View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493_1D_low_24 (Length: 252)
Name: NF0493_1D_low_24
Description: NF0493_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493_1D_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 9408452 - 9408219
Alignment:
| Q |
13 |
gaacaagaatcacagcataataaaaagacggaagctttcacgaagcttctcataagaccatgtgaatgaacttgattaaaagttacttacatcattcact |
112 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
9408452 |
gaacaagaatcacagcataataaaaagatggaagctttcacgaagcttctcataagacaatgtgaatgaacttgattaaaagttacttacatcattcact |
9408353 |
T |
|
| Q |
113 |
acgtaatgctgatgcactaatgaaaattaaatttcggatacgtagtaagtatagaactagaatactataatacgtagaaagtacaaaactacaattatca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9408352 |
acgtaatgctgatgcactaatgaaaattaaatttcggatacgtagtaagtatagaactagaatactataatacgtagaaagtacaaaactacaattatca |
9408253 |
T |
|
| Q |
213 |
tactataataatgagttgcattaaagtgacttgt |
246 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
9408252 |
tactataataatgagttgcattaaagtgacttgt |
9408219 |
T |
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