View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493_low_108 (Length: 228)
Name: NF0493_low_108
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493_low_108 |
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Alignment Details
Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8293667 - 8293547
Alignment:
| Q |
1 |
atacaaaacgcagcaacaaaatatctggaatcagagaaattaacacggaagagaagaga-aaaataaatggacacataagatttaccagtttcaatcaat |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
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| T |
8293667 |
atacaaaacgcagcaacaaaatatctggaatcagagaaattaacacggaagagaagagaaaaaataaatggacacataagatttaccagtttcagtcaat |
8293568 |
T |
|
| Q |
100 |
tgtaagcagctccacaggttc |
120 |
Q |
| |
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||||||||||||||||||||| |
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|
| T |
8293567 |
tgtaagcagctccacaggttc |
8293547 |
T |
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