View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0488_high_11 (Length: 251)
Name: NF0488_high_11
Description: NF0488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0488_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 52901571 - 52901359
Alignment:
| Q |
10 |
gaaaagaacttcagcatgatttaaatgcaacataatataatttgagcttttcttaacagtcatactagtagtaatttgatattttgagtatgtatagtgt |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52901571 |
gaaaagaacttcagcatgatttaaatgcaacataatataatttgagcttttcttaacagtcatactagtagtaatttgatattttgagtatgtatagtgt |
52901472 |
T |
|
| Q |
110 |
gtgcatataaaaactatttccaaacacaactctttatgttggtattgaagtgtgaacttatatgatagcaagtgatgaagttgtaaaacaaaccatgttt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52901471 |
gtgcatataaaaactatttccaaacacaactctttatgttggtattgaagtgtgaacttatatgatagcaagtgatgaagttgtaaaacaaaccatgttt |
52901372 |
T |
|
| Q |
210 |
tgatctgacgctt |
222 |
Q |
| |
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||||||||||||| |
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|
| T |
52901371 |
tgatctgacgctt |
52901359 |
T |
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