |||| ||||||||||| |||||||| |||||||||  | |||||| | ||||| ||||||||||||||||||||||||||| |||||    
T  24719516 cattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaat 24719602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 18459822 - 18459733
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatcc 150  Q
    |||||| |||| |||||||| | |||||| | ||| | ||||| ||||||||||||||||||||| ||||| | ||||||||||||||||    
T  18459822 ccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggcaaaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 399
Target Start/End: Original strand, 17466329 - 17466433
Alignment:
Q  295 acaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgaca 394  Q
    |||||| |||||||||| |||| ||  |||||| |||  ||||||||||||||||||||||||  |||||||||| | ||| |||||  || ||||||||    
T  17466329 acaaaagtagttgagtataatctttcaattttgtttgcaattttacgattgtcgattttgctcagctctttcgacttgaagcaaaatgccagttttgaca 17466428  T
Q  395 acctt 399  Q
    |||||    
T  17466429 acctt 17466433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 24719869 - 24719923
Alignment:
Q  346 tcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||||||||||||||    
T  24719869 tcgattttgctcttccctttcgacctgaagcaaaatctcgattttgacaaccttg 24719923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 5375925 - 5376020
Alignment:
Q  305 ttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaaccttg 400  Q
    ||||||||||||||| ||||||| ||| |||||||||| |  ||||||| || ||   ||| ||||| ||||||| || |||||||||||||||||    
T  5375925 ttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttactatttatttttgacctgaagtaaagtcccaattttgacaaccttg 5376020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 9149605 - 9149502
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||| ||| ||||||||||||||||||  |||||| |||  ||||||| ||| | ||||| ||||||  |||||||||||||| ||||| |  |||||    
T  9149605 ttctacgaaagtagttgagtaaaatccttcaattttgattggaattttacaattttagatttcgctctttcctttcgacctaaagcaaaatattgatttt 9149506  T
Q  391 gaca 394  Q
    ||||    
T  9149505 gaca 9149502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 7815559 - 7815661
Alignment:
Q  49 tattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaa 147  Q
    |||||| ||||||| ||||||||| |||||||  || |||||   ||||| |||| ||| | ||||||||| |||||||||||| | |||||||||||||    
T  7815559 tattgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaa 7815658  T
Q  148 tcc 150  Q
    |||    
T  7815659 tcc 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttctt 181  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 8011019 - 8010954
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgct 356  Q
    ||||| |||| |||||||||||||||||| ||||||| ||| |||||||||| |  ||||||||||    
T  8011019 ttctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgct 8010954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 11321022 - 11320974
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgatttta 339  Q
    |||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  11321022 ttcttcaaaatcaattgagtaaaatccttttattttggttgtgatttta 11320974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 13023807 - 13023903
Alignment:
Q  294 tacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||  ||| |||||||| ||  || ||| |||||||||||||| |  |||||||||| |||||||||||| | ||||||| || |||||||    
T  13023807 tacaaaattccttgggtaaaatcattctatcttgattgtgattttacgagttccgattttgctattctctttcgacttgaagtaaagtcccaatttt 13023903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 46664228 - 46664152
Alignment:
Q  320 tgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaattttgacaac 396  Q
    |||||||| ||| |||||| ||||| ||||||||||| ||   ||||||||| ||| |||||| |||||||||||||    
T  46664228 tgattttgattgcgattttccgattttcgattttgctatttcttttcgacctgaagcaaaatcccaattttgacaac 46664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 6346882 - 6346843
Alignment:
Q  145 aaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttata 6346843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 23064844 - 23064737
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  |||| ||||||||||  |||||| ||| |||||||||| |  |||||| | | ||| |||||||||| ||||||| || | |||||    
T  23064844 ttctacaaaagtccttgaataaaatccttcaattttgattgcgattttacgagttccgatttcgttattccctttcgacctgaagtaaagtcccgatttt 23064745  T
Q  391 gacaacct 398  Q
    ||||||||    
T  23064744 gacaacct 23064737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 24719782 - 24719816
Alignment:
Q  150 catcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||||| |||||||||||    
T  24719782 catcgattttgattgcgattttacgatttcttata 24719816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 5884170 - 5884129
Alignment:
Q  284 atattggttctacaaaattagttgagtaaaatcctttgattt 325  Q
    |||||| |||||||||| |||||||||||||||||| |||||    
T  5884170 atattgattctacaaaaatagttgagtaaaatccttcgattt 5884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 55476234 - 55476343
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| |||||||||| |  |||||||  |  || |||||||| | ||||||| || | |||||    
T  55476234 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtaccgattttattactccctttcgacttgaagtaaagtcccgatttt 55476333  T
Q  391 gacaaccttg 400  Q
    || |||||||    
T  55476334 gataaccttg 55476343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 7044964 - 7045004
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  7044964 aaaatccatcgattttgattgatattttacgatttcttata 7045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 8011064 - 8011024
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||| |||||||||||||||||||||||  ||||||||||    
T  8011064 aaaatacatcgattttgattgcgattttacaatttcttata 8011024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 9911335 - 9911299
Alignment:
Q  148 tccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||||||  ||||||||||    
T  9911335 tccatcgattttgattgcgattttacaatttcttata 9911299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 17466280 - 17466320
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    |||||||||||||||||||||| ||||||  ||||||||||    
T  17466280 aaaatccatcgattttgattgcaattttacaatttcttata 17466320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 36121024 - 36121052
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  36121024 aaaatccatcgattttgattgcgatttta 36121052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 103; Significance: 4e-51; HSPs: 3)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 8442 - 8620
Alignment:
Q  46 cattattgtcaaaatccg-acttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| ||||||||||||  |||||||| |||||||| | |||||| | |||||||||||||||||||||| ||||| || ||||||| | |||||| |||    
T  8442 cattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataagca 8541  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  8542 aaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatataccatttataccatat 8620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 8687 - 8796
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||| ||| || |||||||||||||||  |||||| ||| |||||||||| |  |||||||| | ||| |||||||||| ||||||| || | |||||    
T  8687 ttctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacgagttccgattttgttattccctttcgacctgaagtaaagtcccgatttt 8786  T
Q  391 gacaaccttg 400  Q
    || |||||||    
T  8787 gagaaccttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 8642 - 8670
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  8642 aaaatccatcgattttgattgcgatttta 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 7569 - 7407
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggcaaaatccatcgattttg 160  Q
    |||||||||||||||||||  |||||||| | |||||||| |||||||||||   |||||||||||||||| | |||||||||||||| ||||||||||     
T  7569 ccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggcaaaattcatcgatttta 7470  T
Q  161 attgcgattttaagatttcttataaaccaagtcatttatgactatataccatttataacatat 223  Q
    |||||||||||| |||||||||||||| |||| |||||||| ||||||||| ||| |||||||    
T  7469 attgcgattttacgatttcttataaacgaagtaatttatgaatatataccaattagaacatat 7407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 93834 - 93657
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| ||||||||| |||||||| || |||||   | |||||||||| ||||| |||||||||||||| ||||| | |||||||||     
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  145 aaatccatcgattttgattgcgattttaagatttcttataaaccaagtcatttatgact-atataccatttataacatat 223  Q
    |||||||||||||||||||||||||||| |||||||| ||||  ||||| ||||||||| |||||| ||| |||||||||    
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacgattcataacatat 93657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 93588 - 93483
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgatt-gtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 389  Q
    |||||||||| ||||||| |||||||||| ||||||| ||  |||||||| ||| ||||||||||||||| |||||  |||| ||| |||| |  |||||    
T  93588 ttctacaaaagtagttgaataaaatccttcgattttgattacgattttacaatttgtcgattttgctcttttcttttaacctgaagcaaaaccctaattt 93489  T
Q  390 tgacaa 395  Q
    ||||||    
T  93488 tgacaa 93483  T

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Target: scaffold0042; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 93633 - 93593
Alignment:
Q  144 aaaatccatcgattttgattgcgattttaagatttcttata 184  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  93633 aaaatccatcgattttgattgcgattttacgatttattata 93593  T

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Target: scaffold0510 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 215 - 91
Alignment:
Q  61 ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggc-aaaatccatcgatttt 159  Q
    ||||||||||| |||||||  |||||||| | ||||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  215 ccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaaatccatcgatttt 116  T
Q  160 gattgcgattttaagatttcttata 184  Q
    ||||| |||||||  ||||||||||    
T  115 gattgagattttacaatttcttata 91  T

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Target: scaffold0510; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 76 - 7
Alignment:
Q  302 tagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacct 371  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  76 tagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacct 7  T

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Target: scaffold0028 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 145834 - 145942
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||  |||||||||||||| ||||||| |||  ||||||||||| |||||||  || || ||||||||||| ||| ||||||||||||||    
T  145834 ttctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattttcgatttaactattttctttcgacctgaagcaaaatctcaatttt 145933  T
Q  391 gacaacctt 399  Q
    |||||||||    
T  145934 gacaacctt 145942  T

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Target: scaffold0016 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 56308 - 56196
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgat-tgtcgattttgctcttctctttcgacctaaagtaaaatctcaattt 389  Q
    |||||||||| |  ||||||||||||||| ||||||| ||| ||||||| ||| | ||||||||||| ||| |||||||||| ||||||| |||| ||||    
T  56308 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgatttta-gatgtctcgattttgctattccctttcgacctgaagtaaagtctcgattt 56210  T
Q  390 tgacaaccttgttc 403  Q
    ||||||||||||||    
T  56209 tgacaaccttgttc 56196  T

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Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 58790 - 58736
Alignment:
Q  167 attttaagatttcttataaaccaagtcatttatgactatataccatttataacat 221  Q
    |||||| |||||||||||||| || |||||||||||||||||||| |||||||||    
T  58790 attttacgatttcttataaactaaatcatttatgactatataccacttataacat 58736  T

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Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 56353 - 56325
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  56353 aaaatccatcgattttgattgcgatttta 56325  T

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Target: scaffold0048 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 48903 - 48839
Alignment:
Q  60 tccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccata 124  Q
    |||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  48903 tccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccata 48839  T

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Target: scaffold0048; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 61197 - 61089
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| ||||| |||||||| ||| ||||||| |||||||||||||||| |  ||||| || |||||||| ||||| ||| |||||| | |||||    
T  61197 ttctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacgattttaaattttacttttctcttttgacctgaagcaaaatcccgatttt 61098  T
Q  391 gacaacctt 399  Q
    | |||||||    
T  61097 ggcaacctt 61089  T

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Target: scaffold0048; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 48545 - 48497
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgatttta 339  Q
    |||||||||| ||||| |||||||||||| ||||||| ||| |||||||    
T  48545 ttctacaaaagtagttaagtaaaatccttcgattttgattgagatttta 48497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 392
Target Start/End: Complemental strand, 8842 - 8741
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatctcaatttt 390  Q
    |||||||||| |||||||||||||||||| ||||||| ||  ||||||| |||| ||||||||||||| |  |||| |||||||| |||||| | |||||    
T  8842 ttctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattttcgattttgctctaccttttcaacctaaagcaaaatcccgatttt 8743  T
Q  391 ga 392  Q
    ||    
T  8742 ga 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 9150 - 9049
Alignment:
Q  46 cattattgtcaaaatcc-gacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||||| || ||||||| |||||| |||||||||   | ||| ||||||||||||||||||||||||||| | ||| |  |||||||||    
T  9150 cattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatagcaaaatccttaaataggca 9051  T
Q  145 aa 146  Q
    ||    
T  9050 aa 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 8887 - 8859
Alignment:
Q  144 aaaatccatcgattttgattgcgatttta 172  Q
    |||||||||||||||||||||||||||||    
T  8887 aaaatccatcgattttgattgcgatttta 8859  T

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Target: scaffold0534 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 915 - 1007
Alignment:
Q  290 gttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttgctcttctctttcgacctaaagtaaaatc 382  Q
    ||||||||||| |||||||||||||| ||| ||||||| |||  ||||||||||| || |||||||||||| |||| ||||| ||| ||||||    
T  915 gttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttttgacctgaagcaaaatc 1007  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  46 cattattgtcaaaat-ccgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaatacaaaaataggca 144  Q
    |||| |||||||||| |||||||||||| ||||||  || ||||| ||| ||| |||||||||||| |||||||||||||| |||||   |||||||| |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  145 aaatcc 150  Q
    ||||||    
T  37196 aaatcc 37191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 35184 - 35102
Alignment:
Q  51 ttgtcaaaatc-cgacttaaattctaaaatctaggattttacaactttcttcaccttcaacgactcaaatccatagtagaata 132  Q
    ||||||||||| ||||||||||||||||||  |  |||||  |||||| |||||||| |||||||||||| ||| ||||||||    
T  35184 ttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaata 35102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 33184 - 33299
Alignment:
Q  291 ttctacaaaattagttgagtaaaatcctttgattttggttgtgattttacgattgtcgattttg-------ctcttctctttcgacctaaagtaaaatct 383  Q
    |||||||||| ||  |||||||||| ||| ||||||| ||| |||||||| ||| ||||||||        || || ||||||||||| ||| |||||||    
T  33184 ttctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttacaattttcgattttcgatttaactattttctttcgacctgaagcaaaatct 33283  T
Q  384 caattttgacaacctt 399  Q
    ||||||||||||||||    
T  33284 caattttgacaacctt 33299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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