View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0493-Insertion-31 (Length: 110)

Name: NF0493-Insertion-31
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0493-Insertion-31
NF0493-Insertion-31
[»] chr8 (1 HSPs)
chr8 (6-110)||(8933803-8933906)


Alignment Details
Target: chr8 (Bit Score: 72; Significance: 3e-33; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 8933906 - 8933803
Alignment:
Q  6 cactgttgccattttttatactgnnnnnnnncaaatattcctctagaattagatttcaagtttcaacctcacacttgtgaaattattgtgtataactata 105  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8933906 cactgttgccattttttatactgaaaaaaa-caaatattcctctagaattagatttcaagtttcaacctcacacttgtgaaattattatgtataactata 8933808  T
Q  106 aagta 110  Q
    |||||    
T  8933807 aagta 8933803  T

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