View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493-Insertion-3 (Length: 621)
Name: NF0493-Insertion-3
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493-Insertion-3 |
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Alignment Details
Target: chr8 (Bit Score: 569; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 8 - 617
Target Start/End: Original strand, 37942070 - 37942675
Alignment:
| Q |
8 |
ctgtagtagtgaagacgatgaagaaataggtaacaagttgttaagatcggctttgtttggttcggatctaactggtttggaccagatagtatcaaggtct |
107 |
Q |
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| T |
37942070 |
ctgtagtagtgaagacgatgaagaaataggtaacaagttgttaagatcggttttgtttggttcggatctaactggtttggaccagatagtatcaaggtct |
37942169 |
T |
|
| Q |
108 |
gtgttgggaagtggcgtagttgtttgtgatggatgaaagtaatttgataaagggtggaacatagtactactaaaaggaccaacatggattgaaggtggtt |
207 |
Q |
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| T |
37942170 |
gtgttgggaagtggcgtagttgtttgtgatggatgaaagtaatttgataaagggtggaacatagcactactaaaaggaccaacatgggttgaaggtggtt |
37942269 |
T |
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| Q |
208 |
gttggttgtttaagaaattaggagagattgatgattgagtgagtgaatcatcgtactcttgcatactcccattcccactgctattaaccaaatccatata |
307 |
Q |
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| T |
37942270 |
gttggttgtttaagaaattaggagagattgatgattgagtgagtgaatcatcgtactcttgcatactcccattcccactgctattaaccaaatccatata |
37942369 |
T |
|
| Q |
308 |
tgagagctattctagtagaaaagggaaacaagtgctgactaagaggttaattattttgctttgcttacacataccaatatttaagaggtatggaagcaaa |
407 |
Q |
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| T |
37942370 |
tgagagctattctagtagaaaagggaaacaagtgctgactaagaggttaattattttgctttgcttacacataccaatatttaagaggtatggaagcaaa |
37942469 |
T |
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| Q |
408 |
gacaagagaaaaacaaaatagctagaaggaaaagatagatagctttgttcagcaaagtaccaccaccacccacgtttttaaggctctgaaatagtgaaat |
507 |
Q |
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| T |
37942470 |
gacaagagaagaacaaaatagctagaaggaaaagatagatagctttgttcagcaaagttccaccaccacccacgtttttaaggctctgaaattgtgaaat |
37942569 |
T |
|
| Q |
508 |
ctgcaagtgcttgcatcacttttacttaacttggttaattgagcaaaagggtattgcgtgaacaaggaagggagtaaataacccacgggtgattttgtac |
607 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
37942570 |
ctgcaagtgcttgcatcacttttacttaacttggttaattgagcaaaagggtattgcgtgaac----aagggagtaaataacccacgggtgattttgtac |
37942665 |
T |
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| Q |
608 |
atatatttca |
617 |
Q |
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|||||||||| |
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| T |
37942666 |
atatatttca |
37942675 |
T |
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