View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493_high_63 (Length: 287)
Name: NF0493_high_63
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493_high_63 |
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Alignment Details
Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 68 - 241
Target Start/End: Original strand, 27308914 - 27309091
Alignment:
| Q |
68 |
ctacaacctggacaaacctatgctgaagtgattggtcgtagtgtacagaaattaggagaatgaaataaggtggtccaaaagccagagagaaagaaccctt |
167 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27308914 |
ctacaacctggacaaacctatgctgaagtgattggtcgtaatgtacagaaattaggagaatgaaataaggtggtccaaaagccagagagaaagaaccctt |
27309013 |
T |
|
| Q |
168 |
aaatagcatagcatatatacaaaattggaccctta----catccacacatggaatgtattatatattttttgcctttg |
241 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| |
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| T |
27309014 |
aaatagcatagcatatatacaaaattggacccttacatccatccacacatggaatatattatatattttttgtctttg |
27309091 |
T |
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