View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0488_low_7 (Length: 333)
Name: NF0488_low_7
Description: NF0488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0488_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 54 - 325
Target Start/End: Original strand, 38902942 - 38903213
Alignment:
| Q |
54 |
cgaaaccctttcttcaattcagcaattcttttcatacaagcagcttttgatttccccggaacagcagcagcaactttctcccatctcatagcaacatctt |
153 |
Q |
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| T |
38902942 |
cgaaaccctttcttcaattcagcaattcttttcatacaagcagcttttgatttccccggaacagcagcagcaactttctcccatctcatagcaacatctt |
38903041 |
T |
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| Q |
154 |
tcggaaaggctttcaaagcattcaacaaagcaatatcctcatttgaactccaaacactttcaactttctcaaccgtagctaaatctcctccttcttcaac |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38903042 |
tcggaaaggctttcaaagcattcaacaaagcaatatcctcatttgaactccaaacactttcaactttctcaaccgtagctaaatctcctccttcttcaac |
38903141 |
T |
|
| Q |
254 |
aagtctcttatccaacgcttttctcttcttcagaaactgctcatacgaatccgaatcgtcaaccttcatctc |
325 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
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| T |
38903142 |
aagtctcttatccaacgcttttctcttcttcagaaactgctcatacgaatccgaatcatcaaccttcttctc |
38903213 |
T |
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