View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493_2D_low_12 (Length: 324)
Name: NF0493_2D_low_12
Description: NF0493_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493_2D_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 32235994 - 32235766
Alignment:
| Q |
18 |
aattataacacccaaaatctcccaattaattgagatgaatcaatagtaaggtaaggtccccttcatttcctttccttggcaattatatcacttcatgtgt |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32235994 |
aattataacacccaaaatctcccaattaattgagatgaatcaatagtaaggtaaggtccccttcatttcctttccttggcaattatatcacttcatgtgt |
32235895 |
T |
|
| Q |
118 |
ctcttgcttgtttctcattaatacattcacagctaatgtcatcacctcttctccctctttttcataatttttcccatcacttcacttcctatgccctaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32235894 |
ctcttgcttgtttctcattaatacattcacagctaatgtcatcacctcttctccctctttttcataatttttcccatcacttcacttcctatgccctaat |
32235795 |
T |
|
| Q |
218 |
taacctctcttcctctctccattcacaaa |
246 |
Q |
| |
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||||||||||||||||||||||||||||| |
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| T |
32235794 |
taacctctcttcctctctccattcacaaa |
32235766 |
T |
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