View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0486_low_44 (Length: 254)
Name: NF0486_low_44
Description: NF0486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0486_low_44 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 34817664 - 34817584
Alignment:
| Q |
174 |
caaattcaaatttctcataacattttcatcttctccatagtttctagaagaaataaacaatgttctattcacaccagcttc |
254 |
Q |
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| T |
34817664 |
caaattcaaatttctcataacattttcatcttctccatagtttctagaagaaataaacaatgttctattcacaccagcttc |
34817584 |
T |
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