View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0493_high_78 (Length: 251)

Name: NF0493_high_78
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0493_high_78
NF0493_high_78
[»] chr1 (26 HSPs)
chr1 (91-251)||(5162033-5162193)
chr1 (7-90)||(43571103-43571186)
chr1 (7-92)||(5489774-5489859)
chr1 (7-93)||(48498979-48499065)
chr1 (7-92)||(44112675-44112760)
chr1 (7-90)||(38335918-38336001)
chr1 (7-90)||(48119628-48119711)
chr1 (7-90)||(35003294-35003377)
chr1 (7-90)||(37814778-37814861)
chr1 (7-88)||(4401329-4401411)
chr1 (14-92)||(24769523-24769601)
chr1 (7-91)||(41065152-41065236)
chr1 (10-90)||(50448280-50448360)
chr1 (8-91)||(750323-750406)
chr1 (7-92)||(45639749-45639834)
chr1 (7-91)||(38113212-38113296)
chr1 (7-91)||(45427762-45427846)
chr1 (9-92)||(26585460-26585543)
chr1 (7-90)||(46168383-46168466)
chr1 (7-88)||(2497579-2497660)
chr1 (7-88)||(7447828-7447908)
chr1 (33-92)||(14427345-14427404)
chr1 (7-92)||(23989540-23989626)
chr1 (7-91)||(45705824-45705908)
chr1 (31-90)||(51898601-51898660)
chr1 (57-90)||(4888055-4888088)
[»] chr3 (25 HSPs)
chr3 (7-90)||(42100688-42100771)
chr3 (7-92)||(46941051-46941136)
chr3 (7-92)||(40808863-40808948)
chr3 (7-92)||(54246165-54246250)
chr3 (7-91)||(25413680-25413764)
chr3 (7-89)||(54237097-54237179)
chr3 (7-92)||(24688419-24688504)
chr3 (7-92)||(47191043-47191127)
chr3 (7-90)||(45126945-45127028)
chr3 (7-89)||(42394436-42394518)
chr3 (7-92)||(53273701-53273786)
chr3 (7-92)||(9434122-9434207)
chr3 (7-88)||(27748565-27748646)
chr3 (7-94)||(10457909-10457996)
chr3 (7-90)||(36150130-36150213)
chr3 (7-89)||(40480750-40480832)
chr3 (7-88)||(1078229-1078309)
chr3 (7-90)||(34791829-34791912)
chr3 (7-92)||(4190282-4190367)
chr3 (7-88)||(53581875-53581956)
chr3 (7-91)||(25996267-25996351)
chr3 (7-90)||(51757593-51757676)
chr3 (7-93)||(52627994-52628080)
chr3 (7-92)||(29558251-29558336)
chr3 (23-92)||(11064755-11064822)
[»] scaffold0119 (1 HSPs)
scaffold0119 (7-92)||(683-768)
[»] chr6 (18 HSPs)
chr6 (7-92)||(26670026-26670111)
chr6 (7-92)||(7273352-7273437)
chr6 (7-91)||(9698350-9698434)
chr6 (7-92)||(26466797-26466882)
chr6 (7-92)||(7292745-7292830)
chr6 (7-92)||(7367547-7367632)
chr6 (7-88)||(24204004-24204085)
chr6 (7-90)||(13743238-13743321)
chr6 (7-90)||(13748738-13748821)
chr6 (7-90)||(30014343-30014426)
chr6 (7-92)||(3213398-3213483)
chr6 (7-88)||(30735984-30736065)
chr6 (7-92)||(33242401-33242486)
chr6 (7-91)||(21279928-21280012)
chr6 (7-91)||(21293694-21293778)
chr6 (23-91)||(31109255-31109323)
chr6 (7-90)||(33253913-33253996)
chr6 (7-88)||(27441544-27441625)
[»] chr8 (26 HSPs)
chr8 (7-88)||(42295197-42295278)
chr8 (7-92)||(36743500-36743585)
chr8 (7-90)||(11582766-11582849)
chr8 (7-90)||(29705362-29705445)
chr8 (7-91)||(2546995-2547079)
chr8 (10-92)||(30660762-30660844)
chr8 (7-89)||(45397317-45397399)
chr8 (7-92)||(5754901-5754986)
chr8 (7-88)||(30912579-30912660)
chr8 (7-88)||(33630010-33630091)
chr8 (7-92)||(35181514-35181599)
chr8 (7-88)||(42699259-42699340)
chr8 (7-91)||(42197452-42197536)
chr8 (8-90)||(2165981-2166063)
chr8 (7-88)||(29800967-29801048)
chr8 (7-92)||(34304786-34304871)
chr8 (7-88)||(20148762-20148843)
chr8 (7-88)||(26125637-26125718)
chr8 (7-91)||(18066735-18066819)
chr8 (7-91)||(16603643-16603727)
chr8 (7-91)||(31384663-31384747)
chr8 (7-90)||(1375542-1375625)
chr8 (53-90)||(28977146-28977183)
chr8 (7-89)||(16358850-16358933)
chr8 (31-90)||(37038602-37038661)
chr8 (55-92)||(19386635-19386672)
[»] chr7 (31 HSPs)
chr7 (7-91)||(35069720-35069804)
chr7 (7-90)||(24001029-24001112)
chr7 (7-90)||(42538448-42538531)
chr7 (7-92)||(5015393-5015478)
chr7 (7-90)||(5810941-5811024)
chr7 (7-90)||(42972852-42972935)
chr7 (7-92)||(40236917-40237002)
chr7 (7-91)||(9216301-9216384)
chr7 (7-91)||(43317442-43317526)
chr7 (7-88)||(43343641-43343722)
chr7 (7-88)||(44326180-44326261)
chr7 (7-88)||(44416951-44417032)
chr7 (7-91)||(5194248-5194332)
chr7 (7-90)||(31513287-31513370)
chr7 (7-90)||(45326020-45326103)
chr7 (7-88)||(4638216-4638297)
chr7 (7-88)||(10573751-10573832)
chr7 (10-87)||(26898422-26898499)
chr7 (10-81)||(32029837-32029908)
chr7 (7-89)||(31408650-31408732)
chr7 (7-91)||(24280613-24280697)
chr7 (7-67)||(38160596-38160656)
chr7 (7-92)||(41861672-41861759)
chr7 (7-74)||(27393277-27393344)
chr7 (7-92)||(33384868-33384954)
chr7 (7-88)||(16180374-16180454)
chr7 (23-90)||(39998408-39998475)
chr7 (57-91)||(38160661-38160695)
chr7 (7-92)||(27535248-27535333)
chr7 (31-92)||(35522999-35523060)
chr7 (38-91)||(47279745-47279798)
[»] chr4 (37 HSPs)
chr4 (7-94)||(33703137-33703224)
chr4 (7-92)||(1771283-1771368)
chr4 (7-92)||(25051691-25051776)
chr4 (8-92)||(28988471-28988555)
chr4 (7-90)||(35017733-35017815)
chr4 (8-90)||(27316731-27316813)
chr4 (7-89)||(41878407-41878489)
chr4 (7-88)||(43949818-43949900)
chr4 (7-92)||(27864562-27864647)
chr4 (7-92)||(28982839-28982924)
chr4 (7-92)||(55966363-55966448)
chr4 (10-90)||(27550309-27550389)
chr4 (7-94)||(711956-712043)
chr4 (7-88)||(39631102-39631184)
chr4 (7-88)||(3756263-3756344)
chr4 (7-92)||(23035978-23036063)
chr4 (7-88)||(43514703-43514784)
chr4 (10-90)||(12496956-12497036)
chr4 (7-91)||(32728356-32728440)
chr4 (7-91)||(48463467-48463551)
chr4 (7-90)||(17619169-17619252)
chr4 (7-88)||(27893859-27893940)
chr4 (7-87)||(23204795-23204875)
chr4 (7-90)||(55272393-55272476)
chr4 (10-92)||(960890-960972)
chr4 (7-88)||(35037007-35037088)
chr4 (7-88)||(43735744-43735825)
chr4 (7-91)||(48435596-48435680)
chr4 (8-91)||(21687005-21687088)
chr4 (23-90)||(41847971-41848038)
chr4 (7-90)||(45490330-45490413)
chr4 (7-88)||(31680904-31680985)
chr4 (33-92)||(46827749-46827808)
chr4 (7-88)||(41327560-41327641)
chr4 (10-91)||(49229684-49229765)
chr4 (31-91)||(50526088-50526148)
chr4 (39-91)||(30189272-30189324)
[»] chr2 (28 HSPs)
chr2 (7-90)||(1750414-1750497)
chr2 (7-92)||(12302270-12302355)
chr2 (7-91)||(30838631-30838715)
chr2 (7-92)||(43335780-43335865)
chr2 (7-90)||(16096747-16096830)
chr2 (11-93)||(33229298-33229381)
chr2 (7-89)||(19047158-19047240)
chr2 (7-92)||(43114555-43114640)
chr2 (8-88)||(43490419-43490499)
chr2 (7-90)||(12415477-12415560)
chr2 (7-90)||(12427537-12427620)
chr2 (7-88)||(11825671-11825752)
chr2 (7-89)||(34817793-34817875)
chr2 (7-92)||(16803966-16804051)
chr2 (7-92)||(16843248-16843333)
chr2 (7-88)||(41281991-41282072)
chr2 (7-90)||(13780752-13780835)
chr2 (7-92)||(966851-966936)
chr2 (7-92)||(4764743-4764828)
chr2 (7-91)||(18491704-18491788)
chr2 (7-88)||(6518486-6518566)
chr2 (7-92)||(34895758-34895843)
chr2 (7-88)||(4299437-4299518)
chr2 (7-88)||(8896600-8896681)
chr2 (7-91)||(42026766-42026852)
chr2 (55-90)||(42849911-42849946)
chr2 (7-52)||(4451967-4452012)
chr2 (47-88)||(7070418-7070459)
[»] chr5 (14 HSPs)
chr5 (7-92)||(18033980-18034065)
chr5 (7-92)||(33801467-33801552)
chr5 (7-90)||(2614666-2614749)
chr5 (7-90)||(22512305-22512388)
chr5 (7-90)||(41334680-41334763)
chr5 (7-92)||(7617131-7617216)
chr5 (7-90)||(32473411-32473494)
chr5 (15-90)||(33855068-33855143)
chr5 (8-88)||(25915006-25915085)
chr5 (7-88)||(5256997-5257078)
chr5 (7-91)||(17208073-17208157)
chr5 (7-92)||(38470577-38470662)
chr5 (7-92)||(30622736-30622820)
chr5 (7-91)||(39122450-39122533)
[»] scaffold0187 (2 HSPs)
scaffold0187 (7-91)||(14205-14289)
scaffold0187 (7-91)||(24533-24617)
[»] scaffold0038 (1 HSPs)
scaffold0038 (7-89)||(112656-112738)
[»] scaffold0385 (1 HSPs)
scaffold0385 (7-92)||(11249-11334)
[»] scaffold0157 (1 HSPs)
scaffold0157 (10-90)||(23441-23521)
[»] scaffold0100 (1 HSPs)
scaffold0100 (7-90)||(35473-35556)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-88)||(45736-45817)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 5162193 - 5162033
Alignment:
Q  91 ttctgctaaacatagacattgaaaattgtttttcatcaatttgattgaaaagacatactctagacactataaattatgtttttctctccctactgttaaa 190  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5162193 ttctgataaacatagacattgaaaattgtttttcatcaatttgattgaaaagacatactctagacactataaattatgtttttctctcccttctgttaaa 5162094  T
Q  191 aattattatatcttaaaagctaattccaaatagctatttctttttcaacgaaaatctagtc 251  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5162093 aattattatatctcaaaagctaattccaaatagctatttctttttcaacgaaaatctagtc 5162033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 43571103 - 43571186
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43571103 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 5489859 - 5489774
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  5489859 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcctt 5489774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 48498979 - 48499065
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttc 93  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||  |||||| ||||||| |||||||||||||||||||||||    
T  48498979 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttccttc 48499065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 44112760 - 44112675
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  44112760 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 44112675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 38336001 - 38335918
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||| ||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||    
T  38336001 gtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 48119711 - 48119628
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||    
T  48119711 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 35003377 - 35003294
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||  |||||| || ||||||||||||||||||||||||||    
T  35003377 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 37814861 - 37814778
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||| ||||| |||| ||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  37814861 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 4401411 - 4401329
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||| |||| ||||||||||| ||||||    
T  4401411 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttt 4401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 24769523 - 24769601
Alignment:
Q  14 gaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||| |||||||||||||| ||||||||||||||||  |||||| |||||| |||||||||| ||||||||||||    
T  24769523 gaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcctt 24769601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 41065236 - 41065152
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| |||||  ||||||||||||||||||||||   |||||| || |||||||||||||||||||||||||||    
T  41065236 gtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcct 41065152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 50448280 - 50448360
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||||| |||||||||||||| |||  |||||||||||  |||||| ||||||| ||||||||||||||||||||    
T  50448280 agatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 50448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 750323 - 750406
Alignment:
Q  8 tgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||| |||  ||||||||||| || |||||||||||||||| ||||||||||  ||||||||||| |||||||||||||    
T  750323 tgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcct 750406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 45639749 - 45639834
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||  | |||| || ||||| ||||||||||||||||||||||    
T  45639749 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcctt 45639834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 38113212 - 38113296
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| ||||| ||  ||||||||||||||||||||  |||||| || |||||||||||||| ||||||||||||    
T  38113212 gtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcct 38113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 45427762 - 45427846
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| ||||| |||||||||||||| |||||||||  |||||| || |||| ||| ||||||||||||||||||    
T  45427762 gtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcct 45427846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 26585543 - 26585460
Alignment:
Q  9 gagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||| |||||||||||||| ||||||||||||||||||||   ||||| || |||||  ||||||| |||||||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcctt 26585460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 46168466 - 46168383
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||| |||||||| |||||||||||  | | || || ||||||||||||||||||||||||||    
T  46168466 gtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 2497579 - 2497660
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| ||||||||| ||||  |||||||||||||||   |||| ||||||| |||||| ||||||||||||    
T  2497579 gtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 7447908 - 7447828
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||  ||||||||  |||| |||||| ||||||||| | |||||||||||||| |||||||||||||||||    
T  7447908 gtgagatgaacttatcaaaatatctgtaatacatggg-tgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 14427404 - 14427345
Alignment:
Q  33 taatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||| ||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 14427345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 23989540 - 23989626
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaa-gggtgttcatgtaacattttcctt 92  Q
    ||||||| || |||| |||||||||||||| ||| |||| ||||||   ||||| ||||||| ||||||||||||||||||||||||    
T  23989540 gtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcctt 23989626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 45705908 - 45705824
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||  ||||| ||| |||||||||| |||||||||    |||| || |||||||||||||| ||||||||||||    
T  45705908 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttcct 45705824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 51898660 - 51898601
Alignment:
Q  31 cctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||| |||||||||||||||| |  || ||| ||||||||||||| ||||||||||||||    
T  51898660 cctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 51898601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 4888088 - 4888055
Alignment:
Q  57 tgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| ||||||||||||||||||    
T  4888088 tgtaggaataaagggcgttcatgtaacattttcc 4888055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 42100771 - 42100688
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42100771 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 46941136 - 46941051
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46941136 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcctt 46941051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 40808948 - 40808863
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  40808948 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcctt 40808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 54246165 - 54246250
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54246165 gtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcctt 54246250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 25413764 - 25413680
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25413764 gtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 25413680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 54237179 - 54237097
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  54237179 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 24688419 - 24688504
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  24688419 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcctt 24688504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 47191043 - 47191127
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||  |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47191043 gtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 47191127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 45126945 - 45127028
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| | |||| |||||||||||||| ||||||||||||||    
T  45126945 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42394436 - 42394518
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  42394436 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 53273701 - 53273786
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||| | ||||||| |||||||||||||    
T  53273701 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcctt 53273786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 9434207 - 9434122
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||   ||||| || ||||||||||||||||||||||||||||    
T  9434207 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcctt 9434122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 27748646 - 27748565
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||||||||| |||  |||||| ||||||||||| ||||||| |||||||||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 10457909 - 10457996
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttct 94  Q
    ||||||| || |||| ||||||||| ||||||||||||||||||||  |||||| || |||| |||||||||||||||||||||||||    
T  10457909 gtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttccttct 10457996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 36150213 - 36150130
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| ||||||||||| || ||| ||||||| |||| |||||| ||||||||||| |||||||||||||||||    
T  36150213 gtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 40480832 - 40480750
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    ||||||||||||||| |||||||||||||| ||| || ||||||||| ||  || ||||||||||||||||||||||||||||    
T  40480832 gtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 1078309 - 1078229
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||| ||| ||||||||| |||| |||  |||||||||||||||| |||||||||||||||||||||||||||||    
T  1078309 gtgagatgaacctacaaaaatatcc-taatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttt 1078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 34791912 - 34791829
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| ||| |||||| ||||||||||||| ||| ||||||  |||||| || ||||||||||||||||||||||||||    
T  34791912 gtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 4190282 - 4190367
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| |||||||| ||||| |||  ||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  4190282 gtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 4190367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 53581875 - 53581956
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||  |||||||||||||| ||| || |||||||||  ||||| |||||||| ||||||||||||||||||    
T  53581875 gtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 25996351 - 25996267
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| ||||| ||| ||||  |||||||||||||| || |||| || |||||||||||||||||||||||||||    
T  25996351 gtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttcct 25996267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 51757676 - 51757593
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||||||||| ||| ||||||||| ||||||||||  |||||| || ||||||||||| |||||| |||||||    
T  51757676 gtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 52627994 - 52628080
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttc 93  Q
    |||||||||| |||| ||||||| | ||||||||| ||||||||||  | |||| || ||||||||||||| |||||||||||||||    
T  52627994 gtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttccttc 52628080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 29558251 - 29558336
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| || |||| ||||||  || |||||||||||||| |||| ||||||||||||||||| ||||||| |||||    
T  29558251 gtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacattgtcctt 29558336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 11064755 - 11064822
Alignment:
Q  23 aaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||| |||| |||| ||||||||||||||||||| ||||||| | ||||||  |||||||||||||    
T  11064755 aaaatatctctaaagcatagggtgtacaatgaggtgtatgaataaatgatgttca--taacattttcctt 11064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 768 - 683
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  768 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 26670026 - 26670111
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26670026 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 26670111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 7273352 - 7273437
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7273352 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcctt 7273437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 9698350 - 9698434
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  9698350 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 9698434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 26466882 - 26466797
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||| ||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  26466882 gtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcctt 26466797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 7292830 - 7292745
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||| ||||||| ||||||| |||||||||||||||    
T  7292830 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcctt 7292745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 7367632 - 7367547
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||| |||||||||||||    
T  7367632 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcctt 7367547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 24204004 - 24204085
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||  |||||||||||||| |||||||||||||||||||    
T  24204004 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 13743238 - 13743321
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||  | |||| ||||||| |||||||||||||||||||||    
T  13743238 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 13748738 - 13748821
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||  | |||| ||||||| |||||||||||||||||||||    
T  13748738 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 30014426 - 30014343
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| ||||||| |||||| |||||| |||| |||| | ||||||||||||||||||||||||||||||||||    
T  30014426 gtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 3213483 - 3213398
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||| ||||| |||| ||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  3213483 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcctt 3213398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 30736065 - 30735984
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||| ||||| |||| ||||||||||| ||||||||||||||  ||||||||||||||||||    
T  30736065 gtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 33242486 - 33242401
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||| |||| ||||||||||||||| ||||||| || |||| |||||||||||||||||||||||    
T  33242486 gtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcctt 33242401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 21280012 - 21279928
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| |||||||||||||| |||||| ||| |||||   ||||| |||||||||||||||||||||||||||||    
T  21280012 gtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcct 21279928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 21293694 - 21293778
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||| ||||| |||| ||||||||| |||| ||||||||||||| |||  |||| |||||||||||||| |||||||||||||||    
T  21293694 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcct 21293778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 31109255 - 31109323
Alignment:
Q  23 aaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||||| ||||||||||||| |||| | |||| || |||||||||||||||||||||||||||    
T  31109255 aaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcct 31109323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 33253996 - 33253913
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| || || ||||||||||||||||||||||||  |||||  || |||| |||||||||||||||||||||    
T  33253996 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 27441625 - 27441544
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||||||| |||| ||| || ||||||||  |||||| || ||||||||||||||||||||||||    
T  27441625 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 42295278 - 42295197
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42295278 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 36743500 - 36743585
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  36743500 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcctt 36743585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 11582849 - 11582766
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11582849 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 29705445 - 29705362
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  29705445 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 2547079 - 2546995
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||  |||||| ||||||| |||||||||||||||||||||    
T  2547079 gtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 2546995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 30660762 - 30660844
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||||| |||||||||||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  30660762 agatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcctt 30660844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 45397399 - 45397317
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    ||||||||||||||| |||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  45397399 gtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 5754986 - 5754901
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||| | |||||||||||| |||||||||||||||||||||||    
T  5754986 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcctt 5754901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 30912579 - 30912660
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||| ||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||    
T  30912579 gtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 33630010 - 33630091
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||||||| || |||||||||||| |||||||||||    
T  33630010 gtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 35181599 - 35181514
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  35181599 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 35181514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 42699340 - 42699259
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| ||||||||| |||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  42699340 gtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 42197452 - 42197536
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| ||| | |||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  42197452 gtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcct 42197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 2165981 - 2166063
Alignment:
Q  8 tgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||||||| |||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||||||| |||||||    
T  2165981 tgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 29800967 - 29801048
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| | |||| ||||||| |||||| ||||||||||||    
T  29800967 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 34304871 - 34304786
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||  |||||| || |||||| |||||||||||||||||||||    
T  34304871 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcctt 34304786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 20148843 - 20148762
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| ||||||||||||||  ||| ||||||||||| | |||| |||||||||||||| ||||||||||||    
T  20148843 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 26125718 - 26125637
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||   |||| |||||||||||||| ||||||||||||    
T  26125718 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 18066735 - 18066819
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||    |||| || |||||||||||||||||||||||||||    
T  18066735 gtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcct 18066819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 16603643 - 16603727
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| ||||| ||  |||||||||||||||| ||| ||||||| || |||||||||| ||||||||||||||||    
T  16603643 gtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcct 16603727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 31384747 - 31384663
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||    |||| ||||||||||||||||||||| | ||||||    
T  31384747 gtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttcct 31384663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 1375625 - 1375542
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||| || |||| ||||||||||||||  ||||||||||||||  |||||| ||||||| ||||||||||||| |||||||    
T  1375625 gtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 28977183 - 28977146
Alignment:
Q  53 gaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28977183 gaggtgtaggaataaagggtgttcatgtaacattttcc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 16358850 - 16358933
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttc-atgtaacattttc 89  Q
    |||||||||| |||  ||||||| | ||||||||||| ||||||||  |||||| || |||||||| ||| |||||||||||||    
T  16358850 gtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaacattttc 16358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 37038602 - 37038661
Alignment:
Q  31 cctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||| |||||||||||||||| |  || ||| ||||||||||||| ||||||||||||||    
T  37038602 cctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 37038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 19386635 - 19386672
Alignment:
Q  55 ggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||| || ||||||||||||||||||||||||||||    
T  19386635 ggtgtatgattaaagggtgttcatgtaacattttcctt 19386672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 35069804 - 35069720
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35069804 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcct 35069720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 24001029 - 24001112
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  24001029 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 42538448 - 42538531
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  42538448 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 5015478 - 5015393
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||  |||||| ||||||| ||||||||||||||||||||||    
T  5015478 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcctt 5015393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 5810941 - 5811024
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||  ||||||||||||||  || |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  5810941 gtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 42972935 - 42972852
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||  ||||||||||||||| |||||| ||||||||||||    
T  42972935 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 40237002 - 40236917
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||  | |||| || ||||||||||||||||||||||||||||    
T  40237002 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcctt 40236917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 9216384 - 9216301
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||  | | |||||||||||||||||||||||||||||||||    
T  9216384 gtgagatgaacttaccaaaatatctctaatgcatggg-tgtacaataggatataggaataaagggtgttcatgtaacattttcct 9216301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 43317526 - 43317442
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||  ||||||||||||| |||| || |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  43317526 gtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcct 43317442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 43343641 - 43343722
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||  ||||||| |||||| | |||||||||||||||||    
T  43343641 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 44326261 - 44326180
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| ||||||||||||||  ||| ||||||||||| | |||| |||||||||||||| ||||||||||||    
T  44326261 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 44416951 - 44417032
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||  ||||||| |||||| | |||||||||||||||||    
T  44416951 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 5194248 - 5194332
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||  ||||||||| |||  ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  5194248 gtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcct 5194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 31513370 - 31513287
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||| ||||||||||||| ||||||  |||||| || ||||| ||||||||||||||||||||    
T  31513370 gtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 45326103 - 45326020
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||| | |||| ||||||| |||||| |||||||| |||||    
T  45326103 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 4638216 - 4638297
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| ||||||||| ||||  ||||||||||||||   ||||| ||||||| |||||||||||||||||||    
T  4638216 gtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 10573832 - 10573751
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||||| |||||| |||||||||||||||  | |||| |||||||||||||| ||||||||||||    
T  10573832 gtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 26898422 - 26898499
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattt 87  Q
    |||||||||||| |||||||||||||| |||||  ||||||||  |||||| ||||||| ||||||||||||||||||    
T  26898422 agatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 32029837 - 32029908
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgta 81  Q
    ||||||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||  ||||| |||||    
T  32029837 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 31408650 - 31408732
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    |||| ||||| |||| ||||||||| ||||||||||| ||||||||   ||||| || |||||||||||||||||||||||||    
T  31408650 gtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 24280613 - 24280697
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| |||||||  ||| |||||||| |||| |||  |||||| |||||||||||||||| |||||||||||||    
T  24280613 gtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcct 24280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 38160596 - 38160656
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataa 67  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| ||||||    
T  38160596 gtgagatgaagttactaaaatatccctaatacatggggtgtacaatggagtgtaagaataa 38160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 41861759 - 41861672
Alignment:
Q  7 gtgagatgaacttactaaaatatcccta--atgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||| ||||||| |||||||| |||  || ||| ||||||| |||  |||||| |||||||||||||||||||||||||||||||    
T  41861759 gtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcctt 41861672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 27393277 - 27393344
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgt 74  Q
    ||||||||||||||| |||||||||||||| ||| | |||||||||  | ||||||||||||||||||    
T  27393277 gtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 33384954 - 33384868
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaat-gaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| |||||||||||||| || |||||| | |||||| || |||| | |||||||||||||||||||||    
T  33384954 gtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttcctt 33384868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 16180374 - 16180454
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| |||||||   |||| | |||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  16180374 gtgagatgaatttaccaaaatatttataatacgtggggtgtacaatg-ggtgtaggaataaatggtgttgatgtaacatttt 16180454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 39998475 - 39998408
Alignment:
Q  23 aaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||||||| |||||||||||||||  | |||| || ||||  ||||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 91
Target Start/End: Original strand, 38160661 - 38160695
Alignment:
Q  57 tgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||||||||||||||||||||||||||||    
T  38160661 tgtaggaataaagggtgttcatgtaacattttcct 38160695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 27535248 - 27535333
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||  |||  ||||| |||||||||   ||||| || ||||||||||||||||||||||||||||    
T  27535248 gtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcctt 27535333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 35522999 - 35523060
Alignment:
Q  31 cctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||| ||||||||||||| |  || | |||||||| |||||| ||||||||||||||||    
T  35522999 cctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacattttcctt 35523060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 47279745 - 47279798
Alignment:
Q  38 catggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||||||||| | |||| ||||||||||| || |||||| ||||||||    
T  47279745 catggggtgtacaatgggatgtatgaataaagggtatttatgtaatattttcct 47279798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 33703224 - 33703137
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttct 94  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||    
T  33703224 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttccttct 33703137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 1771283 - 1771368
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1771283 gtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcctt 1771368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 25051776 - 25051691
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  25051776 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcctt 25051691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 28988555 - 28988471
Alignment:
Q  8 tgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||| |||  ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28988555 tgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcctt 28988471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 35017815 - 35017733
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  35017815 gtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 27316731 - 27316813
Alignment:
Q  8 tgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  27316731 tgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 41878489 - 41878407
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    ||||||||||||||  ||||||||||||||| || ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  41878489 gtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 43949818 - 43949900
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  43949818 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 27864647 - 27864562
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| | |||| ||||||| |||||| ||||||||||||||||    
T  27864647 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcctt 27864562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 28982839 - 28982924
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  28982839 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcctt 28982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 55966363 - 55966448
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||| | |||| |||||||||||||| ||||||||||||||||    
T  55966363 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcctt 55966448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 27550389 - 27550309
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||||| |||||||||||||| |||| |||||||||||  |||||| ||||||||||||||||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 712043 - 711956
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttct 94  Q
    |||||||||| |||| ||||||||| |||||||| |||||||||||  |||||| || ||||||||||||||||||||||||||||||    
T  712043 gtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccttct 711956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 39631184 - 39631102
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  39631184 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 3756263 - 3756344
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||  |||||| || ||||||||||||||||||||||||    
T  3756263 gtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 23036063 - 23035978
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| ||||||||||||||  || |||||||||||  ||||||||||||||||  ||||||||||||||||||||    
T  23036063 gtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcctt 23035978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 43514703 - 43514784
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| |||||| ||||||| ||||  ||||||||||  |||||||||||||||||||||||||||||||||    
T  43514703 gtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 12497036 - 12496956
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||||| |||||||| ||||| |||||| |||||||||  ||||||||||||||||||||||| |||||||||||    
T  12497036 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 32728440 - 32728356
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||  |||||| || |||||| ||||||||||||||||||||    
T  32728440 gtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 32728356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 48463467 - 48463551
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||  |||| ||||||| |||||| |||||||||||||||    
T  48463467 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcct 48463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 17619169 - 17619252
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||  |||||| || |||| |||||||||||||||||||||    
T  17619169 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 27893859 - 27893940
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||| | |||| ||||||| |||||| ||||||||||||    
T  27893859 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 23204795 - 23204875
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattt 87  Q
    |||| |||||||||| |||||||||||||| ||| || ||||||||| | ||||||||||||| |||||||||||||||||    
T  23204795 gtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 55272393 - 55272476
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||   ||||| || |||||| |||||||||||||||||||    
T  55272393 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 960890 - 960972
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||| |||| ||||| ||||||||| || |||||||||||   ||||| || ||||||||||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcctt 960972  T

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Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 35037088 - 35037007
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||   ||||| |  ||||||||| ||||||||||||||    
T  35037088 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

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Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 43735825 - 43735744
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||  |||||||| ||||| |||||  |||| |||||| |||||||||||||| ||||||||||| |||||    
T  43735825 gtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

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Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 48435596 - 48435680
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| || || ||||||||||||||||||||||||  |||||  || |||| ||||||||||||||| ||||||    
T  48435596 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcct 48435680  T

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Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 21687088 - 21687005
Alignment:
Q  8 tgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||||||||||  ||||| |||  | |||| |||| ||||||  |||||||| ||||||||||||||||||||    
T  21687088 tgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttcct 21687005  T

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Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 41848038 - 41847971
Alignment:
Q  23 aaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||| || ||||||||||||||||||||||||||||  ||| ||||| ||||| |||||||||||||    
T  41848038 aaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

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Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 45490330 - 45490413
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||||||| |||||||||| |||| ||||||||||  | ||||  ||||||  ||||||||||||||||||||    
T  45490330 gtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

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Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 31680985 - 31680904
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||||   |||| ||||||| |||||| | ||||||||||    
T  31680985 gtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

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Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 46827749 - 46827808
Alignment:
Q  33 taatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||| |||||||||||   ||||| || ||||||||||||||||||||||||||||    
T  46827749 taatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcctt 46827808  T

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Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 41327560 - 41327641
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||| ||| || |||||  ||||||||||| |||||  |||||||||||||  ||||||||||||    
T  41327560 gtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

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Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 49229684 - 49229765
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||| |||| | ||||||| |||||||||  |||||||||  |||||| || |||||| ||||||| ||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcct 49229765  T

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Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 50526148 - 50526088
Alignment:
Q  31 cctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||| |||||||||||||||| |  || ||| ||||||||||||| |||||||||||||||    
T  50526148 cctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcct 50526088  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 30189324 - 30189272
Alignment:
Q  39 atggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||| |||  ||||  ||||||| ||||||||||||||||||||||    
T  30189324 atggggtgtacgatggagtgtgtgaataaatggtgttcatgtaacattttcct 30189272  T

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Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 1750497 - 1750414
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1750497 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

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Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 12302270 - 12302355
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  12302270 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcctt 12302355  T

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Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 30838715 - 30838631
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  30838715 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcct 30838631  T

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Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 43335780 - 43335865
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| | ||||||| |||||||||||||    
T  43335780 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcctt 43335865  T

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Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 16096830 - 16096747
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||| |||| || |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  16096830 gtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 33229381 - 33229298
Alignment:
Q  11 gatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaat-aaagggtgttcatgtaacattttccttc 93  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttttcttc 33229298  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 19047240 - 19047158
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  19047240 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 43114640 - 43114555
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  43114640 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 43114555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 43490419 - 43490499
Alignment:
Q  8 tgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||||||| |||||||||||||| ||| | |||||||||| | ||||||||||||||||||||||||||||||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 12415477 - 12415560
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||| || |||| ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  12415477 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 12427537 - 12427620
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||| || |||| ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  12427537 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 11825671 - 11825752
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||  |||||| || ||||||||||||||||||||||||    
T  11825671 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 34817793 - 34817875
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    |||||||||| |||| ||||| | | || ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  34817793 gtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 16804051 - 16803966
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||  ||||| ||||||||||||||| ||||||||  |||||| || ||||||||||||||||||||||||||||    
T  16804051 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 16803966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 16843333 - 16843248
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||  ||||| ||||||||||||||| ||||||||  |||||| || ||||||||||||||||||||||||||||    
T  16843333 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 16843248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 41281991 - 41282072
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||  ||||| ||||||||||||||||||||||||  |||||| || ||||||||||||||||||||||||    
T  41281991 gtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 13780752 - 13780835
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||  ||||||||||||||| |||||||||||||||||||||  |||||||  ||||| ||||||||||||||    
T  13780752 gtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 966851 - 966936
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| ||||  | | ||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||||    
T  966851 gtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 966936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 4764743 - 4764828
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| |||||||   |||| |||||||||||||||  |||||||||||||| |||||| ||||||||||||||||    
T  4764743 gtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcctt 4764828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 18491788 - 18491704
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| ||||| | | ||||||||| ||||||||||  |||||| || |||||||||||||||||||||||||||    
T  18491788 gtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 18491704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 6518486 - 6518566
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||   ||||| || |||| |||||||||||||||||||    
T  6518486 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 34895758 - 34895843
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||| |||| || || ||||||||||||||||||||||||  |||||  || |||| ||||||||||||||| |||||||    
T  34895758 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcctt 34895843  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 4299437 - 4299518
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||| ||  |||||||||| |||||||||  |||||| || |||||||||||||| |||||||||    
T  4299437 gtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 8896600 - 8896681
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||||| |||| || || ||||||||||||   |||  |||||||||||||||||||||||||||    
T  8896600 gtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 42026852 - 42026766
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaa--gggtgttcatgtaacattttcct 91  Q
    |||||||||| || | ||||||||||||||||  ||| |||||||||   |||| |||||||  |||||||||||||||||||||||    
T  42026852 gtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcct 42026766  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 42849911 - 42849946
Alignment:
Q  55 ggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  42849911 ggtgtaggaataaagggtgttcatgtaacattttcc 42849946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 4451967 - 4452012
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaat 52  Q
    |||||||||| |||| ||||||||||||||||||  ||||||||||    
T  4451967 gtgagatgaatttaccaaaatatccctaatgcatatggtgtacaat 4452012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 7070459 - 7070418
Alignment:
Q  47 tacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    ||||||| | |||| |||||||||||||||||||||||||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 18034065 - 18033980
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  18034065 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcctt 18033980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 33801552 - 33801467
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  33801552 gtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcctt 33801467  T

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Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 2614666 - 2614749
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  2614666 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 22512388 - 22512305
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  22512388 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 41334680 - 41334763
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  41334680 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 7617216 - 7617131
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||    
T  7617216 gtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcctt 7617131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 32473411 - 32473494
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||    
T  32473411 gtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 33855068 - 33855143
Alignment:
Q  15 aacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    ||||||| ||||| | |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 25915006 - 25915085
Alignment:
Q  8 tgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| ||| ||||||| | |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25915006 tgagatgaacctacaaaaatattc-taatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 5257078 - 5256997
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||| | |||| ||||||| |||||| ||||||||||||    
T  5257078 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 17208157 - 17208073
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| ||||| ||| |||||||||||||||||||| | ||||| || ||||||||||||| |||||||||||||    
T  17208157 gtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcct 17208073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 38470662 - 38470577
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    |||| ||||| |||| ||||||||| |||| ||||||||||||||||   |||| |||||||||||||| ||||||||||||||||    
T  38470662 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcctt 38470577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 30622736 - 30622820
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||| || |||| ||||||||| ||||||||||| | ||||||  |||||| || |||||| |||||||||||||||||||||    
T  30622736 gtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttcctt 30622820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 39122450 - 39122533
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    |||||||||| |||| ||||||| |||||| |||||| |||  ||| || |||| ||||||| ||||||||||||| | ||||||    
T  39122450 gtgagatgaatttaccaaaatattcctaatacatggg-tgtctaattagatgtatgaataaaaggtgttcatgtaatagtttcct 39122533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 14205 - 14289
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14205 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 14289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 24533 - 24617
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 91  Q
    ||||||||||||||| |||||||||||||| ||| || ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24533 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 24617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 112738 - 112656
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 89  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  112738 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 11334 - 11249
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 92  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||| |||||| |||||||| |||||||||| |||||||||||    
T  11334 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcctt 11249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 23441 - 23521
Alignment:
Q  10 agatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||||| |||||||| ||||| |||||| |||||||||  ||||||||||||||||||||||| |||||||||||    
T  23441 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 35473 - 35556
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 90  Q
    |||||||||| |||| || || ||||||||||||||||||||||||  |||||| || |||| |||||| ||||||||||||||    
T  35473 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 45736 - 45817
Alignment:
Q  7 gtgagatgaacttactaaaatatccctaatgcatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 88  Q
    |||||||||| |||| ||||||||| |||| ||| || ||||||||  |||||| || ||||||||||||||||||||||||    
T  45736 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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