View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0489_low_10 (Length: 209)
Name: NF0489_low_10
Description: NF0489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0489_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 6959551 - 6959730
Alignment:
| Q |
1 |
atacaagttagttacaataatgaaaaacacatttttctattttcttctcaattcataatagaaccgacactaatcaagtcagcgtatcagtcacgagaat |
100 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
6959551 |
atacaagttagttacaataatgagaaacacatttttctattttcttctcaattcataatagaaccgacactaatcaagtcagcgtatcagtcacgaggat |
6959650 |
T |
|
| Q |
101 |
gaggaaggcagtgaaattcagctttgagaagacaatgtctgttattgttgaagtcttgaacgatttataattatcattcc |
180 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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|
| T |
6959651 |
gaggaaggcagtgaaattcagctttgagaagacaatgtctgtcattgttgaagtcttgaacgatttataattatcattcc |
6959730 |
T |
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