View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493-Insertion-17 (Length: 325)
Name: NF0493-Insertion-17
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493-Insertion-17 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 41547368 - 41547688
Alignment:
| Q |
8 |
gtgatcatggtgaagaattttaaaataaactctttgaacgtagttgagaatagaatattattttttacataattttctttctcctgcaatgcctcaacaa |
107 |
Q |
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| T |
41547368 |
gtgatcatggtgaagaattttaaaataaactctttgaacgtagttgagaatagaatattattttttacataattttctttctcctgcaatgcctcaacaa |
41547467 |
T |
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| Q |
108 |
attgtgttgtataaaggaaaactagatctttttaagagatgacaagaatcacgattcacgaaacaaattttgcatgttacttttgaacatagatgctaaa |
207 |
Q |
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| T |
41547468 |
attgtgttgtataaaggaaaactagatctttttaagagatgacaagaatcacgattcacgaaacaaattttgcatgttacttttgaacatagatgctaaa |
41547567 |
T |
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| Q |
208 |
tattaacgtgtgctatattaaaaatagaatc--tatataatacttattttgaataagacatcc-gaaaaagaaaatcatatatctcgtattttctacaat |
304 |
Q |
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| T |
41547568 |
tattaacgtgtgctatattaaaaatagaatctatatataatacttattttgaataagacatccaaaaaaagaaaatcatatatctcgtattttctacaat |
41547667 |
T |
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| Q |
305 |
ttggatgtatgtgtgtatgtt |
325 |
Q |
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| T |
41547668 |
ttggatgtatgtgtgtatgtt |
41547688 |
T |
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